
Clc04G06560 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATCAGGCGGCGGCGGCGGCGGGCGGAGTTACATATGATCATAATTGGAGAAATGGTCCGGCGAGTACGAGAGATAATAGCGATGATTTTCTTCGCGGTGTTTTCCAGCGCCACGGGACTGACGCCGCCGTATTGGAATCGAGGTGGCGGAGCGAGCTGCAGTCCTTGCCTGAGCTGGCGGCTGGCGGCGGAGGTGAACAATGTAGAGCCGTGGAGGACGGTACCGGCGCATTGCTTCAGCTGCATCGGAGCTTACATCACCGGCGGGCAGTACCAGCACGATCTCCGATTCGTAGTGGAGCAAATTCTGAGCTACGCCGACGGAATTCCGGTCGCTGGCGATGGATTTGACGCTTGGATTCTTGATGTGGATGATACTTGCATCTCCAATGTTGATTATTATAAAGTTAAGAGATATGGGTAAGCTTTTTCTATTCTAATTTTAAGCCAATGGGAAATTTTGGGGAAATTTAGGGGATATTCATACTTTTTTAGAAATATATATATATATAGATTAGATTTTACTGCTAATCTCGAACTAGTTCAACCTAGTTCAACCAGTTAAGATGTTATTTTATTATAAAATGTTAAATCTTTAACTTTTTAAATTTAAACTTGTAACAAACTTATTTTAATTAATTTAAAATTCAAGAAGCATTTTGATTTAAATGTCCGGATGAAAATAATACTTTGTTCTTACAAGTTATACATTAGTGGGCATCGTGACTCATGAATTAAGTTTTATGAGTTGAATTTAGTTTCAAATTGGTTTTTATGGGTTTTAAAGTTTCTTTTTATATATATATAAAAGTTTAAATTATGCGTTGAAAATTTTTAAAACTGTTCCACTTTTTGTTTTCCAAATTTTTAAATTGGAAAAGTAATAGAAAAATTAATATAAATATAAAAAATATCTAGTTTGACTCATTTTACCATATTTGAAAAGAGCACAAAGTAATATAGAAAGACGGAAATAAATAGTTTTGTTTTCATTAAAGATTAAATTAAAATTGACATTTTAAAAGTTCAAGGACCATAACATATATTATGAAAATCTAGAAGTCAAAATAAGGCAAACTTAAAAGCTTAGGGACTAAAATGAGAGTTAAACCACTTTTAAACTTGTAATTATGACTAGGCTTATTTTTAATTTGATTTTTAATGGTTTTATACTGTTGCAATTTGATCCCCTTATAATCTAACTTTTACTTTCAGTTTGTTTATATTGTTTAATATTTTCGTTTTAGTGAGTATAGTTGAAGTTTAATCAGTTTGATTTCTACGATTTTAAAAGTAGTATTTTGGTTCATATTATTTAAGTTAGATTTATTTTCAATATAGACTTCTAAATTAATATCACTCAACCATAAACTCTGGTTTAGTCTGTAAAACCCCATTCACCAAATTGAAAATGTCAAATAGGCAGGTGTCCATTTTTAATGACAATAATGATTTAAGGATTTTGATCTAAAAATGTGAATGATTATACTACAAGCATAAGTGAAATTAGAGGTACACCATAAGTGAACATAATTAGTAAGGTAACTTCAATCTACAAAATGCATAAAATTATATTAGAAAAAATCTAAATCCAACAATGAAAATATTCAAACCTAATCATAAAATAAGCATACGATTATATCAAATTTGGGTCAGCTAAGTTAAACTGACCTAAAAATGTTGCTAATCGTAAATTTGCATTATGGAGGAAGTGTATTACTGAAAATCAAAGAAAAGAACTACACACCGATGTAGTATGGGTCACATGTACTCTAATGTCTAAGTCAGAATAGGGAGGTTTATTGTTTCTCCCTATTTATAGGTTGTGGACGGTTTCTTTTTCTCTTTAGGATGTCGCCTAAGTCGACTCCTCTCTTTTTAGGTTGAAAACCTTTGCGCAGATTCAACATTTGAGGGTTCGCCTCGATACCAAGGACGAGCCCCAATATGGCCATTTGGCTTTTGGATTTTTTGATCTTCTTTAAAAAGTCCACATATGTCCTGGCCGAGTCAGTGCATCCAAACAGATGGGTCTGGCCTTGGCCTCGGTCCCGAGTCGGCCTACCCAAATTCACTTCGACCCACTCCTTTGCTTGTCCTAAGTTGCTATAAATAGTGACCATTAGAAGAAACTAACGATAAAGAAATAGCTCTCTCTAACCACCATAATACTTTAATCACAAATCGTAGAGAAGAAATGAAATTGACTTTATAAACAAGTTAAATGACCTAGGATATATATTAAGTTTGTGATAGGGTCTAATTTAATGACTTTGAAAATTGTAAAGTTAAATTTAACCTTTAAAAATATTTAAATTACAAATTTAGTCCTCAAAAGTTGGAAAGTTCACATATATACATCACATACTTCATTATCAAATAATGCTAACATTAAAAAAATTAAATCTTCAAAATTTAAGCCTATTTTAACTTCATTTACTTGTTTGGGTTTGGGTTTTTGTTGTCTTTTTCCTAATTTGTTCTAAAAAAATTTTTTTAGAGATCCTACTTCCACTTATTCTTCTTCTTTTTTTTTTTTTTCATTATCTACTTTAAAACGTTTTGTAAATCAACTTATATAGTTTTCAAAAATAAAAACAAAAAAAAAAGAAAGAAAAAGAAAAACAGACTAGATAAATGAGGAATAAACAAATATAAATTTTTAAAAAGAAAATTACATAAAAAAAAAAACATAACATACAATTAAATGCATTTTCAAAATAGCTGTTAAGTTTACAATTTTACAAAAATAGCACAATATATCCAAATCAAACTCAAACTAAGTTAGAATCAACAAATTTTATCCTTGAAATTTGATTTAAGTTGCATTTAGATTTCTAAGTTTTTAAACTCAATAATTTTACTCCTAAGATTTGCTTTTAGTAGCATCTTTAGTCCCTCCATTAGGTTTTATGTTAATTTCTAATGAAAAGTTAATGTCACATGCCAAAAAGAAGAAACCCCAAAACTACTCTTTGAAGTCTTGCACTATATTAACAATATTAACACCAAGATTCTACTGATTTTTTCATATAATCTTTCCAAATCATATACTAAAGATTATATCTTTTCAAATTTTTCTCCAAATTCGATTATCTTTACCAAATCTTATATCATATGAATTCCCAAATTTCCAAATAAATTTACCAATTATGATTTTCTCGATGGATCTCAAGTGCCTTATGATTTTTAGATTTTGGTAAAGATCAAATTTTGCGAAAAAAAAAAGTAAGATTTGGAGATATAACGAATCTCAATGTTAATCTGCTTGGAATTTCATAGAGATTGCCCAAATATATAGAATCTCATTATTAATCCTGCTCAAGATAACACTAAGATTCTTTATATTTTCCAAAACTTACTTAATTTTTCACAACATTTGATCTTTGGGAGAAAGATTTGAAAAATTACATAAGATTTGATATAAATTTTGGAAAAATTACATATTATTTCGAAAAATTAGTAGAATCTCATTGGTCGATCCCAACTGAGATGAACAGAGAAAAACTATGTTAAGGAGTTTTCAAAAAGGGTGCTAGTCTTGAAAGATGAAAACTTGAAGTGGTTATTTCTTAGCATTTCTCTTTAGTATTCTATATATACTTTTTTTAGAAAAATAAATATTTGGTCTCTAAGTTTTGGATTTAATTTCTATTTGGTATCTCGGTTTTAAAATATTTTATTTTCCCTAAATTTTTAGTTTAACCTTGTAAGTAAATCTGGGTGGTCAATCCCATGTGGACCAAGAAAAATGATTTTAATGAGTTTGCAAAAATAGAAACTTGAATAGGCTATTTCAGACAATTTCCCAGTACTAAAAAGACAAAACTCATCTAAGAGGAGAGAAATTGATTGGGACAGGTGCGAGCCGTACGATCCGGCAGCGTTTAGGTCATGGGCAATGGAAGGAGCATGTCCGGCGATCCAATCGGTGGCGGAGCTCTTCACAAAGCTCATTGGAAGCGGCTTCAAGGTCTTCCTCATCACCGGCCGAGACGAAGAAACTCTTGGCCAAGTAACCATTGAGAATCTCCACCGTGAGGGATTCATCGGCTACGAACGCATAATCTTAAGGTAAAATCAAAATCACAGTTCCTTTTCAAACTGCATAGCAATTCAATTCACTTATCGAATTCCACTGGAAAATTTTCGGTTAGGTCTGCGACGGAAAGAGGGCGGAGCGCAGTGGAGTTTAAGACGGAGATGCGGCGGCGACTAGTGGAGCAAGGGTACCGAATTTGGGGCAATGTTGGAGATCAATGGAGCGATCTTCAGGGGCAATTTGTGGGAAATCGTACTTTTAAGCTACCTAATCCTATGTATTTCGTTCCTTAAATGTCAATGAAAATGTCGATAAAATATCAATAAATGTCAAAAAAAAAAATATCGACAGTTATTGATATGGTTATTTAGTAAATTTATAGAGATGTC GAAAATCAGGCGGCGGCGGCGGCGGGCGGAGTTACATATGATCATAATTGGAGAAATGGTCCGGCGAGTACGAGAGATAATAGCGATGATTTTCTTCGCGGTGTTTTCCAGCGCCACGGGACTGACGCCGCCGTATTGGAATCGAGGTGGCGGAGCGAGCTGCAGTCCTTGCCTGAGCTGGCGGCTGGCGGCGGAGGTGAACAATGTAGAGCCGTGGAGGACGGTACCGGCGCATTGCTTCAGCTGCATCGGAGCTTACATCACCGGCGGGCAGTACCAGCACGATCTCCGATTCGTAGTGGAGCAAATTCTGAGCTACGCCGACGGAATTCCGGTCGCTGGCGATGGATTTGACGCTTGGATTCTTGATGTGGATGATACTTGCATCTCCAATGTTGATTATTATAAAGTTAAGAGATATGGGTGCGAGCCGTACGATCCGGCAGCGTTTAGGTCATGGGCAATGGAAGGAGCATGTCCGGCGATCCAATCGGTGGCGGAGCTCTTCACAAAGCTCATTGGAAGCGGCTTCAAGGTCTTCCTCATCACCGGCCGAGACGAAGAAACTCTTGGCCAAGTAACCATTGAGAATCTCCACCGTGAGGGATTCATCGGCTACGAACGCATAATCTTAAGGTCTGCGACGGAAAGAGGGCGGAGCGCAGTGGAGTTTAAGACGGAGATGCGGCGGCGACTAGTGGAGCAAGGGTACCGAATTTGGGGCAATGTTGGAGATCAATGGAGCGATCTTCAGGGGCAATTTGTGGGAAATCGTACTTTTAAGCTACCTAATCCTATGTATTTCGTTCCTTAAATGTCAATGAAAATGTCGATAAAATATCAATAAATGTCAAAAAAAAAAATATCGACAGTTATTGATATGGTTATTTAGTAAATTTATAGAGATGTC ATGATCATAATTGGAGAAATGGTCCGGCGAGTACGAGAGATAATAGCGATGATTTTCTTCGCGGTGTTTTCCAGCGCCACGGGACTGACGCCGCCGTATTGGAATCGAGGTGGCGGAGCGAGCTGCAGTCCTTGCCTGAGCTGGCGGCTGGCGGCGGAGGTGAACAATGTAGAGCCGTGGAGGACGGTACCGGCGCATTGCTTCAGCTGCATCGGAGCTTACATCACCGGCGGGCAGTACCAGCACGATCTCCGATTCGTAGTGGAGCAAATTCTGAGCTACGCCGACGGAATTCCGGTCGCTGGCGATGGATTTGACGCTTGGATTCTTGATGTGGATGATACTTGCATCTCCAATGTTGATTATTATAAAGTTAAGAGATATGGGTGCGAGCCGTACGATCCGGCAGCGTTTAGGTCATGGGCAATGGAAGGAGCATGTCCGGCGATCCAATCGGTGGCGGAGCTCTTCACAAAGCTCATTGGAAGCGGCTTCAAGGTCTTCCTCATCACCGGCCGAGACGAAGAAACTCTTGGCCAAGTAACCATTGAGAATCTCCACCGTGAGGGATTCATCGGCTACGAACGCATAATCTTAAGGTCTGCGACGGAAAGAGGGCGGAGCGCAGTGGAGTTTAAGACGGAGATGCGGCGGCGACTAGTGGAGCAAGGGTACCGAATTTGGGGCAATGTTGGAGATCAATGGAGCGATCTTCAGGGGCAATTTGTGGGAAATCGTACTTTTAAGCTACCTAATCCTATGTATTTCGTTCCTTAA MIIIGEMVRRVREIIAMIFFAVFSSATGLTPPYWNRGGGASCSPCLSWRLAAEVNNVEPWRTVPAHCFSCIGAYITGGQYQHDLRFVVEQILSYADGIPVAGDGFDAWILDVDDTCISNVDYYKVKRYGCEPYDPAAFRSWAMEGACPAIQSVAELFTKLIGSGFKVFLITGRDEETLGQVTIENLHREGFIGYERIILRSATERGRSAVEFKTEMRRRLVEQGYRIWGNVGDQWSDLQGQFVGNRTFKLPNPMYFVP Homology
BLAST of Clc04G06560 vs. NCBI nr
Match: XP_038882956.1 (acid phosphatase 1 [Benincasa hispida]) HSP 1 Score: 520.4 bits (1339), Expect = 8.9e-144 Identity = 243/258 (94.19%), Postives = 251/258 (97.29%), Query Frame = 0
BLAST of Clc04G06560 vs. NCBI nr
Match: XP_004142728.2 (acid phosphatase 1 [Cucumis sativus] >KGN54464.1 hypothetical protein Csa_012430 [Cucumis sativus]) HSP 1 Score: 505.8 bits (1301), Expect = 2.3e-139 Identity = 234/258 (90.70%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Clc04G06560 vs. NCBI nr
Match: XP_008463285.1 (PREDICTED: acid phosphatase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 504.2 bits (1297), Expect = 6.6e-139 Identity = 233/258 (90.31%), Postives = 246/258 (95.35%), Query Frame = 0
BLAST of Clc04G06560 vs. NCBI nr
Match: XP_023544863.1 (acid phosphatase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 498.0 bits (1281), Expect = 4.7e-137 Identity = 233/258 (90.31%), Postives = 242/258 (93.80%), Query Frame = 0
BLAST of Clc04G06560 vs. NCBI nr
Match: XP_022950507.1 (acid phosphatase 1 [Cucurbita moschata] >KAG7033707.1 Acid phosphatase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 495.4 bits (1274), Expect = 3.1e-136 Identity = 232/258 (89.92%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy Swiss-Prot
Match: P27061 (Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-52 Identity = 91/213 (42.72%), Postives = 132/213 (61.97%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy Swiss-Prot
Match: P15490 (Stem 28 kDa glycoprotein OS=Glycine max OX=3847 GN=VSPA PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 9.5e-40 Identity = 90/247 (36.44%), Postives = 133/247 (53.85%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy Swiss-Prot
Match: P10743 (Stem 31 kDa glycoprotein OS=Glycine max OX=3847 GN=VSPB PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38 Identity = 81/214 (37.85%), Postives = 125/214 (58.41%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy Swiss-Prot
Match: P10742 (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max OX=3847 GN=VSP25 PE=2 SV=2) HSP 1 Score: 159.5 bits (402), Expect = 5.2e-38 Identity = 89/243 (36.63%), Postives = 129/243 (53.09%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy Swiss-Prot
Match: O49195 (Vegetative storage protein 1 OS=Arabidopsis thaliana OX=3702 GN=VSP1 PE=1 SV=2) HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37 Identity = 82/216 (37.96%), Postives = 127/216 (58.80%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy TrEMBL
Match: A0A0A0L074 (Acid phosphatase 1 OS=Cucumis sativus OX=3659 GN=Csa_4G335240 PE=4 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139 Identity = 234/258 (90.70%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy TrEMBL
Match: A0A1S3CIU7 (acid phosphatase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501480 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 3.2e-139 Identity = 233/258 (90.31%), Postives = 246/258 (95.35%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy TrEMBL
Match: A0A6J1GF06 (acid phosphatase 1 OS=Cucurbita moschata OX=3662 GN=LOC111453597 PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136 Identity = 232/258 (89.92%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy TrEMBL
Match: A0A6J1IM85 (acid phosphatase 1 OS=Cucurbita maxima OX=3661 GN=LOC111478301 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132 Identity = 224/258 (86.82%), Postives = 238/258 (92.25%), Query Frame = 0
BLAST of Clc04G06560 vs. ExPASy TrEMBL
Match: A0A6J1CSE1 (acid phosphatase 1 OS=Momordica charantia OX=3673 GN=LOC111013866 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.1e-126 Identity = 213/257 (82.88%), Postives = 229/257 (89.11%), Query Frame = 0
BLAST of Clc04G06560 vs. TAIR 10
Match: AT2G38600.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 322.0 bits (824), Expect = 4.3e-88 Identity = 146/247 (59.11%), Postives = 180/247 (72.87%), Query Frame = 0
BLAST of Clc04G06560 vs. TAIR 10
Match: AT4G29260.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 223.4 bits (568), Expect = 2.1e-58 Identity = 98/241 (40.66%), Postives = 145/241 (60.17%), Query Frame = 0
BLAST of Clc04G06560 vs. TAIR 10
Match: AT4G29270.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 215.7 bits (548), Expect = 4.4e-56 Identity = 97/215 (45.12%), Postives = 136/215 (63.26%), Query Frame = 0
BLAST of Clc04G06560 vs. TAIR 10
Match: AT4G25150.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 209.5 bits (532), Expect = 3.1e-54 Identity = 96/214 (44.86%), Postives = 133/214 (62.15%), Query Frame = 0
BLAST of Clc04G06560 vs. TAIR 10
Match: AT5G51260.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 207.2 bits (526), Expect = 1.6e-53 Identity = 95/214 (44.39%), Postives = 137/214 (64.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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