Clc04G11893 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTGAATCTAAATTAATATGAACAAATCAGATTCTAAAAAGAAATATATATATATTATTAATTCGAGTCATACTATATTTAATTGAGATAATATCCACGCCAATGTTCATCCATTTTAAAGGAACCGTTAAACCAAAAACATCGCCACCCCAACTTTATAATATTCTTATTATTATCTTCCAAATAAAGTTAAATTTCTTTAATCAAATATTTTAGAATTGAAACTAATAATTGGTTATTTCTCATTAAAAAGCATATTAATAATCCATACTGAACAAACTCGTTTTTGATTTGCCATTTACACATATAACCCTTCCAAAGGGTAATTTAACAAACAAAAATGTCCAAATTACTTTATACTATTATATAAACTTAGCAATGTGAGGGAGAGGGAACTCAAAATTAAAAGTGTTATCATTCTCACCTTCAAAATTATGATCATTCTTCTTAGAAGAATTATAAGTGCTATCAATAACTTCTTTAGTCTAATTACAAACTTCTTTAACACTTTAATATTATTCCGATCCCAACCGAATGACCTAGTAACAGAAACCCGTCACGAGCCGCCAGGCTCGAGGCCGCGAACCGCGGCGGAGATGGTAATGCAATGGGAAAAATTGATGGTTACATTTTGTGTAGCCTCAGCCATTGCCATAGCCACCGTATCACTTCAAATTGAAACCAGGCTTTCATTAATGTTTCATTTTCTGTCAGTTATGTTAATGGGTTGTTTTGTTTTTACAGCCTTAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATTTGAGTTCCAAATTTTAACATTGGTCATCTATCTCTTCTTCTTAGTCATCATTTTAATATGTTATTTTGTATAGTAATTGGGTGCACTCCATCTCCATATTTCCCTTTCAATCTTGTCTTTCTTAGAAAAAATAAAAATTTGTCATATGACAACTTGTGACTAACATTTGAAACTGCAGTTTGAAATGTACCCAAATATTTTTATTTTATATATATAATTGAACATGTTGGTAAACCAAGGACTACCTGCCCTACTCTCTTAAATTTTGTAAATTTTGCATAAATATAACAATTTGGTTTAATTGGCCAAAGGAAAAGGGAATTCAGTGATTATTGATATTTAGAGGAGAAATACTTGGCAAAGCCACAAATTCTGCCACAAATTTTATATAGGAACACTATATGTATAAGTCTAAGAAAAAAAATTATTTACAAATGAATGTAAAAAATTGTATTCATAACTTCATAAATTAGCTAATTTAATATATAACTATTGGGCTCGACGAGTTTTCATGTTTTGAAATCGATTCATGATAACTTTAATATCTAGTTTATCAAATAAATTCTTTTAAATTGATGCACCTAATTGAGTTCGATACTCAACTTGTACTTGATTAGGGATCCTAAATTCTTAGTATATATGTTGTTTTTGTTTCAAAAGAGCCTCACATTTACCCAAAGCCTTATTGTGTGCACTATTATGACCACCAACAAGAATATGCAATTTCTCTTTTTTCTTCCAATTGGAAAAATTCTTCACTAACAAAACATTCACCTCTTGACTCTTCACTTACTTCTGATTTGAATAGATAATAACATGAACAAAATGCAACATCCTTTAAAATGCTATATTCTAACCAATTAGAATATTTATTAAACCAAGTTGGATTAGATAGTCTTGACTTTGTACCAAATTTCTTAAGTGGAAAAATATAATATTCGATGTTGACAAGGGTCTTTTAGTAAATATGCTCAACGAACTTGATCTCGAATATTATAATTATAATCATAAATTTTGGTTCTTAGAGCAAGATATGCAGGTAGTTCTTCTAGATTGATTTTTGTATAAGATCTATCAAAATCCAAACTATTTTTCTTCGTTGAAGATGATGCCTCCTTAGTTTCTATTTTTTAATATCTCTCCACAGTAATTTTGAATTAACTCTAAAAAATACAAAAAAAAACTTAAAGTCTAAGAAGATTTTAAAACTTACTTTCGTATATTCAAACGAGTGACAACAAATAATCCTCTAGTTTGAACTCTAAAATTAATTTTAAAAACCTATACGAATAATGTAACACCCGTATATAACATGGAAAAAAACGAAAATATATAGAGTGTAATATAAATAGAAAAATTATGTAAAAAAAGAAAAAGAAAAAAAGTTTCTAAACACTCATGATTATGTGCAGCTCACTAGTCATGTATTTTTTTAAAAAGTGGTTCTCACCTTTCTGATGTGGAAACTCAATATATTGTTTAAAGGAACTTTGAAGAATACTTCAGACAACCATCTTACAACAATGCATTATTGGTAAATTCTTTTTATGTTTTTTAACTTTTAAGATTTCTTATGTGA ATGAATCTAATTACAAACTTCTTTAACACTTTAATATTATTCCGATCCCAACCGAATGACCTAGTAACAGAAACCCGTCACGAGCCGCCAGGCTCGAGGCCGCGAACCGCGGCGGAGATGGTAATGCAATGGGAAAAATTGATGGTTACATTTTGTGTAGCCTCAGCCATTGCCATAGCCACCGTATCACTTCAAATTGAAACCAGGCTTTCATTAATGTTTCATTTTCTGTCAGTTATGTTAATGGGTTGTTTTGTTTTTACAGCCTTAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATTTGAATTTCTTATGTGA ATGAATCTAATTACAAACTTCTTTAACACTTTAATATTATTCCGATCCCAACCGAATGACCTAGTAACAGAAACCCGTCACGAGCCGCCAGGCTCGAGGCCGCGAACCGCGGCGGAGATGGTAATGCAATGGGAAAAATTGATGGTTACATTTTGTGTAGCCTCAGCCATTGCCATAGCCACCGTATCACTTCAAATTGAAACCAGGCTTTCATTAATGTTTCATTTTCTGTCAGTTATGTTAATGGGTTGTTTTGTTTTTACAGCCTTAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATTTGAATTTCTTATGTGA MNLITNFFNTLILFRSQPNDLVTETRHEPPGSRPRTAAEMVMQWEKLMVTFCVASAIAIATVSLQIETRLSLMFHFLSVMLMGCFVFTALAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYAFEFLM Homology
BLAST of Clc04G11893 vs. NCBI nr
Match: KAG6584385.1 (hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24 Identity = 69/97 (71.13%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Clc04G11893 vs. NCBI nr
Match: KAG6572911.1 (hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.4 bits (233), Expect = 8.0e-16 Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of Clc04G11893 vs. NCBI nr
Match: KAE8652531.1 (hypothetical protein Csa_013077, partial [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 9.2e-12 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of Clc04G11893 vs. NCBI nr
Match: KAF3947053.1 (hypothetical protein CMV_026760 [Castanea mollissima]) HSP 1 Score: 66.6 bits (161), Expect = 1.8e-07 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of Clc04G11893 vs. NCBI nr
Match: KAF3947054.1 (hypothetical protein CMV_026761 [Castanea mollissima]) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-07 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of Clc04G11893 vs. ExPASy TrEMBL
Match: A0A0A0LQB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14 Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of Clc04G11893 vs. ExPASy TrEMBL
Match: A0A0A0LSX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 6.8e-13 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Clc04G11893 vs. ExPASy TrEMBL
Match: A0A0A0LCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.9e-11 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of Clc04G11893 vs. ExPASy TrEMBL
Match: A0A7N2R866 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10 Identity = 38/86 (44.19%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Clc04G11893 vs. ExPASy TrEMBL
Match: A0A7N2M5A3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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