Clc04G06490 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G06490
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	KH domain-containing protein
Location	ClcChr04: 19834167 .. 19839839 (+)
RNA-Seq Expression	Clc04G06490
Synteny	Clc04G06490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGACCATTTACAATCATAGATTTTCCTCATTTCAGCTGCCTTCCACCCTTTTACTCCTTAGCTCCGCCTCCGCCTCCCTCGTCGGAGCTGTCCTTATCCACCGTCTTCTCGGCCACATCGTTGCCTTAATCTTCCAAAACCCTACTTCCACTTTCCAATCCTCCAATCCTCAGAACATCCATTTCTGCTCATAGTTCAATAGCTCACAGCCATGTCTGGTATGTACAGTACCAACTTCTCCCCTGCAAGAACTGCTTCTCCTCACATCAGAACTACTCCCGATGTCGACAGGTATCCCCTCTGATAACCCACTTCCCGGAATTGAATTTCCCTTTTCTTGTTCTTCTGTTTAATTTAGAATTTTTGTGTTTACTTAGCTTGATAAAAGCTGATTAATCGTTGGATAATCAATCCCTTTTTTGTTCTTTGTTATTTAATCTTTAGTCAGTACTTGTCGGAGTTATTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCGGCCGACTTTTGAATCAAGGTATTGTTCTTCTTTGAATTTTCGGTGTTCTGGACATTCTTTTAGTGTTTAATTGTTGTGGTGATGTATATGTGTATGTTTAGATCGGGGAAACTGATGGGGATTTTTTTTCCTTTTCCTCTTTAGTCTTAATAGCGATTGCTCGTTTTGCCCTCGGGTTTGACTGTTGAATTGTGCATATGTTAGTCAAGGATGAGTTCTTTTACATTTTTTACTCGGGTTTTGTGGAGTGTTTTTGGGGGGTTTTGATCAATGATTCATCCGCCTTTTAAGTTTGTTTGTATCTTGTCTTCACTATGTGCTGAAGAAAGAAAAATGTGTGTTGGCAATTACTTCTCATCTTTCTTCACTTCACTTTTTTCAGTCCTTTGTTTTTTTTTCTCTCCTTTGTTACTTAAAAAAAAAAAAAAAAAGTAGAAATGGGTTGCTTTGTGTTTCTTATTCTATGTTAGTATATTATAAGAAGTTACAAATTTCACTTGAAAATATCATTGAAAAATATATTATTAAATATTATAATGGGGTATTTCTTTAGTTTCATACTTAATAAGTCCTTTATAAGGCAAACATAAGATTTACGTTAATATTTTATAGAACAAAAGGTAAGAAATATGTATGATCAAAATTGTTATCAAATCAGCGAGTGAGGACATTATCAATTGAGCTGGTTCATGCTTTTCGACAAAAGGTGCAGGCAATGCAAATCAGCGAGTGAGGACATTATCTATCGAGCTGCTTCATGCTAGAGTGCTTGAGAAACTAGGCTTGAGTGTGTGTTTCTTGGGAAATGTCAATTTAATCTTATTAACTTTCTCTTATCCAAATTTTTTTTATCAACTTTCAAGGATTTTAAACTAAGCAGACATTTGCATATTGGTAACTTTGGCTTGTGGTGTTCTTGCCTTGCTCTTCTCATGGGCTTTATACCCAGCATCTAACTTGAGTTTTCAGGTGTTGGAAAAACCTTAGCTACTTCTGTAGGGTGCTTAATTCTTCAAGTATATGATGTCCCACTTGTTTATACATATCCATTCTAGTAGAATTTTCTTCTTAAAATTTGGATATTCTTTTGTACTAATTCTTTTACCAAAATCCCTACTAATGTTTCGCTGTCATGAACCAATATACCATTGAAAGACTAAAAACTTTGTGGATACAGTAAGCTTCAGAAAGCGATTTTCAAGCCTTATGGAGTTATTCTAATTGGAGCCTATTCGAATTGAGGGAAGTCATTAAATTTAATATATAATGCTATTAACAGCCAATCAGTAGTTGAGGTTCAAATTCATCTAAATTGGGTGATGCTGCAATCTCATGTTAACGACCTATTCTTTGTGGGTCACTCATGATACCTTAGTTTGTGACATGATAATTGAAGGCTGGATGTTATTGCGGAAAAGCTTTTCAAGTGAAAGTTAATCATTTAAGGTCATGAAGATATGTTGTAGTTTTAGAAATCAATGTGTGAAAAATATGGTGCTTTTAGTCGTTCTCCTGTATGAGCTTCATCGATTAGGATCTGTTCTTTAGGTTGATCCTTTGCATTCTTGAGTTCTAAGGAGATCTCCTTGGAGTCTTTAGCATGTGATAGTCATGTAATGTTCGAAGGTTCAAGTTTCAACCTCCATTTAAATTGCCAAATAGGGTGTTGATGAACTCATCCTGCTCTGAGAGTACATTTTGTTTTTTTTGTTTTTTTTTTTTTTTGCCTTCCAAATTGATCTTGTTATAAATTTCAGTTTTTTTATAAGTGTTCTTCTCTGTACTTAATGCTAAAATATATCTTTATATCTTCCTTTTTAAATATTTATGCTTTTCAATTCTATCAGTAACTTCTCACTGCAAGCTCTTTAAATGCAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTTTGCGACCTTGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATGTCTAATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGGTAATTACTATTTTAGCATCAAAATTTCATTGCTAACTGGCTCCTGACACCTATCGTTCTCATAATTTTGAGTCCAATTTTACCATTTTTTGATATATGGCTTACATATGCCCTGATTATGACTAGATAGTTTGAAGGTAACATTTTAATGCTCCTTCTAAAGTAGGCTCACAAGTCAAAAGTCATAGCTTGAGGGATTGGGACTGCGAGCCATTATTTCTAAATTACAAAAGCTGGCTTGTCACTTTCTTTCTTATGAATTTTGGGACCATAATCAGTGGGAGGAGTGGACTTGATTTTGTCTTTGACTCAATATTTGTTCTGGAATGGAATACATGTCCCATGAAATTGTTAGTTTCTTCCCCACTTTGTGGATCATCTTATTTTGTGTGTTTGTTTGTTCTCAACAAGGCTGGCTCATGTTCCCCAATATGATTGTAATGATACTATTTAATATGCTTATTGAGATCTTATTTTCTCTCATAAATGCCCATGTATTTATGGTAAAAACGTGAAACTTGTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAAAATCTTACTCCATTGAACTTTATGGTAAGAAATTGAGCTTTCATGGAGAGAAATGAAATAATCAAGCATGTAAACTTCCAATCTTGAAAATCTTACTCCATTGACTTCCTTCAGAAATAAAAGAAGTGAGAGAGGATTTCTTTGACCAAGTTTAGACTTGTGATAAGGAATTTGTTTTACTATTTTTCACTAGTGGTCAAAAAGTTCTTCGCCAGTCTTGAGGATTGTCTTGCACTGGTTGCCTTGTTGGTCCTCCACTTTAAAGTTCAACCAAATGCATCGTCTATGAGACCAAAGAGCATTCATTTAGGTGAAATAAAAAATACATAATAATTTTTCTTTTTGCAAGTGTTCATCTGTAGAAGTATGTGTAACAAGTCCCGATTAATCCACTGTTTCTTGCAAAAGTTGGCTTCTTGTGGTAACCTTATCCGAAGTTATTACAAGAATAACTATATATAGATTGCTATATGAAAATATTTCTCCTGGCTACGTTTTCAATGTTCCAATTCCATCTTCATTTTGGATCCTCTTGATTTTATCATTGCATACTGGTATCTCCTGTGCTTCCAGTCTTATATTCATATAGAATTCTATCTATAATAATTAGTCTTCTGGATGGTTTGCCTTGGTTTGTTTTAAAGTTGTATTAAGATGCTAGAACCTTTTGAAACATACAGCAGAGATTAAGTAGAGCTCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCACTCACCGTAAAGAGGATTCTACGTTTGGAAATACCCGTGGATACATACCCCAATGTGAGTTCTGTCAGAGAACAAATGTCTTTATTTTCTGTTCATATGACATCTGGCCTGTACATGCACAAACATATATACTAATACTTGAAGTTTCTGCTTTTTGTGGATAGTTCAATTTCGTAGGGAGGCTTTTGGGACCTCGTGGCAATTCCTTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCGATAAAGGATCCGGACAAGGTACTATAAGGATATTGCTATTTTGAATTGATGTATGTCATTAACATTGATTCACATGATGGATCTCTCACTCAAAAGTCGAGAGTAGTAAAGAGATATTTTGCTTCTTTCATTGGATTGTTTTCATTCTGTTAAGTAGTGGTATTTGTTATAAATCGTATTCTTAATCTGTTACTTTTACATTATCAAGGAAGAGAAATTACGGGGACGACCTGGCTATGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGACTTACCAGCCAATATTGTTGATATACGTCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCGGTGGTATGTTTTCAACCTTGGATACGCTTGTGGCTGGCCGAAATTAAAATATCCATGCTCAAAAGAACTTCACTGTCAAAATCATCATATTGTGGAAGTGATTTAAAAATTAGAAGTGTGCTCTTATAAAAAGCCAAAAGCTCTTGTTAAGTGTTTTTTTACCAAAGTGATCGTTAGAGAGCACTTGAAATGTCTCAAGAGTGTAGAACAAACTATCAAAGTTATTTGTCATCACTTTTTATGGAAGTGCTTAGTATTTTTGCTAAACAAACTTATTTTAAAAGCGCTCCCATAAATACCTTTTTAGTTATACTACTCCAACTGTATTCTATTTATATTGGCAAAACATACCGGTTTAATTGTAACTCATTTACTTGCTTACAAGATTGAAGTTGCTTTCAACAACATTTCTTGAATCAATGGGTCAAGGTATCTTTTTTACTTTTACTTAGGCTGATCATCAACCTCTCATGGATTTCTTGCATTCCTCATCCTTTGATGCATTTGATTCGGATTTTCCCTTTTTCCTTTTCCAGAACGTGGTGTGTGCTAACAAACTTCTGATTCCATTTGCAGGATGAAAGTCATGATTACATTAAAAGGCAGCAGCTACGCGAACTTGCGATGCTAAATTCGAGTTTCAGAGAAGAGAGTCCAGGACCTGGTGGTAGCGTCTCTCCTTTCAACTCAAGTGGAATGAAACGTGCCAAAACAGGTCGTTGAGCGCTCATATCATTCCGTACCCTAAACAATTTCTACCCCAGTCCAGATTTCGGTCACTTATATAACATGATGTGAATCATGACCGACCGTGTGACATAGCTACGAGAAAAGGGAGGCTAACTTAAGTTCCAGGCGAGCCTTCTTACTTACTGGCTTTTTCTCTGTGTTCCCTTTAGTATTCTTGACAGAAAGACTGGAAAAAGGTTTTAAAAAGGAAAAAAAAACAGAGGGTGAAAAGGGGAAAAATTTGTTAGTATTAGTAGGGATGGGTTTTCATGTTGAGTGTAGGTTTGAATAGGTCAGTTTTCCAACAAAGTTAATATATTCATTGGATTTATTCTTGTGTTAGTGACTTCTGAGGAGTGTGTAGTTTTACATTATTGATGCAAAAACATTAGGAAGTGATGATGTAATACTATTTGATATTTGTTAGGTGTTGTATGCAATGTCAATGTCAATTATATTTTTGGACTAAGACCAGTGCA

mRNA sequence

GACGACCATTTACAATCATAGATTTTCCTCATTTCAGCTGCCTTCCACCCTTTTACTCCTTAGCTCCGCCTCCGCCTCCCTCGTCGGAGCTGTCCTTATCCACCGTCTTCTCGGCCACATCGTTGCCTTAATCTTCCAAAACCCTACTTCCACTTTCCAATCCTCCAATCCTCAGAACATCCATTTCTGCTCATAGTTCAATAGCTCACAGCCATGTCTGGTATGTACAGTACCAACTTCTCCCCTGCAAGAACTGCTTCTCCTCACATCAGAACTACTCCCGATGTCGACAGTCAGTACTTGTCGGAGTTATTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCGGCCGACTTTTGAATCAAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTTTGCGACCTTGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATGTCTAATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGATTAAGTAGAGCTCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCACTCACCGTAAAGAGGATTCTACGTTTGGAAATACCCGTGGATACATACCCCAATTTCAATTTCGTAGGGAGGCTTTTGGGACCTCGTGGCAATTCCTTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCGATAAAGGATCCGGACAAGGAAGAGAAATTACGGGGACGACCTGGCTATGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGACTTACCAGCCAATATTGTTGATATACGTCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCGGTGGCTGATCATCAACCTCTCATGGATTTCTTGCATTCCTCATCCTTTGATGCATTTGATTCGGATTTTCCCTTTTTCCTTTTCCAGAACGTGGATGAAAGTCATGATTACATTAAAAGGCAGCAGCTACGCGAACTTGCGATGCTAAATTCGAGTTTCAGAGAAGAGAGTCCAGGACCTGGTGGTAGCGTCTCTCCTTTCAACTCAAGTGGAATGAAACGTGCCAAAACAGGTCGTTGAGCGCTCATATCATTCCGTACCCTAAACAATTTCTACCCCAGTCCAGATTTCGGTCACTTATATAACATGATGTGAATCATGACCGACCGTGTGACATAGCTACGAGAAAAGGGAGGCTAACTTAAGTTCCAGGCGAGCCTTCTTACTTACTGGCTTTTTCTCTGTGTTCCCTTTAGTATTCTTGACAGAAAGACTGGAAAAAGGTTTTAAAAAGGAAAAAAAAACAGAGGGTGAAAAGGGGAAAAATTTGTTAGTATTAGTAGGGATGGGTTTTCATGTTGAGTGTAGGTTTGAATAGGTCAGTTTTCCAACAAAGTTAATATATTCATTGGATTTATTCTTGTGTTAGTGACTTCTGAGGAGTGTGTAGTTTTACATTATTGATGCAAAAACATTAGGAAGTGATGATGTAATACTATTTGATATTTGTTAGGTGTTGTATGCAATGTCAATGTCAATTATATTTTTGGACTAAGACCAGTGCA

Coding sequence (CDS)

ATGTCTGGTATGTACAGTACCAACTTCTCCCCTGCAAGAACTGCTTCTCCTCACATCAGAACTACTCCCGATGTCGACAGTCAGTACTTGTCGGAGTTATTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCGGCCGACTTTTGAATCAAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTTTGCGACCTTGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATGTCTAATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGATTAAGTAGAGCTCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCTAGTTCACTCACCGTAAAGAGGATTCTACGTTTGGAAATACCCGTGGATACATACCCCAATTTCAATTTCGTAGGGAGGCTTTTGGGACCTCGTGGCAATTCCTTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCGATAAAGGATCCGGACAAGGAAGAGAAATTACGGGGACGACCTGGCTATGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGACTTACCAGCCAATATTGTTGATATACGTCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCGGTGGCTGATCATCAACCTCTCATGGATTTCTTGCATTCCTCATCCTTTGATGCATTTGATTCGGATTTTCCCTTTTTCCTTTTCCAGAACGTGGATGAAAGTCATGATTACATTAAAAGGCAGCAGCTACGCGAACTTGCGATGCTAAATTCGAGTTTCAGAGAAGAGAGTCCAGGACCTGGTGGTAGCGTCTCTCCTTTCAACTCAAGTGGAATGAAACGTGCCAAAACAGGTCGTTGA

Protein sequence

MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR

Homology

[Close]

BLAST of Clc04G06490 vs. NCBI nr
Match: XP_011653733.1 (KH domain-containing protein At2g38610 isoform X1 [Cucumis sativus] >KAE8649596.1 hypothetical protein Csa_012547 [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 3.7e-152
Identity = 280/312 (89.74%), Postives = 282/312 (90.38%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLM+NVSSTGLSGWNGLPQEQRLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 282

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 282

[Close]

BLAST of Clc04G06490 vs. NCBI nr
Match: XP_008463293.1 (PREDICTED: KH domain-containing protein At2g38610 [Cucumis melo])

HSP 1 Score: 543.1 bits (1398), Expect = 1.6e-150
Identity = 280/312 (89.74%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE RLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE-RLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 281

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 281

[Close]

BLAST of Clc04G06490 vs. NCBI nr
Match: XP_038882687.1 (KH domain-containing protein At2g38610 isoform X1 [Benincasa hispida])

HSP 1 Score: 542.7 bits (1397), Expect = 2.0e-150
Identity = 280/312 (89.74%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMAS+NLMSNV STGLSGWNGLPQEQRLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASANLMSNV-STGLSGWNGLPQEQRLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 281

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 281

[Close]

BLAST of Clc04G06490 vs. NCBI nr
Match: XP_004142668.1 (KH domain-containing protein At2g38610 isoform X2 [Cucumis sativus])

HSP 1 Score: 542.0 bits (1395), Expect = 3.5e-150
Identity = 279/312 (89.42%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLM+NVSSTGLSGWNGLPQE RLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQE-RLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 281

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 281

[Close]

BLAST of Clc04G06490 vs. NCBI nr
Match: XP_022925242.1 (KH domain-containing protein At3g08620-like isoform X1 [Cucurbita moschata] >KAG7027519.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.3 bits (1388), Expect = 2.2e-149
Identity = 276/312 (88.46%), Postives = 277/312 (88.78%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS GLSGWNGLPQEQRLSR PGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 282

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 282

[Close]

BLAST of Clc04G06490 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.9e-123
Identity = 241/317 (76.03%), Postives = 257/317 (81.07%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVD-SQYLSELLAEHQKFGPFMQVLPICGRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP++D SQYL+ELLAEHQK  PFMQVLPIC RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNLMSNVS+TGL GWNGL QE RLS  PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADH 240
           KGSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELLKP    
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKP---- 240

Query: 241 QPLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNS-SFREESPGP--G 300
                                     VDES D+IKRQQLRELA+LNS + REESPGP  G
Sbjct: 241 --------------------------VDESQDFIKRQQLRELALLNSNNLREESPGPSGG 285

Query: 301 GSVSPFNSSGMKRAKTG 312
           GSVSPFNSSG KR KTG
Sbjct: 301 GSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Clc04G06490 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.4e-122
Identity = 228/314 (72.61%), Postives = 249/314 (79.30%), Query Frame = 0


Query: 1   MSGMYS-TNFSPARTASPHIRT-TPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEI 60
           MSG+Y+  NFSP+R ASP IRT + DVDSQY+S+LLAEHQK GPFMQVLPIC RLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTM 120
            R++GMM NQGF D DRLRHRSPSPMAS NLMSNVS  GL GWNGLP E R+    GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           +WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQ 240
           GSIKDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDI+LRQAQEIIEEL+KP     
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKP----- 240

Query: 241 PLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVS 300
                                    VDES DYIKRQQLRELA+LNS+ RE SPGP GSVS
Sbjct: 241 -------------------------VDESQDYIKRQQLRELALLNSNLRENSPGPSGSVS 283

Query: 301 PFNSSGMKRAKTGR 313
           PFNS+ MKR KTGR
Sbjct: 301 PFNSNAMKRPKTGR 283

[Close]

BLAST of Clc04G06490 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.6e-108
Identity = 206/313 (65.81%), Postives = 237/313 (75.72%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTP-DVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEIL 60
           MSG+YS  FSPAR  SP IR+ P DVDSQYL+ELLAEHQK GPFMQVLPIC +LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMD 120
           RVS ++ N GF D DR R RSPSPM+S N  SN S  G S WNGL QE RL    G +MD
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQE-RLGFPQGTSMD 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ AP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVE +TGCRV+IRGKG
Sbjct: 121 WQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 180

Query: 181 SIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQP 240
           SIKDP KE+KLRG+PGYEHL++PLHILIEA+ PA+I+D RLR AQE+IEELLKP      
Sbjct: 181 SIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKP------ 240

Query: 241 LMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSP 300
                                   VDES D+ KRQQLRELAMLNS+ RE+SP P GSVSP
Sbjct: 241 ------------------------VDESQDFYKRQQLRELAMLNSTLREDSPHP-GSVSP 281

Query: 301 FNSSGMKRAKTGR 313
           F++ GMKRAKTG+
Sbjct: 301 FSNGGMKRAKTGQ 281

[Close]

BLAST of Clc04G06490 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.7e-73
Identity = 156/310 (50.32%), Postives = 198/310 (63.87%), Query Frame = 0


Query: 2   SGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRV 61
           S   S NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQEILRV
Sbjct: 37  SAPQSPNFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRV 96

Query: 62  SGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQEQRLSRAPGMTMDW 121
           + ++ N     L + R   PSP+AS  +  N S   ++GW +  P E+ +S +P    +W
Sbjct: 97  TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSP--APNW 156

Query: 122 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 181
            ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS
Sbjct: 157 LNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 216

Query: 182 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 241
           IKDP KE+ +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL P       
Sbjct: 217 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP------- 276

Query: 242 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 301
                                  V+E+HD+ K+QQLRELA+LN S REE     GS+SP+
Sbjct: 277 -----------------------VEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY 306

Query: 302 NSSGMKRAKT 311
           NS GMKRAKT
Sbjct: 337 NSLGMKRAKT 306

[Close]

BLAST of Clc04G06490 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-72
Identity = 158/316 (50.00%), Postives = 201/316 (63.61%), Query Frame = 0


Query: 5   YSTNFS--PARTASPH----IRTTPDV---DSQYLSELLAEHQKFGPFMQVLPICGRLLN 64
           YS++ S  P+   SP+    +R+   V     +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQEQRLSRAP 124
           QEILRV+ ++ N        L H  PSP+AS  +  N +   ++GW +  P E+ +  +P
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSERSVPSSP 151

Query: 125 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 184
           G   +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV 
Sbjct: 152 G--PNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 211

Query: 185 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 244
           IRG+GSIKDP KEE +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL P 
Sbjct: 212 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP- 271

Query: 245 ADHQPLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPG 304
                                        ++E+HD  K+QQLRELA+LN + REE     
Sbjct: 272 -----------------------------MEETHDMYKKQQLRELALLNGTLREEGSPMS 312

Query: 305 GSVSPFNSSGMKRAKT 311
           GSVSP+NS GMKRAKT
Sbjct: 332 GSVSPYNSLGMKRAKT 312

[Close]

BLAST of Clc04G06490 vs. ExPASy TrEMBL
Match: A0A1S3CIV3 (KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.5e-151
Identity = 280/312 (89.74%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE RLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE-RLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 281

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 281

[Close]

BLAST of Clc04G06490 vs. ExPASy TrEMBL
Match: A0A0A0KXW7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337270 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.7e-150
Identity = 279/312 (89.42%), Postives = 281/312 (90.06%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLM+NVSSTGLSGWNGLPQE RLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQE-RLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 281

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 281

[Close]

BLAST of Clc04G06490 vs. ExPASy TrEMBL
Match: A0A6J1EB88 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-149
Identity = 276/312 (88.46%), Postives = 277/312 (88.78%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS GLSGWNGLPQEQRLSR PGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 282

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 282

[Close]

BLAST of Clc04G06490 vs. ExPASy TrEMBL
Match: A0A6J1HTR7 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466075 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.1e-149
Identity = 275/312 (88.14%), Postives = 276/312 (88.46%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFM VLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS GLSGWNGLPQEQRLSR PGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDIRLRQAQEIIEELLKP       
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKP------- 240

Query: 241 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 300
                                  VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF
Sbjct: 241 -----------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 282

Query: 301 NSSGMKRAKTGR 313
           NSSGMKRAKTGR
Sbjct: 301 NSSGMKRAKTGR 282

[Close]

BLAST of Clc04G06490 vs. ExPASy TrEMBL
Match: A0A5D3C4T5 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00820 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.1e-149
Identity = 277/309 (89.64%), Postives = 278/309 (89.97%), Query Frame = 0


Query: 4   MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG 63
           MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG
Sbjct: 1   MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG 60

Query: 64  MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTMDWQSA 123
           MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE RLSRAPGMTMDWQSA
Sbjct: 61  MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE-RLSRAPGMTMDWQSA 120

Query: 124 PASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKD 183
           PASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKD
Sbjct: 121 PASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKD 180

Query: 184 PDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPLMDF 243
           PDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKP          
Sbjct: 181 PDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKP---------- 240

Query: 244 LHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSS 303
                               VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSS
Sbjct: 241 --------------------VDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSS 278

Query: 304 GMKRAKTGR 313
           GMKRAKTGR
Sbjct: 301 GMKRAKTGR 278

[Close]

BLAST of Clc04G06490 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-124
Identity = 241/317 (76.03%), Postives = 257/317 (81.07%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVD-SQYLSELLAEHQKFGPFMQVLPICGRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP++D SQYL+ELLAEHQK  PFMQVLPIC RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNLMSNVS+TGL GWNGL QE RLS  PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADH 240
           KGSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELLKP    
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKP---- 240

Query: 241 QPLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNS-SFREESPGP--G 300
                                     VDES D+IKRQQLRELA+LNS + REESPGP  G
Sbjct: 241 --------------------------VDESQDFIKRQQLRELALLNSNNLREESPGPSGG 285

Query: 301 GSVSPFNSSGMKRAKTG 312
           GSVSPFNSSG KR KTG
Sbjct: 301 GSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Clc04G06490 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-124
Identity = 241/317 (76.03%), Postives = 257/317 (81.07%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVD-SQYLSELLAEHQKFGPFMQVLPICGRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP++D SQYL+ELLAEHQK  PFMQVLPIC RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNLMSNVS+TGL GWNGL QE RLS  PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADH 240
           KGSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELLKP    
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKP---- 240

Query: 241 QPLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNS-SFREESPGP--G 300
                                     VDES D+IKRQQLRELA+LNS + REESPGP  G
Sbjct: 241 --------------------------VDESQDFIKRQQLRELALLNSNNLREESPGPSGG 285

Query: 301 GSVSPFNSSGMKRAKTG 312
           GSVSPFNSSG KR KTG
Sbjct: 301 GSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Clc04G06490 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 438.7 bits (1127), Expect = 3.8e-123
Identity = 228/314 (72.61%), Postives = 249/314 (79.30%), Query Frame = 0


Query: 1   MSGMYS-TNFSPARTASPHIRT-TPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEI 60
           MSG+Y+  NFSP+R ASP IRT + DVDSQY+S+LLAEHQK GPFMQVLPIC RLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQEQRLSRAPGMTM 120
            R++GMM NQGF D DRLRHRSPSPMAS NLMSNVS  GL GWNGLP E R+    GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           +WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQ 240
           GSIKDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDI+LRQAQEIIEEL+KP     
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKP----- 240

Query: 241 PLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVS 300
                                    VDES DYIKRQQLRELA+LNS+ RE SPGP GSVS
Sbjct: 241 -------------------------VDESQDYIKRQQLRELALLNSNLRENSPGPSGSVS 283

Query: 301 PFNSSGMKRAKTGR 313
           PFNS+ MKR KTGR
Sbjct: 301 PFNSNAMKRPKTGR 283

[Close]

BLAST of Clc04G06490 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.9e-74
Identity = 156/310 (50.32%), Postives = 198/310 (63.87%), Query Frame = 0


Query: 2   SGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRV 61
           S   S NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQEILRV
Sbjct: 37  SAPQSPNFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRV 96

Query: 62  SGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQEQRLSRAPGMTMDW 121
           + ++ N     L + R   PSP+AS  +  N S   ++GW +  P E+ +S +P    +W
Sbjct: 97  TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSP--APNW 156

Query: 122 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 181
            ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS
Sbjct: 157 LNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 216

Query: 182 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVADHQPL 241
           IKDP KE+ +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL P       
Sbjct: 217 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP------- 276

Query: 242 MDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPF 301
                                  V+E+HD+ K+QQLRELA+LN S REE     GS+SP+
Sbjct: 277 -----------------------VEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY 306

Query: 302 NSSGMKRAKT 311
           NS GMKRAKT
Sbjct: 337 NSLGMKRAKT 306

[Close]

BLAST of Clc04G06490 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-73
Identity = 158/316 (50.00%), Postives = 201/316 (63.61%), Query Frame = 0


Query: 5   YSTNFS--PARTASPH----IRTTPDV---DSQYLSELLAEHQKFGPFMQVLPICGRLLN 64
           YS++ S  P+   SP+    +R+   V     +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQEQRLSRAP 124
           QEILRV+ ++ N        L H  PSP+AS  +  N +   ++GW +  P E+ +  +P
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSERSVPSSP 151

Query: 125 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 184
           G   +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV 
Sbjct: 152 G--PNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 211

Query: 185 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 244
           IRG+GSIKDP KEE +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL P 
Sbjct: 212 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP- 271

Query: 245 ADHQPLMDFLHSSSFDAFDSDFPFFLFQNVDESHDYIKRQQLRELAMLNSSFREESPGPG 304
                                        ++E+HD  K+QQLRELA+LN + REE     
Sbjct: 272 -----------------------------MEETHDMYKKQQLRELALLNGTLREEGSPMS 312

Query: 305 GSVSPFNSSGMKRAKT 311
           GSVSP+NS GMKRAKT
Sbjct: 332 GSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Clc04G06490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653733.1	3.7e-152	89.74	KH domain-containing protein At2g38610 isoform X1 [Cucumis sativus] >KAE8649596....	[more]
XP_008463293.1	1.6e-150	89.74	PREDICTED: KH domain-containing protein At2g38610 [Cucumis melo]	[more]
XP_038882687.1	2.0e-150	89.74	KH domain-containing protein At2g38610 isoform X1 [Benincasa hispida]	[more]
XP_004142668.1	3.5e-150	89.42	KH domain-containing protein At2g38610 isoform X2 [Cucumis sativus]	[more]
XP_022925242.1	2.2e-149	88.46	KH domain-containing protein At3g08620-like isoform X1 [Cucurbita moschata] >KAG...	[more]

BLAST of Clc04G06490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVI3	2.9e-123	76.03	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q8GYR4	5.4e-122	72.61	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	2.6e-108	65.81	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	2.7e-73	50.32	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	1.8e-72	50.00	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Clc04G06490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIV3	7.5e-151	89.74	KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 P...	[more]
A0A0A0KXW7	1.7e-150	89.42	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337270 PE=4 SV=...	[more]
A0A6J1EB88	1.1e-149	88.46	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1HTR7	4.1e-149	88.14	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A5D3C4T5	4.1e-149	89.64	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Clc04G06490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38610.1	2.0e-124	76.03	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	2.0e-124	76.03	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	3.8e-123	72.61	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.9e-74	50.32	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	1.3e-73	50.00	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 132..232 e-value: 1.3E-5 score: 34.6
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 149..185 e-value: 1.4E-4 score: 21.6
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 23..70 e-value: 1.1E-12 score: 47.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 19..293 e-value: 6.9E-66 score: 224.1
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 139..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..312
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..238 coord: 260..312
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 137..287 e-value: 3.60591E-51 score: 163.184
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..238 coord: 260..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G06490.2	Clc04G06490.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding