Clc04G12890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G12890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	TCP domain-containing protein
Location	ClcChr04: 26198321 .. 26200658 (+)
RNA-Seq Expression	Clc04G12890
Synteny	Clc04G12890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATTACTCCCCATTCCAAAACCAAACATCTAAAACCCCTTTCAAAGTTGAAGCCATTTATTTATTTTCTCTTCAATTCCTGACGATCTACATTATTGAGACCCACCAGAGATCCAAATTAAGAGATCATAATTTGAAGAGTGATGGAAGCTGGAAATGACCAACTTCAGTATCACCAAAACCATCGCTCAACAACTTCTTTTCCTCTCCAATTGTTAGAGAAGAAGGAATATGATAATAATCCCCAACCTCCCCTTGACATCATCTCTAAGAAGCCCTCTCCCAAGAGAACTTCTACTAAGGACCGCCACACCAAAGTGGACGGCCGCGGTCGTCGCACCCGAATGCCTGCTCTTTGTGCTGCTAGAGTTTTCCAGCTCACTCGTGAGCTCGGCCACAAGTCCGATGGCGAAACCATTGAATGGCTTCTTCAACAGGCGGAGCCTGCCGTTATCGCCGCCACCGGGACCGGTACTATTCCTGCAAACTTTAACTCTCTCAACACGTCGTTGAGAAGATCGGCCACAAGCATTTCTTTGCCATCTCAACTAAGATCCTCATCTTACTACCACCCCGGAGGTAGGCTGAACACTTTTTAAGATATCTATTTTTCATATATATGATTCTTTTCAATTACATCCTTTCAAATGCCTTCCATTTTAAGAAGTCTTACTGATTTTTTTAATCTTTCCCATTAAAATTCCCATTGAGTTGCAGTTTAGATGTTCTCCGTGTGTGTAGGAGGAAGAACAATAATCTAAAGTCCTATTTTTAAAAATATTGGGATTCTTTTCTTACTATTTATTTACAACATTTTATCATTTCTAAGTAAAAGAGAATTAAATTCTTATAACTTTAACTTTCAAAAATAAAAAACTAAAAATCAATCTCCCTACGGTAACTATTTGGTTTTTAGTTTTTTATTTTTGAAAATTAAGCTTATAATAACATCACAACCATCAATCGGTTTAGGTGTTTTGTCATCTAAATTTTAGGACTGTTTTCAAAATCAAAGCCAAATTAAAATATTAAAAAAAAAAAAATAGGCTTTCAAAATTTTGTTGTTGTCTTTTTAAAATAGGCTAAAATTTAAATGTTTATATAGAAAATACGAAAATTATGAATAGAAAATTGTGAGAAAACGAACACAATTCCTAGAAAGAAAGAAAAAGAAAACCGAAGAGTTAACACAAGTGCCTAAAATTTTATCACAATAGGGCCTAAATAAACAAAAGGAGTATTTTCCTTGCTTTCTCTCACTCTCAAGATCCATGAAAAAAAAAAAAAAAAAAAAGAGACCTTTCACTTACAAGTTAGAAAGAAAGTTTATCCTTAAAAAAATAATAATAATAAAATAAAATAAAATAGGGGTAAGAAGATCAAGTAAAAAGAATGTGATAACCTTCATTTGCCTTTATGTTATGTATCATTGATTCCCATGAAATGATTAAGGTATAGTATTATTTTTTAAATAAAAAAAAAAAAAAAAAAGAGACCTTTCACTTACAAGTTAGAAAGAAAGTTTATCCTTAAAAAAATAATAATAATAAAATAAAATAAAATAGGGGTAAGAAGATCAAGTAAAAAGAATGTGATAACCTTCATTTGCCTTTATGTTATGTATCATTGATTCCCATGAAATGATTAAGGTATAGTATTATTTTTTAAATAAAAAAAAAAAAAAAAAGTGTGGGAGGGTTTTGAAAGGGAGAAATTAGGCTAATGGAATATGATTAAAGTTGTTCAGTGATGGGGTTCAACTCTGAAGCAATAACTAATAATATGACGCAACCAAAAGAAGATCATCACTATCTACACCAATCCACCACGGGCCTAATCCCCACTACGATTCCGGCCAACTTTTGGATGCTTTCCGACGCCAACAACCAATTACTCGGCGGCGGAGGCGACTCTCTATGGAGGGTTCAGTCGGCCAACAACCAAGACGCCGCTTTATATAGATTAGGACAACCCTCCGGTGGTAATAATTTACGTTTATCCAATAATCTGGCTGCTCCATTGACGCTCCTCCCTGGAAAGCCACTCTCTTTGGGACCCACTGCCGGAGGTGGACGTGGAACCATGAATGATGACGGACACTTGAATATCTACGCCGCCCAAGATCCGCCGCATGGGGCGGCTCCCGACACCGGCGTCTCCTAATGATAATTGTTGCCTATGCCTTTCCGTACTAATTTCTTCATATATTATGTATATGGTTTGAGACGTGAGGTTAGACATATGATTCTCTTCTCATAACAATCCTTCTTATTACCTATTCATTTTCAGTTTATTATTGTTTCTTTTTCTCTTTTTAATATTTCTCAATATACCC

mRNA sequence

TATATATTACTCCCCATTCCAAAACCAAACATCTAAAACCCCTTTCAAAGTTGAAGCCATTTATTTATTTTCTCTTCAATTCCTGACGATCTACATTATTGAGACCCACCAGAGATCCAAATTAAGAGATCATAATTTGAAGAGTGATGGAAGCTGGAAATGACCAACTTCAGTATCACCAAAACCATCGCTCAACAACTTCTTTTCCTCTCCAATTGTTAGAGAAGAAGGAATATGATAATAATCCCCAACCTCCCCTTGACATCATCTCTAAGAAGCCCTCTCCCAAGAGAACTTCTACTAAGGACCGCCACACCAAAGTGGACGGCCGCGGTCGTCGCACCCGAATGCCTGCTCTTTGTGCTGCTAGAGTTTTCCAGCTCACTCGTGAGCTCGGCCACAAGTCCGATGGCGAAACCATTGAATGGCTTCTTCAACAGGCGGAGCCTGCCGTTATCGCCGCCACCGGGACCGGTACTATTCCTGCAAACTTTAACTCTCTCAACACGTCGTTGAGAAGATCGGCCACAAGCATTTCTTTGCCATCTCAACTAAGATCCTCATCTTACTACCACCCCGGAGTGATGGGGTTCAACTCTGAAGCAATAACTAATAATATGACGCAACCAAAAGAAGATCATCACTATCTACACCAATCCACCACGGGCCTAATCCCCACTACGATTCCGGCCAACTTTTGGATGCTTTCCGACGCCAACAACCAATTACTCGGCGGCGGAGGCGACTCTCTATGGAGGGTTCAGTCGGCCAACAACCAAGACGCCGCTTTATATAGATTAGGACAACCCTCCGGTGGTAATAATTTACGTTTATCCAATAATCTGGCTGCTCCATTGACGCTCCTCCCTGGAAAGCCACTCTCTTTGGGACCCACTGCCGGAGGTGGACGTGGAACCATGAATGATGACGGACACTTGAATATCTACGCCGCCCAAGATCCGCCGCATGGGGCGGCTCCCGACACCGGCGTCTCCTAATGATAATTGTTGCCTATGCCTTTCCGTACTAATTTCTTCATATATTATGTATATGGTTTGAGACGTGAGGTTAGACATATGATTCTCTTCTCATAACAATCCTTCTTATTACCTATTCATTTTCAGTTTATTATTGTTTCTTTTTCTCTTTTTAATATTTCTCAATATACCC

Coding sequence (CDS)

ATGGAAGCTGGAAATGACCAACTTCAGTATCACCAAAACCATCGCTCAACAACTTCTTTTCCTCTCCAATTGTTAGAGAAGAAGGAATATGATAATAATCCCCAACCTCCCCTTGACATCATCTCTAAGAAGCCCTCTCCCAAGAGAACTTCTACTAAGGACCGCCACACCAAAGTGGACGGCCGCGGTCGTCGCACCCGAATGCCTGCTCTTTGTGCTGCTAGAGTTTTCCAGCTCACTCGTGAGCTCGGCCACAAGTCCGATGGCGAAACCATTGAATGGCTTCTTCAACAGGCGGAGCCTGCCGTTATCGCCGCCACCGGGACCGGTACTATTCCTGCAAACTTTAACTCTCTCAACACGTCGTTGAGAAGATCGGCCACAAGCATTTCTTTGCCATCTCAACTAAGATCCTCATCTTACTACCACCCCGGAGTGATGGGGTTCAACTCTGAAGCAATAACTAATAATATGACGCAACCAAAAGAAGATCATCACTATCTACACCAATCCACCACGGGCCTAATCCCCACTACGATTCCGGCCAACTTTTGGATGCTTTCCGACGCCAACAACCAATTACTCGGCGGCGGAGGCGACTCTCTATGGAGGGTTCAGTCGGCCAACAACCAAGACGCCGCTTTATATAGATTAGGACAACCCTCCGGTGGTAATAATTTACGTTTATCCAATAATCTGGCTGCTCCATTGACGCTCCTCCCTGGAAAGCCACTCTCTTTGGGACCCACTGCCGGAGGTGGACGTGGAACCATGAATGATGACGGACACTTGAATATCTACGCCGCCCAAGATCCGCCGCATGGGGCGGCTCCCGACACCGGCGTCTCCTAA

Protein sequence

MEAGNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQPKEDHHYLHQSTTGLIPTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS

Homology

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BLAST of Clc04G12890 vs. NCBI nr
Match: XP_038895370.1 (transcription factor TCP15-like [Benincasa hispida])

HSP 1 Score: 497.7 bits (1280), Expect = 6.8e-137
Identity = 257/283 (90.81%), Postives = 263/283 (92.93%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           GNDQL YHQNHRSTTSFPLQLLEKKEYD NPQPPL+IISKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GNDQLHYHQNHRSTTSFPLQLLEKKEYD-NPQPPLEIISKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAITN--NMTQPKEDHHYLHQSTTGLIPTTIP 183
           RRSATSISLPSQLRSSSYYHPGVMG NSEA+ N   MTQPK+DHHYL QSTTGLIP T P
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMGINSEAMNNMAQMTQPKQDHHYLQQSTTGLIPATTP 182

Query: 184 ANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLP 243
           ANFWMLSD NNQLLG GGD LWR+QSANNQD AL+R GQPSGG  LR S NLAAPLTLLP
Sbjct: 183 ANFWMLSDPNNQLLGSGGDPLWRLQSANNQDGALFRSGQPSGG--LRFS-NLAAPLTLLP 242

Query: 244 GKPLSLGP-TAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS 284
           GKPLSLGP TAGGGRGTMNDDGHLNIYAAQ+PPHGAAPDTGVS
Sbjct: 243 GKPLSLGPTTAGGGRGTMNDDGHLNIYAAQNPPHGAAPDTGVS 281

[Close]

BLAST of Clc04G12890 vs. NCBI nr
Match: XP_004137578.1 (transcription factor TCP15 [Cucumis sativus] >KGN63984.1 hypothetical protein Csa_013211 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 6.8e-121
Identity = 243/301 (80.73%), Postives = 255/301 (84.72%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GNDQLHYHQNHRSNASFPLQLLEKKEYD--PQPPLEIVSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI 183
           RRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMGFNSEAM-NNMVQITTQLPKEDHQYHLHQSTTTGVV 182

Query: 184 -PTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL-- 243
            PTTIPANFWMLSD NNQLL  G D LWR+QSA NQD +L+R GQPS    LRLSNN+  
Sbjct: 183 PPTTIPANFWMLSDPNNQLLASGVDPLWRLQSA-NQDGSLFRSGQPSPSGGLRLSNNILG 242

Query: 244 -AAPLTLLPGKPLSLGPTAGGG-RGTMNDD---------GHLNIYAAQDPPHGAAPDTGV 284
             APLTLLPGKPLSLGPTAG   RG +N+D         GHLNIYA Q+PPHGAAPDTGV
Sbjct: 243 GPAPLTLLPGKPLSLGPTAGAARRGNLNNDHDDDDDDHNGHLNIYATQNPPHGAAPDTGV 299

[Close]

BLAST of Clc04G12890 vs. NCBI nr
Match: XP_008440976.1 (PREDICTED: transcription factor TCP15-like [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-120
Identity = 243/299 (81.27%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GNDQLHYHQNHRSNASFPLQLLEKKEYD--PQPPLEIVSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI 183
           RRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMGFNSEAM-NNMVQITTQLPKEDHQYHLHQSTTTGVV 182

Query: 184 -PTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL-- 243
            PT IPANFWMLSD NNQLL  G D LWR+QSA NQD +L+R GQ S    LRLSNN+  
Sbjct: 183 PPTNIPANFWMLSDPNNQLLASGVDPLWRLQSA-NQDGSLFRSGQSSPSGGLRLSNNILG 242

Query: 244 AAPLTLLPGKPLSLGPTAGGG-RGTMN--------DDGHLNIYAAQDPPHGAAPDTGVS 284
            APLTLLPGKPLSLGPTAG   RG +N        DDGHLNIYAAQ+PPHGAAPDTGVS
Sbjct: 243 PAPLTLLPGKPLSLGPTAGAARRGNLNDHDDDDDDDDGHLNIYAAQNPPHGAAPDTGVS 297

[Close]

BLAST of Clc04G12890 vs. NCBI nr
Match: KAG7020042.1 (Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.7 bits (997), Expect = 4.4e-104
Identity = 221/287 (77.00%), Postives = 235/287 (81.88%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           G+DQ+ YH  HR  TSFPLQLLEKKEYD  PQPP +  SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GSDQIHYH--HRPPTSFPLQLLEKKEYD--PQPPPE-PSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAIT-NNMTQPKEDH------HYLHQSTTGLI 183
           RRSATSISLPSQLRSSSYYHPGVM FNS+ +    MT  KEDH       Y+ QSTTGL+
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMAFNSQPMNMGPMTHAKEDHLPDPQRSYVQQSTTGLL 182

Query: 184 PTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAP 243
           PTTIPANFWM SD N+QLL GGGDSLWR+  A NQD ALYR GQ SG  ++R S NLAAP
Sbjct: 183 PTTIPANFWMFSDGNSQLLSGGGDSLWRLPPA-NQDNALYR-GQASG--SVRFS-NLAAP 242

Query: 244 LTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDTGVS 284
           LTLLPGKP  LGP+  G  G+MN DGH+NIYA Q   HGAAPD  VS
Sbjct: 243 LTLLPGKP--LGPSGSG--GSMN-DGHMNIYAGQSRAHGAAPDNSVS 274

[Close]

BLAST of Clc04G12890 vs. NCBI nr
Match: KAG6584451.1 (HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.4 bits (960), Expect = 8.7e-100
Identity = 213/275 (77.45%), Postives = 228/275 (82.91%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           G+DQ+ YH  HR  TSFPLQLLEKKEYD  PQPP +  SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GSDQIHYH--HRPPTSFPLQLLEKKEYD--PQPPPE-PSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAIT-NNMTQPKEDH------HYLHQSTTGLI 183
           RRSATSISLPSQLRSSSYYHPGVM FNS+ +    MT  KEDH       Y+ QSTTGL+
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMAFNSQPMNMGPMTHAKEDHLPDPQRSYVQQSTTGLL 182

Query: 184 PTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAP 243
           PTTIPANFWM SD N+QLL GGGDSLWR+  A NQD ALYR GQ SG  ++R S NLAAP
Sbjct: 183 PTTIPANFWMFSDGNSQLLSGGGDSLWRLPPA-NQDNALYR-GQASG--SVRFS-NLAAP 242

Query: 244 LTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQD 272
           LTLLPGKP  LGP+  G  G+MN DGH+NIYA Q+
Sbjct: 243 LTLLPGKP--LGPSGSG--GSMN-DGHMNIYAGQN 262

[Close]

BLAST of Clc04G12890 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.4e-49
Identity = 137/307 (44.63%), Postives = 166/307 (54.07%), Query Frame = 0


Query: 13  NHRSTTSFPLQLLEKKEYDNNPQPPLDIIS---------KKPSPKRTSTKDRHTKVDGRG 72
           +H    +FPLQLL+     ++    L IIS         KKP PKRTSTKDRHTKV+GRG
Sbjct: 6   DHNHRPNFPLQLLDSS--TSSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRG 65

Query: 73  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 132
           RR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF SLN SL
Sbjct: 66  RRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISL 125

Query: 133 RRSATSISLPSQLR---SSSYYHPGVMGFNSEAITNNMTQPKEDHH-------------- 192
           R S +S+S  + LR   SS Y+H             +  +PK + H              
Sbjct: 126 RSSRSSLS-AAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKNESHSSSSSSSQLLDHNQ 185

Query: 193 ---YLHQSTTGLIPTT---IPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALY---- 252
              YL QST G +PT+     A FW   D N Q       +LW      +    +     
Sbjct: 186 MGNYLVQSTAGSLPTSQSPATAPFWSSGD-NTQ-------NLWAFNINPHHSGVVAGDVY 245

Query: 253 --RLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPH 282
               G   GG+ + L  N AAP+ L  G+PL+ G   GGG G   +  H  + AA +  +
Sbjct: 246 NPNSGGSGGGSGVHLM-NFAAPIALFSGQPLASGYGGGGGGG--GEHSHYGVLAALNAAY 298

[Close]

BLAST of Clc04G12890 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.8e-39
Identity = 90/137 (65.69%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 11  HQNHRSTTSFPLQLLEK-------KEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 70
           HQ+ + + S P    +K       KE     +    + +KKP  KR STKDRHTKVDGRG
Sbjct: 69  HQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRG 128

Query: 71  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 130
           RR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEP+VIAATGTGTIPANF SLN SL
Sbjct: 129 RRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISL 188

Query: 131 RRSATSISLPSQLRSSS 141
           R S +S+SLPS  RS++
Sbjct: 189 RSSGSSMSLPSHFRSAA 205

[Close]

BLAST of Clc04G12890 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 8.6e-34
Identity = 70/85 (82.35%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 49  RTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG 108
           + STKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPA++AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 109 TGTIPANFNSLNTSLRRSATSISLP 134
           TGTIPANF++L+ SLR S +++S P
Sbjct: 117 TGTIPANFSTLSVSLRSSGSTLSAP 141

[Close]

BLAST of Clc04G12890 vs. ExPASy Swiss-Prot
Match: Q9LQF0 (Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.3e-33
Identity = 79/146 (54.11%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 34  PQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIE 93
           P      ++   +P +  +KDRH KVDGRGRR RMPA+CAARVFQLTREL HKSDGETIE
Sbjct: 37  PNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIE 96

Query: 94  WLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEA 153
           WLLQQAEPA+IAATGTGTIPAN ++LN SLR S +++S P     S  +H G    N+ A
Sbjct: 97  WLLQQAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAP----LSKSFHMGRAAQNA-A 156

Query: 154 ITNNMTQPKEDHHYLHQSTTGLIPTT 180
           +     Q    HH    S++  +P T
Sbjct: 157 VFGFQQQLYHPHHITTDSSSSSLPKT 177

[Close]

BLAST of Clc04G12890 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-32
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 52  TKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT 111
           TKDRHTKV+GRGRR RMPALCAARVFQLTRELGHK+DGETIEWLLQQAEPA++AATGTGT
Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGT 211

Query: 112 IPANFNSLNTSLRRSATSISLPSQLRSSSYYH 144
           IPANF+SL  SLR +A+  S P   R++ ++H
Sbjct: 212 IPANFSSLAVSLRSAASHSSSP---RAAPFHH 240

[Close]

BLAST of Clc04G12890 vs. ExPASy TrEMBL
Match: A0A0A0LSM3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033030 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.3e-121
Identity = 243/301 (80.73%), Postives = 255/301 (84.72%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GNDQLHYHQNHRSNASFPLQLLEKKEYD--PQPPLEIVSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI 183
           RRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMGFNSEAM-NNMVQITTQLPKEDHQYHLHQSTTTGVV 182

Query: 184 -PTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL-- 243
            PTTIPANFWMLSD NNQLL  G D LWR+QSA NQD +L+R GQPS    LRLSNN+  
Sbjct: 183 PPTTIPANFWMLSDPNNQLLASGVDPLWRLQSA-NQDGSLFRSGQPSPSGGLRLSNNILG 242

Query: 244 -AAPLTLLPGKPLSLGPTAGGG-RGTMNDD---------GHLNIYAAQDPPHGAAPDTGV 284
             APLTLLPGKPLSLGPTAG   RG +N+D         GHLNIYA Q+PPHGAAPDTGV
Sbjct: 243 GPAPLTLLPGKPLSLGPTAGAARRGNLNNDHDDDDDDHNGHLNIYATQNPPHGAAPDTGV 299

[Close]

BLAST of Clc04G12890 vs. ExPASy TrEMBL
Match: A0A1S3B2E2 (transcription factor TCP15-like OS=Cucumis melo OX=3656 GN=LOC103485203 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.6e-121
Identity = 243/299 (81.27%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GNDQLHYHQNHRSNASFPLQLLEKKEYD--PQPPLEIVSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPGVMGFNSEAITNNMTQ-----PKEDHHY-LHQS-TTGLI 183
           RRSATSISLPSQLRSSSYYHPGVMGFNSEA+ NNM Q     PKEDH Y LHQS TTG++
Sbjct: 123 RRSATSISLPSQLRSSSYYHPGVMGFNSEAM-NNMVQITTQLPKEDHQYHLHQSTTTGVV 182

Query: 184 -PTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNL-- 243
            PT IPANFWMLSD NNQLL  G D LWR+QSA NQD +L+R GQ S    LRLSNN+  
Sbjct: 183 PPTNIPANFWMLSDPNNQLLASGVDPLWRLQSA-NQDGSLFRSGQSSPSGGLRLSNNILG 242

Query: 244 AAPLTLLPGKPLSLGPTAGGG-RGTMN--------DDGHLNIYAAQDPPHGAAPDTGVS 284
            APLTLLPGKPLSLGPTAG   RG +N        DDGHLNIYAAQ+PPHGAAPDTGVS
Sbjct: 243 PAPLTLLPGKPLSLGPTAGAARRGNLNDHDDDDDDDDGHLNIYAAQNPPHGAAPDTGVS 297

[Close]

BLAST of Clc04G12890 vs. ExPASy TrEMBL
Match: A0A6J1C776 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111008639 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.8e-93
Identity = 203/303 (67.00%), Postives = 224/303 (73.93%), Query Frame = 0


Query: 1   MEAGN-DQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDII---SKKPSPKRTSTKDRH 60
           ME G+ +QL Y QNH  +T+FPLQLLEKKEYD++ Q   +++   SKKPS KRT+TKDRH
Sbjct: 1   MEQGSYEQLHYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRH 60

Query: 61  TKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF 120
           TKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF
Sbjct: 61  TKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF 120

Query: 121 NSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAITN--NMTQPKEDH--------- 180
           NSLNTSLRRSATSISLPSQLRSSSYYHPGV+ FNS+   N   MTQ KEDH         
Sbjct: 121 NSLNTSLRRSATSISLPSQLRSSSYYHPGVIPFNSQLPINMGEMTQAKEDHLGGQDPHRQ 180

Query: 181 --HYLHQSTTGLIPTTIPANFWMLSDANNQLLGGGGDSLWR---VQSANNQDAALYRLGQ 240
              YL Q + G     IPANFWMLSD N+       +SLWR   + S NNQD      G 
Sbjct: 181 MGSYLLQPSAG-AGANIPANFWMLSDGNS------AESLWRLPIIPSLNNQD------GT 240

Query: 241 PSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGAAPDT 284
            SG   LRL+N    PLTLLPGKPL+LGPT G   GT+ +  HLNIYAAQ+PP GA PDT
Sbjct: 241 ASGSGGLRLTNLAGGPLTLLPGKPLALGPTDG---GTIINQAHLNIYAAQNPPQGALPDT 287

[Close]

BLAST of Clc04G12890 vs. ExPASy TrEMBL
Match: A0A5D3BGG0 (Transcription factor TCP15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00760 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.1e-67
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 4   GNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 63
           GNDQL YHQNHRS  SFPLQLLEKKEYD  PQPPL+I+SKKPSPKRTSTKDRHTKVDGRG
Sbjct: 3   GNDQLHYHQNHRSNASFPLQLLEKKEYD--PQPPLEIVSKKPSPKRTSTKDRHTKVDGRG 62

Query: 64  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 123
           RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL
Sbjct: 63  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 122

Query: 124 RRSATSISLPSQLRSSSYYHPG 146
           RRSATSISLPSQLRSSSYYHPG
Sbjct: 123 RRSATSISLPSQLRSSSYYHPG 142

[Close]

BLAST of Clc04G12890 vs. ExPASy TrEMBL
Match: A0A061FY58 (TCP domain-like protein I OS=Theobroma cacao OX=3641 GN=TCM_013943 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.9e-61
Identity = 164/351 (46.72%), Postives = 195/351 (55.56%), Query Frame = 0


Query: 10  YHQNHRSTTSFPLQLLEKKEYDNNP-----QPPLDII----------------------- 69
           +H +H    +FP QLLEKKE DN P      PP   +                       
Sbjct: 15  HHLHHHHRPNFPFQLLEKKEEDNQPCSSSSSPPFPSLPASSSNDQPNTTRPISSLQISPE 74

Query: 70  -SKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 129
            SKKP PKRTSTKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAE
Sbjct: 75  PSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 134

Query: 130 PAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYH----------------- 189
           PAVIAATGTGTIPANF SLN SLR S +S+S+PSQLRSS +                   
Sbjct: 135 PAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSGFNSNFSMQQRRSLFPGIGLE 194

Query: 190 --PGVMGFNSEAITNNMTQPKED----------------------------------HHY 249
             P  + F S +  N+M Q K++                                    Y
Sbjct: 195 TTPAFLNFQSSSNLNSMFQAKQELRDNSTSLEISETEEGTLGRKRRPEPDLSSQHQMGSY 254

Query: 250 LHQSTTGLIPTT---IPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGG 273
           L QS+TG IP +   IPANFWM++++NNQ++   GD +W   S NN  +ALYR G  S G
Sbjct: 255 LLQSSTGAIPASHGQIPANFWMVTNSNNQVM--SGDPIWTFPSVNN--SALYR-GTMSSG 314

[Close]

BLAST of Clc04G12890 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 195.3 bits (495), Expect = 6.7e-50
Identity = 137/307 (44.63%), Postives = 166/307 (54.07%), Query Frame = 0


Query: 13  NHRSTTSFPLQLLEKKEYDNNPQPPLDIIS---------KKPSPKRTSTKDRHTKVDGRG 72
           +H    +FPLQLL+     ++    L IIS         KKP PKRTSTKDRHTKV+GRG
Sbjct: 6   DHNHRPNFPLQLLDSS--TSSSSTSLAIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRG 65

Query: 73  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 132
           RR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF SLN SL
Sbjct: 66  RRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISL 125

Query: 133 RRSATSISLPSQLR---SSSYYHPGVMGFNSEAITNNMTQPKEDHH-------------- 192
           R S +S+S  + LR   SS Y+H             +  +PK + H              
Sbjct: 126 RSSRSSLS-AAHLRTTPSSYYFHSPHQSMTHHLQHQHQVRPKNESHSSSSSSSQLLDHNQ 185

Query: 193 ---YLHQSTTGLIPTT---IPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALY---- 252
              YL QST G +PT+     A FW   D N Q       +LW      +    +     
Sbjct: 186 MGNYLVQSTAGSLPTSQSPATAPFWSSGD-NTQ-------NLWAFNINPHHSGVVAGDVY 245

Query: 253 --RLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPH 282
               G   GG+ + L  N AAP+ L  G+PL+ G   GGG G   +  H  + AA +  +
Sbjct: 246 NPNSGGSGGGSGVHLM-NFAAPIALFSGQPLASGYGGGGGGG--GEHSHYGVLAALNAAY 298

[Close]

BLAST of Clc04G12890 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 162.5 bits (410), Expect = 4.8e-40
Identity = 90/137 (65.69%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 11  HQNHRSTTSFPLQLLEK-------KEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRG 70
           HQ+ + + S P    +K       KE     +    + +KKP  KR STKDRHTKVDGRG
Sbjct: 69  HQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRG 128

Query: 71  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 130
           RR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEP+VIAATGTGTIPANF SLN SL
Sbjct: 129 RRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISL 188

Query: 131 RRSATSISLPSQLRSSS 141
           R S +S+SLPS  RS++
Sbjct: 189 RSSGSSMSLPSHFRSAA 205

[Close]

BLAST of Clc04G12890 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 145.6 bits (366), Expect = 6.1e-35
Identity = 70/85 (82.35%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 49  RTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATG 108
           + STKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPA++AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 109 TGTIPANFNSLNTSLRRSATSISLP 134
           TGTIPANF++L+ SLR S +++S P
Sbjct: 117 TGTIPANFSTLSVSLRSSGSTLSAP 141

[Close]

BLAST of Clc04G12890 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-34
Identity = 79/146 (54.11%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 34  PQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIE 93
           P      ++   +P +  +KDRH KVDGRGRR RMPA+CAARVFQLTREL HKSDGETIE
Sbjct: 37  PNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIE 96

Query: 94  WLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEA 153
           WLLQQAEPA+IAATGTGTIPAN ++LN SLR S +++S P     S  +H G    N+ A
Sbjct: 97  WLLQQAEPAIIAATGTGTIPANISTLNISLRSSGSTLSAP----LSKSFHMGRAAQNA-A 156

Query: 154 ITNNMTQPKEDHHYLHQSTTGLIPTT 180
           +     Q    HH    S++  +P T
Sbjct: 157 VFGFQQQLYHPHHITTDSSSSSLPKT 177

[Close]

BLAST of Clc04G12890 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-33
Identity = 71/95 (74.74%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 46  SPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 105
           S  +  TKDRHTKVDGRGRR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPA+IA
Sbjct: 57  SAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIA 116

Query: 106 ATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS 141
           +TGTGTIPANF++LN SLR    S       +SSS
Sbjct: 117 STGTGTIPANFSTLNASLRSGGGSTLFSQASKSSS 151

The following BLAST results are available for this feature:

BLAST of Clc04G12890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895370.1	6.8e-137	90.81	transcription factor TCP15-like [Benincasa hispida]	[more]
XP_004137578.1	6.8e-121	80.73	transcription factor TCP15 [Cucumis sativus] >KGN63984.1 hypothetical protein Cs...	[more]
XP_008440976.1	1.2e-120	81.27	PREDICTED: transcription factor TCP15-like [Cucumis melo]	[more]
KAG7020042.1	4.4e-104	77.00	Transcription factor TCP15, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6584451.1	8.7e-100	77.45	HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Clc04G12890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9L2	9.4e-49	44.63	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q93Z00	6.8e-39	65.69	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C518	8.6e-34	82.35	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9LQF0	4.3e-33	54.11	Transcription factor TCP23 OS=Arabidopsis thaliana OX=3702 GN=TCP23 PE=1 SV=1	[more]
Q53PH2	3.6e-32	76.09	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]

BLAST of Clc04G12890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSM3	3.3e-121	80.73	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033030 PE=4 SV...	[more]
A0A1S3B2E2	5.6e-121	81.27	transcription factor TCP15-like OS=Cucumis melo OX=3656 GN=LOC103485203 PE=4 SV=...	[more]
A0A6J1C776	3.8e-93	67.00	transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111008639 P...	[more]
A0A5D3BGG0	2.1e-67	95.07	Transcription factor TCP15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A061FY58	2.9e-61	46.72	TCP domain-like protein I OS=Theobroma cacao OX=3641 GN=TCM_013943 PE=4 SV=1	[more]

BLAST of Clc04G12890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69690.1	6.7e-50	44.63	TCP family transcription factor	[more]
AT3G47620.1	4.8e-40	65.69	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G58100.1	6.1e-35	82.35	TCP family transcription factor	[more]
AT1G35560.1	3.0e-34	54.11	TCP family transcription factor	[more]
AT1G72010.1	4.4e-33	74.74	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 50..155 e-value: 7.7E-36 score: 124.0
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 52..106 score: 27.427216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	PANTHER	PTHR31072:SF170	TRANSCRIPTION FACTOR TCP23	coord: 40..161
None	No IPR available	PANTHER	PTHR31072:SF170	TRANSCRIPTION FACTOR TCP23	coord: 162..272
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 40..161
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 162..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G12890.1	Clc04G12890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding