Clc05G16830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G16830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	multiple organellar RNA editing factor 9, chloroplastic
Location	ClcChr05: 24847821 .. 24850309 (-)
RNA-Seq Expression	Clc05G16830
Synteny	Clc05G16830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCTCATCTTCTTCGTCTTAGTTTTTTGCGCTATCTTCTTCGTCTCATTCTGTAATGCTAATGGCTACCAATCTCTCCTTTTCTCCTCAATCCCTAATTCCACTTCAAAAGCCTTCGCTCTTACCGCGCGTTCAACTCCGTCACTTCCTTCAGCTCAACTCAGTGAGTCGGATTTCGACTGCTCGTCTTCATTCCAGCTCTCAATCGGGGGTTTTGGTTCGAGCCGCTTTGGATAGCGATTACTCGTCGAAGAGGAGCAGTAGCAATGAACAGAGGGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTCATGGAGTTCCCTAAAGATCCTGCTCCAACCAGGGAACAGATGATTGATACCTACCTCAACACTCTTGCTACTGTATTGGGAAGGTTTTTTTCTCTCTATCTCTCAATCTCTCTCTATCTGTATATGCTCGTTTTCATTTCGAATGTTTGTTTGAGAGTTCCATTTGAGTAAAGGATTTAAGAATCTCTGCACGTATGTGGTGCTTGGAAATTGATATGTCGATATGAAAGCGTCTTGAGTTGTGGTAAGTAGGCATTAGGTAACAGGTGGGAGTTTCGCGAGGCCTGGAGTTTCGTTTCTGAAGTGAATTAAGAACAAGAGGTTTTTGTGCTATATGTTTCTTTGTTCTCTGGGCTGTTCTTTGCTTCTTTTACTTTTGGAGCAGCTCCTATGATAAGAGAAATTTTTATTATTTTTTTAAAATTTTAAGAATTCAAAGTATTGACCTTTGAAATGATAATGAATAACTTATTCACATAAATATATGTGAGAGAAATTACCGAATGTATTTTGAACCTACCCTCGACATTATCCAAGGTATCACAAAATTAAATGTTGAGTGACCTTTAGACACTTTGGGGAAGTTTTGGAGTGTGAGTTATAAGTAGTTTGTGGGTTATAATAGTACATGTTTGGGGTGCACTATTTTTGTATGGGTAGGAAAAATATGGTAACAAAGAGAGAGAGAGAAAGGATGGGTGGAAAACAGTAAATATTGTAGTATAGAGGATTTTGAAATAGTTTTTACTATACTTAATTGAACGTTATAAATAATTGTAAACACTACTATATATTTGGAGAGGGATATGATAGCTCACTCCGCCAACTTCAAGTTGGGCGCCCAAACACCTCCTTTAGCTTAAATTACAAATTTAGTTTTATGTGTATTTAGTCTTGAACTTCATACTTACAAATTTAGTCTTTGAGATTTTGAATTTTTAAAATTAACAGAACTATTAGTTGCAAAATTGAAAGTTTAGAGTTCCATTAGACACAATTTACAAATCTATATCTAAATCTCTTTTTTCTTTTTTCTTTTTTGTCAAAAACATATCCAATACCTCAAAGTTTAACCTAAGATTGTAGATATAATTCAAAAGTTCATGGACAAGCTAATTATTAGTGCCAAATTAATCTTAAAAACTTAGAGATGTGAACATTCTGCATTTTAATAAATCGTTGGTCAAGGATATTTTCATCTCTTATGTAAAAATTTTCCTGGAAGCAGCATGGAAGAAGCCAAGAAAAACATGTATGCTTTCAGCACCACCACCTACACAGGATTCCAATGCACAGTGTCCGAGGAAACATCCGAGAAATTTAAGGGTAGGTGTCCGTTTATGAATTTTTCTTGGAAGTCCTGTTCTGACAGGTGAGCTGAGAGATGCTAATAGAACCTTTCCATTGCAGGATTACCCGGAGTTCTATGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTTGGGTTTCTATCCTCTCTTTATCTTATTAGTTATTATTACCCTGTTACTTGAAGATGGTATTTTCTGTTTGCAAAAACCACAGTAGGATTAGGAGCCTCTTTTCACTAGTTTTGTCCAGATTATCTTAGTTTCTTGTTGTTAACTTATAGGTGACAAGTATATAAATGGGGAGATAATTCCATCCAAGTATCCTGTTTATGAACCGAAGAAACGAAGAGAAACAAAATATGAAAGTAGGAGATATGAAAGGAAAAGGGATGGCCCTCCTCCTGAACAACGAAGGCCAAGACCACAAGCAACTCGAACAGAATCAAATTCAGGATAAGGTAGGGCAGTGATTTTCCTAATATTATTTGCAATGCTTGCATTGGAAAATAGAATGTTTTTGTTCACTTCCCTTTGCAATGCATTAGTTTATGACTTAAGATTGTGCTTTGAACTAGAACTACTTAGGAAGATAGATGGAGGTACTCCAGGGACTTTCATATACTGTTCTTGGAATTTTGTACATGCTATGCTGTAGTTCATGTTCATTCTGGAAAGGAATCTTGTACCGTGACGTGACCTTGTAGCTCAGATATAATTGGAGAATATATATGGCTTAGAACAGTTCTTTCTTTAACTACACACATTCATCACAGAAGAATTTAGAGCAGTTGTTATCAAGCTTTTGAATAGTGAGG

mRNA sequence

AAAACCTCATCTTCTTCGTCTTAGTTTTTTGCGCTATCTTCTTCGTCTCATTCTGTAATGCTAATGGCTACCAATCTCTCCTTTTCTCCTCAATCCCTAATTCCACTTCAAAAGCCTTCGCTCTTACCGCGCGTTCAACTCCGTCACTTCCTTCAGCTCAACTCAGTGAGTCGGATTTCGACTGCTCGTCTTCATTCCAGCTCTCAATCGGGGGTTTTGGTTCGAGCCGCTTTGGATAGCGATTACTCGTCGAAGAGGAGCAGTAGCAATGAACAGAGGGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTCATGGAGTTCCCTAAAGATCCTGCTCCAACCAGGGAACAGATGATTGATACCTACCTCAACACTCTTGCTACTGTATTGGGAAGCAGCATGGAAGAAGCCAAGAAAAACATGTATGCTTTCAGCACCACCACCTACACAGGATTCCAATGCACAGTGTCCGAGGAAACATCCGAGAAATTTAAGGGATTACCCGGAGTTCTATGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTGACAAGTATATAAATGGGGAGATAATTCCATCCAAGTATCCTGTTTATGAACCGAAGAAACGAAGAGAAACAAAATATGAAAGTAGGAGATATGAAAGGAAAAGGGATGGCCCTCCTCCTGAACAACGAAGGCCAAGACCACAAGCAACTCGAACAGAATCAAATTCAGGATAAGGTAGGGCAGTGATTTTCCTAATATTATTTGCAATGCTTGCATTGGAAAATAGAATGTTTTTGTTCACTTCCCTTTGCAATGCATTAGTTTATGACTTAAGATTGTGCTTTGAACTAGAACTACTTAGGAAGATAGATGGAGGTACTCCAGGGACTTTCATATACTGTTCTTGGAATTTTGTACATGCTATGCTGTAGTTCATGTTCATTCTGGAAAGGAATCTTGTACCGTGACGTGACCTTGTAGCTCAGATATAATTGGAGAATATATATGGCTTAGAACAGTTCTTTCTTTAACTACACACATTCATCACAGAAGAATTTAGAGCAGTTGTTATCAAGCTTTTGAATAGTGAGG

Coding sequence (CDS)

ATGCTAATGGCTACCAATCTCTCCTTTTCTCCTCAATCCCTAATTCCACTTCAAAAGCCTTCGCTCTTACCGCGCGTTCAACTCCGTCACTTCCTTCAGCTCAACTCAGTGAGTCGGATTTCGACTGCTCGTCTTCATTCCAGCTCTCAATCGGGGGTTTTGGTTCGAGCCGCTTTGGATAGCGATTACTCGTCGAAGAGGAGCAGTAGCAATGAACAGAGGGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTCATGGAGTTCCCTAAAGATCCTGCTCCAACCAGGGAACAGATGATTGATACCTACCTCAACACTCTTGCTACTGTATTGGGAAGCAGCATGGAAGAAGCCAAGAAAAACATGTATGCTTTCAGCACCACCACCTACACAGGATTCCAATGCACAGTGTCCGAGGAAACATCCGAGAAATTTAAGGGATTACCCGGAGTTCTATGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTGACAAGTATATAAATGGGGAGATAATTCCATCCAAGTATCCTGTTTATGAACCGAAGAAACGAAGAGAAACAAAATATGAAAGTAGGAGATATGAAAGGAAAAGGGATGGCCCTCCTCCTGAACAACGAAGGCCAAGACCACAAGCAACTCGAACAGAATCAAATTCAGGATAA

Protein sequence

MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALDSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG

Homology

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BLAST of Clc05G16830 vs. NCBI nr
Match: XP_038900065.1 (multiple organellar RNA editing factor 9, chloroplastic [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 8.9e-119
Identity = 226/231 (97.84%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLH-SSSQSGVLVRAAL 60
           MLMATNLSFSPQSLIPLQKPSLLPRVQL HFLQLNSVSRISTARLH S S+SGVLVRAAL
Sbjct: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLGHFLQLNSVSRISTARLHESGSRSGVLVRAAL 60

Query: 61  DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSS 120
           DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG S
Sbjct: 61  DSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-S 120

Query: 121 MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 180
           MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN
Sbjct: 121 MEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 180

Query: 181 GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS 231
           GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS
Sbjct: 181 GEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS 230

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BLAST of Clc05G16830 vs. NCBI nr
Match: XP_004151975.1 (multiple organellar RNA editing factor 9, chloroplastic [Cucumis sativus] >XP_008454611.1 PREDICTED: multiple organellar RNA editing factor 9, chloroplastic [Cucumis melo] >KAA0063450.1 DAG protein [Cucumis melo var. makuwa] >KAE8650675.1 hypothetical protein Csa_010519 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMATNLSFSPQSLIPLQKPSLL RVQL HFL LNSVS+ISTARLHS SQS VLVRAALD
Sbjct: 1   MLMATNLSFSPQSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG 232
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQ TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 230

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BLAST of Clc05G16830 vs. NCBI nr
Match: XP_023521912.1 (multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.5 bits (1090), Expect = 6.0e-115
Identity = 216/230 (93.91%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMAT+LS SPQSLIPLQKPSLLPRVQ  HFLQL SVSRIS+AR+HS SQSGVLVRAALD
Sbjct: 1   MLMATSLSVSPQSLIPLQKPSLLPRVQQGHFLQLKSVSRISSARIHSGSQSGVLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSS+RSSSNE+RE IMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSERSSSNEKREEIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSY+DVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYLDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS 231
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQATRTESNS
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQATRTESNS 229

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BLAST of Clc05G16830 vs. NCBI nr
Match: XP_022139753.1 (multiple organellar RNA editing factor 9, chloroplastic [Momordica charantia] >XP_022139754.1 multiple organellar RNA editing factor 9, chloroplastic [Momordica charantia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113
Identity = 217/231 (93.94%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMATNLSFSPQSLIPLQKPSLLPR QL HFL LNSVSRIS+ARLHS+S+SG+LVRAALD
Sbjct: 1   MLMATNLSFSPQSLIPLQKPSLLPRAQLGHFLNLNSVSRISSARLHSASRSGLLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG 232
           EIIPSKYPVYEPKKRRE+KYESRRYER++DG PPEQR+PRPQATRTE NSG
Sbjct: 181 EIIPSKYPVYEPKKRRESKYESRRYERRKDG-PPEQRKPRPQATRTE-NSG 228

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BLAST of Clc05G16830 vs. NCBI nr
Match: XP_022939990.1 (multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita moschata] >KAG6607838.1 Multiple organellar RNA editing factor 9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015236.1 Multiple organellar RNA editing factor 9, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.5e-113
Identity = 213/230 (92.61%), Postives = 221/230 (96.09%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMA +LS SPQSLIPLQKPSLLPRVQ  HFLQL SVSRIS+ R+HS SQSGVLVRAALD
Sbjct: 1   MLMAISLSVSPQSLIPLQKPSLLPRVQQGHFLQLKSVSRISSVRIHSGSQSGVLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSS+RSSSNE+RE IMLPGCDYNHWLIVMEFPK+PAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSERSSSNEKREEIMLPGCDYNHWLIVMEFPKEPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSY+DVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYLDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS 231
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQATRTESNS
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQATRTESNS 229

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BLAST of Clc05G16830 vs. ExPASy Swiss-Prot
Match: Q9LPZ1 (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 6.9e-82
Identity = 162/233 (69.53%), Postives = 183/233 (78.54%), Query Frame = 0


Query: 8   SFSPQSLIPLQKPSLLPRVQLRHFLQLNSV----------SRISTARLHSSSQSGVLVRA 67
           SF+  S   L   +LLP   L  F  L+ +            ISTA   S  +  ++  A
Sbjct: 3   SFTTTSSSSLLLKTLLPVSHLNRFSTLSGIRVGDSWTPLLRNISTA--GSRRRVAIVKAA 62

Query: 68  ALDSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG 127
            +DSDYSSKRS+SNEQRETIMLPGCDYNHWLIVMEFPKDPAP+R+QMIDTYLNTLATVLG
Sbjct: 63  TVDSDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLG 122

Query: 128 SSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 187
            SMEEAKKNMYAFSTTTYTGFQCT+ EETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY
Sbjct: 123 -SMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 182

Query: 188 INGEIIPSKYPVYEPKKRRETKYESRRYERKRDG-PPPEQRRPRPQATRTESN 230
           INGEIIP  YP Y+PK+R  TKY+S+RYERKRDG PPPEQR+PR +   ++S+
Sbjct: 183 INGEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQEPAASDSS 232

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BLAST of Clc05G16830 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-79
Identity = 162/234 (69.23%), Postives = 186/234 (79.49%), Query Frame = 0


Query: 3   MAT-NLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLH---SSSQSGVLVRAA 62
           MAT NLS  P++L P  K +L P   L   L  +S+S +   R H   S S +   VRA 
Sbjct: 1   MATINLSLLPKTLTPNSK-TLAP---LLSILSTSSLSFLPCTRPHPIKSRSAAYPTVRAL 60

Query: 63  LDSDYSSKRSSSN----EQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLAT 122
            D +YSS+R+++N    E+RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLAT
Sbjct: 61  TDGEYSSRRNNNNNNSGEERETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLAT 120

Query: 123 VLGSSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGG 182
           VLG SMEEAKKNMYAFSTTTYTGFQCTV+EETSEKFKGLPGVLWVLPDSYIDVKNKDYGG
Sbjct: 121 VLG-SMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGG 180

Query: 183 DKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTES 229
           DKY+NGEIIP +YP Y+PK+ R +KY+S+ Y R+RDGPP EQRRP+ +AT   S
Sbjct: 181 DKYVNGEIIPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQRRPKQEATPESS 229

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BLAST of Clc05G16830 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 69  SSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSMEEAKKNMY 128
           S+   +ETI+L GCDY HWLIVMEF  DP PT E+MI++Y+ TL +VLG   EEAKK +Y
Sbjct: 79  SNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLTSVLGCE-EEAKKKIY 138

Query: 129 AFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYP 188
           +  T+TYTGF   +SEE S K K LPGVLWVLPDSY+DV NKDYGGD Y+ G++IP   P
Sbjct: 139 SVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIPR--P 198

Query: 189 VYEPKKRRETKYESR-RYERKRDGPPPEQRRP 220
            Y   ++R T+   R RY+R+R+    E+R P
Sbjct: 199 QYRFTEQRHTRPRPRPRYDRRRETMQVERREP 226

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BLAST of Clc05G16830 vs. ExPASy Swiss-Prot
Match: O49429 (Multiple organellar RNA editing factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF1 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 80/195 (41.03%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 8   SFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALDSDYSSKR 67
           S +P S  P    ++L R  +    +   V+  + ARL S+ Q            Y   +
Sbjct: 26  SITPASDFPSVSAAVLKRSVIG---RSTEVATRAPARLFSTRQ------------YKLYK 85

Query: 68  SSSNEQRETIMLPGCDYNHWLIVMEFPKDPAP-TREQMIDTYLNTLATVLGSSMEEAKKN 127
                  +T++  GCDYNHWLI M+F K+  P + E+M+  Y  T A  LG S+EEAK+ 
Sbjct: 86  EGDEITEDTVLFEGCDYNHWLITMDFSKEETPKSPEEMVAAYEETCAQGLGISVEEAKQR 145

Query: 128 MYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSK 187
           MYA STTTY GFQ  ++E+ SEKFK LPGV+++LPDSYID +NK+YGGDKY NG I    
Sbjct: 146 MYACSTTTYQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENGVITHRP 205

Query: 188 YPVYEPKKRRETKYE 202
            P+   + R   +++
Sbjct: 206 PPIQSGRARPRPRFD 205

[Close]

BLAST of Clc05G16830 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 61  SDYSSKRSSSN--EQRETIM---LPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATV 120
           S YS   S SN  ++  T M    PGCDY HWLIVM+ P     T++QMID Y+ TLA V
Sbjct: 56  STYSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKV 115

Query: 121 LGSSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGD 180
           +GS  EEAKK +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D +NKDYG +
Sbjct: 116 VGSE-EEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAE 175

Query: 181 KYINGEII---PSKYPVYEPKKRR---ETKYESR-RYERKRD 211
            ++NGEI+   P +    EP+ +R     +Y  R RY R+R+
Sbjct: 176 LFVNGEIVQRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRE 216

[Close]

BLAST of Clc05G16830 vs. ExPASy TrEMBL
Match: A0A5A7V8E4 (DAG protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00330 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMATNLSFSPQSLIPLQKPSLL RVQL HFL LNSVS+ISTARLHS SQS VLVRAALD
Sbjct: 1   MLMATNLSFSPQSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG 232
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQ TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 230

[Close]

BLAST of Clc05G16830 vs. ExPASy TrEMBL
Match: A0A1S3C092 (multiple organellar RNA editing factor 9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494977 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 222/231 (96.10%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMATNLSFSPQSLIPLQKPSLL RVQL HFL LNSVS+ISTARLHS SQS VLVRAALD
Sbjct: 1   MLMATNLSFSPQSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG 232
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQ TRTESNSG
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 230

[Close]

BLAST of Clc05G16830 vs. ExPASy TrEMBL
Match: A0A0A0L823 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399450 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 218/239 (91.21%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 3   MATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALDSD 62
           MATNLSFSPQSLIPLQKPSLL RVQL HFL LNSVS+ISTARLHS SQS VLVRAALDSD
Sbjct: 1   MATNLSFSPQSLIPLQKPSLLQRVQLGHFLHLNSVSQISTARLHSGSQSRVLVRAALDSD 60

Query: 63  YSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLAT-------- 122
           YSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLAT        
Sbjct: 61  YSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATFHLSSVLC 120

Query: 123 --VLGSSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDY 182
               G+SMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDY
Sbjct: 121 ENFRGNSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDY 180

Query: 183 GGDKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG 232
           GGDKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQ TRTESNSG
Sbjct: 181 GGDKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQPTRTESNSG 239

[Close]

BLAST of Clc05G16830 vs. ExPASy TrEMBL
Match: A0A6J1CDW8 (multiple organellar RNA editing factor 9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010589 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.1e-114
Identity = 217/231 (93.94%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMATNLSFSPQSLIPLQKPSLLPR QL HFL LNSVSRIS+ARLHS+S+SG+LVRAALD
Sbjct: 1   MLMATNLSFSPQSLIPLQKPSLLPRAQLGHFLNLNSVSRISSARLHSASRSGLLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG 232
           EIIPSKYPVYEPKKRRE+KYESRRYER++DG PPEQR+PRPQATRTE NSG
Sbjct: 181 EIIPSKYPVYEPKKRRESKYESRRYERRKDG-PPEQRKPRPQATRTE-NSG 228

[Close]

BLAST of Clc05G16830 vs. ExPASy TrEMBL
Match: A0A6J1FPB2 (multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445760 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113
Identity = 213/230 (92.61%), Postives = 221/230 (96.09%), Query Frame = 0


Query: 1   MLMATNLSFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALD 60
           MLMA +LS SPQSLIPLQKPSLLPRVQ  HFLQL SVSRIS+ R+HS SQSGVLVRAALD
Sbjct: 1   MLMAISLSVSPQSLIPLQKPSLLPRVQQGHFLQLKSVSRISSVRIHSGSQSGVLVRAALD 60

Query: 61  SDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSM 120
           SDYSS+RSSSNE+RE IMLPGCDYNHWLIVMEFPK+PAPTREQMIDTYLNTLATVLG SM
Sbjct: 61  SDYSSERSSSNEKREEIMLPGCDYNHWLIVMEFPKEPAPTREQMIDTYLNTLATVLG-SM 120

Query: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYING 180
           EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSY+DVKNKDYGGDKYING
Sbjct: 121 EEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYLDVKNKDYGGDKYING 180

Query: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNS 231
           EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQR+PRPQATRTESNS
Sbjct: 181 EIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRKPRPQATRTESNS 229

[Close]

BLAST of Clc05G16830 vs. TAIR 10
Match: AT1G11430.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 305.1 bits (780), Expect = 4.9e-83
Identity = 162/233 (69.53%), Postives = 183/233 (78.54%), Query Frame = 0


Query: 8   SFSPQSLIPLQKPSLLPRVQLRHFLQLNSV----------SRISTARLHSSSQSGVLVRA 67
           SF+  S   L   +LLP   L  F  L+ +            ISTA   S  +  ++  A
Sbjct: 3   SFTTTSSSSLLLKTLLPVSHLNRFSTLSGIRVGDSWTPLLRNISTA--GSRRRVAIVKAA 62

Query: 68  ALDSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLG 127
            +DSDYSSKRS+SNEQRETIMLPGCDYNHWLIVMEFPKDPAP+R+QMIDTYLNTLATVLG
Sbjct: 63  TVDSDYSSKRSNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLG 122

Query: 128 SSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 187
            SMEEAKKNMYAFSTTTYTGFQCT+ EETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY
Sbjct: 123 -SMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 182

Query: 188 INGEIIPSKYPVYEPKKRRETKYESRRYERKRDG-PPPEQRRPRPQATRTESN 230
           INGEIIP  YP Y+PK+R  TKY+S+RYERKRDG PPPEQR+PR +   ++S+
Sbjct: 183 INGEIIPCTYPTYQPKQRNNTKYQSKRYERKRDGPPPPEQRKPRQEPAASDSS 232

[Close]

BLAST of Clc05G16830 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 161.4 bits (407), Expect = 8.8e-40
Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 69  SSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSMEEAKKNMY 128
           S+   +ETI+L GCDY HWLIVMEF  DP PT E+MI++Y+ TL +VLG   EEAKK +Y
Sbjct: 79  SNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLTSVLGCE-EEAKKKIY 138

Query: 129 AFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYP 188
           +  T+TYTGF   +SEE S K K LPGVLWVLPDSY+DV NKDYGGD Y+ G++IP   P
Sbjct: 139 SVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIPR--P 198

Query: 189 VYEPKKRRETKYESR-RYERKRDGPPPEQRRP 220
            Y   ++R T+   R RY+R+R+    E+R P
Sbjct: 199 QYRFTEQRHTRPRPRPRYDRRRETMQVERREP 226

[Close]

BLAST of Clc05G16830 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 69  SSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSSMEEAKKNMY 128
           S+   +ETI+L GCDY HWLIVMEF  DP PT E+MI++Y+ TL +VLG   EEAKK +Y
Sbjct: 79  SNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINSYVKTLTSVLG-WQEEAKKKIY 138

Query: 129 AFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYP 188
           +  T+TYTGF   +SEE S K K LPGVLWVLPDSY+DV NKDYGGD Y+ G++IP   P
Sbjct: 139 SVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIPR--P 198

Query: 189 VYEPKKRRETKYESR-RYERKRDGPPPEQRRP 220
            Y   ++R T+   R RY+R+R+    E+R P
Sbjct: 199 QYRFTEQRHTRPRPRPRYDRRRETMQVERREP 226

[Close]

BLAST of Clc05G16830 vs. TAIR 10
Match: AT4G20020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast hits to 16023 proteins in 1033 species: Archae - 4; Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants - 3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33
Identity = 80/195 (41.03%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 8   SFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALDSDYSSKR 67
           S +P S  P    ++L R  +    +   V+  + ARL S+ Q            Y   +
Sbjct: 26  SITPASDFPSVSAAVLKRSVIG---RSTEVATRAPARLFSTRQ------------YKLYK 85

Query: 68  SSSNEQRETIMLPGCDYNHWLIVMEFPKDPAP-TREQMIDTYLNTLATVLGSSMEEAKKN 127
                  +T++  GCDYNHWLI M+F K+  P + E+M+  Y  T A  LG S+EEAK+ 
Sbjct: 86  EGDEITEDTVLFEGCDYNHWLITMDFSKEETPKSPEEMVAAYEETCAQGLGISVEEAKQR 145

Query: 128 MYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSK 187
           MYA STTTY GFQ  ++E+ SEKFK LPGV+++LPDSYID +NK+YGGDKY NG I    
Sbjct: 146 MYACSTTTYQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENGVITHRP 205

Query: 188 YPVYEPKKRRETKYE 202
            P+   + R   +++
Sbjct: 206 PPIQSGRARPRPRFD 205

[Close]

BLAST of Clc05G16830 vs. TAIR 10
Match: AT4G20020.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33
Identity = 80/195 (41.03%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 8   SFSPQSLIPLQKPSLLPRVQLRHFLQLNSVSRISTARLHSSSQSGVLVRAALDSDYSSKR 67
           S +P S  P    ++L R  +    +   V+  + ARL S+ Q            Y   +
Sbjct: 26  SITPASDFPSVSAAVLKRSVIG---RSTEVATRAPARLFSTRQ------------YKLYK 85

Query: 68  SSSNEQRETIMLPGCDYNHWLIVMEFPKDPAP-TREQMIDTYLNTLATVLGSSMEEAKKN 127
                  +T++  GCDYNHWLI M+F K+  P + E+M+  Y  T A  LG S+EEAK+ 
Sbjct: 86  EGDEITEDTVLFEGCDYNHWLITMDFSKEETPKSPEEMVAAYEETCAQGLGISVEEAKQR 145

Query: 128 MYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSK 187
           MYA STTTY GFQ  ++E+ SEKFK LPGV+++LPDSYID +NK+YGGDKY NG I    
Sbjct: 146 MYACSTTTYQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENGVITHRP 205

Query: 188 YPVYEPKKRRETKYE 202
            P+   + R   +++
Sbjct: 206 PPIQSGRARPRPRFD 205

The following BLAST results are available for this feature:

BLAST of Clc05G16830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900065.1	8.9e-119	97.84	multiple organellar RNA editing factor 9, chloroplastic [Benincasa hispida]	[more]
XP_004151975.1	2.2e-117	96.10	multiple organellar RNA editing factor 9, chloroplastic [Cucumis sativus] >XP_00...	[more]
XP_023521912.1	6.0e-115	93.91	multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022139753.1	1.5e-113	93.94	multiple organellar RNA editing factor 9, chloroplastic [Momordica charantia] >X...	[more]
XP_022939990.1	2.5e-113	92.61	multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita moschata...	[more]

BLAST of Clc05G16830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPZ1	6.9e-82	69.53	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q38732	1.9e-79	69.23	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]
Q84JZ6	1.2e-38	55.92	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
O49429	1.7e-32	41.03	Multiple organellar RNA editing factor 1, mitochondrial OS=Arabidopsis thaliana ...	[more]
O22793	2.3e-32	49.38	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Clc05G16830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8E4	1.1e-117	96.10	DAG protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00330 PE...	[more]
A0A1S3C092	1.1e-117	96.10	multiple organellar RNA editing factor 9, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0L823	1.4e-114	91.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399450 PE=4 SV=1	[more]
A0A6J1CDW8	7.1e-114	93.94	multiple organellar RNA editing factor 9, chloroplastic OS=Momordica charantia O...	[more]
A0A6J1FPB2	1.2e-113	92.61	multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita moscha...	[more]

BLAST of Clc05G16830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11430.1	4.9e-83	69.53	plastid developmental protein DAG, putative	[more]
AT3G06790.2	8.8e-40	55.92	plastid developmental protein DAG, putative	[more]
AT3G06790.1	1.5e-39	55.92	plastid developmental protein DAG, putative	[more]
AT4G20020.1	1.2e-33	41.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G20020.2	1.2e-33	41.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 80..167 e-value: 9.5E-7 score: 31.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..222
None	No IPR available	PANTHER	PTHR31346:SF3	MULTIPLE ORGANELLAR RNA EDITING FACTOR 9, CHLOROPLASTIC	coord: 9..230
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 9..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G16830.2	Clc05G16830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0009507	chloroplast