Clc04G04780 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGTATTGCTAGATTCGGACCTAATGGTTTGCATGAATGGGAAGTTGGGCAATATACAAGAGACGTTGAATATGGAATTGATTCTATTTGTAGGCGTGGGTATATTCATTCTAATATTAAACCATAAAACATACTACTTTTGATTCCGAAATAGTTGATTTTGGATTGGCAATGGAGATGACCAGTGTAGTGACTATTGACGACGATAACATTAGAGGAACTAAGTCATACATAGCAACGGAGTCATTGAGGGATAGTTACTTTGATTGGTCTGTTGATGTATGGGCACTTGGATGCATGGTGTTGGAGATGTTGACTGGAAAACAAGTGTGGAGTTCTAAAAAGTTCCATCTTGATATGCTCACTTATATTAACCATAGTAACAAATTTTCAGACATGCTAAATGGGTTATCGCCGATGGCAATTGATTTTTTTGAGAAGATGTTTAGTAAAAAAATCCTTACAAAAGATCGCCGGCATGGTTGTTGCTTGATCATCCATTTATTTATCATTTTTCATGATCACTTTAGGAGCCAACATTAA ATGATCGTATTGCTAGATTCGGACCTAATGGTTTGCATGAATGGGAAGTTGGGCAATATACAAGAGACGTTGAATATGGAATTGATTCTATTTGTAGGCGTGGTTGATTTTGGATTGGCAATGGAGATGACCAGTGTAGTGACTATTGACGACGATAACATTAGAGGAACTAAGTCATACATAGCAACGGAGTCATTGAGGGATAGTTACTTTGATTGGTCTGTTGATGTATGGGCACTTGGATGCATGGTGTTGGAGATGTTGACTGGAAAACAAGTGTGGAGTTCTAAAAAGTTCCATCTTGATATGCTCACTTATATTAACCATAGTAACAAATTTTCAGACATGCTAAATGGGTTATCGCCGATGGCAATTGATTTTTTTGAGAAGATGTTTAGTAAAAAAATCCTTACAAAAGATCGCCGGCATGGTTGTTGCTTGATCATCCATTTATTTATCATTTTTCATGATCACTTTAGGAGCCAACATTAA ATGATCGTATTGCTAGATTCGGACCTAATGGTTTGCATGAATGGGAAGTTGGGCAATATACAAGAGACGTTGAATATGGAATTGATTCTATTTGTAGGCGTGGTTGATTTTGGATTGGCAATGGAGATGACCAGTGTAGTGACTATTGACGACGATAACATTAGAGGAACTAAGTCATACATAGCAACGGAGTCATTGAGGGATAGTTACTTTGATTGGTCTGTTGATGTATGGGCACTTGGATGCATGGTGTTGGAGATGTTGACTGGAAAACAAGTGTGGAGTTCTAAAAAGTTCCATCTTGATATGCTCACTTATATTAACCATAGTAACAAATTTTCAGACATGCTAAATGGGTTATCGCCGATGGCAATTGATTTTTTTGAGAAGATGTTTAGTAAAAAAATCCTTACAAAAGATCGCCGGCATGGTTGTTGCTTGATCATCCATTTATTTATCATTTTTCATGATCACTTTAGGAGCCAACATTAA MIVLLDSDLMVCMNGKLGNIQETLNMELILFVGVVDFGLAMEMTSVVTIDDDNIRGTKSYIATESLRDSYFDWSVDVWALGCMVLEMLTGKQVWSSKKFHLDMLTYINHSNKFSDMLNGLSPMAIDFFEKMFSKKILTKDRRHGCCLIIHLFIIFHDHFRSQH Homology
BLAST of Clc04G04780 vs. NCBI nr
Match: XP_038882353.1 (mitogen-activated protein kinase kinase kinase 3-like [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22 Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Clc04G04780 vs. NCBI nr
Match: XP_010431031.1 (PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Camelina sativa]) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-10 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of Clc04G04780 vs. NCBI nr
Match: KAG6589837.1 (Mitogen-activated protein kinase kinase kinase 20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.9 bits (185), Expect = 3.7e-10 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0
BLAST of Clc04G04780 vs. NCBI nr
Match: XP_022960664.1 (mitogen-activated protein kinase kinase kinase 17-like [Cucurbita moschata]) HSP 1 Score: 75.9 bits (185), Expect = 3.7e-10 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0
BLAST of Clc04G04780 vs. NCBI nr
Match: KAG7023508.1 (Mitogen-activated protein kinase kinase kinase 17, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 75.9 bits (185), Expect = 3.7e-10 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy Swiss-Prot
Match: Q9SND6 (Mitogen-activated protein kinase kinase kinase 20 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK20 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10 Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy Swiss-Prot
Match: O22042 (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana OX=3702 GN=ANP3 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08 Identity = 30/105 (28.57%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy Swiss-Prot
Match: Q9FZ36 (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana OX=3702 GN=ANP2 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07 Identity = 28/105 (26.67%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy Swiss-Prot
Match: Q9ZVP5 (Mitogen-activated protein kinase kinase kinase 18 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK18 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07 Identity = 35/123 (28.46%), Postives = 61/123 (49.59%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy Swiss-Prot
Match: Q54R82 (Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum OX=44689 GN=mkkA PE=1 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 6.7e-07 Identity = 34/123 (27.64%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy TrEMBL
Match: A0A6J1HBP5 (mitogen-activated protein kinase kinase kinase 17-like OS=Cucurbita moschata OX=3662 GN=LOC111461386 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.8e-10 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy TrEMBL
Match: A0A6J1JAH8 (mitogen-activated protein kinase kinase kinase 17-like OS=Cucurbita maxima OX=3661 GN=LOC111485031 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 6.8e-10 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy TrEMBL
Match: A0A067KK10 (Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_13145 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 8.8e-10 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy TrEMBL
Match: A0A7J6W960 (Mitogen-activated protein kinase kinase kinase OS=Thalictrum thalictroides OX=46969 GN=FRX31_017597 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Clc04G04780 vs. ExPASy TrEMBL
Match: A0A7J7HV91 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_008850 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.5e-09 Identity = 49/154 (31.82%), Postives = 77/154 (50.00%), Query Frame = 0
BLAST of Clc04G04780 vs. TAIR 10
Match: AT3G50310.1 (mitogen-activated protein kinase kinase kinase 20 ) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11 Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Clc04G04780 vs. TAIR 10
Match: AT5G67080.1 (mitogen-activated protein kinase kinase kinase 19 ) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11 Identity = 51/145 (35.17%), Postives = 72/145 (49.66%), Query Frame = 0
BLAST of Clc04G04780 vs. TAIR 10
Match: AT2G30040.1 (mitogen-activated protein kinase kinase kinase 14 ) HSP 1 Score: 65.1 bits (157), Expect = 6.0e-11 Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 0
BLAST of Clc04G04780 vs. TAIR 10
Match: AT3G45670.1 (Protein kinase superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of Clc04G04780 vs. TAIR 10
Match: AT3G06030.1 (NPK1-related protein kinase 3 ) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09 Identity = 30/105 (28.57%), Postives = 56/105 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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