Clc05G02920 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G02920
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box domain-containing protein
Location	ClcChr05: 2000288 .. 2002799 (+)
RNA-Seq Expression	Clc05G02920
Synteny	Clc05G02920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAACTACCGGTGGAGTGCATCTGTTGCATTTTGGCCTTCACGTCGCCGAAAGATGTTTGCAAACTCGCCGGAGTCTCGACGGCGTTCAGATCCGCCGCCGCTTCTGACCTTCTCTGGAGGACTTTTTTGCCGCCGGATTACCCGCAGATTATTGCTCAGTCGCCGTCCTTGTCTTTGTTTTGGTTTCTAAATTCCTTGCCGGAGAAGGCTCTCTATTTACATCTTTCCGATCATCCACTTCTTATAGGCACTGGAAATTCGGTAATTCCACATTTATTTATTTTTATTATTATTAGTTTTAATCTCTGACATCGATGATAATAGTTGGTTTGGGTATCTTAGTTCTTAAACTACGGTGCATAAAAAAGAAAGTCATCAGAGTTGTGGTCGATTTCAAAAGGTTAGGATTTTGAGTTTAATTTCAATTTAGTCGTTAAGTTAACATTTTTTGGTCTTTTAATTGTGAGTTTGGATCTTTCTAGTTCTAAAGTGTCATGATAGGGTTTGTGGTCAGATTTCATAAAAGGTTAGAGTTTTGGGTTTAATTAATTTAAGGTAATTATGACATGTAAAAAAGTTGAACTCAAAACTTGAGTGTTAGAATTAAGGTTTAAAATGTAACAAGAATGCTGATGTTTAATGTTATGTAATTGTCAAATATCTATAAAATGTACCAAAAAAAAAAAAAGAGTTAAATATAAACATTTTACACCTTTTAAAAGTCTTCATGTTAATATAATGGTTAAATTTAGGGTTAGATTTGAGTTTTCTCGAGTGAAGTTTTAATAAAAAGTACGAGTGTTTAATTGAAAGGATGTCAAACAATCAAAATCCACTATATAAACCTCTAGCTTTTTAGACAAAAATTAGTTTGAAATTTTATTCTACTAATTTGAATAGAGATATTTTTAAAAATAGAAAAATAGTTCAAATATAACAAAATTTTGTTGTGATAGACTGTGATGCGATAGATGTTGACCTATATATATATATACATTTTTAAATACTTTTCTATTTATAATAATTTTTCATTTGAATATGAACAGACTATTGCATTGGAAAAAAAAAGTGGGAAAAAGTGTTATATGATTGGCTCAAGGGACATCTGCTCTAGGACGATGAGACATTGGACCAGGAAATATGTCCCTCAATCAAGGTGCCCCGTCAACTTTTACCTTTTTATCATTCATTTTTCACTTTTATACACCTTCTTATCAAGTAAATGGATTATTATGGGCTTAAATAAGTCCTAGGTGAAATCAATTTTTTCTTTAAATAGAAAAGATCTTGTGATAAAGAATGTGGAAGAGAGTTGTGAAAGGGACTTGTTTAATTGTAATACTAATCTTCATTCTAACACCTTACCAATAAGATTGAACTATGCAGTGTGTGAGGATCCACCTTGAAAAAATTAAGGGACTTCACACTCTTATAGATGACAATTAGTTTTAAGATGAAACCTCATACTATTTGAGTTAGTGTATGTAGGCCCTCATATTGGCCCAACCACCCTACATCTTTATGTTCATCTTCTACTTCTCCTTCTTAATTTGAGTTTTTACTCTTCATCCACAAAACTGCTCTTTTCTTTGCTTTGTGTTAATTACTTTTACTCCCAACCTTTGCTTTTGCATGCTGTGAGTGTTCCCATTTTTACTGTCTTCTCTTCCTGTCAAACTTTGTGAGTTGCACTTATTGAAAGCACAACAACCAATGTAGTCCTAATCTATTTAATAGCTTTTAACATATGTGTCCACGTATGTCTTTAAACTTTCAATGTTATGTGTGCAATACATGTTTGAGAGTCTATAATTTTTTAATTTTATCTATACTCTTTTTGGTAATCATTTGATTTTTCTTATTTTTTAAAATTAAACTTATAAACACTACTACTTCCGTCGAATTTCTTTATTATTCACTTTCTACAAATATTTTAAAAACCAAGTCAAGAAATATGAAACCCATGAAAATGTTTATTATTTATGTTATATCCAAGTGAAATTTGATTTTTTTTTTCATATTTTTTAAAATAAGATGTGAATTTCACTCCTCACATTGATATCAAATCCATGAAAGCGTGAAAATATTGATAGAAATTTAATATTATGATTATAAATATAGGTTTTCTTACGCCGCTGATGTGGAGTTCGGAATTCAAATTTGTATAAAAGGGAAGATAGAAGCCAAAAACTTGAGTCCAAAAACCTACTATGCAGCTTATTTTGTGTTGAAGTTTGAGCAGGAAGAACACTTGGAAACTTTTCGTCCCTTCAAACCAATTCTACCATTCCTTTATCTTGAAGGAGAGGAGGAGAAGAGAAAGTTGAACGCTTTTGAAGGCTTTCCAATGGAAAGAGAAGATGGATGGATGGAGATTGAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATGTTTATCCCACTTGTTTAACATGTAGGTTCATTTTTGAAGGTATTGAGTTTAGGCCAATCTCTAAAGGTATTCAATAA

mRNA sequence

ATGAATAAACTACCGGTGGAGTGCATCTGTTGCATTTTGGCCTTCACGTCGCCGAAAGATGTTTGCAAACTCGCCGGAGTCTCGACGGCGTTCAGATCCGCCGCCGCTTCTGACCTTCTCTGGAGGACTTTTTTGCCGCCGGATTACCCGCAGATTATTGCTCAGTCGCCGTCCTTGTCTTTGTTTTGGTTTCTAAATTCCTTGCCGGAGAAGGCTCTCTATTTACATCTTTCCGATCATCCACTTCTTATAGGCACTGGAAATTCGACTATTGCATTGGAAAAAAAAAGTGGGAAAAAGTGTTATATGATTGGCTCAAGGGACATCTGCTCTAGGACGATGAGACATTGGACCAGGAAATATGTCCCTCAATCAAGGTTTTCTTACGCCGCTGATGTGGAGTTCGGAATTCAAATTTGTATAAAAGGGAAGATAGAAGCCAAAAACTTGAGTCCAAAAACCTACTATGCAGCTTATTTTGTGTTGAAGTTTGAGCAGGAAGAACACTTGGAAACTTTTCGTCCCTTCAAACCAATTCTACCATTCCTTTATCTTGAAGGAGAGGAGGAGAAGAGAAAGTTGAACGCTTTTGAAGGCTTTCCAATGGAAAGAGAAGATGGATGGATGGAGATTGAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATGTTTATCCCACTTGTTTAACATGTAGGTTCATTTTTGAAGGTATTGAGTTTAGGCCAATCTCTAAAGGTATTCAATAA

Coding sequence (CDS)

ATGAATAAACTACCGGTGGAGTGCATCTGTTGCATTTTGGCCTTCACGTCGCCGAAAGATGTTTGCAAACTCGCCGGAGTCTCGACGGCGTTCAGATCCGCCGCCGCTTCTGACCTTCTCTGGAGGACTTTTTTGCCGCCGGATTACCCGCAGATTATTGCTCAGTCGCCGTCCTTGTCTTTGTTTTGGTTTCTAAATTCCTTGCCGGAGAAGGCTCTCTATTTACATCTTTCCGATCATCCACTTCTTATAGGCACTGGAAATTCGACTATTGCATTGGAAAAAAAAAGTGGGAAAAAGTGTTATATGATTGGCTCAAGGGACATCTGCTCTAGGACGATGAGACATTGGACCAGGAAATATGTCCCTCAATCAAGGTTTTCTTACGCCGCTGATGTGGAGTTCGGAATTCAAATTTGTATAAAAGGGAAGATAGAAGCCAAAAACTTGAGTCCAAAAACCTACTATGCAGCTTATTTTGTGTTGAAGTTTGAGCAGGAAGAACACTTGGAAACTTTTCGTCCCTTCAAACCAATTCTACCATTCCTTTATCTTGAAGGAGAGGAGGAGAAGAGAAAGTTGAACGCTTTTGAAGGCTTTCCAATGGAAAGAGAAGATGGATGGATGGAGATTGAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATGTTTATCCCACTTGTTTAACATGTAGGTTCATTTTTGAAGGTATTGAGTTTAGGCCAATCTCTAAAGGTATTCAATAA

Protein sequence

MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSLFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRDICSRTMRHWTRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFKPILPFLYLEGEEEKRKLNAFEGFPMEREDGWMEIEMGQFFTQGDDLSIIFNVYPTCLTCRFIFEGIEFRPISKGIQ

Homology

[Close]

BLAST of Clc05G02920 vs. NCBI nr
Match: XP_011650883.2 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650311.1 hypothetical protein Csa_009925 [Cucumis sativus])

HSP 1 Score: 241.5 bits (615), Expect = 7.8e-60
Identity = 137/262 (52.29%), Postives = 173/262 (66.03%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LP EC+ CILAFTSPKD C+ A VS AFRSAA SD LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPAECLSCILAFTSPKDACRSAVVSPAFRSAADSDALWTTFLPSDYRQIISQASSSS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALYL LSDH L IG+GNS   LEK SGKKCYMIG+RD   +   +  +W
Sbjct: 63  TSSFLNSLSKKALYLRLSDHLLFIGSGNSGFVLEKGSGKKCYMIGARDLEIVWGSSPEYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T + +P SRFS  A++++   + IKGKIE +NLSPKT YAAYFV K  ++          
Sbjct: 123 TWQSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETT 182

Query: 181 PILPFLYLEG---EEEKRK---LNAFEGFP---MEREDGWMEIEMGQFFTQ-GDDLSIIF 240
           P+   ++ EG   EE++RK   L+  EG     +ER DGWME+EMG+FF + GDD SIIF
Sbjct: 183 PVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIF 242

Query: 241 NVYPTCLTCR--FIFEGIEFRP 248
           ++       +   I EG+E RP
Sbjct: 243 HLMQIDRLRKGGLIVEGVEIRP 264

[Close]

BLAST of Clc05G02920 vs. NCBI nr
Match: XP_004134378.3 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650310.1 hypothetical protein Csa_010742 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 7.3e-58
Identity = 134/262 (51.15%), Postives = 169/262 (64.50%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LP ECI  ILAFTSPKD C+ A  S AFRSAA SD +W TFLP DY QII+Q+ S S
Sbjct: 3   INQLPAECISSILAFTSPKDACRSAVASPAFRSAADSDAIWTTFLPSDYRQIISQASSSS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALY  LSDH L IG+GNS+  LEK+SGKKCYMIG+RD   +   +  +W
Sbjct: 63  TSSFLNSLSKKALYFRLSDHLLFIGSGNSSFVLEKESGKKCYMIGARDLEIVWGSSPAYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T + +P SRF   A++     + IKGKIE +NLSPKT YAAYFV KF++ +        K
Sbjct: 123 TWQSIPTSRFPEVAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGTK 182

Query: 181 PILPFLYLEGEE------EKRKLNAFEGFPM---EREDGWMEIEMGQFFTQ-GDDLSIIF 240
           P+   +Y EGEE      +   L+  EG P+   ER DGWME+EMG+FF + GDD  +IF
Sbjct: 183 PVSLEVYFEGEEVGEDGTKMVLLDPPEGSPVVCKERSDGWMEVEMGEFFNELGDDGMVIF 242

Query: 241 NV--YPTCLTCRFIFEGIEFRP 248
           ++      +    I EGIE RP
Sbjct: 243 HLKQIDGIIKGGLIVEGIEIRP 264

[Close]

BLAST of Clc05G02920 vs. NCBI nr
Match: KAG6582459.1 (putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.6 bits (597), Expect = 9.6e-58
Identity = 137/265 (51.70%), Postives = 170/265 (64.15%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LPVECI  ILAFTSPKD C+ A VS AFRSAA S+ LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPVECIATILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALY HL DH LLIG+GNS+  LEK+SGKKCYMIG+RD   I   + ++W
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFVLEKESGKKCYMIGARDLEIIWGNSTQYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T    P SRFS  A+++    + IKG+IEA+NLSP+T YAAY V K  ++ +       +
Sbjct: 123 TWNPNPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRER 182

Query: 181 PILPFLYLEGEE-----------EKRKLNAFEGFPMEREDGWMEIEMGQFFTQ-GDDLSI 240
           P+L  +Y EG E            +  L AFE    ER DGWMEIEMG+ F + GDD SI
Sbjct: 183 PVLLRVYFEGAEVEEGKTAILDPREGSLVAFE----ERADGWMEIEMGEIFNELGDDGSI 242

Query: 241 IFNV---YPTCLTCRFIFEGIEFRP 248
           IF++   +        I EGIE RP
Sbjct: 243 IFHLKEFHDFITKSGLIVEGIEIRP 263

[Close]

BLAST of Clc05G02920 vs. NCBI nr
Match: XP_022924695.1 (putative F-box protein PP2-B12 [Cucurbita moschata])

HSP 1 Score: 234.6 bits (597), Expect = 9.6e-58
Identity = 137/265 (51.70%), Postives = 170/265 (64.15%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LPVECI  ILAFTSPKD C+ A VS AFRSAA S+ LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPVECIAAILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALY HL DH LLIG+GNS+  LEK+SGKKCYMIG+RD   I   + ++W
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFVLEKESGKKCYMIGARDLEIIWGNSTQYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T    P SRFS  A+++    + IKG+IEA+NLSP+T YAAY V K  ++ +       +
Sbjct: 123 TWNPNPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRER 182

Query: 181 PILPFLYLEGEE-----------EKRKLNAFEGFPMEREDGWMEIEMGQFFTQ-GDDLSI 240
           P+L  +Y EG E            +  L AFE    ER DGWMEIEMG+ F + GDD SI
Sbjct: 183 PVLLRVYFEGAEVEEGKTAILDPREGSLVAFE----ERADGWMEIEMGEIFNELGDDGSI 242

Query: 241 IFNV---YPTCLTCRFIFEGIEFRP 248
           IF++   +        I EGIE RP
Sbjct: 243 IFHLKEFHNFITKSGLIVEGIEIRP 263

[Close]

BLAST of Clc05G02920 vs. NCBI nr
Match: XP_038905036.1 (LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida])

HSP 1 Score: 232.3 bits (591), Expect = 4.8e-57
Identity = 136/263 (51.71%), Postives = 168/263 (63.88%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LPVECI  ILAFTSPKD C+ A VS AFRSA  SD LW  FLP DY QII+Q+ S S
Sbjct: 3   INQLPVECISSILAFTSPKDACRSAAVSPAFRSAVDSDALWTNFLPSDYQQIISQASSSS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALY HL DH L IG+GNS+ ALEK+SGKKCYMIG+RD   I   +  +W
Sbjct: 63  SSLFLNSLSKKALYFHLCDHLLFIGSGNSSFALEKESGKKCYMIGARDLDIIWGNSPEYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T K +P SRF   A++E    + IKGKIEA+NLS KT YAAYFV    +  +       +
Sbjct: 123 TWKSIPSSRFPQVAELEIVWWLEIKGKIEARNLSSKTKYAAYFVFNLVENPYXRHGFQIR 182

Query: 181 PILPFLYLEG---EEEKRK---LNAFEGFPM---EREDGWMEIEMGQFFTQ-GDDLSIIF 240
           P+   ++ EG   EEE +K   L+  +G  +   ER DGWMEIEMG+ F + GDD SI+F
Sbjct: 183 PVSLEVHFEGAEVEEEGKKRVILDPPQGSLLVYEERSDGWMEIEMGEIFNELGDDGSIVF 242

Query: 241 NVYPT---CLTCRFIFEGIEFRP 248
           ++            I EGIE RP
Sbjct: 243 HLKEIDNFISKGGLIVEGIEIRP 265

[Close]

BLAST of Clc05G02920 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 92/271 (33.95%), Postives = 139/271 (51.29%), Query Frame = 0


Query: 4   LPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSLFW 63
           LP +CI  I++FTSP+D C  A VS  F SA +SD +W  FLPP+Y  ++++S   +   
Sbjct: 64  LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFA--- 123

Query: 64  FLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRDI---CSRTMRHWTRK 123
                 +K LY  L  +P+LI  G  +  LEK SGK+C M+ S+++      +  +W   
Sbjct: 124 -----SKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWI 183

Query: 124 YVPQSRFSYAADVEFGIQIC---IKGKIEAKNLSPKTYYAAYFVLKFEQE----EHLETF 183
            +P+SRF+  A++   + +C   I+GK  A+ LSP T Y+AY V K +       HL   
Sbjct: 184 SIPESRFNKIAEL---LDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHL--- 243

Query: 184 RPFKPILPFLYLEGEEEKRKLNAFEG--------------FPMEREDGWMEIEMGQFFTQ 243
               P+   L L G+E  ++   F G               P +REDGWME E+G+FF +
Sbjct: 244 ----PVEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNE 303

Query: 244 G--DDLSI-IFNVYPTCLTCRFIFEGIEFRP 248
              D++   +  +         I +GIEFRP
Sbjct: 304 ERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of Clc05G02920 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-30
Identity = 91/242 (37.60%), Postives = 122/242 (50.41%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           MN LP +CI  IL+ T+P DVC+L+ VS+ FRSAA SD +W  FLP D+P   A    L 
Sbjct: 1   MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLP 60

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
                     K L+  L D+PLLI     + +LE+KSG KCYM+ +R    +     R+W
Sbjct: 61  --------TRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYW 120

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
               +P +RF   A++     + I GKI    LS  T YAAYFV K+    +   FR  +
Sbjct: 121 HWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPY--GFR--Q 180

Query: 181 PILPFLYLEGEEEKRKL------------NAFEG-FPMEREDGWMEIEMGQFFTQGDDLS 227
           P+   L L   E    +               EG  P+ R DGW E+E+GQFF +  DL 
Sbjct: 181 PVETSLVLADTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLG 230

[Close]

BLAST of Clc05G02920 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-30
Identity = 90/251 (35.86%), Postives = 123/251 (49.00%), Query Frame = 0


Query: 4   LPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSLFW 63
           LP ECI  +++FTSP D C+++ VS   RSAA S+  W  FLP DY   I  S       
Sbjct: 6   LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNS------- 65

Query: 64  FLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHWTRK 123
            L+    K L+L   + PLLI  G ++  +EK+SGKKC+M+ +R    +   +   W   
Sbjct: 66  -LSRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWV 125

Query: 124 YVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFKPIL 183
            +P SRF   A +       I+GKI    LS  T Y+AY V K EQE     F      +
Sbjct: 126 SIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK-EQEMGSFGFESLPLEV 185

Query: 184 PFLYLEGE-EEKRKLNAFEGFPMEREDGWMEIEMGQFFTQGDDLSIIFNVYPT---CLTC 243
            F     E    R++    G    REDGW+EIE+G+++   DD  I  +V  T       
Sbjct: 186 SFRSTRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKG 245

Query: 244 RFIFEGIEFRP 248
             I +GIE RP
Sbjct: 246 GIIVQGIEIRP 247

[Close]

BLAST of Clc05G02920 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.7e-30
Identity = 87/280 (31.07%), Postives = 139/280 (49.64%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           ++ LP EC+  I++FTSP+D C LA VS  F SA  SD++W  F+PP+Y  +I+QS +  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFK 95

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRDIC---SRTMRHW 120
                  L +K LY  L D  +LI  G  ++ +EK + K+C MI + ++      + + W
Sbjct: 96  F------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSW 155

Query: 121 TRKYVPQSRFSYAADVEFGIQIC---IKGKIEAKNLSPKTYYAAYFVLK-------FEQ- 180
                PQ+RF   A++   +++C   I+G+I ++ +SPKT Y+AY V K       FE  
Sbjct: 156 RWIPDPQARFETVAEL---LEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENV 215

Query: 181 -------------EEHLETFRPFKPILPFLYLEGEEEKRKLNAFEGFPMEREDGWMEIEM 240
                        EE    +  F   +   +   +  K  +      P  R+DGWMEI++
Sbjct: 216 AVEVVVGVVGQDLEESCRRYICFDETMDEQFRRRDRGKNLVK-----PERRKDGWMEIKI 275

Query: 241 GQFFTQG-----DDLSII-FNVYPTCLTCRFIFEGIEFRP 248
           G+FF +G     D++ ++             I +GIE RP
Sbjct: 276 GEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of Clc05G02920 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 88/265 (33.21%), Postives = 129/265 (48.68%), Query Frame = 0


Query: 2   NKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSL 61
           +  P +CI  I++FT+P+D C  A VS  F S   SD++W  FLP DY  +I  S   S 
Sbjct: 15  DSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFS- 74

Query: 62  FWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHWT 121
                   +K LY  L + P+L      ++ LEK SGK+C M+ + +   I     ++W 
Sbjct: 75  -------SKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQ 134

Query: 122 RKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFKP 181
              +P+SRF   A +       I+G+   + LSP+T Y+AY V  F+  +    F+    
Sbjct: 135 WIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIV--FKGVDKCYGFQNV-A 194

Query: 182 ILPFLYLEGEEEKRKLNAFEGF----------PMEREDGWMEIEMGQFFTQG---DDLSI 241
           I   + + G+E  R+L  F             P +REDGWMEIE+G+FF  G   D+  I
Sbjct: 195 IEAAVGVVGQEPSRRLICFSEAIRRGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEI 254

Query: 242 IFNVYPT---CLTCRFIFEGIEFRP 248
             +   T      C  I +GIE RP
Sbjct: 255 EMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of Clc05G02920 vs. ExPASy TrEMBL
Match: A0A0A0L9G5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 5.0e-60
Identity = 137/262 (52.29%), Postives = 173/262 (66.03%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LP EC+ CILAFTSPKD C+ A VS AFRSAA SD LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPAECLSCILAFTSPKDACRSAVVSPAFRSAADSDALWTTFLPSDYRQIISQASSSS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALYL LSDH L IG+GNS   LEK SGKKCYMIG+RD   +   +  +W
Sbjct: 63  TSSFLNSLSKKALYLRLSDHLLFIGSGNSGFVLEKGSGKKCYMIGARDLEIVWGSSPAYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T + +P SRFS  A++++   + IKGKIE +NLSPKT YAAYFV K  ++          
Sbjct: 123 TWQSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKLVEDNFCRHVFETT 182

Query: 181 PILPFLYLEG---EEEKRK---LNAFEGFP---MEREDGWMEIEMGQFFTQ-GDDLSIIF 240
           P+   ++ EG   EE++RK   L+  EG     +ER DGWME+EMG+FF + GDD SIIF
Sbjct: 183 PVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSIIF 242

Query: 241 NVYPTCLTCR--FIFEGIEFRP 248
           ++       +   I EG+E RP
Sbjct: 243 HLMQIDRLRKGGLIVEGVEIRP 264

[Close]

BLAST of Clc05G02920 vs. ExPASy TrEMBL
Match: A0A6J1EFS1 (putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 4.6e-58
Identity = 137/265 (51.70%), Postives = 170/265 (64.15%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LPVECI  ILAFTSPKD C+ A VS AFRSAA S+ LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPVECIAAILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALY HL DH LLIG+GNS+  LEK+SGKKCYMIG+RD   I   + ++W
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFVLEKESGKKCYMIGARDLEIIWGNSTQYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T    P SRFS  A+++    + IKG+IEA+NLSP+T YAAY V K  ++ +       +
Sbjct: 123 TWNPNPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRER 182

Query: 181 PILPFLYLEGEE-----------EKRKLNAFEGFPMEREDGWMEIEMGQFFTQ-GDDLSI 240
           P+L  +Y EG E            +  L AFE    ER DGWMEIEMG+ F + GDD SI
Sbjct: 183 PVLLRVYFEGAEVEEGKTAILDPREGSLVAFE----ERADGWMEIEMGEIFNELGDDGSI 242

Query: 241 IFNV---YPTCLTCRFIFEGIEFRP 248
           IF++   +        I EGIE RP
Sbjct: 243 IFHLKEFHNFITKSGLIVEGIEIRP 263

[Close]

BLAST of Clc05G02920 vs. ExPASy TrEMBL
Match: A0A0A0L445 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 132/262 (50.38%), Postives = 167/262 (63.74%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LP ECI  ILAFTSPKD C+ A  S AFRSAA SD +W TFLP DY QII+Q+ S S
Sbjct: 3   INQLPAECISSILAFTSPKDACRSAVASPAFRSAADSDAIWTTFLPSDYRQIISQASSSS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
               LNSL +KALY  LSDH L IG+GNS+  LEK+SGKKCYMIG+RD   +   +  +W
Sbjct: 63  TSSVLNSLSKKALYFRLSDHLLFIGSGNSSFVLEKESGKKCYMIGARDLEIVWGSSPAYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T + +P SRF   A++     + IKGKIE +NLSPKT YAAYFV KF++ +        K
Sbjct: 123 TWQSIPTSRFPEVAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGTK 182

Query: 181 PILPFLYLEGEE------EKRKLNAFEGFPM---EREDGWMEIEMGQFFTQ-GDDLSIIF 240
           P+   +Y EGEE      +   L+  EG P+   ER DGWME+EMG+FF + GDD  +IF
Sbjct: 183 PVSLEVYFEGEEVGEDGTKMVLLDPPEGSPVVCKERSDGWMEVEMGEFFNELGDDGMVIF 242

Query: 241 NV--YPTCLTCRFIFEGIEFRP 248
           ++      +    I EGIE  P
Sbjct: 243 HLKQIDGIIKGGLIVEGIEISP 264

[Close]

BLAST of Clc05G02920 vs. ExPASy TrEMBL
Match: A0A6J1IZ41 (putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-56
Identity = 134/261 (51.34%), Postives = 168/261 (64.37%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LPVECI  ILAFTSPKD C+ A VS AFRSAA S+ LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPVECISSILAFTSPKDACRSAAVSLAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
              FLNSL +KALY HL D PLLIG+GNS+ ALEK SGKKCY+IG+RD   I   + ++W
Sbjct: 63  TTSFLNSLSKKALYFHLCDRPLLIGSGNSSFALEKDSGKKCYLIGARDLGIIWGNSSQYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T    P SRF   A+++    + IKG IEA+NLSP+T YAAY V K  ++ +       +
Sbjct: 123 TWNSNPISRFCEVAELQRVWWLEIKGSIEARNLSPQTNYAAYLVFKLVEDRYQRRGFRER 182

Query: 181 PILPFLYLEGEEEKRKLNAF----EGFPM---EREDGWMEIEMGQFFTQ-GDDLSIIFNV 240
           P+L  +YLEG E +    A     EG  +   ER DGWMEIEMG+ F + GDD SI+ ++
Sbjct: 183 PVLLRVYLEGAEVEEGKTAILEPREGSHVAFEERADGWMEIEMGEIFNELGDDGSIVCHL 242

Query: 241 ---YPTCLTCRFIFEGIEFRP 248
              +        I EGIE RP
Sbjct: 243 KEFHDFITKSGLIVEGIEIRP 263

[Close]

BLAST of Clc05G02920 vs. ExPASy TrEMBL
Match: A0A0A0L6T0 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-55
Identity = 133/263 (50.57%), Postives = 170/263 (64.64%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           +N+LP EC+  ILAFTSPKD C+ A  S AFRSAA SD LW TFLP DY QII+Q+ S S
Sbjct: 3   INQLPAECLSSILAFTSPKDACRSAVASPAFRSAADSDALWITFLPSDYRQIISQASSSS 62

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
               LNSL +KALY  LSDH L IG+GNS+  LEK+SGKKCYMIG+RD   I   + ++W
Sbjct: 63  TSSCLNSLSKKALYFRLSDHLLFIGSGNSSFVLEKESGKKCYMIGARDLDIIWGNSPQYW 122

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
           T K +P SRF   A+++    + IKGKIEA++LSPKT YAAYFV K  ++ +       +
Sbjct: 123 TWKSIPTSRFREVAELQVVWWLEIKGKIEARSLSPKTKYAAYFVFKLVEDRYSRRGFQIR 182

Query: 181 PILPFLYLEG---EEEKRK---LNAFEGFPM---EREDGWMEIEMGQFFTQ-GDDLSIIF 240
           P+   ++ EG   EE+ RK   L+  EG  +   ER DGWME+EMG+ F + GDD +IIF
Sbjct: 183 PVSLEVHFEGAEVEEDGRKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGDDGTIIF 242

Query: 241 NVYPT---CLTCRFIFEGIEFRP 248
           ++            I EGIE RP
Sbjct: 243 HLKQIDNFISKGGLIVEGIEIRP 265

[Close]

BLAST of Clc05G02920 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-33
Identity = 92/271 (33.95%), Postives = 139/271 (51.29%), Query Frame = 0


Query: 4   LPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSLFW 63
           LP +CI  I++FTSP+D C  A VS  F SA +SD +W  FLPP+Y  ++++S   +   
Sbjct: 64  LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFA--- 123

Query: 64  FLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRDI---CSRTMRHWTRK 123
                 +K LY  L  +P+LI  G  +  LEK SGK+C M+ S+++      +  +W   
Sbjct: 124 -----SKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWI 183

Query: 124 YVPQSRFSYAADVEFGIQIC---IKGKIEAKNLSPKTYYAAYFVLKFEQE----EHLETF 183
            +P+SRF+  A++   + +C   I+GK  A+ LSP T Y+AY V K +       HL   
Sbjct: 184 SIPESRFNKIAEL---LDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHL--- 243

Query: 184 RPFKPILPFLYLEGEEEKRKLNAFEG--------------FPMEREDGWMEIEMGQFFTQ 243
               P+   L L G+E  ++   F G               P +REDGWME E+G+FF +
Sbjct: 244 ----PVEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNE 303

Query: 244 G--DDLSI-IFNVYPTCLTCRFIFEGIEFRP 248
              D++   +  +         I +GIEFRP
Sbjct: 304 ERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of Clc05G02920 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 135.2 bits (339), Expect = 7.4e-32
Identity = 91/242 (37.60%), Postives = 122/242 (50.41%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           MN LP +CI  IL+ T+P DVC+L+ VS+ FRSAA SD +W  FLP D+P   A    L 
Sbjct: 1   MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGLP 60

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHW 120
                     K L+  L D+PLLI     + +LE+KSG KCYM+ +R    +     R+W
Sbjct: 61  --------TRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYW 120

Query: 121 TRKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFK 180
               +P +RF   A++     + I GKI    LS  T YAAYFV K+    +   FR  +
Sbjct: 121 HWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPY--GFR--Q 180

Query: 181 PILPFLYLEGEEEKRKL------------NAFEG-FPMEREDGWMEIEMGQFFTQGDDLS 227
           P+   L L   E    +               EG  P+ R DGW E+E+GQFF +  DL 
Sbjct: 181 PVETSLVLADTESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLG 230

[Close]

BLAST of Clc05G02920 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 90/251 (35.86%), Postives = 123/251 (49.00%), Query Frame = 0


Query: 4   LPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSLFW 63
           LP ECI  +++FTSP D C+++ VS   RSAA S+  W  FLP DY   I  S       
Sbjct: 6   LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNS------- 65

Query: 64  FLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHWTRK 123
            L+    K L+L   + PLLI  G ++  +EK+SGKKC+M+ +R    +   +   W   
Sbjct: 66  -LSRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWV 125

Query: 124 YVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFKPIL 183
            +P SRF   A +       I+GKI    LS  T Y+AY V K EQE     F      +
Sbjct: 126 SIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFK-EQEMGSFGFESLPLEV 185

Query: 184 PFLYLEGE-EEKRKLNAFEGFPMEREDGWMEIEMGQFFTQGDDLSIIFNVYPT---CLTC 243
            F     E    R++    G    REDGW+EIE+G+++   DD  I  +V  T       
Sbjct: 186 SFRSTRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKG 245

Query: 244 RFIFEGIEFRP 248
             I +GIE RP
Sbjct: 246 GIIVQGIEIRP 247

[Close]

BLAST of Clc05G02920 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 132.5 bits (332), Expect = 4.8e-31
Identity = 87/280 (31.07%), Postives = 139/280 (49.64%), Query Frame = 0


Query: 1   MNKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLS 60
           ++ LP EC+  I++FTSP+D C LA VS  F SA  SD++W  F+PP+Y  +I+QS +  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFK 95

Query: 61  LFWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRDIC---SRTMRHW 120
                  L +K LY  L D  +LI  G  ++ +EK + K+C MI + ++      + + W
Sbjct: 96  F------LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSW 155

Query: 121 TRKYVPQSRFSYAADVEFGIQIC---IKGKIEAKNLSPKTYYAAYFVLK-------FEQ- 180
                PQ+RF   A++   +++C   I+G+I ++ +SPKT Y+AY V K       FE  
Sbjct: 156 RWIPDPQARFETVAEL---LEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENV 215

Query: 181 -------------EEHLETFRPFKPILPFLYLEGEEEKRKLNAFEGFPMEREDGWMEIEM 240
                        EE    +  F   +   +   +  K  +      P  R+DGWMEI++
Sbjct: 216 AVEVVVGVVGQDLEESCRRYICFDETMDEQFRRRDRGKNLVK-----PERRKDGWMEIKI 275

Query: 241 GQFFTQG-----DDLSII-FNVYPTCLTCRFIFEGIEFRP 248
           G+FF +G     D++ ++             I +GIE RP
Sbjct: 276 GEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of Clc05G02920 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 88/265 (33.21%), Postives = 129/265 (48.68%), Query Frame = 0


Query: 2   NKLPVECICCILAFTSPKDVCKLAGVSTAFRSAAASDLLWRTFLPPDYPQIIAQSPSLSL 61
           +  P +CI  I++FT+P+D C  A VS  F S   SD++W  FLP DY  +I  S   S 
Sbjct: 15  DSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFS- 74

Query: 62  FWFLNSLPEKALYLHLSDHPLLIGTGNSTIALEKKSGKKCYMIGSRD---ICSRTMRHWT 121
                   +K LY  L + P+L      ++ LEK SGK+C M+ + +   I     ++W 
Sbjct: 75  -------SKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQ 134

Query: 122 RKYVPQSRFSYAADVEFGIQICIKGKIEAKNLSPKTYYAAYFVLKFEQEEHLETFRPFKP 181
              +P+SRF   A +       I+G+   + LSP+T Y+AY V  F+  +    F+    
Sbjct: 135 WIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIV--FKGVDKCYGFQNV-A 194

Query: 182 ILPFLYLEGEEEKRKLNAFEGF----------PMEREDGWMEIEMGQFFTQG---DDLSI 241
           I   + + G+E  R+L  F             P +REDGWMEIE+G+FF  G   D+  I
Sbjct: 195 IEAAVGVVGQEPSRRLICFSEAIRRGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEI 254

Query: 242 IFNVYPT---CLTCRFIFEGIEFRP 248
             +   T      C  I +GIE RP
Sbjct: 255 EMSALETKQLNRKCGLIIQGIEIRP 268

The following BLAST results are available for this feature:

BLAST of Clc05G02920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650883.2	7.8e-60	52.29	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650311.1 hypothetical prot...	[more]
XP_004134378.3	7.3e-58	51.15	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650310.1 hypothetical prot...	[more]
KAG6582459.1	9.6e-58	51.70	putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022924695.1	9.6e-58	51.70	putative F-box protein PP2-B12 [Cucurbita moschata]	[more]
XP_038905036.1	4.8e-57	51.71	LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida]	[more]

BLAST of Clc05G02920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6P4	1.4e-32	33.95	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q949S5	1.0e-30	37.60	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]
Q9FLU7	2.3e-30	35.86	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]
Q9ZVQ8	6.7e-30	31.07	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q9ZVQ6	1.5e-29	33.21	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]

BLAST of Clc05G02920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9G5	5.0e-60	52.29	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 ...	[more]
A0A6J1EFS1	4.6e-58	51.70	putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=...	[more]
A0A0A0L445	1.1e-56	50.38	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 ...	[more]
A0A6J1IZ41	1.5e-56	51.34	putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 ...	[more]
A0A0A0L6T0	2.2e-55	50.57	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 ...	[more]

BLAST of Clc05G02920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02240.1	1.0e-33	33.95	F-box family protein	[more]
AT1G80110.1	7.4e-32	37.60	phloem protein 2-B11	[more]
AT5G24560.1	1.6e-31	35.86	phloem protein 2-B12	[more]
AT2G02340.1	4.8e-31	31.07	phloem protein 2-B8	[more]
AT2G02360.1	1.1e-30	33.21	phloem protein 2-B10	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 4..44 e-value: 4.4E-5 score: 32.9
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 3..44 e-value: 6.9E-8 score: 32.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..44 score: 10.34529
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..55 e-value: 4.9E-9 score: 37.9
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 2..248
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 2..248
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 99..247 e-value: 1.8E-20 score: 73.5
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G02920.1	Clc05G02920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding