Clc04G01425 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G01425
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr04: 3837121 .. 3838076 (-)
RNA-Seq Expression	Clc04G01425
Synteny	Clc04G01425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAAGAATTTCAAACTCGAACTTCAGCATGTATTGATCGTAAGGAATGATGATACGATGTCTGGTGTGCTTTCTCATCTATGTTGATCGATAACCATATAACAGAAGAAATTTCTTCAAACGCAATGTATAAAGCATTGACTAAAACAAGAGTGTAGGAACTAGATTTTTATTTACTAACCATTCGAATAAATGTTTGAATAGTGTTGGCAAGTAACATTTTAATGAACCAATGTACTGATTATAAACATATTCTCTAACTTACGAGAATTAAAGATTTCAAAGTTTGGAGACACTCTTCGATTCCTTGAACTGCCATACGATTTCAAACCCTTACATATATGCCGGTACTAATAGCAAGCCAAACTTATTTTTTTTTTTTAGAAAAACATGTTCATCTTACAAAGTTTCTAATTAAGATATACGGCAGACGTAACATTGTTCATGAAATAATAAGATTTTTCAAAATACAAGTTTATTTTTCAAATATGTTACATTTATTTCAAAAATTGTTGGTTAAGATATTTTGTTTCAAGGGAAAACAATTAGTATCATCAAGAAAATAAAAAGCACACAACACATCTAACTTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATAGGGCATACCAGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGACTTCATGTCCTTCTGCTTGGACAAAGCTACTCATTCAAGTTTAGACCTAACCTCTTGGGGACGACATTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTTGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCACCGATGGCAAACAAATTTGCTATACCTATGGAGATAAAGAACCAAGCATTATGTAA

mRNA sequence

ATGTATAAGAATTTCAAACTCGAACTTCAGCATGTATTGATCGGCATACCAGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGACTTCATGTCCTTCTGCTTGGACAAAGCTACTCATTCAAGTTTAGACCTAACCTCTTGGGGACGACATTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTTGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCACCGATGGCAAACAAATTTGCTATACCTATGGAGATAAAGAACCAAGCATTATGTAA

Coding sequence (CDS)

ATGTATAAGAATTTCAAACTCGAACTTCAGCATGTATTGATCGGCATACCAGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGACTTCATGTCCTTCTGCTTGGACAAAGCTACTCATTCAAGTTTAGACCTAACCTCTTGGGGACGACATTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTTGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCACCGATGGCAAACAAATTTGCTATACCTATGGAGATAAAGAACCAAGCATTATGTAA

Protein sequence

MYKNFKLELQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM

Homology

[Close]

BLAST of Clc04G01425 vs. NCBI nr
Match: KGN55015.2 (hypothetical protein Csa_011982, partial [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 3.2e-48
Identity = 88/104 (84.62%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD 
Sbjct: 82  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDD 141

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTCTWIIHEYSMCLQ+PK   GK+ICY YGDKEP I+
Sbjct: 142 KRDAGKCTTCTWIIHEYSMCLQDPK-NPGKEICYNYGDKEPGII 184

[Close]

BLAST of Clc04G01425 vs. NCBI nr
Match: KGN55010.2 (hypothetical protein Csa_012448 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 3.2e-48
Identity = 88/104 (84.62%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTCTWIIHEYSMCLQ+PK   GK+ICY YGDKEP I+
Sbjct: 103 KRDAGKCTTCTWIIHEYSMCLQDPK-NPGKEICYNYGDKEPGII 145

[Close]

BLAST of Clc04G01425 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. NCBI nr
Match: KAA0059246.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-18
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 9   LQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYW 68
           + +++ G P+T+HCKSK DDLG+HV+   Q Y FKF+PNL  +TLF+CSF W  Q +   
Sbjct: 33  MTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKS-- 92

Query: 69  FNVFDHKRDAGLCTTCTWIIHEYSMC 95
           F+++D +RD G+C  C W I     C
Sbjct: 93  FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Clc04G01425 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLL-GTTLFYCSFVWTGQHQIYWFNVFD 74
           G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W GQ +  WFN++D
Sbjct: 49  GSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQSK--WFNIYD 108

Query: 75  HKRDA---GL-CTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPS 117
             RD    G+ C  C W I +Y  C +  +  D   ICY +     S
Sbjct: 109 DDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of Clc04G01425 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-15
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 18  VTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRD 77
           +T+ C+SK+DDLG H+LL GQ++ +KFRP+   TTLF C F+W   + + WF+ +   RD
Sbjct: 45  LTISCRSKDDDLGEHLLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRD 104

Query: 78  AGLCTTCTWIIHEYSMCL 96
            G C +C W I+  S C+
Sbjct: 105 QGHCYSCNWSINADSACI 120

[Close]

BLAST of Clc04G01425 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.3e-15
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +   F+++D 
Sbjct: 48  GLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK--RFDIYDD 107

Query: 75  KRDAG----LCTTCTWIIHEYSMCLQNPKTTDGKQICYTY 111
            RD       C  C W I     C+ + ++     ICY +
Sbjct: 108 DRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Clc04G01425 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-10
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 21  HCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAG- 80
           HCKSK+DDLG   L  G+S+SF F     G TL++CSF W   ++ + F+++   RD+G 
Sbjct: 65  HCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSW--PNESHSFDIYKDHRDSGG 124

Query: 81  --LCTT--CTWIIHEYSMCLQNPKTTDGKQICYTY 111
              C +  C W I     C  N +T     +CY +
Sbjct: 125 DNKCESDRCVWKIRRNGPCRFNDETKQ-FDLCYPW 156

[Close]

BLAST of Clc04G01425 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. ExPASy TrEMBL
Match: A0A5A7U5V5 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00400 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. ExPASy TrEMBL
Match: A0A5A7UYG6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001800 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+PK   GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDPK-NPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.7e-48
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           GIPVTVHCKSKNDDLG+HVL LGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD 
Sbjct: 43  GIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDD 102

Query: 75  KRDAGLCTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPSIM 119
           KRDAG CTTC WIIHEYSMCLQ+P T  GK ICY YGDKEPSI+
Sbjct: 103 KRDAGKCTTCRWIIHEYSMCLQDP-TNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01425 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 9   LQHVLIGIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYW 68
           + +++ G P+T+HCKSK DDLG+HV+   Q Y FKF+PNL  +TLF+CSF W  Q +   
Sbjct: 33  MTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKS-- 92

Query: 69  FNVFDHKRDAGLCTTCTWIIHEYSMC 95
           F+++D +RD G+C  C W I     C
Sbjct: 93  FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Clc04G01425 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLL-GTTLFYCSFVWTGQHQIYWFNVFD 74
           G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W GQ +  WFN++D
Sbjct: 49  GSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPGQSK--WFNIYD 108

Query: 75  HKRDA---GL-CTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDKEPS 117
             RD    G+ C  C W I +Y  C +  +  D   ICY +     S
Sbjct: 109 DDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of Clc04G01425 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +   F+++D 
Sbjct: 48  GLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK--RFDIYDD 107

Query: 75  KRDAG----LCTTCTWIIHEYSMCLQNPKTTDGKQICYTY 111
            RD       C  C W I     C+ + ++     ICY +
Sbjct: 108 DRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Clc04G01425 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-15
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 16  IPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHK 75
           +P+  HCKSKNDDLG   + +  ++SF+FRP++ G TLF+C F+W    +++WF+++   
Sbjct: 40  LPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW--DKELHWFDIYKQS 99

Query: 76  RDAGL----CTTCTWIIHEYSMCLQNPKTTDGKQICYTYGDK 114
           RD       C  C W I +   C  N K ++   +C  +  +
Sbjct: 100 RDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVCLPWNSQ 138

[Close]

BLAST of Clc04G01425 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 74.7 bits (182), Expect = 5.5e-14
Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 15  GIPVTVHCKSKNDDLGLHVLLLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDH 74
           G+P+  HCKS+ DDLG   L  G+S+SF F P++ G TLFYC F W  +  I  F+++  
Sbjct: 37  GLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQ 96

Query: 75  KRDAGL----CTTCTWIIHEYSMCLQNPKT 101
            RD       C  C W I +   C    KT
Sbjct: 97  SRDKEFQEFGCKKCEWKIRKNGPCKFYKKT 124

The following BLAST results are available for this feature:

BLAST of Clc04G01425 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55015.2	3.2e-48	84.62	hypothetical protein Csa_011982, partial [Cucumis sativus]	[more]
KGN55010.2	3.2e-48	84.62	hypothetical protein Csa_012448 [Cucumis sativus]	[more]
KAA0063208.1	1.2e-47	83.65	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]
TYK13716.1	1.2e-47	83.65	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0059246.1	1.2e-47	83.65	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]

BLAST of Clc04G01425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	1.6e-18	46.51	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	1.5e-16	42.06	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	2.2e-15	44.87	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
Q9FMQ4	8.3e-15	40.00	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLQ5	6.1e-10	36.84	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of Clc04G01425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQ97	5.9e-48	83.65	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5A7U5V5	5.9e-48	83.65	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00...	[more]
A0A5D3CTD8	5.9e-48	83.65	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5A7UYG6	5.9e-48	83.65	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00...	[more]
A0A5D3CQA2	7.7e-48	83.65	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]

BLAST of Clc04G01425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.1e-19	46.51	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.1e-17	42.06	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	5.9e-16	40.00	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	2.2e-15	34.31	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	5.5e-14	40.00	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 17..108 e-value: 1.4E-23 score: 83.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 16..95
None	No IPR available	PANTHER	PTHR31232:SF53	S-PROTEIN HOMOLOG 29-RELATED	coord: 16..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G01425.1	Clc04G01425.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen