
Clc03G07345 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAAGAAGTGGGTGCGAAGAAAAGCAAGAGCCATGGGAATAACGCTACCAGGTGGGCGATTTTCAAGCGATCCTTGAGGAGAGAATCGCGAAAAATGAAGCTATTGGGCTCCGGGTTCAAGTGGAAAAGACTGACGAATTTGCAGATTTCTTTTTTGGATAATTTTCTTTTCAAGATTGTTTCTATGTTGGAGGGTGTAGTTCTTGTCTCTACACTCTGTTTCTTCTTCCTCTGTTTTGGCTGTCACTTTTGA ATGGAGGAAGAAGTGGGTGCGAAGAAAAGCAAGAGCCATGGGAATAACGCTACCAGGTGGGCGATTTTCAAGCGATCCTTGAGGAGAGAATCGCGAAAAATGAAGCTATTGGGCTCCGGGTTCAAGTGGAAAAGACTGACGAATTTGCAGATTTCTTTTTTGGATAATTTTCTTTTCAAGATTGTTTCTATGTTGGAGGGTGTAGTTCTTGTCTCTACACTCTGTTTCTTCTTCCTCTGTTTTGGCTGTCACTTTTGA ATGGAGGAAGAAGTGGGTGCGAAGAAAAGCAAGAGCCATGGGAATAACGCTACCAGGTGGGCGATTTTCAAGCGATCCTTGAGGAGAGAATCGCGAAAAATGAAGCTATTGGGCTCCGGGTTCAAGTGGAAAAGACTGACGAATTTGCAGATTTCTTTTTTGGATAATTTTCTTTTCAAGATTGTTTCTATGTTGGAGGGTGTAGTTCTTGTCTCTACACTCTGTTTCTTCTTCCTCTGTTTTGGCTGTCACTTTTGA MEEEVGAKKSKSHGNNATRWAIFKRSLRRESRKMKLLGSGFKWKRLTNLQISFLDNFLFKIVSMLEGVVLVSTLCFFFLCFGCHF Homology
BLAST of Clc03G07345 vs. NCBI nr
Match: KAG6583910.1 (hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32 Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 0
BLAST of Clc03G07345 vs. NCBI nr
Match: KAG7012520.1 (hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121.7 bits (304), Expect = 3.0e-24 Identity = 64/78 (82.05%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Clc03G07345 vs. NCBI nr
Match: KAG7019527.1 (hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23 Identity = 63/81 (77.78%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of Clc03G07345 vs. NCBI nr
Match: EOY27743.1 (Uncharacterized protein TCM_029517 [Theobroma cacao]) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-14 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Clc03G07345 vs. NCBI nr
Match: XP_017978435.1 (PREDICTED: uncharacterized protein LOC18596529 [Theobroma cacao]) HSP 1 Score: 87.0 bits (214), Expect = 8.3e-14 Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of Clc03G07345 vs. ExPASy TrEMBL
Match: A0A061GEB5 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029517 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Clc03G07345 vs. ExPASy TrEMBL
Match: A0A6J1B6L1 (uncharacterized protein LOC110424571 OS=Herrania umbratica OX=108875 GN=LOC110424571 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.0e-14 Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of Clc03G07345 vs. ExPASy TrEMBL
Match: A0A1R3FVP9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13 Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of Clc03G07345 vs. ExPASy TrEMBL
Match: A0A5D2NM64 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G045600v1 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.4e-13 Identity = 40/69 (57.97%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of Clc03G07345 vs. ExPASy TrEMBL
Match: A0A1R3I7M5 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_24713 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.4e-13 Identity = 41/76 (53.95%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Clc03G07345 vs. TAIR 10
Match: AT5G46295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 5.0e-09 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Clc03G07345 vs. TAIR 10
Match: AT1G06475.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 3.4e-05 Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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