Clc04G01390 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G01390
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr04: 3764336 .. 3766843 (-)
RNA-Seq Expression	Clc04G01390
Synteny	Clc04G01390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAATGAACTGTTTACGAATTAAGTATTTAGCATGCACTTGTTTTGCAAGTGCTTAAATTCCATTCCAATCAACTATAATAAAATAAGATCACAAACAACTTATAATTTCGCTCCTTTGCTCTCACTCTCCCTCTCTCGGGGTAATGCGAAGGCAATATCTTCCGCTTAAGTTGTTGTTTCCAACATGCTCGTAGAATACTTAAAAACCTTGAACAAACCGTTATATAATTGAAATATTTCTGTGGACGTCGAATTCCATCTTCTATATCGAAGGCGCCTTTTCCAGTCGTTCACCAGAAAAAAAAAAAAAAAAAACAAACAAAAAGATATTATCCTTCTTCATCTTGATCAACTTTGGATCTCGAGGGTCGGTATTTTTAATGATCGAATCGATGTAATTCCAAATGTATAAGAATTTCACACACGAACTTCTGCATGTAATGATCGTAAAAAATGTCGATACGATTTGTGGTGTGCTTTCTCATATACGTTGATCGAATAACCATATGACAAGAGAAATTTCTTCAAACGCAACGTATGAAGCATTTAAGGGTCGGGACTAAAGTTACTCAAATATGACAAGTGAAGATCAGACTAAACTATTAGTCGATAAGTCTCAATGACAAAAGGCTTGGTTGATATTTGAAATAAGAGTGTAGGAACTAGATTTTTATTCGACTAACCATTCGAATAAATGTTTCAAAAGTGTTGCCAAGTAACATTTTAATGAACCAAAGTACCGATTATAAACATATCCTCCAACTTATGAGAATTAAAGATTTAAAAGTTTGGAGACACTCTTCCATTCCAGATTCTGCCATACGATTTAAAACCCTTTCATATATCCAGGTACTAATAGTAGTCCACAGTTATTTTTCTTTAGAAAAACATGTTCATCTTACAAAGTTTCTCATTGAGACATACGGCAGACGCAACATTGTTCATGAAATAATAATAAGATTTTTCAAAATACAAGTTTATGTTTCAAATATGTTACATTTATTTCAAAAATTGCTGGTTAAGATATTTTATTTTCAGGGAAAACAATTAACATCATCAAGAAAATAAAAAACACAAAACACATCTGACATATAAAATATAAATTTTTTATGTGGTATTGTATTTGAAAACTTCCCAGAAAATATCTCTCTTTCTTTAATCATACACAATTTAACCTAAGAAACAATTTTTTTTTTTTTTTTTGACCAAAAAAAAGACAAAAAGGTAATAATTTTGAAAACATAATTAAACCTTCATTGATTACAAGGTTATAAAATTGAACATTTATTTATTATTTTTTTTTTCTGTTTAATCAGTTTTAAAGATTCAATGTTCTCTCCTCTTTTTTTAAAGCCAATTAAATAGCACCAATTTATGCCAACCAAAGGAAATTGTATTCGTTTCTTTTGTTTTGTACAAACGTTTGAACAATAACAACGATGATAAAAATGGTAATTTAATTCCACCGAACCTTTTGGCTACAAACGATAAGACAATTTATTTCTTTTCTCCGACCCTATAAATATACAAACTATTTCTAGCACTTCCCATTCATTCCAATACACAATCAAAGGCATAAAGCGTTCATATTCTTCTCTCTCCGTTTGTTTTTCAACTGACGCCGTAAGCATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAA

mRNA sequence

ATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAA

Coding sequence (CDS)

ATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAA

Protein sequence

MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPSIILHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPSIM

Homology

[Close]

BLAST of Clc04G01390 vs. NCBI nr
Match: KGN55015.2 (hypothetical protein Csa_011982, partial [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 7.9e-66
Identity = 122/147 (82.99%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLILF  +L AIQG+  I P TTV I NQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD KRDAG CTTCTWIIHEYS
Sbjct: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIIL 148
           MCLQ+PK   GK+ICYNYGDKEP II+
Sbjct: 160 MCLQDPKN-PGKEICYNYGDKEPGIIV 185

[Close]

BLAST of Clc04G01390 vs. NCBI nr
Match: KAA0045871.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 7.9e-66
Identity = 123/150 (82.00%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLILF  +L AIQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIILHAI 151
           MCLQ+PK   GK ICYNYGDKEPSI L  I
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIALDNI 149

[Close]

BLAST of Clc04G01390 vs. NCBI nr
Match: KGN55010.2 (hypothetical protein Csa_012448 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 2.3e-65
Identity = 121/147 (82.31%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV I NQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD KRDAG CTTCTWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIIL 148
           MCLQ+PK   GK+ICYNYGDKEP II+
Sbjct: 121 MCLQDPKN-PGKEICYNYGDKEPGIIV 146

[Close]

BLAST of Clc04G01390 vs. NCBI nr
Match: TYK08032.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-65
Identity = 119/146 (81.51%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +LH IQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CS  WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01390 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-65
Identity = 120/146 (82.19%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01390 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-20
Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 12  LILFFTSLHAIQGAFLIPP---ETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSY 71
           ++ FF  L    G   +PP    T VT+ N I  G P+T+HCKSK DDLG+HV+P  Q Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  SFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC 123
            FKF+PNL  +TLF+CSF W  Q +   F+++D +RD G+C  C W I     C
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Clc04G01390 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.9e-19
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 31  ETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLL-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPS 145
           GQ +  WFN++D  RD    G+ C  C W I +Y  C +  +  D   ICY++     S
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of Clc04G01390 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.7e-16
Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           M +S  + + L I+ F  + +  G +    +T VT+ N I     +T+ C+SK+DDLG H
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHG-YNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           +L  GQ++ +KFRP+   TTLF C F+W   + + WF+ +   RD G C +C W I+  S
Sbjct: 61  LLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQGHCYSCNWSINADS 120

Query: 121 MCL 124
            C+
Sbjct: 121 ACI 120

[Close]

BLAST of Clc04G01390 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.8e-16
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 34  VTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQ 93
           V I N++  G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTADGKQICYNY 139
              F+++D  RD       C  C W I     C+ + ++     ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Clc04G01390 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.4e-11
Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 33  TVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQH 92
           TV I N +   + +  HCKSK+DDLG   L  G+S+SF F     G TL++CSF W   +
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSW--PN 108

Query: 93  QIYWFNVFDHKRDAG---LCTT--CTWIIHEYSMCLQNPKTADGKQICY 137
           + + F+++   RD+G    C +  C W I     C  N +T     +CY
Sbjct: 109 ESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQ-FDLCY 154

[Close]

BLAST of Clc04G01390 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.8e-66
Identity = 123/150 (82.00%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLILF  +L AIQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIILHAI 151
           MCLQ+PK   GK ICYNYGDKEPSI L  I
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIALDNI 149

[Close]

BLAST of Clc04G01390 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 120/146 (82.19%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01390 vs. ExPASy TrEMBL
Match: A0A5D3C9Q3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001780 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 119/146 (81.51%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +LH IQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CS  WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01390 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  ++ AIQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01390 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 120/146 (82.19%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV IVNQIEYGIPVTVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+P T  GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDP-TNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01390 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-21
Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 12  LILFFTSLHAIQGAFLIPP---ETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSY 71
           ++ FF  L    G   +PP    T VT+ N I  G P+T+HCKSK DDLG+HV+P  Q Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  SFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC 123
            FKF+PNL  +TLF+CSF W  Q +   F+++D +RD G+C  C W I     C
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Clc04G01390 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-20
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 31  ETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLL-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPS 145
           GQ +  WFN++D  RD    G+ C  C W I +Y  C +  +  D   ICY++     S
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of Clc04G01390 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-18
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 30  PETTVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWT 89
           P TTV I N +   +P+  HCKSKNDDLG   + +  ++SF+FRP++ G TLF+C F+W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 90  GQHQIYWFNVFDHKRDAGL----CTTCTWIIHEYSMCLQNPKTADGKQIC 136
              +++WF+++   RD       C  C W I +   C  N K ++   +C
Sbjct: 86  -DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVC 132

[Close]

BLAST of Clc04G01390 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-17
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 34  VTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQ 93
           V I N++  G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTADGKQICYNY 139
              F+++D  RD       C  C W I     C+ + ++     ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Clc04G01390 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-16
Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPETTVTIVNQIEYGIPVTVHCKSKNDDLGLH 60
           MGS  T  L  +++ F S      A +    T+V I N +  G+P+  HCKS+ DDLG  
Sbjct: 1   MGSLETCLLFFVMVMFMS------AIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQ 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGL----CTTCTWII 120
            L  G+S+SF F P++ G TLFYC F W  +  I  F+++   RD       C  C W I
Sbjct: 61  SLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWKI 120

Query: 121 HEYSMCLQNPKT 129
            +   C    KT
Sbjct: 121 RKNGPCKFYKKT 124

The following BLAST results are available for this feature:

BLAST of Clc04G01390 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55015.2	7.9e-66	82.99	hypothetical protein Csa_011982, partial [Cucumis sativus]	[more]
KAA0045871.1	7.9e-66	82.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KGN55010.2	2.3e-65	82.31	hypothetical protein Csa_012448 [Cucumis sativus]	[more]
TYK08032.1	3.0e-65	81.51	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0063208.1	3.0e-65	82.19	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]

BLAST of Clc04G01390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	2.3e-20	45.61	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	9.9e-19	41.18	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	2.7e-16	36.59	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
Q9FMQ4	7.8e-16	39.45	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLQ5	4.4e-11	35.78	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of Clc04G01390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWM4	3.8e-66	82.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CQ97	1.5e-65	82.19	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3C9Q3	1.5e-65	81.51	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00...	[more]
A0A5D3CTD8	1.5e-65	81.51	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3CQA2	1.5e-65	82.19	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]

BLAST of Clc04G01390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.7e-21	45.61	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	7.0e-20	41.18	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	5.0e-18	37.27	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	5.6e-17	39.45	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.8e-16	36.36	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..137 e-value: 4.4E-26 score: 91.4 coord: 161..265 e-value: 4.4E-26 score: 91.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 8..127
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 149..255
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 8..127
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 149..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G01390.2	Clc04G01390.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen