Clc05G06120 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTGAAGAAAATCCCAAAGGAGGTAGACAAGAAAAACGACCCCATAAATCATGGGCATTATCGTCTTTTTAGGTGCAATGAATGTGTATATAGTTCCTTCATTTTCGCCTATCCACGCGTTGTCTTGCAGCATTCGAATTTGATTGGGATTTTTATTCTGAAGCAGAAGCCGAAGGTTGCAGTTGACGATGGCTGTTCCCGACAAGGTAAGTTTCTCTTTGCTGTTCTTTACATCGCTTCTTTCCATATCTTTGATCGGCACAAATTTGTTCTGTTCTTCTCTTTTCGTTGAGAGTTTGGCTTGGCTTCATTTCCGCCCCAATCGGGGAGGGTGGGGATTTTGGGTCAATTGGCAATCGGCTTTGCATGTTTGGAATTTCTGGAAATTCTTGGATGATTTCTTCTTCAATTTTCATTTGATTTCCTTGAAAATCTTGCGTGGTTTACTCTGCTGTTAGCTCCTGAACATCAACATGATGCTGCCCTAGACTGAAACGTCTGCATGTACCTTTTTCTTGGTACTTGGAACTGATTTTGGTTTAGAGTTTTAGTTACCTTCATTTTTCTTCCTCTTTTTCCCGGGGGAAAAAGCTTAAATTCCGGTTTGGATTTGGGAATTTCAACGCCAACTTTGTCCGTTACAGAAATCCGGGCCGCTGGGTATTGGGGGTTTGTTTGGATTGATGTCTTAATTTCTGTATATTGTATAATTATCCAATATTCATGCATATTCTTCTTTATTCCAAACTTCGGCAAGTTTTAGTTATATGTATGCCTTAAGGTTCCAGTATTGATATGAGTTTTCTGTTTTGGCGGCAATGTAATATTTGGTTTTCAAGTTTGCTGTCACTATTAAATGGACATCCCAGTGTTTTAATGTTACTGATGCGCAATTGTGCTCACTTTCAAAATGAAAAATGCTATCAATTCTTTTGATGTCTTGCCTTTTGTAGTTTGTGGATATAGGTTTAGCATCATAGAGCTAGAGGAAAATATAGGCAGGGTTAAATGATATATTACTAATGCTGGTGCTGATGGAGATCATAGGTTCTTAGTTTCTCTTTTTATCTCTCTTAGGAGAAATGGTGTCTTTAGCTATGCATGCACTGGTGATGTCTCATAATTTTGTTCAGGACTACTGCTCTGCAATTTGTCCGTGTTTGTGCCCAATTTTGAGCGCTTGTTTGTTTGTTAATATCATCATCATTACAATCTCTTGAAACTTTCACTTATAGGATCCAAGAGAGGAAGTGATTCAGGCATGGTATATGGATGATAGTGATGAAGACCAGAGGCTTCCTCATCACCTTGAACCGAAGCAATATTTGTCCCTCCAACAACTTGACGGTAAGCCTTGCTGAGAAATGAGAATAGAATAGCTTACCGTTGTACAATGCTATGTGGTTTCAGATAGACTTATATTGTGTGAGTTGATAACATTATAGAACTTGGAGTTCTGAGCTGGAGACTAGATGCAGACATTTATGAAACAGATGAGGAATTGAAGAAGATACGTCGTGATCGTAATTACTCCTACATGGTTCGTCTCTTTTACTTGTGGTCACAGCCTTCTAATTTTCCTATATGGACAAGACTGTATGCTAGCGACTATTGGTTTTAAGTTGATTTTACCTGGCTCTAATTATTTTGTTTTCCTTCAGCAAGTTTGCTCTCCTCAATGGATTTCTCTCTTTGCTATTATCTTATAGTTGACCATACTGTTGTTGTCAGGACTTCTGTGAGGTCTGTCCAGAAAAGCTTCCTAACTATGAAGAGAAGATTAAAAGCTTTTATGAGGAACACCTTCACACTGATGAGGAGATCCGTTATTGTGTGGCTGGGAGTGGTAGGATTAATTATATTTCTAGACCTTGACCATCCATTGTTTGTGGCTTCTAATTTTCCTTTTCTTTAACATGGATGGATGAAGGTTATTTTGATGTTAGAGATCTGAATGACAAATGGATCCGTATTTGGGTAAAGAAGGGAGCAATGATTGTCTTGCCTGCTGGAATTTATCATCGCTTTACTCTGGATTCTGACAATTACATCAAGGTAAAGCTTATACGAGATAGAACTTGCATTTGTAGACTCTGGATTCTTAATGATGAGTGATGACAAGCTTTCTAAGTTCCAACCCCCTTCTCACCATTTATTTGCCTTCCCCACTTGTGTGTTGCTGTTTAGCAAATACCGTGTGTAGGTTCATTTTACTCCTCGTCTACTTTGCAATGCTTTCCGCTGCACAATTTTTCTCTAAAGAACAATGATGCGGCTAGCATGTGGTTTGCTCCATTCAGTTCATCATGGGTTTAGTTCATATATGTTTGGCTCTTCAACTTTTTATGTATGTAAATAACAATGGGGCGAAGATACCAATCTTCCAACTAACAAAAATCAATAATGGTTATATAAAGGCCCTCCGTGTGGTAGTAATGAAAAAGGGAGAACAATTGCAAAGCAATTTTGTTCTGGAGCACCGCGAAGTGGCATTAGATTCACTAACATCTTTTTCCATGCCTTGGAGAGGAGCAGCTTTTTATTATTATTATTTTATTTATTTATTATTATTTTTTTTTAAATCAAAATTTTGGATTAATATTGTTAATGCAGTCTTAACATTACCAATTCTATTGCTTAATGGCATCTGTATATATTATAACTGCATCAGCAAGTGGAACAATGTTTCTCATGAAAAAAAAAAAATTGTAGGCCATGCGACTCTTTGTTGGTGATCCTGTCTGGACTCCTCACAACCGTCCCAATGATCATCTTCCCGCCAGGTATTGCCATAGCTTGGTTGATGCAGTGATGAGCTTTCCCTGTTCCCCTTAGCGTAGTTGCCTAAATTATACATAGCCCTCTAAGCGTTTTTTTTTGCTGCTTTGCAGGAAGGAGTATCTCAAATGTTTTGTGGAGAAGGAAGCTGGTAATCAGGCCGTTAACGCTGCAGCTTGA ATGGTTGTGAAGAAAATCCCAAAGGAGGTAGACAAGAAAAACGACCCCATAAATCATGGGCATTATCGTCTTTTTAGAAGCCGAAGGTTGCAGTTGACGATGGCTGTTCCCGACAAGGATCCAAGAGAGGAAGTGATTCAGGCATGGTATATGGATGATAGTGATGAAGACCAGAGGCTTCCTCATCACCTTGAACCGAAGCAATATTTGTCCCTCCAACAACTTGACGAACTTGGAGTTCTGAGCTGGAGACTAGATGCAGACATTTATGAAACAGATGAGGAATTGAAGAAGATACGTCGTGATCGTAATTACTCCTACATGGACTTCTGTGAGGTCTGTCCAGAAAAGCTTCCTAACTATGAAGAGAAGATTAAAAGCTTTTATGAGGAACACCTTCACACTGATGAGGAGATCCGTTATTGTGTGGCTGGGAGTGGTTATTTTGATGTTAGAGATCTGAATGACAAATGGATCCGTATTTGGGTAAAGAAGGGAGCAATGATTGTCTTGCCTGCTGGAATTTATCATCGCTTTACTCTGGATTCTGACAATTACATCAAGGCCATGCGACTCTTTGTTGGTGATCCTGTCTGGACTCCTCACAACCGTCCCAATGATCATCTTCCCGCCAGGAAGGAGTATCTCAAATGTTTTGTGGAGAAGGAAGCTGGTAATCAGGCCGTTAACGCTGCAGCTTGA ATGGTTGTGAAGAAAATCCCAAAGGAGGTAGACAAGAAAAACGACCCCATAAATCATGGGCATTATCGTCTTTTTAGAAGCCGAAGGTTGCAGTTGACGATGGCTGTTCCCGACAAGGATCCAAGAGAGGAAGTGATTCAGGCATGGTATATGGATGATAGTGATGAAGACCAGAGGCTTCCTCATCACCTTGAACCGAAGCAATATTTGTCCCTCCAACAACTTGACGAACTTGGAGTTCTGAGCTGGAGACTAGATGCAGACATTTATGAAACAGATGAGGAATTGAAGAAGATACGTCGTGATCGTAATTACTCCTACATGGACTTCTGTGAGGTCTGTCCAGAAAAGCTTCCTAACTATGAAGAGAAGATTAAAAGCTTTTATGAGGAACACCTTCACACTGATGAGGAGATCCGTTATTGTGTGGCTGGGAGTGGTTATTTTGATGTTAGAGATCTGAATGACAAATGGATCCGTATTTGGGTAAAGAAGGGAGCAATGATTGTCTTGCCTGCTGGAATTTATCATCGCTTTACTCTGGATTCTGACAATTACATCAAGGCCATGCGACTCTTTGTTGGTGATCCTGTCTGGACTCCTCACAACCGTCCCAATGATCATCTTCCCGCCAGGAAGGAGTATCTCAAATGTTTTGTGGAGAAGGAAGCTGGTAATCAGGCCGTTAACGCTGCAGCTTGA MVVKKIPKEVDKKNDPINHGHYRLFRSRRLQLTMAVPDKDPREEVIQAWYMDDSDEDQRLPHHLEPKQYLSLQQLDELGVLSWRLDADIYETDEELKKIRRDRNYSYMDFCEVCPEKLPNYEEKIKSFYEEHLHTDEEIRYCVAGSGYFDVRDLNDKWIRIWVKKGAMIVLPAGIYHRFTLDSDNYIKAMRLFVGDPVWTPHNRPNDHLPARKEYLKCFVEKEAGNQAVNAAA Homology
BLAST of Clc05G06120 vs. NCBI nr
Match: AIS71929.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Citrullus lanatus]) HSP 1 Score: 422.2 bits (1084), Expect = 3.0e-114 Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Clc05G06120 vs. NCBI nr
Match: XP_022955419.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2-like [Cucurbita moschata]) HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113 Identity = 194/200 (97.00%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Clc05G06120 vs. NCBI nr
Match: XP_038885145.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2-like [Benincasa hispida]) HSP 1 Score: 418.7 bits (1075), Expect = 3.3e-113 Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Clc05G06120 vs. NCBI nr
Match: KAG6582329.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018738.1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 418.3 bits (1074), Expect = 4.3e-113 Identity = 193/200 (96.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Clc05G06120 vs. NCBI nr
Match: XP_023527190.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-112 Identity = 193/200 (96.50%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy Swiss-Prot
Match: F6HDT7 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g04080 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 3.8e-96 Identity = 161/195 (82.56%), Postives = 178/195 (91.28%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy Swiss-Prot
Match: Q8W108 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 OS=Arabidopsis thaliana OX=3702 GN=ARD3 PE=1 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.1e-92 Identity = 156/195 (80.00%), Postives = 175/195 (89.74%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy Swiss-Prot
Match: Q8GXE2 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=ARD2 PE=1 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 9.1e-90 Identity = 149/182 (81.87%), Postives = 167/182 (91.76%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy Swiss-Prot
Match: O48707 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=ARD1 PE=2 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.2e-86 Identity = 144/195 (73.85%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy Swiss-Prot
Match: A2XCT8 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Oryza sativa subsp. indica OX=39946 GN=ARD2 PE=2 SV=2) HSP 1 Score: 318.9 bits (816), Expect = 4.7e-86 Identity = 143/193 (74.09%), Postives = 169/193 (87.56%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy TrEMBL
Match: A0A097BTZ9 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114 Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy TrEMBL
Match: A0A6J1GW77 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111457449 PE=3 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 5.5e-114 Identity = 194/200 (97.00%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy TrEMBL
Match: A0A6J1IG69 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111473097 PE=3 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 3.0e-112 Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy TrEMBL
Match: A0A6J1CCF5 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Momordica charantia OX=3673 GN=LOC111009441 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 8.8e-112 Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of Clc05G06120 vs. ExPASy TrEMBL
Match: A0A6J1FP81 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111447258 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.0e-111 Identity = 192/200 (96.00%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of Clc05G06120 vs. TAIR 10
Match: AT4G14710.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 340.9 bits (873), Expect = 8.1e-94 Identity = 156/195 (80.00%), Postives = 175/195 (89.74%), Query Frame = 0
BLAST of Clc05G06120 vs. TAIR 10
Match: AT4G14710.2 (RmlC-like cupins superfamily protein ) HSP 1 Score: 340.9 bits (873), Expect = 8.1e-94 Identity = 156/195 (80.00%), Postives = 175/195 (89.74%), Query Frame = 0
BLAST of Clc05G06120 vs. TAIR 10
Match: AT4G14710.5 (RmlC-like cupins superfamily protein ) HSP 1 Score: 339.0 bits (868), Expect = 3.1e-93 Identity = 155/194 (79.90%), Postives = 174/194 (89.69%), Query Frame = 0
BLAST of Clc05G06120 vs. TAIR 10
Match: AT4G14710.3 (RmlC-like cupins superfamily protein ) HSP 1 Score: 336.3 bits (861), Expect = 2.0e-92 Identity = 156/196 (79.59%), Postives = 175/196 (89.29%), Query Frame = 0
BLAST of Clc05G06120 vs. TAIR 10
Match: AT4G14716.1 (acireductone dioxygenase 1 ) HSP 1 Score: 331.3 bits (848), Expect = 6.5e-91 Identity = 149/182 (81.87%), Postives = 167/182 (91.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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