Clc05G03500 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCTACTCAAATCTGCTGTTCTTCTTAAATAACTATCATATTATGCATAAGTTTTCCATGCAAAATCTGCACTCAATTTCAATGAACATCTAAACATCATTCACCTGTTTAATTAACTGCAATCAAATTATGCATTCCTTTCCTCCCCATTTTCTTGGTCGCTGTTGTGTGCCTGTCTATATGTGCTGCAAAAGACTCTACAATGTAGGTCTTTCGAAGTTTATGTTCTACTAAAGATTTTGCTCATGTATGTTGTTGTCATACATTGCTAGTGCCGTTAATAGTTCATTACATAGCTTCTGCAGTTTTGTACAAGCTAGAATAACATGGTGAGTTACTTGCAGAAAATAAAACCGAGTGCCATTTTATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAACAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGTAGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGCTAG ATGGAAAATAAAACCGAGTGCCATTTTATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAACAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGTAGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGCTAG ATGGAAAATAAAACCGAGTGCCATTTTATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATCTGGAAAGCTTAACAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGTAGGGAAAGAATACGATGGAGAAGAGAAATATAGATCTGAGCTGATTGCTATTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGCTAG MENKTECHFMDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLNSENHNLVNGIDHNLVVGKEYDGEEKYRSELIAISFLESPPEIGSVPVAELKG Homology
BLAST of Clc05G03500 vs. NCBI nr
Match: KAG6582528.1 (hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31 Identity = 80/92 (86.96%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Clc05G03500 vs. NCBI nr
Match: KAG7018913.1 (hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31 Identity = 80/92 (86.96%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Clc05G03500 vs. NCBI nr
Match: XP_022974968.1 (uncharacterized protein LOC111473815 [Cucurbita maxima]) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 75/99 (75.76%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Clc05G03500 vs. NCBI nr
Match: XP_022963288.1 (uncharacterized protein LOC111463263 [Cucurbita moschata]) HSP 1 Score: 143.7 bits (361), Expect = 9.0e-31 Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Clc05G03500 vs. NCBI nr
Match: KAA0049081.1 (hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK17482.1 hypothetical protein E5676_scaffold434G003470 [Cucumis melo var. makuwa]) HSP 1 Score: 140.6 bits (353), Expect = 7.6e-30 Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Clc05G03500 vs. ExPASy TrEMBL
Match: A0A6J1IHW2 (uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.9e-31 Identity = 75/99 (75.76%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Clc05G03500 vs. ExPASy TrEMBL
Match: A0A6J1HHB9 (uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC111463263 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.3e-31 Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Clc05G03500 vs. ExPASy TrEMBL
Match: A0A5A7U641 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003470 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30 Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0
BLAST of Clc05G03500 vs. ExPASy TrEMBL
Match: A0A0A0L967 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Clc05G03500 vs. ExPASy TrEMBL
Match: A0A7N2LFG9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.1e-13 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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