Clc04G07510 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G07510
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	ClcChr04: 21232519 .. 21235628 (-)
RNA-Seq Expression	Clc04G07510
Synteny	Clc04G07510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCATGTTAACATAACACATTGTTTAAAATTTATAAAATATTTATTTACTCATTTAATGTATTTTTTAAAATATTTTGTTGTTAAAATTTTTACAAAAATATACATCGACATTTATATTTTAAGATCATTTTTATTGAAATTTTCGTAAAATTATGATCTCGATTTTGATATTTTAAACCTGGATTAAAATTAAAACCTACTAATTGGGGGTTTCTATATATATAATTTACTAATTGGGGGTTCTTATATATATAATTTACTAATTTATTAAAAACTCAAAGATTTTCCCCATGTGAGACCTCAACCACAAACTTCGCAAACAAAATCGAGTGAACGACGACGCTTTGACCCCACCGTTCCAGTACGACGGGATAAGGCAGAGATAAGGCCAAGACGCACAGAAGCCGTCAGATGGATTCGTCCCATAATCCAACGGACACAAAACCACCACAACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTCAACCACATAATAACCCAACCAAAATCCCTACTTCCATCTCACACTCTTCAATTCCTCTCTCAACTCCTCGTCGTCGTCGTCGTCGTAATGGCCACCGCTGCCGCAACCTCTTCCTTCATCGGAACACGCCTCGCCGAATTACGGCCGAGTTCCGGTCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAGAAGACTCCGGCGAAGAAATCGCCGTCGTCGAAGACAATATCCAACCGGCCGTTGTGGTTTCCGGGAGCAAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGGGACTACGGATTCGATCCGTTCGGGTTGGGGAAACCGGCAGAATATTTGCAGTATGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATTATCGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACCCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGCGAGTGCGAGCTGATCCATGGAAGGTGGGCAATGCTTGCCACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAAAGTGAGTTATTCTTTTTTCATTTATATATATATAGATTTCGTTTCAATTAAGAAATACTTAATTAAATTACAAATTTAGCACCACTTTTAATTGTGTTGCAAATAATTTTAAATACAAAATATTAAAAAAAAAACTCAATTTCATAACCATTTTGTATTTTATTTTTATTCTTTTAATTGAATGTATATTTTGTTTTATTACTCACTTATCACTAGCCAACATTTGAAAATTAAAGTAAATCATTTTTAAAAATGTATTTTATAAATACAAAATAGTTAGACTCAATTAGTTATATTTGAAATGACCATTTTCAAGAGTACATTTTCTATTAATAAGGATTCACAATGAGAAAGATTAGCAAAATAACAGTGAATACTGAATTAGAAGAGAAATAAGGGCCCGTTTGGATTGACTAAAGGAAGAAAAAAAGTATTTTTTTAAAAATTTATTTTTGTTTAAATTCTTTTGATAAAAATTATTTAAAATAAACTTCAAAATTTTTTGTTGAGTGGTTGTCAAATACTCAAAAATAATTTCAAAATGACTTATTTTTTTAAATTAAACACTCGAAAATGTATTCTAAACATACTTTTAAGTCTCTTGCATTATATTTAGTTGTGGCGGCTCACCCTATTTAAAGAAATCATTTTTTCTTTTCTTTTTGTTTCTTAATATATATATTCTTTGAGATTATCAATTTTGTAACAATTCAATATCTACACTTTAATGTGAAAGAACATAGTCTTATACTTTAAGTTTTGTAACAATCTAGTCGTAAAAATATTATTATGATTTAATGAAAATTCTTTTACATATACACCTGTAAACTAGTTATGGATCAGATATTATAACCATTAAAGCTTAGGTCACTATACAATAATAACTGACATTTAATTTTTCTTTTAGAAAAATGAAATGATTGGATTTTTCATAGTAGGATTAAATTGTTCATATTTTGGAAGAATATGAATAAATTTGTTTCCTTGCTTAGGGACTAAACTACTAAAAATATAATAACTCAATAATGTAATAATCTCAAAATTAAGGTCCAATGATAATTAACTAAATCGGAAAGAATGTTTGGTTAAATTACAATATTAGTTGTTAAATTTTTAAATTTGTATCTATTTAGTCCATAAATTTTGAAATATCTAAAAGACCCATAGACTTTCAATTTTGTTTTCAATAGATCAAAACGTTAAAAACGTGTCTAATAAGTCTTTGGGTTTTCATTCTTTTGACTAAGAGGTATTTTTTAAAAAACTTTAAACTAAAAGCTTAATATTAAATATGTAAAAAAACGTATTAAACACATAATTAAAGGAAGGTGGGAAGGTTGAAGTTTAGGTGGAAAATCTGAATTTGAAGTTCATAAACCTTCTAAACACAAACTTGAAAAATTAATGATGGGATGAGGTAAAAATTTCAGGTAGAACTAGTGGAAGGTTCATCCTACCTAGGGCAGCCACTTCCCTTCTCCCTCACCACGCTGATTTGGATCGAAGTTCTAGTGATCGGTTACATCGAGTTTCAAAGGAATGCGGAGTTAGACCCAGAGAAGAGGTTGTATCCAGGAGGCAAGTATTTCGACCCCTTGGGCTTAGCCGAGGACCCCGAAAAGAAAGCCGTCCTACAGTTGGCCGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTTGGGTTCGCAGTTCAGGCTGCTGTTACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTCTTCTTCTTAAGCTCCTCTTTATTTTCCTCCACTACTTTGTGTTCATTATTGTCTTCTCTCTAGTTTGTAAAAAAAGAACTTGACCTTGTAATGTCATCCTGAGCTGTAACTACTTTGCTTCGAGATTCGTATCTGAAATTATATATCCTGCTCCCCACACAAATCAAAACTGTTATTAGTTTAGTTTCCAAACTCTGTTCATTCTTTTTTTAATCATTATTAAGGTGATTCTATATTGCTTAA

