Clc03G07940 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCCAAGAAAGCAAGATGATAAAGGAGAGGCCATTAACCGACCCAAGGCCTTAGAAGCCTCGAGAGGCAGATCCTATGGGTCAGCCACGGAGCACGTAAGAGTATGAGTAAGTCGACCCAATCTCTAATAAGATGGTGATACTTAACATAACAAAGAGGTTGGTGGCGCTTTATTCCATAGCACGCTACAGAAAGTGGGCCCCACATTCCTTAGAAACATGTAATAATTGTCGTTTTGCACGTTTTATTTCGACCGTTAGAACGACTTTCCGTTTATTTTGACGGAATTACAAAACGGTCGGTCATAAAGTCCATAGTTTCACGGCACAAAAGAAAACAGACTCTCGAATGTACCATAGTACCCTCAGAACAGTAAGTCCCCATTTCAGTAAAACCGAATGGTATTTTGATCATTTAACATTCCTCCATCTAAAACTTCGTTATTAAAACTCCTTTGAGTTTTTGGGCGTCGAATTCTACAATGGAAGGCCAGCAGGTTTTAGAGAATTTGGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAGCGCCGCCATTGCCGTCTCCACCGCCACCGCCCGTCGAAAAACCCACTCAAAACGGCTTCGTTGAGCCTCCTGCAGAAGAAATTGCGACACCCATTACTCAAATTGAGCAAAATGATGTTGGTGATGAGAAGAAGATTGAAAATGGTGGCGGGGTTGGGATAAAAACAGAGGAGAAAGAACAGAGGAAGTAG ATGACTCCAAGAAAGCAAGATGATAAAGGAGAGGCCATTAACCGACCCAAGGCCTTAGAAGCCTCGAGAGGCAGATCCTATGGGTCAGCCACGGAGCACGTTTTAGAGAATTTGGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAGCGCCGCCATTGCCGTCTCCACCGCCACCGCCCGTCGAAAAACCCACTCAAAACGGCTTCGTTGAGCCTCCTGCAGAAGAAATTGCGACACCCATTACTCAAATTGAGCAAAATGATGTTGGTGATGAGAAGAAGATTGAAAATGGTGGCGGGGTTGGGATAAAAACAGAGGAGAAAGAACAGAGGAAGTAG ATGACTCCAAGAAAGCAAGATGATAAAGGAGAGGCCATTAACCGACCCAAGGCCTTAGAAGCCTCGAGAGGCAGATCCTATGGGTCAGCCACGGAGCACGTTTTAGAGAATTTGGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAGCGCCGCCATTGCCGTCTCCACCGCCACCGCCCGTCGAAAAACCCACTCAAAACGGCTTCGTTGAGCCTCCTGCAGAAGAAATTGCGACACCCATTACTCAAATTGAGCAAAATGATGTTGGTGATGAGAAGAAGATTGAAAATGGTGGCGGGGTTGGGATAAAAACAGAGGAGAAAGAACAGAGGAAGTAG MTPRKQDDKGEAINRPKALEASRGRSYGSATEHVLENLDSLWFFATVFSNRAPPLPSPPPPPVEKPTQNGFVEPPAEEIATPITQIEQNDVGDEKKIENGGGVGIKTEEKEQRK Homology
BLAST of Clc03G07940 vs. NCBI nr
Match: XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 7.4e-26 Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of Clc03G07940 vs. NCBI nr
Match: XP_023520136.1 (uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17 Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Clc03G07940 vs. NCBI nr
Match: KAG6583945.1 (hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.7 bits (234), Expect = 5.3e-16 Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Clc03G07940 vs. NCBI nr
Match: KAG7019562.1 (hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-14 Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Clc03G07940 vs. NCBI nr
Match: XP_023000977.1 (uncharacterized protein LOC111495257 [Cucurbita maxima]) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Clc03G07940 vs. ExPASy TrEMBL
Match: A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Clc03G07940 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Clc03G07940 vs. ExPASy TrEMBL
Match: Q58A15 (Uncharacterized protein 7G02 (Fragment) OS=Cucumis melo OX=3656 GN=7G02 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Clc03G07940 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13 Identity = 47/83 (56.63%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Clc03G07940 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13 Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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