Clc04G13360 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTTTTTCTGTACATAGTTTGAATCTGGGAAGTTCATGGTCGAAGATACGGAAGTCAAAAACAGTGTTACCCCTATCAAAATCACACTTCTTTTGGATGATGGACCAGTTAGCAGACCTCCTTAGTGGTTCTAGTGTTCGTTTTTTCTTAAGGAATATGCGAGACGAATATGGAGCAATGAGAGTAGCGAAATTCAAGTCTAAACAGGGATGGAATTTAAGATGCGTAGTATGGCCAGTGTTCGGAGGACGGTATTTCATTCATATTCAAGAGGGGCCCAAGCAACAAGGATGGTCAGATGTTCTAAGGATGCTTAAAGACTTCATCCATAAAAGCGGGAGCGTTAAAAAGGAGTTGGAAAGGAAAGCAAAGTCTTCGGAGGCCACATCAGAGATCAGAGTCACGGATTTTCTCCCCTCTAATTAG ATGGCGACTTTTTCTGTACATAGTTTGAATCTGGGAAGTTCATGGTCGAAGATACGGAAGTCAAAAACAGTGTTACCCCTATCAAAATCACACTTCTTTTGGATGATGGACCAGTTAGCAGACCTCCTTAGTGGTTCTAGTGTTCGTTTTTTCTTAAGGAATATGCGAGACGAATATGGAGCAATGAGAGTAGCGAAATTCAAGTCTAAACAGGGATGGAATTTAAGATGCGTAGTATGGCCAGTGTTCGGAGGACGGTATTTCATTCATATTCAAGAGGGGCCCAAGCAACAAGGATGGTCAGATGTTCTAAGGATGCTTAAAGACTTCATCCATAAAAGCGGGAGCGTTAAAAAGGAGTTGGAAAGGAAAGCAAAGTCTTCGGAGGCCACATCAGAGATCAGAGTCACGGATTTTCTCCCCTCTAATTAG ATGGCGACTTTTTCTGTACATAGTTTGAATCTGGGAAGTTCATGGTCGAAGATACGGAAGTCAAAAACAGTGTTACCCCTATCAAAATCACACTTCTTTTGGATGATGGACCAGTTAGCAGACCTCCTTAGTGGTTCTAGTGTTCGTTTTTTCTTAAGGAATATGCGAGACGAATATGGAGCAATGAGAGTAGCGAAATTCAAGTCTAAACAGGGATGGAATTTAAGATGCGTAGTATGGCCAGTGTTCGGAGGACGGTATTTCATTCATATTCAAGAGGGGCCCAAGCAACAAGGATGGTCAGATGTTCTAAGGATGCTTAAAGACTTCATCCATAAAAGCGGGAGCGTTAAAAAGGAGTTGGAAAGGAAAGCAAAGTCTTCGGAGGCCACATCAGAGATCAGAGTCACGGATTTTCTCCCCTCTAATTAG MATFSVHSLNLGSSWSKIRKSKTVLPLSKSHFFWMMDQLADLLSGSSVRFFLRNMRDEYGAMRVAKFKSKQGWNLRCVVWPVFGGRYFIHIQEGPKQQGWSDVLRMLKDFIHKSGSVKKELERKAKSSEATSEIRVTDFLPSN Homology
BLAST of Clc04G13360 vs. NCBI nr
Match: XP_038884899.1 (uncharacterized protein LOC120075514 [Benincasa hispida]) HSP 1 Score: 65.9 bits (159), Expect = 3.3e-07 Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 0
BLAST of Clc04G13360 vs. NCBI nr
Match: KAA0063414.1 (uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa] >TYK11672.1 uncharacterized protein E5676_scaffold828G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 2.8e-06 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of Clc04G13360 vs. NCBI nr
Match: KAE8649297.1 (hypothetical protein Csa_015271, partial [Cucumis sativus]) HSP 1 Score: 62.8 bits (151), Expect = 2.8e-06 Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Clc04G13360 vs. NCBI nr
Match: TYK14531.1 (CWF19-like protein 2-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-05 Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0
BLAST of Clc04G13360 vs. ExPASy TrEMBL
Match: A0A5A7V878 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00460 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of Clc04G13360 vs. ExPASy TrEMBL
Match: A0A5D3CRV4 (CWF19-like protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00100 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05 Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|