Clc05G03340 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGTCGCTTTATTCCGAGTTTCCTTTCGAACAGAAAAAGAAAATGTGAGGCAGAAGCAGAATAGTTTCTGAATTTCATCTTTTTTTCTAAATACAAAACCTCTGGAAATGATAAATTTCCGCTATCGTTGCTGCTACGGCGGACATTTCAATCCTCCTTTGCCCGTAGCGCCGATTTCAATTACAGCCGTAGGCTGCTTTGCGAGGTTTGTGATCTTCAATCACCGTCGGCGCGGTTAAGCATGGGACAAGCATTATGTACATTCGCAGGTAAATTGACCTAACTTCATTTTCTTAAACCTCAGTTCGTTTTCATTTTTCTGTTTGGATCCATCGAGAAATCGATTAACGGATCAAGCGAAATACCAAAACGGGGAGTTCGTAGTCATAGTGGAAGTCATACTAGTTTCTCCTTTAAGAAGAGATCGATCTTATTAATGAATTCGATTATCCGTATTCATTAACTTAGCTGAAGTATTAACTAAATAGCTGAATTTATTGTTTTTGTTTGCTTGGTATGCCAAATTAGCTGATTTGTGCTATCTCTGTGGATTTGGTATCGTGTCTGCTTGCAATTGCGGGTAGGGATCTCCATTTAATCCCTGGAAATCCCAAATGTGATATTTTAGCATATTTGTAAACAAATTTGGCTATGTTTAAAAACAACCTTTATGTATATATAAGTTAAAGATTATTTAAAATTTTAAATTTAAATGATATATTTGTTACTTACGAGTGCGAAATTTAACTCTTTAGTAGTAATTTAAGTTAATTAATAACTTTACTTTTTTTAAAAAAACAAAATTTACTGAAAAAAAAAAAAAAAGTGATCCCCGCGAATTCTATTTAGGAGGGAAACAACTCTTTTTGGAAATGGAGGGATGAGAAATTGATACATTTAAAATTTGAATATACTTGCAATTGCAGGCAAAGGATGGAGGGTTAAGCAATTGAGGAAGATAACAGATAGAATATTTGATCAGTTTCAAAATCAACTTCATGGTGATAAGCTGCCGGCTAAAGATCTGTACGCCGCTACGTTACTTGTATACAAGTAAGAAGCTCTATTTTTTTTTTTTTTTTTTTTTTAATTTAATTAATTAATCTATATTTTTTTTAGTACAACTTTTATAGCTCATTCAGTCTTTTATAAGATAGCCCGGTGGGAACTGAATATTAGCTTTGCTAATATTTCCATTTATTATTTCTCAATATTTCTTTCTTTTTTTTAAAAAAAAAACTAAAAACTAAAAAATAGATGTGCTTCTGGTTTCTTATTTATTGTTTTTTCTTTTTATTATTATTGAAAAAGAAATAGACAAGGGTTTGGTACCCTTTTTATTTCTTCTTATCCTAAAATTTGAAATTTTAAAAATTTAAATTATTACATAAAAATTATTTGTTTTAATTAAATATTCAGAATTTTATGTTATGTAATATTTGTGTTATACATTTATGAGTAAAAGGATAAAATGTTGCTTTTGTAAATATCATGAAAAATTTGAAAACATGAAGGAAAAAACTCGAATTTATTGTTTAACATTCCTAAGAGATTAGAAATAAGAAAGAGTTATAGTTACTAAACATTCATGTTATTCAAAAATTGAAAATAGAAAACAGGAAACGAAAAACATAAATTATTAAAGAGCTTCTAAATTTTCAGATTGGGCTTTAATTTTGATCCTTGAAGATATCTATTTAAAATCTCAAGCACTTTGTGATTTGGCATTCATGGGCTTGGTTTAATGCCGAACAAATACATGTGATACAGTGAAATTAATAAGCTGTGCCTCGGAGGGTATCATGATCCTCCCACGGAGAAACGTGTTGAAGAACGTGTCGAGAAACTCATAGAGGTACTACGAGTTTTTCATTTATTTGATAAGTTGTTGCCAGGACTGCAACATAGAAGTACTTTGTTGATACAATAATATTACAAAGGTTTAACCATGTAAGAAACAAACTGTTTTCTTTCTTTTTTTGGAAAAAAATTCACTTTCATCTATGAGATTTGAGTTTATTTGAGATTGGTGTGAAACCTTTTAAATGGTCATTAACCCCATTTAACCTATCGCTAGCATAGTAGTTAAAATGCTTTTGATATTCAGAAATTTAGAATTTAGTGAAAAAAAAAAAGTATCAATTTTATAGTATTCTCTTGTAGAATGCAAAAGAGTAATCTAAAGTTGAAACCTTTTGGCCACTAATGATGTTTAGTAAAATTGTCATATCTAATATTTTGTCGGATCAATAAATGGTCGAGTGAGCTATGTAGAATTATTTTTCAAATGTCAAAGATCGAAGTGTTACTTTTAAAACTTTAAAAGCTAAATAAACAAAATCAACCTTTAGGAAATAATTGATACTTATCATTTCTATGTTTATTGTTGGGAATTTATGCTAGATATAAATAGAAATGTAGAAAAAACAATTTGTATCTCAAACTCCCATTTTGCATGTTCGAGTTAAAAAAGGTTAACGATCATAAATCACAAATAATTAAGAGAAGGGAAAAGGAGGATGACACCGAAAAATATACTAGTTCATCTCAAACTCGAGACTATGTCCCATCTTCTTAGATTCTACTATGATGGAGATTGTAAAATGTTTCAAATTCGCATTACAAATCTCTCCCTAAATAGCCCTAACGCGAATAATTTGATTCCTATATCTTCTAATTACACATTGTATTTTCGAATAAACTCACGGCCGACGGCACGAAAAAGAGCTTTTGCGTCACTCTAAAAATTGTCGTCTGCCACTTCAATTTTGATGTCTGCACTTTCACCTTGCGGCAGCGGCACACCTTAACCCTTGATCAAAAACACATATATATGTGTATGCATAAGAAGTAAGGTTATCACCTTTCCTGTGGTGCTTCTTGTTTTGTTTTGCTATTCCTCTCTAAGAGGCATTGGTGTTTACTTTTGCTTAATCCTACTATTCCTGTTGTCATGTCTTTCAAACACTTCCAACTTAAGTTTAACAAATTGCATCTTTTTCCAGTTATATAATCTGTAAACAACTAAATGGAAAAACATGTTAAAGTCTCTGTGCTCTTGTACATACTCAACTTTGCATGTTTATGGTTCATTCGTTGTATTACAGGCCAGCGATATAAACAATGACCAATATATTGACCGTGACGAATTTGTGACATTCATACTGAGTTTCACGGCTGAGACGTTCAAATTAGTGAGACAGAGATTTTCGATCCTCACTTTGGTGGTAGCACCAATCGTCGCAGTGGTCACAAAGAAAAGGGCTGAAGGCGTTCCGGGCGTTGGAAAATTTGTGCAAAAGCTTCCTGTTTCAGCATATGCCGTTCTCGTCACCCTTGCTGCTCTCCTATTTCAAAATGCTAAGCGGCAGCTTCTTCAACGATAAGTTCTGCTTCATTTCTTCCATCTATATATTCCTTGTGTGTGTGTTTGTGAACTAATTAATACTCAAATTTGAATTTACTATTTGAAGCCTTGTTTGTATTTTGTTTATGTGGCTGTTCATCATTTTCTTTCCCTTCATGGAGGCCCCATTCAAATTTGATTGGATCATGGCTGATAAGTTTGCTTAAATTACAAGTTTAGTTCTAAATTGATGTTTCTATCTAATAGATTTATGATCTTTTAGAAATATTTATTAGATTCCTAAACTTTTGATTTTGTGTCTAATAGGTTCTTGAATTTTAAAAATGTCAAGTTAGGTTTTGAACTTTTTTTTCTTTTTCTTTTGTATGTTTAACTAGTCTATAACATGTGCGATACACTTAAAATTTATAGTTTATTTTAGTATATAGAAAGCG GAAGGTCGCTTTATTCCGAGTTTCCTTTCGAACAGAAAAAGAAAATGTGAGGCAGAAGCAGAATAGTTTCTGAATTTCATCTTTTTTTCTAAATACAAAACCTCTGGAAATGATAAATTTCCGCTATCGTTGCTGCTACGGCGGACATTTCAATCCTCCTTTGCCCGTAGCGCCGATTTCAATTACAGCCGTAGGCTGCTTTGCGAGGTTTGTGATCTTCAATCACCGTCGGCGCGGTTAAGCATGGGACAAGCATTATGTACATTCGCAGGCAAAGGATGGAGGGTTAAGCAATTGAGGAAGATAACAGATAGAATATTTGATCAGTTTCAAAATCAACTTCATGGTGATAAGCTGCCGGCTAAAGATCTGTACGCCGCTACGTTACTTGTATACAATGAAATTAATAAGCTGTGCCTCGGAGGGTATCATGATCCTCCCACGGAGAAACGTGTTGAAGAACGTGTCGAGAAACTCATAGAGGCCAGCGATATAAACAATGACCAATATATTGACCGTGACGAATTTGTGACATTCATACTGAGTTTCACGGCTGAGACGTTCAAATTAGTGAGACAGAGATTTTCGATCCTCACTTTGGTGGTAGCACCAATCGTCGCAGTGGTCACAAAGAAAAGGGCTGAAGGCGTTCCGGGCGTTGGAAAATTTGTGCAAAAGCTTCCTGTTTCAGCATATGCCGTTCTCGTCACCCTTGCTGCTCTCCTATTTCAAAATGCTAAGCGGCAGCTTCTTCAACGATAAGTTCTGCTTCATTTCTTCCATCTATATATTCCTTGTGTGTGTGTTTGTGAACTAATTAATACTCAAATTTGAATTTACTATTTGAAGCCTTGTTTGTATTTTGTTTATGTGGCTGTTCATCATTTTCTTTCCCTTCATGGAGGCCCCATTCAAATTTGATTGGATCATGGCTGATAAGTTTGCTTAAATTACAAGTTTAGTTCTAAATTGATGTTTCTATCTAATAGATTTATGATCTTTTAGAAATATTTATTAGATTCCTAAACTTTTGATTTTGTGTCTAATAGGTTCTTGAATTTTAAAAATGTCAAGTTAGGTTTTGAACTTTTTTTTCTTTTTCTTTTGTATGTTTAACTAGTCTATAACATGTGCGATACACTTAAAATTTATAGTTTATTTTAGTATATAGAAAGCG ATGGGACAAGCATTATGTACATTCGCAGGCAAAGGATGGAGGGTTAAGCAATTGAGGAAGATAACAGATAGAATATTTGATCAGTTTCAAAATCAACTTCATGGTGATAAGCTGCCGGCTAAAGATCTGTACGCCGCTACGTTACTTGTATACAATGAAATTAATAAGCTGTGCCTCGGAGGGTATCATGATCCTCCCACGGAGAAACGTGTTGAAGAACGTGTCGAGAAACTCATAGAGGCCAGCGATATAAACAATGACCAATATATTGACCGTGACGAATTTGTGACATTCATACTGAGTTTCACGGCTGAGACGTTCAAATTAGTGAGACAGAGATTTTCGATCCTCACTTTGGTGGTAGCACCAATCGTCGCAGTGGTCACAAAGAAAAGGGCTGAAGGCGTTCCGGGCGTTGGAAAATTTGTGCAAAAGCTTCCTGTTTCAGCATATGCCGTTCTCGTCACCCTTGCTGCTCTCCTATTTCAAAATGCTAAGCGGCAGCTTCTTCAACGATAA MGQALCTFAGKGWRVKQLRKITDRIFDQFQNQLHGDKLPAKDLYAATLLVYNEINKLCLGGYHDPPTEKRVEERVEKLIEASDINNDQYIDRDEFVTFILSFTAETFKLVRQRFSILTLVVAPIVAVVTKKRAEGVPGVGKFVQKLPVSAYAVLVTLAALLFQNAKRQLLQR Homology
BLAST of Clc05G03340 vs. NCBI nr
Match: XP_038892374.1 (uncharacterized protein LOC120081499 [Benincasa hispida]) HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60 Identity = 126/171 (73.68%), Postives = 143/171 (83.63%), Query Frame = 0
BLAST of Clc05G03340 vs. NCBI nr
Match: XP_038876686.1 (uncharacterized protein LOC120069050 [Benincasa hispida]) HSP 1 Score: 201.4 bits (511), Expect = 6.1e-48 Identity = 110/171 (64.33%), Postives = 136/171 (79.53%), Query Frame = 0
BLAST of Clc05G03340 vs. NCBI nr
Match: XP_008438213.1 (PREDICTED: uncharacterized protein LOC103483386 [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 9.1e-44 Identity = 100/175 (57.14%), Postives = 128/175 (73.14%), Query Frame = 0
BLAST of Clc05G03340 vs. NCBI nr
Match: KAA0049065.1 (Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK17498.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]) HSP 1 Score: 184.5 bits (467), Expect = 7.7e-43 Identity = 99/175 (56.57%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of Clc05G03340 vs. NCBI nr
Match: XP_022146952.1 (uncharacterized protein LOC111016024 [Momordica charantia]) HSP 1 Score: 174.5 bits (441), Expect = 8.0e-40 Identity = 101/167 (60.48%), Postives = 120/167 (71.86%), Query Frame = 0
BLAST of Clc05G03340 vs. ExPASy TrEMBL
Match: A0A1S3AWG2 (uncharacterized protein LOC103483386 OS=Cucumis melo OX=3656 GN=LOC103483386 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.4e-44 Identity = 100/175 (57.14%), Postives = 128/175 (73.14%), Query Frame = 0
BLAST of Clc05G03340 vs. ExPASy TrEMBL
Match: A0A5A7U613 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003630 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.7e-43 Identity = 99/175 (56.57%), Postives = 127/175 (72.57%), Query Frame = 0
BLAST of Clc05G03340 vs. ExPASy TrEMBL
Match: A0A6J1D109 (uncharacterized protein LOC111016024 OS=Momordica charantia OX=3673 GN=LOC111016024 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 3.9e-40 Identity = 101/167 (60.48%), Postives = 120/167 (71.86%), Query Frame = 0
BLAST of Clc05G03340 vs. ExPASy TrEMBL
Match: A0A5A7U485 (EF-hand domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002950 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 6.6e-40 Identity = 99/171 (57.89%), Postives = 125/171 (73.10%), Query Frame = 0
BLAST of Clc05G03340 vs. ExPASy TrEMBL
Match: A0A6J1IGT6 (uncharacterized protein LOC111472754 OS=Cucurbita maxima OX=3661 GN=LOC111472754 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 8.6e-40 Identity = 90/171 (52.63%), Postives = 124/171 (72.51%), Query Frame = 0
BLAST of Clc05G03340 vs. TAIR 10
Match: AT1G64850.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 145.2 bits (365), Expect = 4.8e-35 Identity = 82/160 (51.25%), Postives = 103/160 (64.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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