Clc04G12540 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G12540
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr04: 25987857 .. 25995701 (-)
RNA-Seq ExpressionClc04G12540
SyntenyClc04G12540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTTAACCAAACCGCCATTCCCGCCATTGGAAGTAGCTCCAGAGTTAGGCAACAATTTCTTTTCTCTGTATTAAAGTGCTGTCTATCTGTTCGTAATCTTGCGAAAATCCATGCTCAAATAGTCGTCAGCGGCTTTGCCCAGAAAAATTACATCCTTGTCAATCTTTTGTCGCTCTATATCTCTTTTGGTTCTCTTGGAAGTGCCCAGAAAGTTTTCGAGGATATTAGGACACCGAGTACGACTGTGTGGAACCAGATAATTAGAGGCCATGCGCGGAGCAAAACGCCACAAGAATCGATTGAGCTGTTCAAACGAATGACAGTGGCGGAAGTTGAGGCTGATGGGTTCACGTATTCGTTTCTTCTGAGTGCGTGTGTGAGATCGAGGTTATTCAGAGAGGGGGAACAGATTCATGGGAGAGTTTTAGCAAATGGGTATTGGTCCAACTTGTATGTTAGAACGAATTTGATCAATTTATACGCAAATGGTGGAGGTCGAGGGGATTTTGATCTTAAGCGTGCGCGTTACATGTTTGATGAAATGCCTGACTCAAATGTCGTGGGTTGGAATTCCTTGCTCGCAGGGTATGTTAGACGTGGTGATTTTGATGGGGCTAGAAAAGTTTTTGACGAGATGCCTGAAAGGAATGTCCAGACATGGACTACAATGGTTGCAGGGCTTGCTCAAAATGGCCATTGTAAGCTAGCTTTGTCACTATTTAATCAAATGAGAAGGGCTGGTGTGGAATTGGATCAAGTGGCGTTGGTGGCTGCATTGTCAGCTTGTGCTGAATTGGGAGACTTGACATTGGGAAAATGGATTCATAGGTATGTTGAAAGAACATGGCGGAGTAGACACTTCCCTGTCTTGGTGTCTCTGAACAATGCTCTGATGCATATGTATGCAAGTTGTGGTGTTATGGATTTAGCATATAAAGTGTTTGAAGAAATGCCCCAACGAAACACCGTGTCTTGGTCAAGCATTATCACTGGGTTTGCGAAACAGGGTTGTGGAGAAGAAGCCATTAGAGTCTTTCAGTTGATGCTGTGCTCTGGCCAAAATGAAGTTAGACCTGACGAGATAACCTTCATCGGAGTTCTCACTGCTTGTAGTCATGCCGGTTTGATCATCGACGGCATCCGAGTTTTCCAGTCTATGCACAAAACTTTCGGAGTCATCCCGCAGATTGAGCATTATGGATGCATGGTTGATCTCTTAAGCCGTGCAGGTTTACTGAGTGAAGCGTTGAGGCTGATTGAAAGTATGCCAATGAAGCCAAATAATGCTGTGTGGGGAGCACTTCTCAGCGGCTGTAGAATTCACAAGAACGACGAGATCGCATCCCATGTTGCGAAACAATTGGCTTTCGAAATCGATCCCAGCAAACAGGCTGCTGGATACTTCATGCTCCTAGCTAATGTTTATGCTGCAGACAAACGTTGGCGAGACACTGCCATTGTGAGACAGAACATGCTCGACATAGGAGTGAAGAAACCTTCAGGAAGAAGTTGGATTGAGATTAATGGAGTTGTATGTGATTTCGTGGCGGGGGATGAGACTCATAAGGATGTGAGTTTAATTTATGAGATGCTTGGTAACATAACCAGCCAAGCCCGGATGGAAAGCTGCAAATCAGAGACAATATCAGAGGCATTGGTTGGTGTCTAAGAGATGCAGTTGGAGAACTGAGAAGAAAGACTTCTGGTAAGATTGCTATTTTGCTATTGCAACATACTAGTTGAAACTGAATGTAGTGTTCATTTTAGCCTTATAGTTCTCTCAATCTCATTCTTAACTCTTCTGGAGAAACTATGCAAATATACATGAATTAATGCTAATTCGAGGTATGCTGATTCTTTTTTTTCCTGACATATTACCTTATAGATGAGAGGGTGGAAATTCATACCCACGACCCATATTTCTTATCTATTTGTTTTAGCTTAAGTAATATTGTTGTTTCATTCCAGTTTATAGCAATTATTCTCTTACTCTTGTTGCTTAACGATTTTTTAGTTCTAAAATTTAAGCTTATAAAAACTATTCTATTCGTTGATGTAAATTTCTTTGTTTTGTTATGACTTTCTAACCAATATTTTAAAAAAATCGAACAAAATTCTGAAAACTTGATTAAGAATTCTAGTGTATCTTTAAGAAATGTAAAAACTAGAGAAAAATATTTTTGTGGGTTGGAGGGTTGGATTAGTTTTCATTTGGTCAGTAAATTTCAAAATGTTATATATTTAGTCTTTGAGTTTTGAGTTTAGTTTTAATTTAGCCCCTAAATTTTAAAATGTTACATTTTTACCGTAGAAATTTGAGATTTGTTTCAATTTGGTCCCTAAGTTTCAAAATTTACCCTTTTAATTTTGATTTTTTTTACTAAATACTCATTTGCCATCTTTAGCGATAATGTTTGTTAATTAAATTAAAATAACTAAAATAATTATCATTAATCAAAATTTATGAATTTTCATTACTATTAAAATTAAGTTTAAAATTTCACTTGATAATTACTTTAAATTAATTAATGAAACATTAATAGACATTAAAATATGGGGGATTAAGTTGGAACAAAACTCAAATCTCAAAGTAAAGTTACAACATTTCAAAGTTTAATTACTCAAACCAAAATTAAACCCAGAGGTGAGAGAAGTGTAATTTGATATAAAGTTAAAATTACCGTACCCAATCTCGAAAAGTTGTATACTTTTAAGAAAAGGAAGAAAAAGTGAAAAGAAAAAAGGGGACACGTGGGCAGTCCTGGCTGGACAGTGCTGGCATGCCACGTCACTTGACAACACTTGTGGTCCACCAATAGGAAAATTTAGAATATTAATGAAAACTGAAAAAGAATAATTTGGTGGGAGAAAATGGAAATGGGTCACATTTCATATGGTTCATTGGAGAAAGATCTGCAGGTGACGTGGCTTCTTCGCCATCTCTACATAACTATCCAAACCTCACCATTCCAATATCTCCTTTTGCACTTTTTTCCTATCTATTCTCTCTCTTTTGCTAGCGTGAGCTTCTTCTTTCATCAATCTCAACCCTCCATCACCCACCATTTTCGATCAAGCCCGTGCATTTTAGCTCACAAGCTGATCGAGCAAAGATATTTGTTTTTGCGAAAACAAGAAACGAACAAAAAAAAAAAAAAAACAGATCAAAATCAAAAAACAGAGGCAAACCAAAAGCTCCGTAGATAAAACCATTTACGGTGGCTAACTAAAAAGAAAAATCTTCTTTTCCCTTCGCTCGCGGCTCGCCGTAAACGCCACAGACCACCCATCCAGACGTGTGCTAAACTGCGCCTTCTTTGGTGAAGCAGTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTAATTGATTTCTGGTGGTCATGTTTGATCTTCGTCTCGCCGATCTTCCTGAAGTAGTTTACCCTTTGTGGAGAGTATAGCTTCTACAACTTAGCGGGATTAATTAACTGCTTCCTCAGTCTCATGAGCTTTTAACTGGGTTTTCTTTTTGGTTTGATTTTGATGTGGTTGGTGTTTATTGAGATGGGTGATCTTCTGATACGTGAATGAAGTCAGTGATCGAAACCCTAACCCTAATTTGGATTCTGTGGGAAGATTGACGAAACTGTGGATGGAATTTCTCTAGTATGTATCTAACCTTTTTGTGTGTTTCCTTTTCTCTTTTCTTTCTTTATTGGGCTATACTTGATTGCTTTGTATTTAGGAACGGAATCGCGTTTTGTTTAGGTTCTGGTTTAGCGGTTATGGATTGCAAGGAGCTCAATTTAAACGAAGATTGTGGTGGCTGTGGTAGCGGGGGAAAGAATGGGGGAGATGGGTTTATAGACAGGAGCAAAGTGAGGATTTTGCTGTGCGATAATGATTCAAAAAGTTCAGAAGAGGTTTTCAAGCTTCTTTTGAAATGTTCCTACCAGGGTACAAGTTTCTTTTCTTTTTTCTTCTTTGTTTTTCCCCCTTTAATAGAATCGTCCAGATGCTAAAAGTAATGCATTATAAGTAGTCATTTCAGCTACTGAAAATTCCTGAATGATTTTTGAGGTTTAAGACTTCGATTAGGTTACAATATCTAGAAGTTGCTCGTGGTACTATAAGATTGGGTTTAAATCTTAATTCTAAGATCTTCTGTTACAATGCGATTGTCATTACTGTCCTATTCTACAGGCGTCAATTATTTTATTCTATCACTGGTTTCTGAACTTTCTACATAATTAGCAATACTAACAATTGACAGAAATGTTAACTACTTTACTGATGCAAGGTTTTCTTTTTGTTGACAGTCATTTCCGTGAGTTCTGCTAGGCAGGTCATTGATGCTTTGAATGCGGAGGGACCTGAAATCGATATTATACTCTCGGAAGTTGATCTGCCAATGGCCAAAGGTATGAAAATGTTGAAGTATATCACCCGGGATAAAGAGCTCCGACGCATTCCTGTTATCAGTAAGTTCTGGTTTCTTAACTGCTAATTCATCACACTTAAATATCTCTAAATTAAGAGAATGATCTGATTCTCCTTTATTTGTTTTATTTTTTTCTTGCTTTATAAGTGATGTCAACACAAGATGAGGTCCCTATTGTCGTTAAGTGCTTGAGGCTTGGAGCAGCTGACTATCTTGTAAAGCCTTTACGGACAAATGAGCTATTAAACTTGTGGACGCACATGTGGAGAAGAAGACGCATGGTTTGCCTCCTTGAAATGAGTTTTTCCCCCTCATTTACATTGCTGTAGTAATTTTCTCAAATTGAATTTGGTTGCACATCAGTTGCAAATAAACATGCAATCGAAGTGTCTAGGGAATTGTACCTTTGAACTTTGCAGATGATGTCTATCTTGGTTATTTATTACTTTCCAATTATCTCACTGGTTAACGCCTGGTGTTTGCTGACATCTTCCTTTTCATGTTTCTCACAATATCATCTCACCAGCCTTCTATCTGTTTTATGATGGCAGCTTGGACTGGCGGAAAAAAACATTTTGAATTATGAATTTGATATGGTGGCATCAGACCCAAGTGATGCTAATACGAATAGTACTACTTTGTTCTCGGATGACACTGATGACAAGTCACGTAGGAGCACAAATCCAGATATGGCAATTGCTGCGACCCATCAGGAAGATGAGGTTTGTACAATATGATTTTTGAAGTTTTTTCCTTTTCTTTTTTTTTTTTCTCTCCTTTTTTTTTCTTTTTTTTTTCTTTTTCTTTTTCTTTTGGTAAGAATATGACTTTTTAAGTTATGAAATGATAATGCAATATTAAGTACTATATTAGCACAGACACTTTAGTTTGGGTAGCTTGTCTATATCCGACACGTGGACACTCCAATGCTTGTTGGACACATATCAGACACTTGGGTAGTGTAAAAAATATGTTAGACATACATAGAAAACTTGTTAAGTAGACTAAAAAGACACATGACAATAATAATAAATTTTGAGTGTGAGATACATCAATGATCAAACTAATTTTCAAAGCATATAAATAGATCAGCCCATTTACTTTTAATTTTCTTTTGGTAAAAAAATAGAATATATTTTTTAGAATTTATATTTTAATAAATGTGTTCTTGTTGTGTCATATTTTGTCCTAGACTTTTTAAAAATGATGCGTCGTTGTGATTGTTCCGTGTCGTATTCGTGTCTCGTATACTTATTTATGCTTCTTAGATCTTGACCATTAGGTTCCTTTTTGTCCTAACCCTAGAAATAAAAAATGTAAAATTGGGATGTTTTGTGCATTAAATTTCTCTCTTATCTATAGCTAACTGTTACACAGGTAGATTGTTTAGGCTTCTTTTCTTTAGGGGGGAAGAGATGCTGTTTAAGGCGAAATAAGTATTGTATGTTGACTACAGTTCTGGATATATAGGAAGTTAATTGTTAAATAAGCGATACTATTTTGATATTCATTTATTTTTTCTTTTTACTTATGAAAACCAACTTTCATTTAGTAGATTGTGTATCACTTAGAAAGTTATGCTTTCTTTTTCTGCACCAACTTCACTGTAGCAATTCTCAGGAACTCCTTCTGCACCTTAATTCTACTTTGATATCAATGGTTTTCATTTATTAACTTTCTATCTGGATGTTCAAACCAAGACCTCTACAACTTCTCCCAAGCACCCTGTCCTTACCACCATCAGACTGCTCCTTGGAGGGTGACTTAGACGTTTGTAAAATGTAATTAATGTTTAATATAATACAAAGTAAAATATGATTTATAAATGAAATCTTATGTTTTATGACCTTGGCTTGGCCTTTGTACAGTTGGTTGGTCGTTTTTAATCGTGATTAAACATGTCCTAGAACTCAAGGATACAAAGATGACACAGTTGTACAACCTATATTTTGGTTAAACATATCAAAATAAAGGTTCAGATTGCAAGTTATCTTGATTGTTGAGATGTATATGAACTTAATGATGAATTCCCTCAAGGATTGTGAAGGAGGGTGACATGGAAATCCTTCTTTTATTTATTCATTATTTTATCGACACCATCTATATTATACCCTCAACTATGAACTTAATTTCAATTGTGTTGACTTATATTTTTCAGTCTGGTATTGCCGCCGCACTTGTAGAGCCTCCTGCTGTTCATACAGTGAAACATCAGCCAGATGTACCTGGAATCAGTGAGCGTCGAACAGGTAAGCCAGTGATCAAATTGACCTGTTCTTTCATAAGCACAATGTTTAAAATAGTCCAAGAAGTTTCTATTGGAAGCAAGCAAATATCCTGTCACTGCTGCTAGTAGAAACATATGTGATAAATGCAGTAATATGGCTTTACCTTGTGTAATAATTAATTGATTCTCAGTTAACTTTTTGTTCCTTCCACCTTTTTTCAATGTGTAATATAATTATATTTTGCAACCTCTTGCAGGGCAACCTTCATCATGTCCTAGAAAGAGTGAACTAAAGATTGGGGAATCATCCGCATTCTTTACCTATGTCAAATCAAGAGCTGTGAAAAATAAGGCAGTAGATGTTGAAGATAATGCTAAACGACTTTTGCTGGACGAAAATCATCAAGAAACTAGTCATCGTGCAGCTCATCTTCCCCCAATACAAGAAAATGGGGAGGCCTTGGAAAGCCATTCCCAAGGAGACGAATTCCCAAGCAGTAGTTTTCCTGATTCTTTTTCTGTGGAGAGATCTTGTACACCACCTGCTGGCACAGAAGTTCACAGGGAAAGAAACATCAATGAAGAAAATTGCTCTCAAGCCCTTGTGCATCCTCGAGATGGATCTCAGGTTGATATGTCAGGCCTACCTGTGCAAACACAAACTGCTTATCCTTTTTATATGCCGGAAGGTATGATGTCGGCGCAACTGTACCAAAAAAACCTGCATGATATGCAAAATCATGCGGCAATGATGTCACAGTATGGACATTTTCATCATTGCCCTCCCAATGTAAGTGGGGTGGCGTCTTATCCTTATTACCCTATGAATATATGTTTACAACCTGGTCAAATGCCAACTAGCACTACTCATATTCATTCATGGCCATCTTTTGGGAATTCATCTTCCAATGAAGCAAAATCGAACAAATTTGATAGAAGAGAGGCAGCACTGATTAAATTTAGGCAGAAAAGGAAAGAACGCTGTTTTGATAAGAAGATTAGGTATGTTAATAGGAAACGGCTTGCAGAGAGGAGGCCTCGTGTTCGGGGTCAGTTTGTGAGAAAGGTAAATGGTGTCAATGTAGATCTTAATGGACAACCTGCATCTGTTGATGATGTCGAGGATGAAGACGAGGAGGAGGAACTACTATCAAGGGATTCCTCTCATGAGGATGATGGTTCAGGATATTAG

mRNA sequence

ATGCAAGTTAACCAAACCGCCATTCCCGCCATTGGAAGTAGCTCCAGAGTTAGGCAACAATTTCTTTTCTCTGTATTAAAGTGCTGTCTATCTGTTCGTAATCTTGCGAAAATCCATGCTCAAATAGTCGTCAGCGGCTTTGCCCAGAAAAATTACATCCTTGTCAATCTTTTGTCGCTCTATATCTCTTTTGGTTCTCTTGGAAGTGCCCAGAAAGTTTTCGAGGATATTAGGACACCGAGTACGACTGTGTGGAACCAGATAATTAGAGGCCATGCGCGGAGCAAAACGCCACAAGAATCGATTGAGCTGTTCAAACGAATGACAGTGGCGGAAGTTGAGGCTGATGGGTTCACGTATTCGTTTCTTCTGAGTGCGTGTGTGAGATCGAGGTTATTCAGAGAGGGGGAACAGATTCATGGGAGAGTTTTAGCAAATGGGTATTGGTCCAACTTGTATGTTAGAACGAATTTGATCAATTTATACGCAAATGGTGGAGGTCGAGGGGATTTTGATCTTAAGCGTGCGCGTTACATGTTTGATGAAATGCCTGACTCAAATGTCGTGGGTTGGAATTCCTTGCTCGCAGGGTATGTTAGACGTGGTGATTTTGATGGGGCTAGAAAAGTTTTTGACGAGATGCCTGAAAGGAATGTCCAGACATGGACTACAATGGTTGCAGGGCTTGCTCAAAATGGCCATTGTAAGCTAGCTTTGTCACTATTTAATCAAATGAGAAGGGCTGGTGTGGAATTGGATCAAGTGGCGTTGGTGGCTGCATTGTCAGCTTGTGCTGAATTGGGAGACTTGACATTGGGAAAATGGATTCATAGGTATGTTGAAAGAACATGGCGGAGTAGACACTTCCCTGTCTTGGTGTCTCTGAACAATGCTCTGATGCATATGTATGCAAGTTGTGGTGTTATGGATTTAGCATATAAAGTGTTTGAAGAAATGCCCCAACGAAACACCGTGTCTTGGTCAAGCATTATCACTGGGTTTGCGAAACAGGGTTGTGGAGAAGAAGCCATTAGAGTCTTTCAGTTGATGCTGTGCTCTGGCCAAAATGAAGTTAGACCTGACGAGATAACCTTCATCGGAGTTCTCACTGCTTGTAGTCATGCCGGTTTGATCATCGACGGCATCCGAGTTTTCCAGTCTATGCACAAAACTTTCGGAGTCATCCCGCAGATTGAGCATTATGGATGCATGGTTGATCTCTTAAGCCGTGCAGGTTTACTGAGTGAAGCGTTGAGGCTGATTGAAAGTATGCCAATGAAGCCAAATAATGCTGTGTGGGGAGCACTTCTCAGCGGCTGTAGAATTCACAAGAACGACGAGATCGCATCCCATGTTGCGAAACAATTGGCTTTCGAAATCGATCCCAGCAAACAGGCTGCTGGATACTTCATGCTCCTAGCTAATGTTTATGCTGCAGACAAACGTTGGCGAGACACTGCCATTGTGAGACAGAACATGCTCGACATAGGAGTGAAGAAACCTTCAGGAAGAAGTTGGATTGAGATTAATGGAGTTGTATGTGATTTCGTGGCGGGGGATGAGACTCATAAGGATGTGAGTTTAATTTATGAGATGCTTGGTAACATAACCAGCCAAGCCCGGATGGAAAGCTGCAAATCAGAGACAATATCAGAGGCATTGGTTGGTTCTGGTTTAGCGGTTATGGATTGCAAGGAGCTCAATTTAAACGAAGATTGTGGTGGCTGTGGTAGCGGGGGAAAGAATGGGGGAGATGGGTTTATAGACAGGAGCAAAGTGAGGATTTTGCTGTGCGATAATGATTCAAAAAGTTCAGAAGAGGTTTTCAAGCTTCTTTTGAAATGTTCCTACCAGGTCATTTCCGTGAGTTCTGCTAGGCAGGTCATTGATGCTTTGAATGCGGAGGGACCTGAAATCGATATTATACTCTCGGAAGTTGATCTGCCAATGGCCAAAGGTATGAAAATGTTGAAGTATATCACCCGGGATAAAGAGCTCCGACGCATTCCTGTTATCATGATGTCAACACAAGATGAGGTCCCTATTGTCGTTAAGTGCTTGAGGCTTGGAGCAGCTGACTATCTTGTAAAGCCTTTACGGACAAATGAGCTATTAAACTTGTGGACGCACATGTGGAGAAGAAGACGCATGCTTGGACTGGCGGAAAAAAACATTTTGAATTATGAATTTGATATGGTGGCATCAGACCCAAGTGATGCTAATACGAATAGTACTACTTTGTTCTCGGATGACACTGATGACAAGTCACGTAGGAGCACAAATCCAGATATGGCAATTGCTGCGACCCATCAGGAAGATGAGTCTGGTATTGCCGCCGCACTTGTAGAGCCTCCTGCTGTTCATACAGTGAAACATCAGCCAGATGTACCTGGAATCAGTGAGCGTCGAACAGGGCAACCTTCATCATGTCCTAGAAAGAGTGAACTAAAGATTGGGGAATCATCCGCATTCTTTACCTATGTCAAATCAAGAGCTGTGAAAAATAAGGCAGTAGATGTTGAAGATAATGCTAAACGACTTTTGCTGGACGAAAATCATCAAGAAACTAGTCATCGTGCAGCTCATCTTCCCCCAATACAAGAAAATGGGGAGGCCTTGGAAAGCCATTCCCAAGGAGACGAATTCCCAAGCAGTAGTTTTCCTGATTCTTTTTCTGTGGAGAGATCTTGTACACCACCTGCTGGCACAGAAGTTCACAGGGAAAGAAACATCAATGAAGAAAATTGCTCTCAAGCCCTTGTGCATCCTCGAGATGGATCTCAGGTTGATATGTCAGGCCTACCTGTGCAAACACAAACTGCTTATCCTTTTTATATGCCGGAAGGTATGATGTCGGCGCAACTGTACCAAAAAAACCTGCATGATATGCAAAATCATGCGGCAATGATGTCACAGTATGGACATTTTCATCATTGCCCTCCCAATGTAAGTGGGGTGGCGTCTTATCCTTATTACCCTATGAATATATGTTTACAACCTGGTCAAATGCCAACTAGCACTACTCATATTCATTCATGGCCATCTTTTGGGAATTCATCTTCCAATGAAGCAAAATCGAACAAATTTGATAGAAGAGAGGCAGCACTGATTAAATTTAGGCAGAAAAGGAAAGAACGCTGTTTTGATAAGAAGATTAGGTATGTTAATAGGAAACGGCTTGCAGAGAGGAGGCCTCGTGTTCGGGGTCAGTTTGTGAGAAAGGTAAATGGTGTCAATGTAGATCTTAATGGACAACCTGCATCTGTTGATGATGTCGAGGATGAAGACGAGGAGGAGGAACTACTATCAAGGGATTCCTCTCATGAGGATGATGGTTCAGGATATTAG

Coding sequence (CDS)

ATGCAAGTTAACCAAACCGCCATTCCCGCCATTGGAAGTAGCTCCAGAGTTAGGCAACAATTTCTTTTCTCTGTATTAAAGTGCTGTCTATCTGTTCGTAATCTTGCGAAAATCCATGCTCAAATAGTCGTCAGCGGCTTTGCCCAGAAAAATTACATCCTTGTCAATCTTTTGTCGCTCTATATCTCTTTTGGTTCTCTTGGAAGTGCCCAGAAAGTTTTCGAGGATATTAGGACACCGAGTACGACTGTGTGGAACCAGATAATTAGAGGCCATGCGCGGAGCAAAACGCCACAAGAATCGATTGAGCTGTTCAAACGAATGACAGTGGCGGAAGTTGAGGCTGATGGGTTCACGTATTCGTTTCTTCTGAGTGCGTGTGTGAGATCGAGGTTATTCAGAGAGGGGGAACAGATTCATGGGAGAGTTTTAGCAAATGGGTATTGGTCCAACTTGTATGTTAGAACGAATTTGATCAATTTATACGCAAATGGTGGAGGTCGAGGGGATTTTGATCTTAAGCGTGCGCGTTACATGTTTGATGAAATGCCTGACTCAAATGTCGTGGGTTGGAATTCCTTGCTCGCAGGGTATGTTAGACGTGGTGATTTTGATGGGGCTAGAAAAGTTTTTGACGAGATGCCTGAAAGGAATGTCCAGACATGGACTACAATGGTTGCAGGGCTTGCTCAAAATGGCCATTGTAAGCTAGCTTTGTCACTATTTAATCAAATGAGAAGGGCTGGTGTGGAATTGGATCAAGTGGCGTTGGTGGCTGCATTGTCAGCTTGTGCTGAATTGGGAGACTTGACATTGGGAAAATGGATTCATAGGTATGTTGAAAGAACATGGCGGAGTAGACACTTCCCTGTCTTGGTGTCTCTGAACAATGCTCTGATGCATATGTATGCAAGTTGTGGTGTTATGGATTTAGCATATAAAGTGTTTGAAGAAATGCCCCAACGAAACACCGTGTCTTGGTCAAGCATTATCACTGGGTTTGCGAAACAGGGTTGTGGAGAAGAAGCCATTAGAGTCTTTCAGTTGATGCTGTGCTCTGGCCAAAATGAAGTTAGACCTGACGAGATAACCTTCATCGGAGTTCTCACTGCTTGTAGTCATGCCGGTTTGATCATCGACGGCATCCGAGTTTTCCAGTCTATGCACAAAACTTTCGGAGTCATCCCGCAGATTGAGCATTATGGATGCATGGTTGATCTCTTAAGCCGTGCAGGTTTACTGAGTGAAGCGTTGAGGCTGATTGAAAGTATGCCAATGAAGCCAAATAATGCTGTGTGGGGAGCACTTCTCAGCGGCTGTAGAATTCACAAGAACGACGAGATCGCATCCCATGTTGCGAAACAATTGGCTTTCGAAATCGATCCCAGCAAACAGGCTGCTGGATACTTCATGCTCCTAGCTAATGTTTATGCTGCAGACAAACGTTGGCGAGACACTGCCATTGTGAGACAGAACATGCTCGACATAGGAGTGAAGAAACCTTCAGGAAGAAGTTGGATTGAGATTAATGGAGTTGTATGTGATTTCGTGGCGGGGGATGAGACTCATAAGGATGTGAGTTTAATTTATGAGATGCTTGGTAACATAACCAGCCAAGCCCGGATGGAAAGCTGCAAATCAGAGACAATATCAGAGGCATTGGTTGGTTCTGGTTTAGCGGTTATGGATTGCAAGGAGCTCAATTTAAACGAAGATTGTGGTGGCTGTGGTAGCGGGGGAAAGAATGGGGGAGATGGGTTTATAGACAGGAGCAAAGTGAGGATTTTGCTGTGCGATAATGATTCAAAAAGTTCAGAAGAGGTTTTCAAGCTTCTTTTGAAATGTTCCTACCAGGTCATTTCCGTGAGTTCTGCTAGGCAGGTCATTGATGCTTTGAATGCGGAGGGACCTGAAATCGATATTATACTCTCGGAAGTTGATCTGCCAATGGCCAAAGGTATGAAAATGTTGAAGTATATCACCCGGGATAAAGAGCTCCGACGCATTCCTGTTATCATGATGTCAACACAAGATGAGGTCCCTATTGTCGTTAAGTGCTTGAGGCTTGGAGCAGCTGACTATCTTGTAAAGCCTTTACGGACAAATGAGCTATTAAACTTGTGGACGCACATGTGGAGAAGAAGACGCATGCTTGGACTGGCGGAAAAAAACATTTTGAATTATGAATTTGATATGGTGGCATCAGACCCAAGTGATGCTAATACGAATAGTACTACTTTGTTCTCGGATGACACTGATGACAAGTCACGTAGGAGCACAAATCCAGATATGGCAATTGCTGCGACCCATCAGGAAGATGAGTCTGGTATTGCCGCCGCACTTGTAGAGCCTCCTGCTGTTCATACAGTGAAACATCAGCCAGATGTACCTGGAATCAGTGAGCGTCGAACAGGGCAACCTTCATCATGTCCTAGAAAGAGTGAACTAAAGATTGGGGAATCATCCGCATTCTTTACCTATGTCAAATCAAGAGCTGTGAAAAATAAGGCAGTAGATGTTGAAGATAATGCTAAACGACTTTTGCTGGACGAAAATCATCAAGAAACTAGTCATCGTGCAGCTCATCTTCCCCCAATACAAGAAAATGGGGAGGCCTTGGAAAGCCATTCCCAAGGAGACGAATTCCCAAGCAGTAGTTTTCCTGATTCTTTTTCTGTGGAGAGATCTTGTACACCACCTGCTGGCACAGAAGTTCACAGGGAAAGAAACATCAATGAAGAAAATTGCTCTCAAGCCCTTGTGCATCCTCGAGATGGATCTCAGGTTGATATGTCAGGCCTACCTGTGCAAACACAAACTGCTTATCCTTTTTATATGCCGGAAGGTATGATGTCGGCGCAACTGTACCAAAAAAACCTGCATGATATGCAAAATCATGCGGCAATGATGTCACAGTATGGACATTTTCATCATTGCCCTCCCAATGTAAGTGGGGTGGCGTCTTATCCTTATTACCCTATGAATATATGTTTACAACCTGGTCAAATGCCAACTAGCACTACTCATATTCATTCATGGCCATCTTTTGGGAATTCATCTTCCAATGAAGCAAAATCGAACAAATTTGATAGAAGAGAGGCAGCACTGATTAAATTTAGGCAGAAAAGGAAAGAACGCTGTTTTGATAAGAAGATTAGGTATGTTAATAGGAAACGGCTTGCAGAGAGGAGGCCTCGTGTTCGGGGTCAGTTTGTGAGAAAGGTAAATGGTGTCAATGTAGATCTTAATGGACAACCTGCATCTGTTGATGATGTCGAGGATGAAGACGAGGAGGAGGAACTACTATCAAGGGATTCCTCTCATGAGGATGATGGTTCAGGATATTAG

Protein sequence

MQVNQTAIPAIGSSSRVRQQFLFSVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGSLGSAQKVFEDIRTPSTTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAGLIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGALLSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDIGVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQARMESCKSETISEALVGSGLAVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDANTNSTTLFSDDTDDKSRRSTNPDMAIAATHQEDESGIAAALVEPPAVHTVKHQPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENHQETSHRAAHLPPIQENGEALESHSQGDEFPSSSFPDSFSVERSCTPPAGTEVHRERNINEENCSQALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDVEDEDEEEELLSRDSSHEDDGSGY
Homology
[Close]
BLAST of Clc04G12540 vs. NCBI nr
Match: XP_038895403.1 (pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida])

HSP 1 Score: 1051.2 bits (2717), Expect = 6.3e-303
Identity = 514/556 (92.45%), Postives = 534/556 (96.04%), Query Frame = 0 

Query: 1   MQVNQTAIPAIGSSSRVRQQFLFSVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSL 60
           M+VN+TAI AIG SSRV QQF+FSVLKCC+SVRNLAKIHAQI+VSGFAQKNYILVNLLSL
Sbjct: 1   MEVNKTAISAIGRSSRVGQQFIFSVLKCCISVRNLAKIHAQILVSGFAQKNYILVNLLSL 60

Query: 61  YISFGSLGSAQKVFEDIRTPSTTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTY 120
           YISFGSLG+AQKVFED   PSTTVWNQIIRGHARSKTPQESI+LFKRMT AEVEADGFTY
Sbjct: 61  YISFGSLGTAQKVFEDTSAPSTTVWNQIIRGHARSKTPQESIQLFKRMTAAEVEADGFTY 120

Query: 121 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGGRGDFDLKRARYMF 180
           SFLLSACVRSRLFREGEQIHGRVL NGYWSN YVRTNLINLYANGGG GDFDLKRARYMF
Sbjct: 121 SFLLSACVRSRLFREGEQIHGRVLVNGYWSNTYVRTNLINLYANGGGVGDFDLKRARYMF 180

Query: 181 DEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALS 240
           DEMPD+NVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAG AQNG CKLALS
Sbjct: 181 DEMPDANVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGFAQNGQCKLALS 240

Query: 241 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALM 300
           LFNQMRRAG+ELDQVALVAALSACAELG+LTLGKWIHRYVERTWRSRH PVLVSLNN+LM
Sbjct: 241 LFNQMRRAGMELDQVALVAALSACAELGNLTLGKWIHRYVERTWRSRHLPVLVSLNNSLM 300

Query: 301 HMYASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRP 360
           HMYASCGVMDLAYKVF+EM +RNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRP
Sbjct: 301 HMYASCGVMDLAYKVFKEMSRRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRP 360

Query: 361 DEITFIGVLTACSHAGLIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRL 420
           DEITF+GVLTACSHAGLI DGIR+FQSMHK F VIPQIEHYGCMVDLLSRAGLL+EAL+L
Sbjct: 361 DEITFVGVLTACSHAGLIDDGIRLFQSMHKIFEVIPQIEHYGCMVDLLSRAGLLNEALKL 420

Query: 421 IESMPMKPNNAVWGALLSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAAD 480
           IESMPMKPNN VWGALL+GCRIHKND+IASHVAKQLA EIDP  QAAGYFMLLANVYAAD
Sbjct: 421 IESMPMKPNNVVWGALLNGCRIHKNDKIASHVAKQLALEIDPCNQAAGYFMLLANVYAAD 480

Query: 481 KRWRDTAIVRQNMLDIGVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQA 540
           KRWRDTAIVRQNMLDIGVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNIT QA
Sbjct: 481 KRWRDTAIVRQNMLDIGVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITRQA 540

Query: 541 RMESCKSETISEALVG 557
           RMESCKSETISEA+VG
Sbjct: 541 RMESCKSETISEAIVG 556

[Close]
BLAST of Clc04G12540 vs. NCBI nr
Match: XP_038894062.1 (two-component response regulator-like APRR1 [Benincasa hispida])

HSP 1 Score: 1047.0 bits (2706), Expect = 1.2e-301
Identity = 533/554 (96.21%), Postives = 541/554 (97.65%), Query Frame = 0 

Query: 562  MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 621
            MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS
Sbjct: 1    MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 60

Query: 622  VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 681
            VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP
Sbjct: 61   VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 120

Query: 682  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 741
            IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN
Sbjct: 121  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 180

Query: 742  TNSTTLFSDDTDDKSRRSTNPDMAIAATHQEDESGIAAALVEPPAVHTVKHQPDVPGISE 801
            TNSTTLFSDDTDDKSRRSTNPD+ IAA HQEDESGIAAALVEPPAVHT+KHQPDVPGISE
Sbjct: 181  TNSTTLFSDDTDDKSRRSTNPDVGIAAAHQEDESGIAAALVEPPAVHTMKHQPDVPGISE 240

Query: 802  RRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENHQETSHRAA 861
            RRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVDVEDNAKRLLLDENHQETS RAA
Sbjct: 241  RRTGQPSSCPRKSELKIGESSAFFTYVKSRNVKNKAVDVEDNAKRLLLDENHQETSQRAA 300

Query: 862  HLPPIQENGEALESHSQGDEFPSSSFPDSFSVERSCTPPAGTEVHRERNINEENCSQALV 921
             LPPIQE+GE LESHSQGDEFPSSSFPDSFSVERSCTPPA TEV RERNINEENCSQ LV
Sbjct: 301  RLPPIQESGETLESHSQGDEFPSSSFPDSFSVERSCTPPASTEVQRERNINEENCSQVLV 360

Query: 922  HPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHHCPP 981
            HPR+GSQ+D+SGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHHCPP
Sbjct: 361  HPRNGSQLDISGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHHCPP 420

Query: 982  NVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRREAALIKFRQ 1041
            NVSGVASYPYYPMNICLQPGQMP +TT+ HSWPS GNSSSNEAKSNKFDRREAALIKFRQ
Sbjct: 421  NVSGVASYPYYPMNICLQPGQMPATTTNTHSWPSLGNSSSNEAKSNKFDRREAALIKFRQ 480

Query: 1042 KRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDVEDEDEEEEL 1101
            KRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS DDVEDEDEEEEL
Sbjct: 481  KRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDVEDEDEEEEL 540

Query: 1102 LSRDSSHEDDGSGY 1116
            LSRDSSHEDDGSGY
Sbjct: 541  LSRDSSHEDDGSGY 554

[Close]
BLAST of Clc04G12540 vs. NCBI nr
Match: TYJ98908.1 (two-component response regulator-like APRR1 [Cucumis melo var. makuwa])

HSP 1 Score: 1023.1 bits (2644), Expect = 1.8e-294
Identity = 528/563 (93.78%), Postives = 539/563 (95.74%), Query Frame = 0 

Query: 556  GSGLAVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKC 615
            GSGL VMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKC
Sbjct: 48   GSGLPVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKC 107

Query: 616  SYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMS 675
            SYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMS
Sbjct: 108  SYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMS 167

Query: 676  TQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVAS 735
            TQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVAS
Sbjct: 168  TQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVAS 227

Query: 736  DPSDANTNSTTLFSDDTDDKSRRSTNPDMAIA--ATHQEDESGIAAALVEPPAVHTVKHQ 795
            DPSDANTNSTTLFSDDTDDKSRRSTNPDM I   ATHQEDE GIA  LVEPPAVH+V+HQ
Sbjct: 228  DPSDANTNSTTLFSDDTDDKSRRSTNPDMGITAPATHQEDEPGIAPTLVEPPAVHSVQHQ 287

Query: 796  PDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENH 855
            PDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVD+EDNAKRLLLDEN+
Sbjct: 288  PDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRTVKNKAVDIEDNAKRLLLDENY 347

Query: 856  QETSHRAAHLPPIQENGEALESHSQGDEFPSS-SFPDSFSVERSCTPPAGTEVHRERNIN 915
            QETS RA  LPPIQE GEALESHSQGDE PSS SFPDSFSVERSCTPPA TEVHRERNIN
Sbjct: 348  QETSQRAVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAVTEVHRERNIN 407

Query: 916  EENCSQALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQ 975
            EENCSQ LVH R+GSQ+D+SGLPVQTQTAYPFYMPEGMMSAQ+YQ NLHDMQNHAAMMSQ
Sbjct: 408  EENCSQVLVHTRNGSQLDISGLPVQTQTAYPFYMPEGMMSAQMYQNNLHDMQNHAAMMSQ 467

Query: 976  YGHFHHCPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRR 1035
            YGHFHHCPPNV+GVASYPYYPMNICLQPGQMPT TT+ HSWPS GNSSSNEAKSNK DRR
Sbjct: 468  YGHFHHCPPNVNGVASYPYYPMNICLQPGQMPT-TTNTHSWPSLGNSSSNEAKSNKLDRR 527

Query: 1036 EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDV 1095
            EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS DDV
Sbjct: 528  EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDV 587

Query: 1096 EDEDEEEELLSRDSSHEDDGSGY 1116
            EDEDE+EELLSRDSSHEDDGSGY
Sbjct: 588  EDEDEDEELLSRDSSHEDDGSGY 609

[Close]
BLAST of Clc04G12540 vs. NCBI nr
Match: KAE8652513.1 (hypothetical protein Csa_013415 [Cucumis sativus])

HSP 1 Score: 1017.7 bits (2630), Expect = 7.7e-293
Identity = 525/565 (92.92%), Postives = 541/565 (95.75%), Query Frame = 0 

Query: 555  VGSGLAVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLK 614
            VGSGL VMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLK
Sbjct: 23   VGSGLPVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLK 82

Query: 615  CSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMM 674
            CSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMM
Sbjct: 83   CSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMM 142

Query: 675  STQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVA 734
            STQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR LGLAEKNILNYEFD+VA
Sbjct: 143  STQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYEFDLVA 202

Query: 735  SDPSDANTNSTTLFSDDTDDKSRRSTNPDMAIA--ATHQEDESGIAAALVEPPAVHTVKH 794
            SDPSDANTNSTTLFSDDTDDKSRRSTNP+M I   ATHQEDE GIAA +VEPPAVH+V+H
Sbjct: 203  SDPSDANTNSTTLFSDDTDDKSRRSTNPEMGITAPATHQEDEPGIAATIVEPPAVHSVQH 262

Query: 795  QPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDEN 854
            QPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVD+ED+ KRLLL+EN
Sbjct: 263  QPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRTVKNKAVDIEDSTKRLLLEEN 322

Query: 855  HQETSHRAAHLPPIQENGEALESHSQGDEFPSS-SFPDSFSVERSCTPPAGTEVHRERNI 914
            HQETS RA  LPPIQE GEALESHSQGDE PSS SFPDSFSVERSCTPPAGT+VHRERNI
Sbjct: 323  HQETSQRAVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAGTDVHRERNI 382

Query: 915  NEENCSQALVHPRDGSQVDMSGLPVQTQT-AYPFYMPEGMMSAQLYQKNLHDMQNHAAMM 974
            NEENCSQ L+H R+GSQ+D+SGLPVQTQT AYPFYMPEGMMSAQ+YQ NLH+MQNHAAMM
Sbjct: 383  NEENCSQVLLHSRNGSQLDISGLPVQTQTAAYPFYMPEGMMSAQIYQNNLHEMQNHAAMM 442

Query: 975  SQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFD 1034
            SQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPT TT+ HSWPS GNSSSNEAKSNKFD
Sbjct: 443  SQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPT-TTNTHSWPSLGNSSSNEAKSNKFD 502

Query: 1035 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVD 1094
            RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS D
Sbjct: 503  RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASAD 562

Query: 1095 DVEDEDEEEELLSRDSSHEDDGSGY 1116
            DVEDEDEEEELLSRDSSHEDDGSGY
Sbjct: 563  DVEDEDEEEELLSRDSSHEDDGSGY 586

[Close]
BLAST of Clc04G12540 vs. NCBI nr
Match: XP_008444691.1 (PREDICTED: two-component response regulator-like APRR1 [Cucumis melo] >XP_008444766.1 PREDICTED: two-component response regulator-like APRR1 [Cucumis melo] >XP_016899442.1 PREDICTED: two-component response regulator-like APRR1 [Cucumis melo])

HSP 1 Score: 1014.2 bits (2621), Expect = 8.5e-292
Identity = 523/557 (93.90%), Postives = 534/557 (95.87%), Query Frame = 0 

Query: 562  MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 621
            MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS
Sbjct: 1    MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 60

Query: 622  VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 681
            VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP
Sbjct: 61   VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 120

Query: 682  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 741
            IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN
Sbjct: 121  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 180

Query: 742  TNSTTLFSDDTDDKSRRSTNPDMAIA--ATHQEDESGIAAALVEPPAVHTVKHQPDVPGI 801
            TNSTTLFSDDTDDKSRRSTNPDM I   ATHQEDE GIA  LVEPPAVH+V+HQPDVPGI
Sbjct: 181  TNSTTLFSDDTDDKSRRSTNPDMGITAPATHQEDEPGIAPTLVEPPAVHSVQHQPDVPGI 240

Query: 802  SERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENHQETSHR 861
            SERRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVD+EDNAKRLLLDEN+QETS R
Sbjct: 241  SERRTGQPSSCPRKSELKIGESSAFFTYVKSRTVKNKAVDIEDNAKRLLLDENYQETSQR 300

Query: 862  AAHLPPIQENGEALESHSQGDEFPSS-SFPDSFSVERSCTPPAGTEVHRERNINEENCSQ 921
            A  LPPIQE GEALESHSQGDE PSS SFPDSFSVERSCTPPA TEVHRERNINEENCSQ
Sbjct: 301  AVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAVTEVHRERNINEENCSQ 360

Query: 922  ALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHH 981
             LVH R+GSQ+D+SGLPVQTQTAYPFYMPEGMMSAQ+YQ NLHDMQNHAAMMSQYGHFHH
Sbjct: 361  VLVHTRNGSQLDISGLPVQTQTAYPFYMPEGMMSAQMYQNNLHDMQNHAAMMSQYGHFHH 420

Query: 982  CPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRREAALIK 1041
            CPPNV+GVASYPYYPMNICLQPGQMPT TT+ HSWPS GNSSSNEAKSNK DRREAALIK
Sbjct: 421  CPPNVNGVASYPYYPMNICLQPGQMPT-TTNTHSWPSLGNSSSNEAKSNKLDRREAALIK 480

Query: 1042 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDVEDEDEE 1101
            FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS DDVEDEDE+
Sbjct: 481  FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDVEDEDED 540

Query: 1102 EELLSRDSSHEDDGSGY 1116
            EELLSRDSSHEDDGSGY
Sbjct: 541  EELLSRDSSHEDDGSGY 556

[Close]
BLAST of Clc04G12540 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 9.2e-140
Identity = 331/640 (51.72%), Postives = 388/640 (60.62%), Query Frame = 0 

Query: 567  LNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSAR 626
            ++LN +C         GGDGFIDRS+VRILLCDNDS S  EVF LL +CSYQV +V SAR
Sbjct: 1    MDLNGEC--------KGGDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSAR 60

Query: 627  QVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKC 686
            QVIDALNAEGP+IDIIL+E+DLPMAKGMKML+YITRDK+LRRIPVIMMS QDEVP+VVKC
Sbjct: 61   QVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKC 120

Query: 687  LRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDANTNSTT 746
            L+LGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+L+Y+FD+V SD SD NTNST 
Sbjct: 121  LKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTN 180

Query: 747  LFSDDTDDKSRRSTNP------------DMAIAATHQED---------ESGIAAALVEPP 806
            LFSDDTDD+S RSTNP             +A A  H  D          S +A   +EPP
Sbjct: 181  LFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEPP 240

Query: 807  AVHTVKHQPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVD---VED 866
              H      + P        Q SS P+KS LKIGESSAFFTYVKS  ++    D   V+ 
Sbjct: 241  LDHLAGSHHE-PMKRNSNPAQFSSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDG 300

Query: 867  N--------------------------AKRL---------------LLDENHQETSHRAA 926
            N                          A+R                L++ N     HR A
Sbjct: 301  NGSLHLHRGLAEKFQVVASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGA 360

Query: 927  -------------HLPPIQENGEALESHSQGDEFPS-SSFPDSFSVERSCTPPAGTEVHR 986
                         +      +    + HSQG+   + +S+P   S+ERS T P   E H 
Sbjct: 361  AEKFQVVASEGINNTKQAHRSRGTEQYHSQGETLQNGASYP--HSLERSRTLPTSMESH- 420

Query: 987  ERNINEENCS---QALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQ 1046
             RN  E N +    A+   +D SQVD SG       AYP+YM  G+M+  + Q       
Sbjct: 421  GRNYQEGNMNIPQVAMNRSKDSSQVDGSGF--SAPNAYPYYM-HGVMNQVMMQS------ 480

Query: 1047 NHAAMMSQYGH-FHHCPPN-VSGVASYPYY--PMNICLQPGQMPTSTTHI----HSWPSF 1106
              AAMM QYGH   HC PN  +G+  YPYY  PMN  LQ  QM      +    HSW   
Sbjct: 481  --AAMMPQYGHQIPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHSWSPA 540

Query: 1107 GNSSSNEAKSNKFDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 1115
            GN  SNE + NK DRRE AL+KFR+KR +RCFDKKIRYVNRKRLAERRPRV+GQFVRK+N
Sbjct: 541  GNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMN 600

[Close]
BLAST of Clc04G12540 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 4.3e-105
Identity = 209/509 (41.06%), Postives = 302/509 (59.33%), Query Frame = 0 

Query: 24  SVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGS---LGSAQKVFEDIRTP 83
           S L+ C     L +IHA+++ +G  Q +Y +   LS  IS  S   L  AQ VF+    P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 84  STTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIH 143
            T +WN +IRG + S  P+ S+ L++RM  +    + +T+  LL AC     F E  QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 144 GRVLANGYWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVR 203
            ++   GY +++Y   +LIN YA  G     + K A  +FD +P+ + V WNS++ GYV+
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTG-----NFKLAHLLFDRIPEPDDVSWNSVIKGYVK 198

Query: 204 RGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVAA 263
            G  D A  +F +M E+N  +WTTM++G  Q    K AL LF++M+ + VE D V+L  A
Sbjct: 199 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 258

Query: 264 LSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVFEEMP 323
           LSACA+LG L  GKWIH Y+ +T R R   V   L   L+ MYA CG M+ A +VF+ + 
Sbjct: 259 LSACAQLGALEQGKWIHSYLNKT-RIRMDSV---LGCVLIDMYAKCGEMEEALEVFKNIK 318

Query: 324 QRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAGLIID 383
           +++  +W+++I+G+A  G G EAI  F  M   G   ++P+ ITF  VLTACS+ GL+ +
Sbjct: 319 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMG---IKPNVITFTAVLTACSYTGLVEE 378

Query: 384 GIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGALLSGC 443
           G  +F SM + + + P IEHYGC+VDLL RAGLL EA R I+ MP+KPN  +WGALL  C
Sbjct: 379 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 438

Query: 444 RIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDIGVKK 503
           RIHKN E+   +  ++   IDP     G ++  AN++A DK+W   A  R+ M + GV K
Sbjct: 439 RIHKNIELGEEIG-EILIAIDP--YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 498

Query: 504 PSGRSWIEINGVVCDFVAGDETHKDVSLI 530
             G S I + G   +F+AGD +H ++  I
Sbjct: 499 VPGCSTISLEGTTHEFLAGDRSHPEIEKI 512

[Close]
BLAST of Clc04G12540 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.0e-98
Identity = 206/589 (34.97%), Postives = 319/589 (54.16%), Query Frame = 0 

Query: 9   PAIGSSSRVRQQFLFSVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGSLG 68
           P+  SS R+ ++ L  + KC  ++  + ++HAQI+     +  +I   L+S         
Sbjct: 10  PSWVSSRRIFEERLQDLPKCA-NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTN 69

Query: 69  SAQKVFEDIRTPSTTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACV 128
            A +VF  ++ P+  + N +IR HA++  P ++  +F  M    + AD FTY FLL AC 
Sbjct: 70  LAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS 129

Query: 129 RSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGGRGDFD---------------- 188
                   + +H  +   G  S++YV   LI+ Y+  GG G  D                
Sbjct: 130 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 189

Query: 189 ------------LKRARYMFDEMPDSNVVGWNSLLAGYVR-------------------- 248
                       L+ AR +FDEMP  +++ WN++L GY R                    
Sbjct: 190 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 249

Query: 249 -----------RGDFDGARKVFDEM--PERNVQTWTTMVAGLAQNGHCKLALSLFNQMRR 308
                       GD + AR +FD+M  P +NV TWT ++AG A+ G  K A  L +QM  
Sbjct: 250 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 309

Query: 309 AGVELDQVALVAALSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCG 368
           +G++ D  A+++ L+AC E G L+LG  IH  ++R+    +  VL    NAL+ MYA CG
Sbjct: 310 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL----NALLDMYAKCG 369

Query: 369 VMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIG 428
            +  A+ VF ++P+++ VSW++++ G    G G+EAI +F  M   G   +RPD++TFI 
Sbjct: 370 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG---IRPDKVTFIA 429

Query: 429 VLTACSHAGLIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMK 488
           VL +C+HAGLI +GI  F SM K + ++PQ+EHYGC+VDLL R G L EA++++++MPM+
Sbjct: 430 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 489

Query: 489 PNNAVWGALLSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTA 537
           PN  +WGALL  CR+H   +IA  V   L  ++DP     G + LL+N+YAA + W   A
Sbjct: 490 PNVVIWGALLGACRMHNEVDIAKEVLDNLV-KLDPCD--PGNYSLLSNIYAAAEDWEGVA 549

[Close]
BLAST of Clc04G12540 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 5.7e-97
Identity = 201/514 (39.11%), Postives = 305/514 (59.34%), Query Frame = 0 

Query: 31  SVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGSLGSAQKVFEDIRTPSTTVWNQIIR 90
           +++ L + H  ++++G  + N  +   +    + G L  A  VF     P+T + N +IR
Sbjct: 27  NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86

Query: 91  GHARSKTPQE---SIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIHGRVLANG 150
             +    P     +I +++++     + D FT+ F+L   VR      G QIHG+V+  G
Sbjct: 87  ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146

Query: 151 YWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVRRGDFDGA 210
           + S+++V T LI +Y + GG GD     AR MFDEM   +V  WN+LLAGY + G+ D A
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGD-----ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 206

Query: 211 RKVFDEMP--ERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVAALSACA 270
           R + + MP   RN  +WT +++G A++G    A+ +F +M    VE D+V L+A LSACA
Sbjct: 207 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 266

Query: 271 ELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVFEEMPQRNTV 330
           +LG L LG+ I  YV+    +R     VSLNNA++ MYA  G +  A  VFE + +RN V
Sbjct: 267 DLGSLELGERICSYVDHRGMNR----AVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 326

Query: 331 SWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAGLIIDGIRVF 390
           +W++II G A  G G EA+ +F  M+ +G   VRP+++TFI +L+ACSH G +  G R+F
Sbjct: 327 TWTTIIAGLATHGHGAEALAMFNRMVKAG---VRPNDVTFIAILSACSHVGWVDLGKRLF 386

Query: 391 QSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGALLSGCRIHKN 450
            SM   +G+ P IEHYGCM+DLL RAG L EA  +I+SMP K N A+WG+LL+   +H +
Sbjct: 387 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 446

Query: 451 DEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDIGVKKPSGRS 510
            E+      +L  +++P+   +G +MLLAN+Y+   RW ++ ++R  M  IGVKK +G S
Sbjct: 447 LELGERALSEL-IKLEPNN--SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGES 506

Query: 511 WIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQ 540
            IE+   V  F++GD TH  V  I+E+L  +  Q
Sbjct: 507 SIEVENRVYKFISGDLTHPQVERIHEILQEMDLQ 525

[Close]
BLAST of Clc04G12540 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.7e-96
Identity = 194/532 (36.47%), Postives = 309/532 (58.08%), Query Frame = 0 

Query: 24  SVLKCCLSVRNLAK---IHAQIVVSGFAQKNYILVNLLSLYISFGSLGSAQKVFEDIRTP 83
           SVL  C  + ++ K   +H+ I  S F    YI   L+ +Y   G++  AQ+VF+++   
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216

Query: 84  STTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIH 143
           +   WN +I    ++    E++++F+ M  + VE D  T + ++SAC      + G+++H
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276

Query: 144 GRVLANGYWSNLYVRTN-LINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYV 203
           GRV+ N    N  + +N  +++YA         +K AR++FD MP  NV+   S+++GY 
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCS-----RIKEARFIFDSMPIRNVIAETSMISGYA 336

Query: 204 RRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVA 263
                  AR +F +M ERNV +W  ++AG  QNG  + ALSLF  ++R  V     +   
Sbjct: 337 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 396

Query: 264 ALSACAELGDLTLGKWIHRYVER---TWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVF 323
            L ACA+L +L LG   H +V +    ++S      + + N+L+ MY  CG ++  Y VF
Sbjct: 397 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD-IFVGNSLIDMYVKCGCVEEGYLVF 456

Query: 324 EEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAG 383
            +M +R+ VSW+++I GFA+ G G EA+ +F+ ML SG+   +PD IT IGVL+AC HAG
Sbjct: 457 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE---KPDHITMIGVLSACGHAG 516

Query: 384 LIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGAL 443
            + +G   F SM + FGV P  +HY CMVDLL RAG L EA  +IE MPM+P++ +WG+L
Sbjct: 517 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 576

Query: 444 LSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDI 503
           L+ C++H+N  +  +VA++L  E++PS   +G ++LL+N+YA   +W D   VR++M   
Sbjct: 577 LAACKVHRNITLGKYVAEKL-LEVEPSN--SGPYVLLSNMYAELGKWEDVMNVRKSMRKE 636

Query: 504 GVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQARMESCKSE 549
           GV K  G SWI+I G    F+  D++H     I+ +L  + ++ R E   +E
Sbjct: 637 GVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676

[Close]
BLAST of Clc04G12540 vs. ExPASy TrEMBL
Match: A0A5D3BL56 (Two-component response regulator-like APRR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001050 PE=3 SV=1)

HSP 1 Score: 1023.1 bits (2644), Expect = 8.9e-295
Identity = 528/563 (93.78%), Postives = 539/563 (95.74%), Query Frame = 0 

Query: 556  GSGLAVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKC 615
            GSGL VMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKC
Sbjct: 48   GSGLPVMDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKC 107

Query: 616  SYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMS 675
            SYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMS
Sbjct: 108  SYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMS 167

Query: 676  TQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVAS 735
            TQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVAS
Sbjct: 168  TQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVAS 227

Query: 736  DPSDANTNSTTLFSDDTDDKSRRSTNPDMAIA--ATHQEDESGIAAALVEPPAVHTVKHQ 795
            DPSDANTNSTTLFSDDTDDKSRRSTNPDM I   ATHQEDE GIA  LVEPPAVH+V+HQ
Sbjct: 228  DPSDANTNSTTLFSDDTDDKSRRSTNPDMGITAPATHQEDEPGIAPTLVEPPAVHSVQHQ 287

Query: 796  PDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENH 855
            PDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVD+EDNAKRLLLDEN+
Sbjct: 288  PDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRTVKNKAVDIEDNAKRLLLDENY 347

Query: 856  QETSHRAAHLPPIQENGEALESHSQGDEFPSS-SFPDSFSVERSCTPPAGTEVHRERNIN 915
            QETS RA  LPPIQE GEALESHSQGDE PSS SFPDSFSVERSCTPPA TEVHRERNIN
Sbjct: 348  QETSQRAVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAVTEVHRERNIN 407

Query: 916  EENCSQALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQ 975
            EENCSQ LVH R+GSQ+D+SGLPVQTQTAYPFYMPEGMMSAQ+YQ NLHDMQNHAAMMSQ
Sbjct: 408  EENCSQVLVHTRNGSQLDISGLPVQTQTAYPFYMPEGMMSAQMYQNNLHDMQNHAAMMSQ 467

Query: 976  YGHFHHCPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRR 1035
            YGHFHHCPPNV+GVASYPYYPMNICLQPGQMPT TT+ HSWPS GNSSSNEAKSNK DRR
Sbjct: 468  YGHFHHCPPNVNGVASYPYYPMNICLQPGQMPT-TTNTHSWPSLGNSSSNEAKSNKLDRR 527

Query: 1036 EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDV 1095
            EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS DDV
Sbjct: 528  EAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDV 587

Query: 1096 EDEDEEEELLSRDSSHEDDGSGY 1116
            EDEDE+EELLSRDSSHEDDGSGY
Sbjct: 588  EDEDEDEELLSRDSSHEDDGSGY 609

[Close]
BLAST of Clc04G12540 vs. ExPASy TrEMBL
Match: A0A1S3BBP2 (two-component response regulator-like APRR1 OS=Cucumis melo OX=3656 GN=LOC103487922 PE=3 SV=1)

HSP 1 Score: 1014.2 bits (2621), Expect = 4.1e-292
Identity = 523/557 (93.90%), Postives = 534/557 (95.87%), Query Frame = 0 

Query: 562  MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 621
            MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS
Sbjct: 1    MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 60

Query: 622  VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 681
            VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP
Sbjct: 61   VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 120

Query: 682  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 741
            IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN
Sbjct: 121  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 180

Query: 742  TNSTTLFSDDTDDKSRRSTNPDMAIA--ATHQEDESGIAAALVEPPAVHTVKHQPDVPGI 801
            TNSTTLFSDDTDDKSRRSTNPDM I   ATHQEDE GIA  LVEPPAVH+V+HQPDVPGI
Sbjct: 181  TNSTTLFSDDTDDKSRRSTNPDMGITAPATHQEDEPGIAPTLVEPPAVHSVQHQPDVPGI 240

Query: 802  SERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENHQETSHR 861
            SERRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVD+EDNAKRLLLDEN+QETS R
Sbjct: 241  SERRTGQPSSCPRKSELKIGESSAFFTYVKSRTVKNKAVDIEDNAKRLLLDENYQETSQR 300

Query: 862  AAHLPPIQENGEALESHSQGDEFPSS-SFPDSFSVERSCTPPAGTEVHRERNINEENCSQ 921
            A  LPPIQE GEALESHSQGDE PSS SFPDSFSVERSCTPPA TEVHRERNINEENCSQ
Sbjct: 301  AVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAVTEVHRERNINEENCSQ 360

Query: 922  ALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHH 981
             LVH R+GSQ+D+SGLPVQTQTAYPFYMPEGMMSAQ+YQ NLHDMQNHAAMMSQYGHFHH
Sbjct: 361  VLVHTRNGSQLDISGLPVQTQTAYPFYMPEGMMSAQMYQNNLHDMQNHAAMMSQYGHFHH 420

Query: 982  CPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRREAALIK 1041
            CPPNV+GVASYPYYPMNICLQPGQMPT TT+ HSWPS GNSSSNEAKSNK DRREAALIK
Sbjct: 421  CPPNVNGVASYPYYPMNICLQPGQMPT-TTNTHSWPSLGNSSSNEAKSNKLDRREAALIK 480

Query: 1042 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDVEDEDEE 1101
            FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS DDVEDEDE+
Sbjct: 481  FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDVEDEDED 540

Query: 1102 EELLSRDSSHEDDGSGY 1116
            EELLSRDSSHEDDGSGY
Sbjct: 541  EELLSRDSSHEDDGSGY 556

[Close]
BLAST of Clc04G12540 vs. ExPASy TrEMBL
Match: A0A5D3BIG1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001040 PE=4 SV=1)

HSP 1 Score: 1010.4 bits (2611), Expect = 5.9e-291
Identity = 494/552 (89.49%), Postives = 519/552 (94.02%), Query Frame = 0 

Query: 4   NQTAIPAIGSSSRVRQQFLFSVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYIS 63
           N+TAI AIG SSRVRQQF+FSVLK C SVRNL KIHAQIVVSGF+QKNYIL +LLSLY S
Sbjct: 12  NETAISAIGRSSRVRQQFVFSVLKSCTSVRNLVKIHAQIVVSGFSQKNYILSHLLSLYTS 71

Query: 64  FGSLGSAQKVFEDIRTPSTTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFL 123
           FGSLGSAQKVFEDI  PSTTVWNQII+GHARSKT +ESIELFKRMT+AEVEA+ FTYSFL
Sbjct: 72  FGSLGSAQKVFEDITAPSTTVWNQIIKGHARSKTSKESIELFKRMTLAEVEANEFTYSFL 131

Query: 124 LSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEM 183
           LS CVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGGG GDFDLKRARY+FDEM
Sbjct: 132 LSGCVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGGGGDFDLKRARYLFDEM 191

Query: 184 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFN 243
           PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNV+TWT MVAG AQNG CKLALSLF+
Sbjct: 192 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFD 251

Query: 244 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMY 303
           QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YVERTWRSRH PVLVSLNNALMHMY
Sbjct: 252 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALMHMY 311

Query: 304 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEI 363
           ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCG EAIR+FQLMLCSGQNEVRPDEI
Sbjct: 312 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEI 371

Query: 364 TFIGVLTACSHAGLIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIES 423
           TFIG LTACSHAGLI DGI++FQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEAL LIES
Sbjct: 372 TFIGALTACSHAGLISDGIQLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALSLIES 431

Query: 424 MPMKPNNAVWGALLSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRW 483
           MPMKPNNAVWGALLSGCR+HKNDEI SHVA+ L+F IDP+ QAAGYFMLLANVYAAD RW
Sbjct: 432 MPMKPNNAVWGALLSGCRLHKNDEIVSHVARHLSFGIDPNNQAAGYFMLLANVYAADGRW 491

Query: 484 RDTAIVRQNMLDIGVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQARME 543
           +DTA VR+NM DIGVKKPSGRSWIEINGV+C FVAG+ETHKDV+LIYEMLGNIT QARME
Sbjct: 492 QDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFVAGEETHKDVNLIYEMLGNITRQARME 551

Query: 544 SCKSETISEALV 556
           SCKS+TISEA +
Sbjct: 552 SCKSKTISEAFI 563

[Close]
BLAST of Clc04G12540 vs. ExPASy TrEMBL
Match: A0A1S3BBI0 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488102 PE=4 SV=1)

HSP 1 Score: 1010.4 bits (2611), Expect = 5.9e-291
Identity = 494/552 (89.49%), Postives = 519/552 (94.02%), Query Frame = 0 

Query: 4   NQTAIPAIGSSSRVRQQFLFSVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYIS 63
           N+TAI AIG SSRVRQQF+FSVLK C SVRNL KIHAQIVVSGF+QKNYIL +LLSLY S
Sbjct: 12  NETAISAIGRSSRVRQQFVFSVLKSCTSVRNLVKIHAQIVVSGFSQKNYILSHLLSLYTS 71

Query: 64  FGSLGSAQKVFEDIRTPSTTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFL 123
           FGSLGSAQKVFEDI  PSTTVWNQII+GHARSKT +ESIELFKRMT+AEVEA+ FTYSFL
Sbjct: 72  FGSLGSAQKVFEDITAPSTTVWNQIIKGHARSKTSKESIELFKRMTLAEVEANEFTYSFL 131

Query: 124 LSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEM 183
           LS CVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGGG GDFDLKRARY+FDEM
Sbjct: 132 LSGCVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGGGGDFDLKRARYLFDEM 191

Query: 184 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFN 243
           PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNV+TWT MVAG AQNG CKLALSLF+
Sbjct: 192 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFD 251

Query: 244 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMY 303
           QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YVERTWRSRH PVLVSLNNALMHMY
Sbjct: 252 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALMHMY 311

Query: 304 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEI 363
           ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCG EAIR+FQLMLCSGQNEVRPDEI
Sbjct: 312 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEI 371

Query: 364 TFIGVLTACSHAGLIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIES 423
           TFIG LTACSHAGLI DGI++FQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEAL LIES
Sbjct: 372 TFIGALTACSHAGLISDGIQLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALSLIES 431

Query: 424 MPMKPNNAVWGALLSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRW 483
           MPMKPNNAVWGALLSGCR+HKNDEI SHVA+ L+F IDP+ QAAGYFMLLANVYAAD RW
Sbjct: 432 MPMKPNNAVWGALLSGCRLHKNDEIVSHVARHLSFGIDPNNQAAGYFMLLANVYAADGRW 491

Query: 484 RDTAIVRQNMLDIGVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQARME 543
           +DTA VR+NM DIGVKKPSGRSWIEINGV+C FVAG+ETHKDV+LIYEMLGNIT QARME
Sbjct: 492 QDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFVAGEETHKDVNLIYEMLGNITRQARME 551

Query: 544 SCKSETISEALV 556
           SCKS+TISEA +
Sbjct: 552 SCKSKTISEAFI 563

[Close]
BLAST of Clc04G12540 vs. ExPASy TrEMBL
Match: A0A0A0LQ70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038380 PE=3 SV=1)

HSP 1 Score: 1007.3 bits (2603), Expect = 5.0e-290
Identity = 519/558 (93.01%), Postives = 535/558 (95.88%), Query Frame = 0 

Query: 562  MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 621
            MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS
Sbjct: 1    MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVIS 60

Query: 622  VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 681
            VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP
Sbjct: 61   VSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVP 120

Query: 682  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDAN 741
            IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR LGLAEKNILNYEFD+VASDPSDAN
Sbjct: 121  IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYEFDLVASDPSDAN 180

Query: 742  TNSTTLFSDDTDDKSRRSTNPDMAIA--ATHQEDESGIAAALVEPPAVHTVKHQPDVPGI 801
            TNSTTLFSDDTDDKSRRSTNP+M I   ATHQEDE GIAA +VEPPAVH+V+HQPDVPGI
Sbjct: 181  TNSTTLFSDDTDDKSRRSTNPEMGITAPATHQEDEPGIAATIVEPPAVHSVQHQPDVPGI 240

Query: 802  SERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVDVEDNAKRLLLDENHQETSHR 861
            SERRTGQPSSCPRKSELKIGESSAFFTYVKSR VKNKAVD+ED+ KRLLL+ENHQETS R
Sbjct: 241  SERRTGQPSSCPRKSELKIGESSAFFTYVKSRTVKNKAVDIEDSTKRLLLEENHQETSQR 300

Query: 862  AAHLPPIQENGEALESHSQGDEFPSS-SFPDSFSVERSCTPPAGTEVHRERNINEENCSQ 921
            A  LPPIQE GEALESHSQGDE PSS SFPDSFSVERSCTPPAGT+VHRERNINEENCSQ
Sbjct: 301  AVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAGTDVHRERNINEENCSQ 360

Query: 922  ALVHPRDGSQVDMSGLPVQTQT-AYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFH 981
             L+H R+GSQ+D+SGLPVQTQT AYPFYMPEGMMSAQ+YQ NLH+MQNHAAMMSQYGHFH
Sbjct: 361  VLLHSRNGSQLDISGLPVQTQTAAYPFYMPEGMMSAQIYQNNLHEMQNHAAMMSQYGHFH 420

Query: 982  HCPPNVSGVASYPYYPMNICLQPGQMPTSTTHIHSWPSFGNSSSNEAKSNKFDRREAALI 1041
            HCPPNVSGVASYPYYPMNICLQPGQMPT TT+ HSWPS GNSSSNEAKSNKFDRREAALI
Sbjct: 421  HCPPNVSGVASYPYYPMNICLQPGQMPT-TTNTHSWPSLGNSSSNEAKSNKFDRREAALI 480

Query: 1042 KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASVDDVEDEDE 1101
            KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPAS DDVEDEDE
Sbjct: 481  KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDVEDEDE 540

Query: 1102 EEELLSRDSSHEDDGSGY 1116
            EEELLSRDSSHEDDGSGY
Sbjct: 541  EEELLSRDSSHEDDGSGY 557

[Close]
BLAST of Clc04G12540 vs. TAIR 10
Match: AT5G61380.1 (CCT motif -containing response regulator protein )

HSP 1 Score: 499.6 bits (1285), Expect = 6.6e-141
Identity = 331/640 (51.72%), Postives = 388/640 (60.62%), Query Frame = 0 

Query: 567  LNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSAR 626
            ++LN +C         GGDGFIDRS+VRILLCDNDS S  EVF LL +CSYQV +V SAR
Sbjct: 1    MDLNGEC--------KGGDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSAR 60

Query: 627  QVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKC 686
            QVIDALNAEGP+IDIIL+E+DLPMAKGMKML+YITRDK+LRRIPVIMMS QDEVP+VVKC
Sbjct: 61   QVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKC 120

Query: 687  LRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDANTNSTT 746
            L+LGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+L+Y+FD+V SD SD NTNST 
Sbjct: 121  LKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTN 180

Query: 747  LFSDDTDDKSRRSTNP------------DMAIAATHQED---------ESGIAAALVEPP 806
            LFSDDTDD+S RSTNP             +A A  H  D          S +A   +EPP
Sbjct: 181  LFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEPP 240

Query: 807  AVHTVKHQPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRAVKNKAVD---VED 866
              H      + P        Q SS P+KS LKIGESSAFFTYVKS  ++    D   V+ 
Sbjct: 241  LDHLAGSHHE-PMKRNSNPAQFSSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDG 300

Query: 867  N--------------------------AKRL---------------LLDENHQETSHRAA 926
            N                          A+R                L++ N     HR A
Sbjct: 301  NGSLHLHRGLAEKFQVVASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGA 360

Query: 927  -------------HLPPIQENGEALESHSQGDEFPS-SSFPDSFSVERSCTPPAGTEVHR 986
                         +      +    + HSQG+   + +S+P   S+ERS T P   E H 
Sbjct: 361  AEKFQVVASEGINNTKQAHRSRGTEQYHSQGETLQNGASYP--HSLERSRTLPTSMESH- 420

Query: 987  ERNINEENCS---QALVHPRDGSQVDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQ 1046
             RN  E N +    A+   +D SQVD SG       AYP+YM  G+M+  + Q       
Sbjct: 421  GRNYQEGNMNIPQVAMNRSKDSSQVDGSGF--SAPNAYPYYM-HGVMNQVMMQS------ 480

Query: 1047 NHAAMMSQYGH-FHHCPPN-VSGVASYPYY--PMNICLQPGQMPTSTTHI----HSWPSF 1106
              AAMM QYGH   HC PN  +G+  YPYY  PMN  LQ  QM      +    HSW   
Sbjct: 481  --AAMMPQYGHQIPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHSWSPA 540

Query: 1107 GNSSSNEAKSNKFDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 1115
            GN  SNE + NK DRRE AL+KFR+KR +RCFDKKIRYVNRKRLAERRPRV+GQFVRK+N
Sbjct: 541  GNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMN 600

[Close]
BLAST of Clc04G12540 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-106
Identity = 209/509 (41.06%), Postives = 302/509 (59.33%), Query Frame = 0 

Query: 24  SVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGS---LGSAQKVFEDIRTP 83
           S L+ C     L +IHA+++ +G  Q +Y +   LS  IS  S   L  AQ VF+    P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 84  STTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIH 143
            T +WN +IRG + S  P+ S+ L++RM  +    + +T+  LL AC     F E  QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 144 GRVLANGYWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVR 203
            ++   GY +++Y   +LIN YA  G     + K A  +FD +P+ + V WNS++ GYV+
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTG-----NFKLAHLLFDRIPEPDDVSWNSVIKGYVK 198

Query: 204 RGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVAA 263
            G  D A  +F +M E+N  +WTTM++G  Q    K AL LF++M+ + VE D V+L  A
Sbjct: 199 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 258

Query: 264 LSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVFEEMP 323
           LSACA+LG L  GKWIH Y+ +T R R   V   L   L+ MYA CG M+ A +VF+ + 
Sbjct: 259 LSACAQLGALEQGKWIHSYLNKT-RIRMDSV---LGCVLIDMYAKCGEMEEALEVFKNIK 318

Query: 324 QRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAGLIID 383
           +++  +W+++I+G+A  G G EAI  F  M   G   ++P+ ITF  VLTACS+ GL+ +
Sbjct: 319 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMG---IKPNVITFTAVLTACSYTGLVEE 378

Query: 384 GIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGALLSGC 443
           G  +F SM + + + P IEHYGC+VDLL RAGLL EA R I+ MP+KPN  +WGALL  C
Sbjct: 379 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 438

Query: 444 RIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDIGVKK 503
           RIHKN E+   +  ++   IDP     G ++  AN++A DK+W   A  R+ M + GV K
Sbjct: 439 RIHKNIELGEEIG-EILIAIDP--YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 498

Query: 504 PSGRSWIEINGVVCDFVAGDETHKDVSLI 530
             G S I + G   +F+AGD +H ++  I
Sbjct: 499 VPGCSTISLEGTTHEFLAGDRSHPEIEKI 512

[Close]
BLAST of Clc04G12540 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 363.2 bits (931), Expect = 7.3e-100
Identity = 206/589 (34.97%), Postives = 319/589 (54.16%), Query Frame = 0 

Query: 9   PAIGSSSRVRQQFLFSVLKCCLSVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGSLG 68
           P+  SS R+ ++ L  + KC  ++  + ++HAQI+     +  +I   L+S         
Sbjct: 10  PSWVSSRRIFEERLQDLPKCA-NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTN 69

Query: 69  SAQKVFEDIRTPSTTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACV 128
            A +VF  ++ P+  + N +IR HA++  P ++  +F  M    + AD FTY FLL AC 
Sbjct: 70  LAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS 129

Query: 129 RSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGGRGDFD---------------- 188
                   + +H  +   G  S++YV   LI+ Y+  GG G  D                
Sbjct: 130 GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 189

Query: 189 ------------LKRARYMFDEMPDSNVVGWNSLLAGYVR-------------------- 248
                       L+ AR +FDEMP  +++ WN++L GY R                    
Sbjct: 190 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 249

Query: 249 -----------RGDFDGARKVFDEM--PERNVQTWTTMVAGLAQNGHCKLALSLFNQMRR 308
                       GD + AR +FD+M  P +NV TWT ++AG A+ G  K A  L +QM  
Sbjct: 250 SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 309

Query: 309 AGVELDQVALVAALSACAELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCG 368
           +G++ D  A+++ L+AC E G L+LG  IH  ++R+    +  VL    NAL+ MYA CG
Sbjct: 310 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL----NALLDMYAKCG 369

Query: 369 VMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIG 428
            +  A+ VF ++P+++ VSW++++ G    G G+EAI +F  M   G   +RPD++TFI 
Sbjct: 370 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG---IRPDKVTFIA 429

Query: 429 VLTACSHAGLIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMK 488
           VL +C+HAGLI +GI  F SM K + ++PQ+EHYGC+VDLL R G L EA++++++MPM+
Sbjct: 430 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 489

Query: 489 PNNAVWGALLSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTA 537
           PN  +WGALL  CR+H   +IA  V   L  ++DP     G + LL+N+YAA + W   A
Sbjct: 490 PNVVIWGALLGACRMHNEVDIAKEVLDNLV-KLDPCD--PGNYSLLSNIYAAAEDWEGVA 549

[Close]
BLAST of Clc04G12540 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 357.5 bits (916), Expect = 4.0e-98
Identity = 201/514 (39.11%), Postives = 305/514 (59.34%), Query Frame = 0 

Query: 31  SVRNLAKIHAQIVVSGFAQKNYILVNLLSLYISFGSLGSAQKVFEDIRTPSTTVWNQIIR 90
           +++ L + H  ++++G  + N  +   +    + G L  A  VF     P+T + N +IR
Sbjct: 27  NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86

Query: 91  GHARSKTPQE---SIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIHGRVLANG 150
             +    P     +I +++++     + D FT+ F+L   VR      G QIHG+V+  G
Sbjct: 87  ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146

Query: 151 YWSNLYVRTNLINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVRRGDFDGA 210
           + S+++V T LI +Y + GG GD     AR MFDEM   +V  WN+LLAGY + G+ D A
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGD-----ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 206

Query: 211 RKVFDEMP--ERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVAALSACA 270
           R + + MP   RN  +WT +++G A++G    A+ +F +M    VE D+V L+A LSACA
Sbjct: 207 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 266

Query: 271 ELGDLTLGKWIHRYVERTWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVFEEMPQRNTV 330
           +LG L LG+ I  YV+    +R     VSLNNA++ MYA  G +  A  VFE + +RN V
Sbjct: 267 DLGSLELGERICSYVDHRGMNR----AVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 326

Query: 331 SWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAGLIIDGIRVF 390
           +W++II G A  G G EA+ +F  M+ +G   VRP+++TFI +L+ACSH G +  G R+F
Sbjct: 327 TWTTIIAGLATHGHGAEALAMFNRMVKAG---VRPNDVTFIAILSACSHVGWVDLGKRLF 386

Query: 391 QSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGALLSGCRIHKN 450
            SM   +G+ P IEHYGCM+DLL RAG L EA  +I+SMP K N A+WG+LL+   +H +
Sbjct: 387 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 446

Query: 451 DEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDIGVKKPSGRS 510
            E+      +L  +++P+   +G +MLLAN+Y+   RW ++ ++R  M  IGVKK +G S
Sbjct: 447 LELGERALSEL-IKLEPNN--SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGES 506

Query: 511 WIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQ 540
            IE+   V  F++GD TH  V  I+E+L  +  Q
Sbjct: 507 SIEVENRVYKFISGDLTHPQVERIHEILQEMDLQ 525

[Close]
BLAST of Clc04G12540 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-97
Identity = 194/532 (36.47%), Postives = 309/532 (58.08%), Query Frame = 0 

Query: 24  SVLKCCLSVRNLAK---IHAQIVVSGFAQKNYILVNLLSLYISFGSLGSAQKVFEDIRTP 83
           SVL  C  + ++ K   +H+ I  S F    YI   L+ +Y   G++  AQ+VF+++   
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216

Query: 84  STTVWNQIIRGHARSKTPQESIELFKRMTVAEVEADGFTYSFLLSACVRSRLFREGEQIH 143
           +   WN +I    ++    E++++F+ M  + VE D  T + ++SAC      + G+++H
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276

Query: 144 GRVLANGYWSNLYVRTN-LINLYANGGGRGDFDLKRARYMFDEMPDSNVVGWNSLLAGYV 203
           GRV+ N    N  + +N  +++YA         +K AR++FD MP  NV+   S+++GY 
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCS-----RIKEARFIFDSMPIRNVIAETSMISGYA 336

Query: 204 RRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALSLFNQMRRAGVELDQVALVA 263
                  AR +F +M ERNV +W  ++AG  QNG  + ALSLF  ++R  V     +   
Sbjct: 337 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 396

Query: 264 ALSACAELGDLTLGKWIHRYVER---TWRSRHFPVLVSLNNALMHMYASCGVMDLAYKVF 323
            L ACA+L +L LG   H +V +    ++S      + + N+L+ MY  CG ++  Y VF
Sbjct: 397 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD-IFVGNSLIDMYVKCGCVEEGYLVF 456

Query: 324 EEMPQRNTVSWSSIITGFAKQGCGEEAIRVFQLMLCSGQNEVRPDEITFIGVLTACSHAG 383
            +M +R+ VSW+++I GFA+ G G EA+ +F+ ML SG+   +PD IT IGVL+AC HAG
Sbjct: 457 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE---KPDHITMIGVLSACGHAG 516

Query: 384 LIIDGIRVFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLSEALRLIESMPMKPNNAVWGAL 443
            + +G   F SM + FGV P  +HY CMVDLL RAG L EA  +IE MPM+P++ +WG+L
Sbjct: 517 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 576

Query: 444 LSGCRIHKNDEIASHVAKQLAFEIDPSKQAAGYFMLLANVYAADKRWRDTAIVRQNMLDI 503
           L+ C++H+N  +  +VA++L  E++PS   +G ++LL+N+YA   +W D   VR++M   
Sbjct: 577 LAACKVHRNITLGKYVAEKL-LEVEPSN--SGPYVLLSNMYAELGKWEDVMNVRKSMRKE 636

Query: 504 GVKKPSGRSWIEINGVVCDFVAGDETHKDVSLIYEMLGNITSQARMESCKSE 549
           GV K  G SWI+I G    F+  D++H     I+ +L  + ++ R E   +E
Sbjct: 637 GVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676

The following BLAST results are available for this feature:
BLAST of Clc04G12540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895403.16.3e-30392.45pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida][more]
XP_038894062.11.2e-30196.21two-component response regulator-like APRR1 [Benincasa hispida][more]
TYJ98908.11.8e-29493.78two-component response regulator-like APRR1 [Cucumis melo var. makuwa][more]
KAE8652513.17.7e-29392.92hypothetical protein Csa_013415 [Cucumis sativus][more]
XP_008444691.18.5e-29293.90PREDICTED: two-component response regulator-like APRR1 [Cucumis melo] >XP_008444... [more]
BLAST of Clc04G12540 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LKL29.2e-14051.72Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Q9FJY74.3e-10541.06Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9LS721.0e-9834.97Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Q9FMA15.7e-9739.11Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
Q9SIT73.7e-9636.47Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
BLAST of Clc04G12540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BL568.9e-29593.78Two-component response regulator-like APRR1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BBP24.1e-29293.90two-component response regulator-like APRR1 OS=Cucumis melo OX=3656 GN=LOC103487... [more]
A0A5D3BIG15.9e-29189.49Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BBI05.9e-29189.49pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like OS=Cuc... [more]
A0A0A0LQ705.0e-29093.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038380 PE=3 SV=1[more]
BLAST of Clc04G12540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G61380.16.6e-14151.72CCT motif -containing response regulator protein [more]
AT5G66520.13.1e-10641.06Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G29230.17.3e-10034.97Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G56310.14.0e-9839.11Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G13600.12.6e-9736.47Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 593..708
e-value: 1.9E-18
score: 77.3
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 595..706
e-value: 2.3E-16
score: 60.0
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 594..712
score: 32.648956
NoneNo IPR availableGENE3D3.40.50.2300coord: 593..804
e-value: 1.3E-26
score: 96.1
NoneNo IPR availablePIRSRPIRSR026389-3PIRSR026389-3coord: 593..709
e-value: 0.0034
score: 13.4
NoneNo IPR availablePIRSRPIRSR002937-1PIRSR002937-1coord: 591..713
e-value: 1.9E-7
score: 28.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 871..912
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..760
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1080..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 790..814
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1088..1104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 878..897
NoneNo IPR availablePANTHERPTHR47928:SF54OS09G0411600 PROTEINcoord: 13..538
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 13..538
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 169..282
e-value: 1.9E-26
score: 94.5
coord: 35..168
e-value: 8.3E-16
score: 59.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 283..355
e-value: 1.0E-12
score: 50.1
coord: 356..525
e-value: 2.8E-22
score: 81.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 187..220
e-value: 6.6E-8
score: 32.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 325..354
e-value: 1.3E-5
score: 23.0
coord: 191..219
e-value: 4.7E-7
score: 27.6
coord: 221..253
e-value: 6.3E-7
score: 27.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 400..425
e-value: 0.015
score: 15.5
coord: 118..147
e-value: 0.67
score: 10.3
coord: 325..354
e-value: 7.6E-6
score: 25.8
coord: 221..250
e-value: 1.2E-6
score: 28.4
coord: 297..323
e-value: 0.0056
score: 16.8
coord: 84..109
e-value: 0.021
score: 15.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 8.878711
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 9.865228
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..221
score: 12.046526
IPR010402CCT domainPFAMPF06203CCTcoord: 1032..1074
e-value: 2.1E-14
score: 53.3
IPR010402CCT domainPROSITEPS51017CCTcoord: 1032..1074
score: 15.467442
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 591..719

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G12540.2Clc04G12540.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0016310 phosphorylation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048511 rhythmic process
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0005515 protein binding