Clc04G08850 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G08850
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pectate lyase
Location	ClcChr04: 22546575 .. 22550802 (-)
RNA-Seq Expression	Clc04G08850
Synteny	Clc04G08850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAATTCACGATAGTAGTAGTAACTGCAATGTCAAATTTGTAATTGTAAAAATTAAATACAAATATTAAAATTAAACGCTAAAAGTTTTAATAGTTTATTCCAAATAATAAAAATCGAACTTTGTTACCATCTATAAGTTTTAAGAGTCTAAATTGGCATGAATTTGAAACTCAAATTTTTATAATTGAAAGTTTGATATGTTTCAACCTATGAAAATGTGGATAGATGAATTAAAATTCTAATACCTTGATCCCAACGCAAGGAAGAAGACGATGACCTTTTTCCAGAGAGGAGAAAGGTGTGCAATTCCTCCACCATAACCCACATTCTGTGTTTCACCTTAACAAATTTTACAGAGAAGCTTCGATCCGTAGCCATAGCTGTAAATTTACTGTTTCGGTTTGCCCATACAAATCCAATTAAATCCAAACGCTTTCTGTTAATGGGTAACGCCCATGGCCACCGCAAGCATTTCAACCATGGCGTAAATACCTCTCCACCCACTAATAACGCTCCTTCTCCCTTCAATAAATACTCCTCATCTGAACCCACTTCTCGAAATTCCACCTCCACCTCGAAGATGGCGTCCTTGCCCTACGCCCATGTTGATTCCAGCCTGCGAGCCCTTGCCGCTCAGGCTGAGGGCTTTGGCCGCTCTGCCATTGGTGGTCTCCATGGTTCTGTTTATTGTGTCACTAATTTAGCAGGTGCTATTTGCTTTCCCCTGTTTATGAACAAATTCAATTTGGTGGTTAGTGAAGTTGTGGGGATGCAGGAATTGAGATGTTGAAGTGGGAAATGTGTTTTTTTTCTTTTTTTTTACTTGACTTAGAAATATCATGATTTCTTTGCTTTTTCTTGATGTGGAGAATTTTGGAAACTGATTGAAATTAGAGTTTTTCCTTTATGAAGTTGTGGGGATGGGGGAAGTGTTTGGATGCAGGAATTGAGGTGTTTAACATTTGGGAAATGTATTTTTTTTCTTGACTTGGCTTAGAATTATCATGATTTCTCTGCTTTTTCTTGATGTGGAGAACTTTGGAAACTGATTGAAATTAGAGTTTTTCCTTTATGAATCATCCCCTTTTTGTGCATTTCCTTTGATTGTTTGAAGTTGGGATTAGAATTCAATTAGTAATTGAGCTGTGGTTAGAACTTAGAAGAGACTTTCTTGCATAAGATACATGAATGATCTTAGAGTTCTCTCTTGTTTTGCGTTTTGTTTTTCTTTTTTATGGTGTGTGTGTGTGTGTTTCTTTTCCCCTTTTTCGTATTTTTTGTTAAGTGGGTGAGGGGGAGGAGCTGGATTTTTGTTGAGGAATTTGGCAATCATAAAGGCTAGGGAGTTGGATTTAGAATTTTGTTCTTTATGCCTTGTTGGGTTGTATTTAAGGAGTTTTACAATTGCTTCCTAATTCTCTATACACATTGTACACAATACTTCTGTTGGTTCTGCCTTTCAGTTTGTTAAGGAATTCTTAAATCTGTATTTTCTTGTTTGTTGTAGATGATGGTCCGGGATCACTTAGGTTTGGATGTCGTAAGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCGGGCACAATTCACTTGTCTACATATCTGAGTGTATCATCGTACAAGACTGTAGATGGTCGTGGTCAAAGGATAAAACTTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATCATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAATTCAAATTAAGCCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCCGAGGAAGCACGGATATCACTATTTCTAGGTGGGAGAAAGCTTCACCTAAGAGCTTTCTTGATGCCTTAACAATCTGACATTTTGCTTAATTTCTTTGCCCATTGTCTATCTGTAGGTGTCACTTCTCACAGCATGACAAGACAATGCTCATCGGAGCAGATCCCTCTCACATTGGCGACCGATGTATCCGTGTCACTATCCACCATTGTTTTTTCGACGGTACACGTCAACGGCATCCACGTGTTAGATATGCTCAAGTCCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGGTCTTGATACACCTCACTTTTTTCCAAATACATTTTAGTTTAAACTTCTCCAAAGATAGGCCATTTTAGTCTGCTGCTTTCATTGTCAATTAGATTTACTCTCAGTGCAACATATATGAAGCAGGAGCGAAAAAGGTGGCGTTTAAATATCTAACTGAAAAGGTAAATTTATTCTTTTCCATTCTCTATAATTTGAGTCAACATGTAGATTACCCATGTGAGTGTCCTATTTTCTGTATTTACACTCTATACATCCTTAAACATTGATGTAACTAAGAACATGTTAGTATTGAGAATTCAAGTTTCCATTGGACAGGACGGAGTTGTACGATGATTGGGGTCTTGATTTTATAACACATGAGACCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGAAGCAAAATAGCCCCAATCATGCCCTCTGCCACCAAGCTTATGTGACCACGTTAAGGGTATATTGATTATTAGTTTGATAAGTTGTTAGGGTATTTTGTAGTAAATAGTAAATGACAAATTAGGTGTACTGATTCTGTTGGTTTAGAGGCAAGTAATCTCAAGAGAGGGAAGATCCAAGTTCCTCGAATTACTTGGTTTATATTGTAAATTCATCTTTTACATTCCAATATGGTTTAGTATTGCTCGTTCCTTCCATTACCTTATGAACTCGCTTACACTACTAAGAGGTACAGATACAGATAGGACACGACACGGACACGGACACGGACACATGACACATCATTTTTAAAAAATATATATCATTTTTATACCACAAGAAAATTTTAAGTAAATGAGTTAGATGCATTTATATGCTTAAAAAATTAATTTGATGTATTTCACTCTCAAAATTAATTATTATTGTCATATATGTGCCTTTTTATTCTACTCAACATCTGTTCTATGCATGTCTAGCACATCTATTGTCCTAACAAGTGTCTGATATGTGTCTACAAGTGTCAAGCGTCCAAATGAGAAACATGTGTCAGACACAGATACGCTAGCCAAACTAAAGCGTTCGTGCTTCTTAAATTTACACAGAGTCACATATCCATTCTCACTCTTTTAACCTTCTTTCTACAATATATGTTAACAATCGGAGGTCTGTTTGTCTAGTTGCTTGTCTGTCCATGCATCTCTCTCGGTCTCTGTTCGTGTTTGCATTGCGCTCATGTGTAGCACATGTGCCCGCATGTTTAACGGTGTTTAGTTAGTCTGTAACTGCTGACACTCAAAAACAAAATGCCAATAATCTTTTGTAGAACAAAACAAACTTTACTAGTTTAGAAAAATTTAAAAGGAGCAAAACCAAGTGTACTGAATTGGAATCATGGTTTATTATATATGTTTGGTATGTGTGCAGGCAGCAGACAAAGAAGAACCCTCAAGTGGTTGCATATGGTCTGATGGAGACTTATTTGTAAATGGCACTCAAAGTGGGCTGTTGGCTGCAACTGCTGAACACAACTTGTTTCATCCTTCACAACATTACTCTGCTTGGACAGTGGAACCTCCAACAGATTCTCTTAAACACATTCTCCAACATTGTACTGGATGCCAAAACATTCCAAGACCAACTGATCTTCCCTTGGTACCTTAGAAGATTATAGAACTTGTTGAATTGTAGTTTTGGTCAACTTTTATCTATTTTTCATTTTTGGTCCTTGAATTATAGTTTGACTTGAAGTTTTAAGATCTTGACTTCTTTGTCAAATCCACTTTTAGCCCCAATGTGAAAGTTGTTCTGCTGTTGGTGTGATATCAAAGGGTAACCTTCTTTATTATTTATAAATTGTATCCATGTTGTCACTTTTGCGTTAGGGGCTAAACGTGACATTCAGTCAAAGTTCAAGGGCTAAAATTGAAATTTTATACATCGTAATTTTTTATGTTACAACTATTCAGTGTACTTGTTTTCACTAGAACAAAGAAACAAACATATCCAATGTACTATTTGTAGGATTCAAACTCTATTGTAAGGTTATTAATTATGATGTACTACTATAGTCACTTGTGTCAATATTGAATAGACAACATTATGAAGCATGAGTTGTTATTTATTTATTGAAAAG

mRNA sequence

ATAAAAATTCACGATAGTAGTAGTAACTGCAATGTCAAATTTGTAATTGTAAAAATTAAATACAAATATTAAAATTAAACGCTAAAAGTTTTAATAGTTTATTCCAAATAATAAAAATCGAACTTTGTTACCATCTATAAGTTTTAAGAGTCTAAATTGGCATGAATTTGAAACTCAAATTTTTATAATTGAAAGTTTGATATGTTTCAACCTATGAAAATGTGGATAGATGAATTAAAATTCTAATACCTTGATCCCAACGCAAGGAAGAAGACGATGACCTTTTTCCAGAGAGGAGAAAGGTGTGCAATTCCTCCACCATAACCCACATTCTGTGTTTCACCTTAACAAATTTTACAGAGAAGCTTCGATCCGTAGCCATAGCTGTAAATTTACTGTTTCGGTTTGCCCATACAAATCCAATTAAATCCAAACGCTTTCTGTTAATGGGTAACGCCCATGGCCACCGCAAGCATTTCAACCATGGCGTAAATACCTCTCCACCCACTAATAACGCTCCTTCTCCCTTCAATAAATACTCCTCATCTGAACCCACTTCTCGAAATTCCACCTCCACCTCGAAGATGGCGTCCTTGCCCTACGCCCATGTTGATTCCAGCCTGCGAGCCCTTGCCGCTCAGGCTGAGGGCTTTGGCCGCTCTGCCATTGGTGGTCTCCATGGTTCTGTTTATTGTGTCACTAATTTAGCAGATGATGGTCCGGGATCACTTAGGTTTGGATGTCGTAAGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCGGGCACAATTCACTTGTCTACATATCTGAGTGTATCATCGTACAAGACTGTAGATGGTCGTGGTCAAAGGATAAAACTTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATCATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAATTCAAATTAAGCCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCCGAGGAAGCACGGATATCACTATTTCTAGGTGTCACTTCTCACAGCATGACAAGACAATGCTCATCGGAGCAGATCCCTCTCACATTGGCGACCGATGTATCCGTGTCACTATCCACCATTGTTTTTTCGACGGTACACGTCAACGGCATCCACGTGTTAGATATGCTCAAGTCCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGATTTACTCTCAGTGCAACATATATGAAGCAGGAGCGAAAAAGGTGGCGTTTAAATATCTAACTGAAAAGGCAGCAGACAAAGAAGAACCCTCAAGTGGTTGCATATGGTCTGATGGAGACTTATTTGTAAATGGCACTCAAAGTGGGCTGTTGGCTGCAACTGCTGAACACAACTTGTTTCATCCTTCACAACATTACTCTGCTTGGACAGTGGAACCTCCAACAGATTCTCTTAAACACATTCTCCAACATTGTACTGGATGCCAAAACATTCCAAGACCAACTGATCTTCCCTTGGTACCTTAGAAGATTATAGAACTTGTTGAATTGTAGTTTTGGTCAACTTTTATCTATTTTTCATTTTTGGTCCTTGAATTATAGTTTGACTTGAAGTTTTAAGATCTTGACTTCTTTGTCAAATCCACTTTTAGCCCCAATGTGAAAGTTGTTCTGCTGTTGGTGTGATATCAAAGGGTAACCTTCTTTATTATTTATAAATTGTATCCATGTTGTCACTTTTGCGTTAGGGGCTAAACGTGACATTCAGTCAAAGTTCAAGGGCTAAAATTGAAATTTTATACATCGTAATTTTTTATGTTACAACTATTCAGTGTACTTGTTTTCACTAGAACAAAGAAACAAACATATCCAATGTACTATTTGTAGGATTCAAACTCTATTGTAAGGTTATTAATTATGATGTACTACTATAGTCACTTGTGTCAATATTGAATAGACAACATTATGAAGCATGAGTTGTTATTTATTTATTGAAAAG

Coding sequence (CDS)

ATGGGTAACGCCCATGGCCACCGCAAGCATTTCAACCATGGCGTAAATACCTCTCCACCCACTAATAACGCTCCTTCTCCCTTCAATAAATACTCCTCATCTGAACCCACTTCTCGAAATTCCACCTCCACCTCGAAGATGGCGTCCTTGCCCTACGCCCATGTTGATTCCAGCCTGCGAGCCCTTGCCGCTCAGGCTGAGGGCTTTGGCCGCTCTGCCATTGGTGGTCTCCATGGTTCTGTTTATTGTGTCACTAATTTAGCAGATGATGGTCCGGGATCACTTAGGTTTGGATGTCGTAAGAAAGAGCCCCTTTGGATTATCTTTGAAGTTTCGGGCACAATTCACTTGTCTACATATCTGAGTGTATCATCGTACAAGACTGTAGATGGTCGTGGTCAAAGGATAAAACTTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATCATTTGCAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAATTCAAATTAAGCCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCCGAGGAAGCACGGATATCACTATTTCTAGGTGTCACTTCTCACAGCATGACAAGACAATGCTCATCGGAGCAGATCCCTCTCACATTGGCGACCGATGTATCCGTGTCACTATCCACCATTGTTTTTTCGACGGTACACGTCAACGGCATCCACGTGTTAGATATGCTCAAGTCCATCTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGTGTAGAATCACAGATTTACTCTCAGTGCAACATATATGAAGCAGGAGCGAAAAAGGTGGCGTTTAAATATCTAACTGAAAAGGCAGCAGACAAAGAAGAACCCTCAAGTGGTTGCATATGGTCTGATGGAGACTTATTTGTAAATGGCACTCAAAGTGGGCTGTTGGCTGCAACTGCTGAACACAACTTGTTTCATCCTTCACAACATTACTCTGCTTGGACAGTGGAACCTCCAACAGATTCTCTTAAACACATTCTCCAACATTGTACTGGATGCCAAAACATTCCAAGACCAACTGATCTTCCCTTGGTACCTTAG

Protein sequence

MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTYLSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHCTGCQNIPRPTDLPLVP

Homology

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BLAST of Clc04G08850 vs. NCBI nr
Match: XP_038883952.1 (probable pectate lyase 4 [Benincasa hispida])

HSP 1 Score: 743.4 bits (1918), Expect = 9.5e-211
Identity = 352/377 (93.37%), Postives = 361/377 (95.76%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGN HGHRKHFNH VN+SP T NA  P NKYS S+PT RNS+ST+KM SLPYAHVDSSLR
Sbjct: 1   MGNGHGHRKHFNHDVNSSPSTTNAHFPSNKYSPSQPTFRNSSSTTKMESLPYAHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           LSVSSYKT+DGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 LSVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITRGSTDITISRCHFS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSGCIWSDGDLFVNGTQSGLLAATA HN FHPS+HYS+WTVEPPTDSLK ILQH
Sbjct: 301 TDKEEPSSGCIWSDGDLFVNGTQSGLLAATAGHNFFHPSKHYSSWTVEPPTDSLKQILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQN+PRPTDLPLVP
Sbjct: 361 CTGCQNMPRPTDLPLVP 377

[Close]

BLAST of Clc04G08850 vs. NCBI nr
Match: XP_008447420.1 (PREDICTED: probable pectate lyase 4 [Cucumis melo] >KAA0047334.1 putative pectate lyase 4 [Cucumis melo var. makuwa])

HSP 1 Score: 726.1 bits (1873), Expect = 1.6e-205
Identity = 346/377 (91.78%), Postives = 358/377 (94.96%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN S PT NAP P NKYSSSEPTSRNS+S++ M SLPY HVDSSLR
Sbjct: 1   MGNAHGHRKHFNHGVNIS-PTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNL+DDGPGSLRFGCR KEPLWIIFEVSGTI LS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           +SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 VSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITRGSTDITISRC+FS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSG IWSDGDLFV GTQSGLLA TAEHN+FHPS+HY+ WTVEP TD+LKHILQH
Sbjct: 301 TDKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRPTD PLVP
Sbjct: 361 CTGCQNIPRPTDQPLVP 376

[Close]

BLAST of Clc04G08850 vs. NCBI nr
Match: XP_004142093.1 (probable pectate lyase 4 [Cucumis sativus] >KGN54214.1 hypothetical protein Csa_017940 [Cucumis sativus])

HSP 1 Score: 721.8 bits (1862), Expect = 2.9e-204
Identity = 345/377 (91.51%), Postives = 356/377 (94.43%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVNTS PT NAPSP NKYSSSEPTSRN +S++ M SLPY HVDSSLR
Sbjct: 1   MGNAHGHRKHFNHGVNTS-PTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCR KEPLWIIFEVSGTI LS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITR STDITISRC+FS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKE+PSSG IWSDGDLFV  TQSGLLA TAEH+LFHPS HYS+WTV+P TD+LKHILQH
Sbjct: 301 TDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRP D PLVP
Sbjct: 361 CTGCQNIPRPADQPLVP 376

[Close]

BLAST of Clc04G08850 vs. NCBI nr
Match: XP_022963206.1 (probable pectate lyase 4 [Cucurbita moschata])

HSP 1 Score: 696.4 bits (1796), Expect = 1.3e-196
Identity = 331/377 (87.80%), Postives = 351/377 (93.10%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN+SP T NA SP NKY+ S      STST++M SLPYA VDS LR
Sbjct: 1   MGNAHGHRKHFNHGVNSSPST-NAHSPSNKYAPSGSAPPISTSTAEMESLPYALVDSRLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALA QAEGFGR+AIGGLHGSVYCVTNL DDGPGSLRFGCR KEPLWIIFEVSGTIHLS+Y
Sbjct: 61  ALAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           L+VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWI
Sbjct: 121 LNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSL+DYDDGLIDITRGSTDITISRC FS+HDKTMLIGADPSH+GDRCIRVTIHHCFFD
Sbjct: 181 DRCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRY +VHLYNNYTRNWGIYAVCASVESQI+SQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSGCIWS+GDLFV+GTQSGLLAATA  ++FHPS HYSAWTVEPPTD+LK ILQH
Sbjct: 301 TDKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRP DLPLVP
Sbjct: 361 CTGCQNIPRPCDLPLVP 376

[Close]

BLAST of Clc04G08850 vs. NCBI nr
Match: XP_022972631.1 (probable pectate lyase 4 [Cucurbita maxima])

HSP 1 Score: 696.4 bits (1796), Expect = 1.3e-196
Identity = 330/377 (87.53%), Postives = 351/377 (93.10%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN+SP T NA SP NKY+ S      STST+KM SLPYA VDSSLR
Sbjct: 3   MGNAHGHRKHFNHGVNSSPST-NAHSPSNKYTPSGSAPPISTSTAKMESLPYALVDSSLR 62

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALA QAEGFGR++IGGLHGSVYCVTNL DDGPGSLRFGCR KEPLWIIFEVSGTIHLS+Y
Sbjct: 63  ALAGQAEGFGRASIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSY 122

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           L+VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWI
Sbjct: 123 LNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWI 182

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSL+DYDDGLIDITRGSTDIT+SRC FS+HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 183 DRCSLQDYDDGLIDITRGSTDITVSRCRFSRHDKTMLIGADPSHIGDRCIRVTIHHCFFD 242

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRY ++HLYNNYTRNWGIYAVCASVESQI+SQCNIYEAG KKVAFKYLTEKA
Sbjct: 243 GTRQRHPRVRYGKIHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKA 302

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSGCIWS+GDLFV+GTQSGLL ATA  ++FHPS HYSAWTVEPPTD+LK ILQH
Sbjct: 303 TDKEEPSSGCIWSEGDLFVSGTQSGLLPATAGQSMFHPSDHYSAWTVEPPTDALKQILQH 362

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRP DLPLVP
Sbjct: 363 CTGCQNIPRPCDLPLVP 378

[Close]

BLAST of Clc04G08850 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.5e-46
Identity = 107/276 (38.77%), Postives = 162/276 (58.70%), Query Frame = 0


Query: 60  RALAAQAEGFGRSAIGGLHGSVYCVTNLADD----GPGSLRFGCRKKEPLWIIFEVSGTI 119
           +ALA  A G+G++AIGG +G +Y VTN +D+     PG+LR+   + +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 120 HLSTYLSVSSYKTVDGRGQRIKL-TGKGLRLKECEHVIICNLEFEGGR----GHDVDGIQ 179
            L + L ++SYKT+DGRG ++++  G  LR+++ +HVII  +     +    G D DGI+
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 180 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCI 239
           +   S H+WID C L    DGLID+   ST +TIS  +F+QHDK ML+G D S++GD+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 232

Query: 240 RVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAK 299
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S    I+S+ N + A  K
Sbjct: 233 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 292

Query: 300 KVAFKYLTEKAADKEEPSSGCIWSDGDLFVNGTQSG 326
           + + K +T++     +       +  D+F+NG   G
Sbjct: 293 R-SSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG 326

[Close]

BLAST of Clc04G08850 vs. ExPASy Swiss-Prot
Match: Q9FM66 (Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.6e-46
Identity = 112/280 (40.00%), Postives = 151/280 (53.93%), Query Frame = 0


Query: 62  LAAQAEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRKKEPLWIIFEVSGTIH 121
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR+   + +PLWIIF+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 122 LSTYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLEFEG------------GRG 181
           L   L V+SYKT+DGRG  +++  G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 182 HDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPS 241
            D DGI I   S+ IWID C+L    DGLID   GSTDITIS  +   H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 242 HIGDRCIRVTIHHCFF-DGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCN 301
           + GDR +RVTI   +F +G  QR PR R+   H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 302 IYEAGAKKVAFKYLTEKAADKEEPSSGCIW-SDGDLFVNG 322
           ++ A   +   +    ++AD +E      W S+GD  VNG
Sbjct: 308 VFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNG 346

[Close]

BLAST of Clc04G08850 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-44
Identity = 136/382 (35.60%), Postives = 191/382 (50.00%), Query Frame = 0


Query: 10  HFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMAS----LPYAHVDSSLRALAAQ 69
           H    VN S       SP +  SSS  +S +S  T            A   ++ + LA  
Sbjct: 43  HVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADC 102

Query: 70  AEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRKKEPLWIIFEVSGTIHLSTY 129
           + GFG   +GG +G +Y VT+ +D+      PG+LR+G  ++EPLWI+F  +  I L   
Sbjct: 103 SIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQE 162

Query: 130 LSVSSYKTVDGRGQRIKLTGKG-LRLKECEHVIICNLE---------FEGGRGHDVDGIQ 189
           L ++SYKT+DGRG  + +TG G L L+  +H+II NL          FE     D DGI 
Sbjct: 163 LIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDGDGIS 222

Query: 190 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCI 249
           I   S+ IW+D CS+    DGLID   GST ITIS  +F+ HD+ ML+G D ++  D  +
Sbjct: 223 IF-GSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGM 282

Query: 250 RVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAK 309
           +VTI  + F  G  QR PR R   +H+ NN    W +YA+  S    I SQ N Y A + 
Sbjct: 283 QVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSD 342

Query: 310 KVAFKYLTEKAADKEEPS-SGCIW-SDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTV 369
             A K +T++   K++   S   W ++GDL  NG       A+ E      S +  A +V
Sbjct: 343 PSA-KEVTKRVDSKDDGEWSNWNWRTEGDLMENG---AFFVASGEG---MSSMYSKASSV 402

[Close]

BLAST of Clc04G08850 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 6.7e-42
Identity = 101/254 (39.76%), Postives = 144/254 (56.69%), Query Frame = 0


Query: 57  SSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADD----GPGSLRFGCRKKEPLWIIFEVS 116
           S+ RALA  A GFG+SA+GG +GS+Y VTN +DD     PG+LR+   + +PLWI F   
Sbjct: 51  SNRRALADCAVGFGKSAVGGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWITFARD 110

Query: 117 GTIHLSTYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLEF------EGGR--- 176
             I L   L ++SYKT+DGRG ++++  G  + ++   HVII  +        + GR   
Sbjct: 111 MVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRS 170

Query: 177 ---------GHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHD 236
                    G D D I I  +S HIWID C      DGLID+   ST +TIS  +F+QHD
Sbjct: 171 SPTHVGSRKGSDGDAIAIF-DSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHD 230

Query: 237 KTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCAS 287
           K ML+G + +++ D+ +RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S
Sbjct: 231 KVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGS 290

[Close]

BLAST of Clc04G08850 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 8.7e-42
Identity = 109/297 (36.70%), Postives = 157/297 (52.86%), Query Frame = 0


Query: 56  DSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRKKEPLWIIFE 115
           +++ + LA  A GFG++AIGG  G +Y VT+ A+D      PG+LR+   ++EPLWIIF+
Sbjct: 77  ETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFK 136

Query: 116 VSGTIHLSTYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLE-----------F 175
               I L   L ++S+KT+DGRG  + +T G  L++    ++II  +             
Sbjct: 137 RDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMI 196

Query: 176 EGGRGH-------DVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQ 235
           + G  H       D D + I    KH+WID CSL + DDGLID   GST ITIS  H + 
Sbjct: 197 KDGPHHTGWWMQSDGDAVAIF-GGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTH 256

Query: 236 HDKTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVC 295
           HDK ML+G   S+  D+ ++VTI  + F +G  QR PR R+   H+ NN   +W +YA+ 
Sbjct: 257 HDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 316

Query: 296 ASVESQIYSQCNIYEAGAKKVAFKYLTEKAADKEEPSSGCIW------SDGDLFVNG 322
            S    IYSQ N + A   +        K   K E +    W      S+GD+ +NG
Sbjct: 317 GSASPTIYSQGNRFLAPNTRF------NKEVTKHEDAPESKWRDWNWRSEGDMLLNG 366

[Close]

BLAST of Clc04G08850 vs. ExPASy TrEMBL
Match: A0A5A7TWJ1 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550 PE=3 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 7.6e-206
Identity = 346/377 (91.78%), Postives = 358/377 (94.96%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN S PT NAP P NKYSSSEPTSRNS+S++ M SLPY HVDSSLR
Sbjct: 1   MGNAHGHRKHFNHGVNIS-PTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNL+DDGPGSLRFGCR KEPLWIIFEVSGTI LS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           +SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 VSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITRGSTDITISRC+FS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSG IWSDGDLFV GTQSGLLA TAEHN+FHPS+HY+ WTVEP TD+LKHILQH
Sbjct: 301 TDKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRPTD PLVP
Sbjct: 361 CTGCQNIPRPTDQPLVP 376

[Close]

BLAST of Clc04G08850 vs. ExPASy TrEMBL
Match: A0A1S3BGV0 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 7.6e-206
Identity = 346/377 (91.78%), Postives = 358/377 (94.96%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN S PT NAP P NKYSSSEPTSRNS+S++ M SLPY HVDSSLR
Sbjct: 1   MGNAHGHRKHFNHGVNIS-PTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNL+DDGPGSLRFGCR KEPLWIIFEVSGTI LS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           +SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 VSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITRGSTDITISRC+FS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSG IWSDGDLFV GTQSGLLA TAEHN+FHPS+HY+ WTVEP TD+LKHILQH
Sbjct: 301 TDKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRPTD PLVP
Sbjct: 361 CTGCQNIPRPTDQPLVP 376

[Close]

BLAST of Clc04G08850 vs. ExPASy TrEMBL
Match: A0A0A0KZG2 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_4G293240 PE=3 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.4e-204
Identity = 345/377 (91.51%), Postives = 356/377 (94.43%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVNTS PT NAPSP NKYSSSEPTSRN +S++ M SLPY HVDSSLR
Sbjct: 1   MGNAHGHRKHFNHGVNTS-PTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCR KEPLWIIFEVSGTI LS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITR STDITISRC+FS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKE+PSSG IWSDGDLFV  TQSGLLA TAEH+LFHPS HYS+WTV+P TD+LKHILQH
Sbjct: 301 TDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRP D PLVP
Sbjct: 361 CTGCQNIPRPADQPLVP 376

[Close]

BLAST of Clc04G08850 vs. ExPASy TrEMBL
Match: A0A6J1I6H5 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111471167 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.4e-197
Identity = 330/377 (87.53%), Postives = 351/377 (93.10%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN+SP T NA SP NKY+ S      STST+KM SLPYA VDSSLR
Sbjct: 3   MGNAHGHRKHFNHGVNSSPST-NAHSPSNKYTPSGSAPPISTSTAKMESLPYALVDSSLR 62

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALA QAEGFGR++IGGLHGSVYCVTNL DDGPGSLRFGCR KEPLWIIFEVSGTIHLS+Y
Sbjct: 63  ALAGQAEGFGRASIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSY 122

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           L+VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWI
Sbjct: 123 LNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWI 182

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSL+DYDDGLIDITRGSTDIT+SRC FS+HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 183 DRCSLQDYDDGLIDITRGSTDITVSRCRFSRHDKTMLIGADPSHIGDRCIRVTIHHCFFD 242

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRY ++HLYNNYTRNWGIYAVCASVESQI+SQCNIYEAG KKVAFKYLTEKA
Sbjct: 243 GTRQRHPRVRYGKIHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKA 302

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSGCIWS+GDLFV+GTQSGLL ATA  ++FHPS HYSAWTVEPPTD+LK ILQH
Sbjct: 303 TDKEEPSSGCIWSEGDLFVSGTQSGLLPATAGQSMFHPSDHYSAWTVEPPTDALKQILQH 362

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRP DLPLVP
Sbjct: 363 CTGCQNIPRPCDLPLVP 378

[Close]

BLAST of Clc04G08850 vs. ExPASy TrEMBL
Match: A0A6J1HFI4 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.4e-197
Identity = 331/377 (87.80%), Postives = 351/377 (93.10%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPPTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVDSSLR 60
           MGNAHGHRKHFNHGVN+SP T NA SP NKY+ S      STST++M SLPYA VDS LR
Sbjct: 1   MGNAHGHRKHFNHGVNSSPST-NAHSPSNKYAPSGSAPPISTSTAEMESLPYALVDSRLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTY 120
           ALA QAEGFGR+AIGGLHGSVYCVTNL DDGPGSLRFGCR KEPLWIIFEVSGTIHLS+Y
Sbjct: 61  ALAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           L+VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWI
Sbjct: 121 LNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSL+DYDDGLIDITRGSTDITISRC FS+HDKTMLIGADPSH+GDRCIRVTIHHCFFD
Sbjct: 181 DRCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKA 300
           GTRQRHPRVRY +VHLYNNYTRNWGIYAVCASVESQI+SQCNIYEAG KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKA 300

Query: 301 ADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
            DKEEPSSGCIWS+GDLFV+GTQSGLLAATA  ++FHPS HYSAWTVEPPTD+LK ILQH
Sbjct: 301 TDKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQH 360

Query: 361 CTGCQNIPRPTDLPLVP 378
           CTGCQNIPRP DLPLVP
Sbjct: 361 CTGCQNIPRPCDLPLVP 376

[Close]

BLAST of Clc04G08850 vs. TAIR 10
Match: AT3G55140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 544.7 bits (1402), Expect = 6.0e-155
Identity = 246/326 (75.46%), Postives = 287/326 (88.04%), Query Frame = 0


Query: 47  MASLPYAHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLW 106
           M SLPYA  D SLRALA +AEGFGR A+GGLHG +Y VT+LADDGPG+LR G R+KEPLW
Sbjct: 1   MTSLPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGTLREGGRRKEPLW 60

Query: 107 IIFEVSGTIHLSTYLSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDV 166
           I+F VSGTI+L++YLSVSSYKT+DGRGQRIKLTGKG+RLKECEH+IICNLEFEGGRGHDV
Sbjct: 61  IVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDV 120

Query: 167 DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIG 226
           DGIQIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SRC+F+QHDKTMLIGADPSH+ 
Sbjct: 121 DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHVE 180

Query: 227 DRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 286
           DRCIRVTIHHCFFDGTRQR PR+R+ +VHLYNNYTRNWGIYAVCASVE+Q++SQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA 240

Query: 287 GAKKVAFKYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWT 346
           G KK  F+Y +EKAADKEE  +G + S+ DLF+NG Q  L+   +E  +FHPS+HY  WT
Sbjct: 241 GVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSLMTGASEECVFHPSEHYPTWT 300

Query: 347 VEPPTDSLKHILQHCTGCQNIPRPTD 373
           VEPP+++LK I+Q CTG Q++ RP+D
Sbjct: 301 VEPPSETLKQIMQICTGWQSLSRPSD 326

[Close]

BLAST of Clc04G08850 vs. TAIR 10
Match: AT3G09540.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 500.7 bits (1288), Expect = 1.0e-141
Identity = 247/378 (65.34%), Postives = 298/378 (78.84%), Query Frame = 0


Query: 1   MGNAHG-HRKHFNHGVNTSP---PTNNAPSPFNKYSSSEPTSRNSTSTSKMASLPYAHVD 60
           MGN HG HR H  HG +  P   P +  P P+    +  P + +S S   M   PY HVD
Sbjct: 1   MGNLHGIHRSH--HGGSNFPGEAPNSPFPPPYTAAPAPAP-APSSPSDHHMTVGPYCHVD 60

Query: 61  SSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIH 120
           SSLR+LA +AEGFGR+A+GGL+G +  VT+LAD+GPGSLR  C++ EPLWI+F+VSGTI+
Sbjct: 61  SSLRSLAGKAEGFGRAAVGGLNGPICHVTSLADEGPGSLREACKRPEPLWIVFDVSGTIN 120

Query: 121 LSTYLSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSK 180
           LS++++VSS+ TVDGRGQ++K+TGKGLRLKECE+VIICNLEFEGG G D D IQIKP S 
Sbjct: 121 LSSFVNVSSHTTVDGRGQKVKITGKGLRLKECENVIICNLEFEGGVGPDADAIQIKPKSH 180

Query: 181 HIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCIRVTIHH 240
           +IWIDRCSL++Y DGLIDITR STDIT+SRCHF  H+KTMLIGAD SH+ DRCIRVTIHH
Sbjct: 181 NIWIDRCSLKNYYDGLIDITRESTDITVSRCHFMNHNKTMLIGADTSHVTDRCIRVTIHH 240

Query: 241 CFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAKKVAFKYL 300
           CFFDGTRQRHPRVR+A+VHL+NNYTR+W IYAV A VESQI+SQCNIYEAG KK  FKY+
Sbjct: 241 CFFDGTRQRHPRVRFAKVHLFNNYTRHWAIYAVGAGVESQIHSQCNIYEAGEKKTVFKYI 300

Query: 301 TEKAADKEEPSSGCIWSDGDLFVNGTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKH 360
           TEKAADKE+P +G + S+GDL +NG +S  L+   E  +F P QHYS WTVE PTD LK+
Sbjct: 301 TEKAADKEKPGAGFVRSEGDLLLNGAKS-CLSQGGERYVFSPIQHYSEWTVESPTDILKN 360

Query: 361 ILQHCTGCQNIPRPTDLP 375
            L+H TG QN+P P D P
Sbjct: 361 YLKHSTGWQNLPLPLDRP 374

[Close]

BLAST of Clc04G08850 vs. TAIR 10
Match: AT3G55140.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 487.3 bits (1253), Expect = 1.1e-137
Identity = 216/286 (75.52%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 87  LADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSTYLSVSSYKTVDGRGQRIKLTGKGLRLK 146
           + DDGPG+LR G R+KEPLWI+F VSGTI+L++YLSVSSYKT+DGRGQRIKLTGKG+RLK
Sbjct: 17  ILDDGPGTLREGGRRKEPLWIVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLK 76

Query: 147 ECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISR 206
           ECEH+IICNLEFEGGRGHDVDGIQIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SR
Sbjct: 77  ECEHIIICNLEFEGGRGHDVDGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSR 136

Query: 207 CHFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGI 266
           C+F+QHDKTMLIGADPSH+ DRCIRVTIHHCFFDGTRQR PR+R+ +VHLYNNYTRNWGI
Sbjct: 137 CYFAQHDKTMLIGADPSHVEDRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGI 196

Query: 267 YAVCASVESQIYSQCNIYEAGAKKVAFKYLTEKAADKEEPSSGCIWSDGDLFVNGTQSGL 326
           YAVCASVE+Q++SQCNIYEAG KK  F+Y +EKAADKEE  +G + S+ DLF+NG Q  L
Sbjct: 197 YAVCASVEAQVFSQCNIYEAGVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSL 256

Query: 327 LAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHCTGCQNIPRPTD 373
           +   +E  +FHPS+HY  WTVEPP+++LK I+Q CTG Q++ RP+D
Sbjct: 257 MTGASEECVFHPSEHYPTWTVEPPSETLKQIMQICTGWQSLSRPSD 302

[Close]

BLAST of Clc04G08850 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 3.2e-47
Identity = 107/276 (38.77%), Postives = 162/276 (58.70%), Query Frame = 0


Query: 60  RALAAQAEGFGRSAIGGLHGSVYCVTNLADD----GPGSLRFGCRKKEPLWIIFEVSGTI 119
           +ALA  A G+G++AIGG +G +Y VTN +D+     PG+LR+   + +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 120 HLSTYLSVSSYKTVDGRGQRIKL-TGKGLRLKECEHVIICNLEFEGGR----GHDVDGIQ 179
            L + L ++SYKT+DGRG ++++  G  LR+++ +HVII  +     +    G D DGI+
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 180 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPSHIGDRCI 239
           +   S H+WID C L    DGLID+   ST +TIS  +F+QHDK ML+G D S++GD+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 232

Query: 240 RVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGAK 299
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S    I+S+ N + A  K
Sbjct: 233 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 292

Query: 300 KVAFKYLTEKAADKEEPSSGCIWSDGDLFVNGTQSG 326
           + + K +T++     +       +  D+F+NG   G
Sbjct: 293 R-SSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG 326

[Close]

BLAST of Clc04G08850 vs. TAIR 10
Match: AT5G55720.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 5.4e-47
Identity = 112/280 (40.00%), Postives = 151/280 (53.93%), Query Frame = 0


Query: 62  LAAQAEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRKKEPLWIIFEVSGTIH 121
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR+   + +PLWIIF+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 122 LSTYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLEFEG------------GRG 181
           L   L V+SYKT+DGRG  +++  G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 182 HDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGADPS 241
            D DGI I   S+ IWID C+L    DGLID   GSTDITIS  +   H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 242 HIGDRCIRVTIHHCFF-DGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCN 301
           + GDR +RVTI   +F +G  QR PR R+   H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 302 IYEAGAKKVAFKYLTEKAADKEEPSSGCIW-SDGDLFVNG 322
           ++ A   +   +    ++AD +E      W S+GD  VNG
Sbjct: 308 VFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNG 346

The following BLAST results are available for this feature:

BLAST of Clc04G08850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883952.1	9.5e-211	93.37	probable pectate lyase 4 [Benincasa hispida]	[more]
XP_008447420.1	1.6e-205	91.78	PREDICTED: probable pectate lyase 4 [Cucumis melo] >KAA0047334.1 putative pectat...	[more]
XP_004142093.1	2.9e-204	91.51	probable pectate lyase 4 [Cucumis sativus] >KGN54214.1 hypothetical protein Csa_...	[more]
XP_022963206.1	1.3e-196	87.80	probable pectate lyase 4 [Cucurbita moschata]	[more]
XP_022972631.1	1.3e-196	87.53	probable pectate lyase 4 [Cucurbita maxima]	[more]

BLAST of Clc04G08850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8G4	4.5e-46	38.77	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
Q9FM66	7.6e-46	40.00	Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1	[more]
Q93Z04	4.2e-44	35.60	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
O65388	6.7e-42	39.76	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
Q9LTZ0	8.7e-42	36.70	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]

BLAST of Clc04G08850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWJ1	7.6e-206	91.78	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550...	[more]
A0A1S3BGV0	7.6e-206	91.78	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1	[more]
A0A0A0KZG2	1.4e-204	91.51	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_4G293240 PE=3 SV=1	[more]
A0A6J1I6H5	6.4e-197	87.53	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111471167 PE=3 SV=1	[more]
A0A6J1HFI4	6.4e-197	87.80	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1	[more]

BLAST of Clc04G08850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55140.1	6.0e-155	75.46	Pectin lyase-like superfamily protein	[more]
AT3G09540.1	1.0e-141	65.34	Pectin lyase-like superfamily protein	[more]
AT3G55140.2	1.1e-137	75.52	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	3.2e-47	38.77	Pectin lyase-like superfamily protein	[more]
AT5G55720.1	5.4e-47	40.00	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 120..136 score: 49.58 coord: 65..82 score: 49.74 coord: 267..286 score: 38.57
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 77..290 e-value: 5.1E-35 score: 132.3
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 121..283 e-value: 7.1E-26 score: 91.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 50..358 e-value: 1.2E-91 score: 309.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR31683:SF113	PECTATE LYASE	coord: 44..370
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 44..370
IPR003308	Integrase, N-terminal zinc-binding domain	PROSITE	PS50876	ZF_INTEGRASE	coord: 324..365 score: 8.896386
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 65..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G08850.1	Clc04G08850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0008270	zinc ion binding