mRNA sequence

ATGAGCATACCTCAACCACAAACTTCGCAAACAAAATCGAGTGAACGACGACGCTTTGACCCCACCGTTCCAGTACGACGGGATAAGGCAGAGATAAGGCCAAGACGCACAGAAGCCGTCAGATGGATTCGTCCCATAATCCAACGGACACAAAACCACCACAACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTCAACCACATAATAACCCAACCAAAATCCCTACTTCCATCTCACACTCTTCAATTCCTCTCTCAACTCCTCGTCGTCGTCGTCGTCGTAATGGCCACCGCTGCCGCAACCTCTTCCTTCATCGGAACACGCCTCGCCGAATTACGGCCGAGTTCCGGTCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAGAAGACTCCGGCGAAGAAATCGCCGTCGTCGAAGACAATATCCAACCGGCCGTTGTGGTTTCCGGGAGCAAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGGGACTACGGATTCGATCCGTTCGGGTTGGGGAAACCGGCAGAATATTTGCAGTATGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATTATCGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACCCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGCGAGTGCGAGCTGATCCATGGAAGGTGGGCAATGCTTGCCACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAAAGTAGAACTAGTGGAAGGTTCATCCTACCTAGGGCAGCCACTTCCCTTCTCCCTCACCACGCTGATTTGGATCGAAGTTCTAGTGATCGGTTACATCGAGTTTCAAAGGAATGCGGAGTTAGACCCAGAGAAGAGGTTGTATCCAGGAGGCAAGTATTTCGACCCCTTGGGCTTAGCCGAGGACCCCGAAAAGAAAGCCGTCCTACAGTTGGCCGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTTGGGTTCGCAGTTCAGGCTGCTGTTACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTCTTCTTCTTAAGCTCCTCTTTATTTTCCTCCACTACTTTGTGTTCATTATTGTCTTCTCTCTAGTTTGTAAAAAAAGAACTTGACCTTGTAATGTCATCCTGAGCTGTAACTACTTTGCTTCGAGATTCGTATCTGAAATTATATATCCTGCTCCCCACACAAATCAAAACTGTTATTAGTTTAGTTTCCAAACTCTGTTCATTCTTTTTTTAATCATTATTAAGGTGATTCTATATTGCTTAA

Coding sequence (CDS)

ATGAGCATACCTCAACCACAAACTTCGCAAACAAAATCGAGTGAACGACGACGCTTTGACCCCACCGTTCCAGTACGACGGGATAAGGCAGAGATAAGGCCAAGACGCACAGAAGCCGTCAGATGGATTCGTCCCATAATCCAACGGACACAAAACCACCACAACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTCAACCACATAATAACCCAACCAAAATCCCTACTTCCATCTCACACTCTTCAATTCCTCTCTCAACTCCTCGTCGTCGTCGTCGTCGTAATGGCCACCGCTGCCGCAACCTCTTCCTTCATCGGAACACGCCTCGCCGAATTACGGCCGAGTTCCGGTCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAGAAGACTCCGGCGAAGAAATCGCCGTCGTCGAAGACAATATCCAACCGGCCGTTGTGGTTTCCGGGAGCAAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGGGACTACGGATTCGATCCGTTCGGGTTGGGGAAACCGGCAGAATATTTGCAGTATGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATTATCGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACCCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGCGAGTGCGAGCTGATCCATGGAAGGTGGGCAATGCTTGCCACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAAAGTAGAACTAGTGGAAGGTTCATCCTACCTAGGGCAGCCACTTCCCTTCTCCCTCACCACGCTGATTTGGATCGAAGTTCTAGTGATCGGTTACATCGAGTTTCAAAGGAATGCGGAGTTAGACCCAGAGAAGAGGTTGTATCCAGGAGGCAAGTATTTCGACCCCTTGGGCTTAGCCGAGGACCCCGAAAAGAAAGCCGTCCTACAGTTGGCCGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTTGGGTTCGCAGTTCAGGCTGCTGTTACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTCTTCTTCTTAA

Protein sequence

MSIPQPQTSQTKSSERRRFDPTVPVRRDKAEIRPRRTEAVRWIRPIIQRTQNHHNRLCGNRRSQFPFLNHIITQPKSLLPSHTLQFLSQLLVVVVVVMATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSSSS

Homology

[Close]

BLAST of Clc04G07510 vs. NCBI nr
Match: XP_038882769.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 566.2 bits (1458), Expect = 2.1e-157
Identity = 277/284 (97.54%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 98  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 157
           MATAAATSSFIGTRLAELRP SGRVQARFGFGKKK+P KKSPSSKTIS+RPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAELRPCSGRVQARFGFGKKKSPPKKSPSSKTISDRPLWFPGAKAP 60

Query: 158 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 217
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 218 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 277
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 278 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 337
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKK VLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKH 240

Query: 338 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Clc04G07510 vs. NCBI nr
Match: XP_008449241.1 (PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo] >KAA0045037.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa] >TYJ96289.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa])

HSP 1 Score: 563.9 bits (1452), Expect = 1.0e-156
Identity = 277/284 (97.54%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 98  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 157
           MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 158 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 217
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 218 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 277
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 278 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 337
           FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 338 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Clc04G07510 vs. NCBI nr
Match: XP_004147887.1 (chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN54365.1 hypothetical protein Csa_017948 [Cucumis sativus])

HSP 1 Score: 563.1 bits (1450), Expect = 1.8e-156
Identity = 275/284 (96.83%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 98  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 157
           MATAAATSSF+GTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAP
Sbjct: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60

Query: 158 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 217
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 218 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 277
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 278 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 337
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 338 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Clc04G07510 vs. NCBI nr
Match: XP_022978220.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 556.2 bits (1432), Expect = 2.2e-154
Identity = 271/283 (95.76%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 99  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPE 158
           ATAAATSSFIGTRL ++RPSSGRVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 159 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 218
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+A+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQP 123

Query: 219 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 278
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 279 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHA 338
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 339 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of Clc04G07510 vs. NCBI nr
Match: XP_022950626.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 555.1 bits (1429), Expect = 4.9e-154
Identity = 271/283 (95.76%), Postives = 279/283 (98.59%), Query Frame = 0


Query: 99  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPE 158
           ATAAATSSFIGTRL ++RPSS RVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 159 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 218
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESA+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQP 123

Query: 219 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 278
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 279 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHA 338
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 339 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of Clc04G07510 vs. ExPASy Swiss-Prot
Match: Q07473 (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 4.3e-137
Identity = 237/285 (83.16%), Postives = 257/285 (90.18%), Query Frame = 0


Query: 99  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 158
           A AAA SS +GTR+A  + P SGR  A FGFGKKK   KKS      ++RPLW+PGA +P
Sbjct: 6   AAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISP 65

Query: 159 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 218
           +WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+A+ KSTPFQ
Sbjct: 66  DWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQ 125

Query: 219 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 278
           PY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 126 PYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLP 185

Query: 279 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 338
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKH
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKH 245

Query: 339 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 383
           ARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Sbjct: 246 ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290

[Close]

BLAST of Clc04G07510 vs. ExPASy Swiss-Prot
Match: Q9XF88 (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.2e-133
Identity = 233/285 (81.75%), Postives = 258/285 (90.53%), Query Frame = 0


Query: 99  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 158
           +TAAA SS +GTR ++++  +S R  ARFGFG KK   KK+ +   IS+RPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPGAKSP 64

Query: 159 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 218
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 219 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 278
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLP 184

Query: 279 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 338
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKH
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKH 244

Query: 339 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 383
           ARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Sbjct: 245 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287

[Close]

BLAST of Clc04G07510 vs. ExPASy Swiss-Prot
Match: Q9S7W1 (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.3 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 6.7e-114
Identity = 206/270 (76.30%), Postives = 228/270 (84.44%), Query Frame = 0


Query: 100 TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAK 159
           TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   +R +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 160 APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 219
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 220 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 279
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQP
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQP 184

Query: 280 LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEI 339
           LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG YFDPLGLA DPEK   L+LAEI
Sbjct: 185 LPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEI 244

Query: 340 KHARLAMVAFLGFAVQAAVTGKGPLNNWAT 366
           KH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 245 KHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of Clc04G07510 vs. ExPASy Swiss-Prot
Match: Q93WD2 (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhcb4 PE=1 SV=3)

HSP 1 Score: 249.2 bits (635), Expect = 7.5e-65
Identity = 131/225 (58.22%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 149 LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES 208
           LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSV------E 111

Query: 209 AEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDA 268
           A V++TP          PY+EVFGL RFRECELIHGRWAMLA LGAL  E  TGV+W +A
Sbjct: 112 AIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEA 171

Query: 269 GKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGL 328
           GKVEL +G+SY G  LPFS+T LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL L
Sbjct: 172 GKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKL 231

Query: 329 AEDPEKKAV-LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA 365
           A + E++A  L+ AEIKHARLAMV+F G+ VQA  TG+G L + A
Sbjct: 232 ASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA 268

[Close]

BLAST of Clc04G07510 vs. ExPASy Swiss-Prot
Match: Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-38
Identity = 98/233 (42.06%), Postives = 128/233 (54.94%), Query Frame = 0


Query: 150 WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFES 209
           W PG   P +LDGS  GD+GFDP GLG+ PA                             
Sbjct: 48  WMPGEPRPAYLDGSAPGDFGFDPLGLGEVPA----------------------------- 107

Query: 210 AEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEG 269
                           L+R++E ELIH RWAMLA  G L  E L    W  A +   + G
Sbjct: 108 ---------------NLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPG 167

Query: 270 --SSYLGQPLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPE 329
             ++YLG P+P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+
Sbjct: 168 GQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPK 227

Query: 330 KKAVLQLAEIKHARLAMVAFLGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID 378
           K   L++ EIK+ RLA++AF+GF V Q+A  G GPL N ATHL+DP H  I D
Sbjct: 228 KLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 235

[Close]

BLAST of Clc04G07510 vs. ExPASy TrEMBL
Match: A0A5D3BBB3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00840 PE=3 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 5.1e-157
Identity = 277/284 (97.54%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 98  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 157
           MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 158 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 217
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 218 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 277
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 278 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 337
           FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 338 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Clc04G07510 vs. ExPASy TrEMBL
Match: A0A1S3BMH8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491174 PE=3 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 5.1e-157
Identity = 277/284 (97.54%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 98  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 157
           MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 158 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 217
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 218 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 277
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 278 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 337
           FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 338 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Clc04G07510 vs. ExPASy TrEMBL
Match: A0A0A0KXI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_4G308550 PE=3 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 8.6e-157
Identity = 275/284 (96.83%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 98  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 157
           MATAAATSSF+GTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAP
Sbjct: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60

Query: 158 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 217
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 218 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 277
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 278 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 337
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 338 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Clc04G07510 vs. ExPASy TrEMBL
Match: A0A6J1IPG0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478268 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 1.1e-154
Identity = 271/283 (95.76%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 99  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPE 158
           ATAAATSSFIGTRL ++RPSSGRVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 159 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 218
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+A+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQP 123

Query: 219 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 278
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 279 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHA 338
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 339 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of Clc04G07510 vs. ExPASy TrEMBL
Match: A0A6J1GFC4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453669 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.4e-154
Identity = 271/283 (95.76%), Postives = 279/283 (98.59%), Query Frame = 0


Query: 99  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPE 158
           ATAAATSSFIGTRL ++RPSS RVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 159 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 218
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESA+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQP 123

Query: 219 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 278
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 279 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHA 338
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 339 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 382
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of Clc04G07510 vs. TAIR 10
Match: AT5G01530.1 (light harvesting complex photosystem II )

HSP 1 Score: 489.2 bits (1258), Expect = 3.1e-138
Identity = 237/285 (83.16%), Postives = 257/285 (90.18%), Query Frame = 0


Query: 99  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 158
           A AAA SS +GTR+A  + P SGR  A FGFGKKK   KKS      ++RPLW+PGA +P
Sbjct: 6   AAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISP 65

Query: 159 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 218
           +WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+A+ KSTPFQ
Sbjct: 66  DWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQ 125

Query: 219 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 278
           PY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 126 PYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLP 185

Query: 279 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 338
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKH
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKH 245

Query: 339 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 383
           ARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Sbjct: 246 ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290

[Close]

BLAST of Clc04G07510 vs. TAIR 10
Match: AT3G08940.2 (light harvesting complex photosystem II )

HSP 1 Score: 476.9 bits (1226), Expect = 1.6e-134
Identity = 233/285 (81.75%), Postives = 258/285 (90.53%), Query Frame = 0


Query: 99  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 158
           +TAAA SS +GTR ++++  +S R  ARFGFG KK   KK+ +   IS+RPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPGAKSP 64

Query: 159 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 218
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 219 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 278
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLP 184

Query: 279 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKH 338
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKH
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKH 244

Query: 339 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 383
           ARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Sbjct: 245 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287

[Close]

BLAST of Clc04G07510 vs. TAIR 10
Match: AT2G40100.1 (light harvesting complex photosystem II )

HSP 1 Score: 412.1 bits (1058), Expect = 4.7e-115
Identity = 206/270 (76.30%), Postives = 228/270 (84.44%), Query Frame = 0


Query: 100 TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAK 159
           TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   +R +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 160 APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 219
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 220 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 279
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQP
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQP 184

Query: 280 LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEI 339
           LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG YFDPLGLA DPEK   L+LAEI
Sbjct: 185 LPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEI 244

Query: 340 KHARLAMVAFLGFAVQAAVTGKGPLNNWAT 366
           KH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 245 KHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of Clc04G07510 vs. TAIR 10
Match: AT3G08940.1 (light harvesting complex photosystem II )

HSP 1 Score: 262.7 bits (670), Expect = 4.6e-70
Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 0


Query: 99  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAP 158
           +TAAA SS +GTR ++++  +S R  ARFGFG KK   KK+ +   IS+RPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPGAKSP 64

Query: 159 EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 218
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 219 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 278
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L   L 
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVSPLFFSSLLRLCLA 183

[Close]

BLAST of Clc04G07510 vs. TAIR 10
Match: AT2G40100.2 (light harvesting complex photosystem II )

HSP 1 Score: 249.2 bits (635), Expect = 5.3e-66
Identity = 122/169 (72.19%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 100 TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAK 159
           TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   +R +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 160 APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 219
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 220 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE 265
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVE 173

The following BLAST results are available for this feature:

BLAST of Clc04G07510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882769.1	2.1e-157	97.54	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]	[more]
XP_008449241.1	1.0e-156	97.54	PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis m...	[more]
XP_004147887.1	1.8e-156	96.83	chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN5436...	[more]
XP_022978220.1	2.2e-154	95.76	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022950626.1	4.9e-154	95.76	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Clc04G07510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07473	4.3e-137	83.16	Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9XF88	2.2e-133	81.75	Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9S7W1	6.7e-114	76.30	Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q93WD2	7.5e-65	58.22	Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhc...	[more]
Q01667	1.6e-38	42.06	Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Clc04G07510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBB3	5.1e-157	97.54	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BMH8	5.1e-157	97.54	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KXI3	8.6e-157	96.83	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1IPG0	1.1e-154	95.76	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GFC4	2.4e-154	95.76	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Clc04G07510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01530.1	3.1e-138	83.16	light harvesting complex photosystem II	[more]
AT3G08940.2	1.6e-134	81.75	light harvesting complex photosystem II	[more]
AT2G40100.1	4.7e-115	76.30	light harvesting complex photosystem II	[more]
AT3G08940.1	4.6e-70	71.82	light harvesting complex photosystem II	[more]
AT2G40100.2	5.3e-66	72.19	light harvesting complex photosystem II	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 156..352 e-value: 1.5E-50 score: 171.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 150..384 e-value: 1.0E-69 score: 236.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR21649:SF71	CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC	coord: 99..382
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 141..380
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 99..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G07510.2	Clc04G07510.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding