Clc03G06590 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G06590
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein
LocationClcChr03: 6401871 .. 6405927 (+)
RNA-Seq ExpressionClc03G06590
SyntenyClc03G06590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCGCCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCTCCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACCCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGAGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAGAGCAGATCCTTGTCTTCGCTCTCTGTCTCTGAAACTACTAACATTATACCTAACAAGTGATTCTGAAGAGAAATTTGCATGTACATAGACTCTGAGATCTGGTCGCTCGCTGATCTTATTTTTTTGCTCCTTCGATTGATTTTTCCTCTTGAAATTTGCTGTGTTAGTGTTAATTTTGGATATTAGATCTTCTTCACATTCTATATCAGATTAATTGTCGCCAATTTCAGATTCGTATTATACAGTTTTATTTTGTTGAGATGTTTAATTTGATGATACATACTTGCAAATGATTTCGTTTTGGATTCCATTTTTGAAGATAACGAGTATTTACTCTTTTTGGATAATATAGTGAGTATTTTGCTCCATAAAACCTCGATAATAATTCCATTGGTTTTGGTTTGATACAATCCTTACAAGTAATTCCATTATCGGGGCTATTTATGGAGCTTTTATCAGGTAATTGAAAACTGAATTATACTTAAAATTATATTAAATTCTAACTTTCTTCAAACTATATAATATATCAATGGATTTCATACGGTTTACAAAAAAATAAGACAAAGAGAGGGAGGAAAGGAAGCCGTCTCCATCTCTCTCTCTCTCTTATCCCCACCATTTTCATATTCTTCAGTTTTAGAAATTTGAGCCTTCATTTGAGGTAGGTACAGAGAGAGAGACAAAGGGACAGGTTGCTTCCCATTTTCCAAGTGAACTTTTGTTTTGTTATATCTAAAAACAATTACATTAAAATATCATTTTGATCTTTCTTAGAACTTAATTTTCAATAAAATTTAAATTTAATTTCTACTATTAATCTATTGTCATTTTTTCAGAAACCTTTTACCATAAATTTTTAAAATATATACTTTCATATTGTATTTTATTGCAGGAGAATTATTATTATTATTTAAGCTATTTTGATAAAATATGACTGTGGGATTAGATTTAAGATTTATGGTAAGTGCATGTACTAAAATTGGGTATTTACCATTACAAGGATTAAAATAGAACTCTAAAGTACAAAAACCAAAGTGATATTTTAACTAAATAATTATATGGATATTTTATAAATGCCAATTTGAGATACTTGATGAAGCCTGGAATAGGGTGTTCCAACTACCAAATAAATTTATAATCTCCAAACCTGGGAAGTGGAATTTATTGCCCAATTTTGTTCAAACACAATAGTCGTATTATAGGTCGAACATAAGGAGCAATTGAACATTTTTATCAAACAGTTGCTGTCTGAGGGTAACCAATTGGGGGAGGGGGTTAGAATTGTTTTGTTGCAAATAAATATAAATAGCCTAAAAGAAAATCGCAAAGCAATGGTTTAAAAATTAATGAGACAAAGCTTAACTTGGGTTGCAACATAATTTTCCATATTTGATTCTTGAATTCTCATTACCAAAATCAATCAATTGTTTACTCCTACGCAATTTAATTAGAAAAGTTCTTCAAATTGTTCTAAACAACTAATTAATCTAATTCGAAAAGATGAAATGTATGCATGTTCGAATTATCCTAGTTGCATTAAGATCTAAGGAATGTTAGGAGGAACATTTAACCTAGTTGAATATTTGTTTGGTTCAATCCTAAGTTGATTAGAACAATAAATTTGATTTGCAAGGTAACCTAACCTATCTATATTAAGTGTTACACATCGTACATTAATCAAAGCAATGAATGTAATTAAAATCCTAAAACACATGTTAATATAGTCTTAATCTAAAGCAAAACAGAATTGAACTAGTAGTACAAGATAGAATTTGACTAAAAAACTCACAAATACATCAAAGTTGGGAAAACTCCTAAAAATTCAAGCTAGAAAGCATAACTTAGCTCATAATTGACATGAAGATCGACGAGGTAGAGTTTAGATACATGAAAGATGAAAAAGTAAGTGAAAAGAATAGAGAAAGATGCTAGAAGTCGGTTGAAGTGGCAAACCCCTCGACCTAGGTGACTGAAAGCTTCTTTTATAAAATCGTGATGGCGCTGCAGAGTTGACGAAAAACCTCGCGCGAACAATTTCGGAGTGTCGCGGCGCCAAGCTTTCTCCAAATCTGAAGCTCTCGAGAAAAGCTTCAAGGCGGCGACTAAGCAGTGACATTTTGGTCATTTTGCCTCTCTCTTCCTCAATTGATGCAATTCAGGTTTGTTTTGGCCCGTTTTAGCTCAATTTCAGCTGTAGTGTTTGGTTCTACCTTCAAGTGCTTAAAACCTATCAAATAGCCAAATAAACACATAAAATCTAAGAACAATCTTGAATTAAGCGGAGCGAAATAACACATTTTCAGTGATATCAAAACCTAATTAAAACTGTAGTATTCATAGGTTGGGTCGATCCATAGGAAGTATTATGTTTTCCTCTAATCAATTATCATAGTTCTTACACAATCGAGGAGGAGGGAGTTTAATTTGTTTGTTTGTAAGAAGAATGTAGATAGTATAAAAATGAAATAGCGTAAAAAGTAAAGGTAAGAATTGAAATGAAATATAAATGAGAAAAGTCTAGCTCAGGTAGTCGGATCCACCAAATTAGTTTAGTTGTTGATTGGACCCTAAGAGTAATCATCAAAATCATGCAATAGCCGACTTGTCCGGTAGTGCCATAACAAGCGTCCTAGGACATTAATTAAGACGCTTGATTAAATGAAATGCACGGTGAGTTAGTTATGAACACGTTCCATAAACATCTCACACTTACATTAGGATTAAGGGGAAAGCTAAGACGATTAGTTACTAAGTTATGCTTAAGTAGACCAACCAATCTTATTCTTGAACTAACCAATCATGCAATGTTGTAAAAAGACCACCATAAATATCAATCAATTTACACAAAGCATCCTTTGATTTATGCTATTAAAGATTAACACATAACTAAATATCACAAATTGTGAGTCAATTACTAGCAAAGCAATGAAAATATACAAGGGTGATCAATCCATATATAATCCAAAACATAGAAATTTATATACATTCACAAATCACAAGTACTCATGAGTTTAAGGGCTCAATTTTTATTATTTGGGTGTCCAATTTCTACGACTATTTTAAGTTGAAGGGTCAAATTTTAACACATGTAGAAGTTTGAGAGCCCATTTTTTAAATACAACTGAAAGTTTGATGGTATAATGACTTGTTTTAATTCAATGAATTAAACCTTGAATCGACAGAAATTGTGTTATTCTTTTGGAATCATAAACTACAAAGATTGAGAGAGTCCTTTAAAGAAGTATTGTCTATCACATGGATATATATCGGCAAATGCCCACATGCAACTACCCACTAACCACTAATTTAGGTAACTACCCACATCTCGGGTAACTACCAAATCTCGGATAACACCTATAATTGTCTCTTCAATACTACACTAATCATCACCATATATACAACAATAGCAATTATCAATTACTTAAATTATACGAATCAATATTAGAAATTAAAATTTATAACCCTTGTTGAAACTAATGTCTTCGAAACCTCTTCCCATGGAATCTTCATCATCGATTTCTTCATCTTCTTCTTCCGTGTTCGGTTGACCGTCGGAGGTGGGACTGGTTCGACGACTCCGGAGCATTCTCCGATTCCAAGGGTGACGACATTCCTCACTCCACCTCTAAAGGTTATTTTCACTTTCGAACCGCCATAA

mRNA sequence

ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCGCCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCTCCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACCCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGAGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAAGTTGACGAAAAACCTCGCGCGAACAATTTCGGAGTGTCGCGGCGCCAAGCTTTCTCCAAATCTGAAGCTCTCGAGAAAAGCTTCAAGGCGGCGACTAAGCAGTGACATTTTGGTCATTTTGCCTCTCTCTTCCTCAATTGATGCAATTCAGAAATTAAAATTTATAACCCTTGTTGAAACTAATGTCTTCGAAACCTCTTCCCATGGAATCTTCATCATCGATTTCTTCATCTTCTTCTTCCGTGTTCGGTTGACCGTCGGAGGTGGGACTGGTTCGACGACTCCGGAGCATTCTCCGATTCCAAGGGTGACGACATTCCTCACTCCACCTCTAAAGGTTATTTTCACTTTCGAACCGCCATAA

Coding sequence (CDS)

ATGGCCATTCCCTCATTCGCCGCCGTCTTCTCCTCCCTCGCCGTCATTCTCCTCGCCGGAATCTCAAATGCCAGGGACCTACGTCCATCGGAGCACGGCTTAGAGTACCAAAACCCTGGCGCTATGGAAAATTCCTCTCCACAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCTGACGTCGCGCTTCCGAAGGCGATGAACACTAGCCTTCCGCCGCAGTGGTGGACCCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGAGGCGGAGATCACATTCGCGGCGCATTGCTTGTGGCAAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTCATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAAGTTGACGAAAAACCTCGCGCGAACAATTTCGGAGTGTCGCGGCGCCAAGCTTTCTCCAAATCTGAAGCTCTCGAGAAAAGCTTCAAGGCGGCGACTAAGCAGTGACATTTTGGTCATTTTGCCTCTCTCTTCCTCAATTGATGCAATTCAGAAATTAAAATTTATAACCCTTGTTGAAACTAATGTCTTCGAAACCTCTTCCCATGGAATCTTCATCATCGATTTCTTCATCTTCTTCTTCCGTGTTCGGTTGACCGTCGGAGGTGGGACTGGTTCGACGACTCCGGAGCATTCTCCGATTCCAAGGGTGACGACATTCCTCACTCCACCTCTAAAGGTTATTTTCACTTTCGAACCGCCATAA

Protein sequence

MAIPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAFIYFFKFRKQKLTKNLARTISECRGAKLSPNLKLSRKASRRRLSSDILVILPLSSSIDAIQKLKFITLVETNVFETSSHGIFIIDFFIFFFRVRLTVGGGTGSTTPEHSPIPRVTTFLTPPLKVIFTFEPP
Homology
[Close]
BLAST of Clc03G06590 vs. NCBI nr
Match: XP_038895122.1 (uncharacterized protein LOC120083432 [Benincasa hispida])

HSP 1 Score: 250.0 bits (637), Expect = 2.2e-62
Identity = 130/150 (86.67%), Postives = 136/150 (90.67%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD
Sbjct: 8   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 67

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLPPQWW RSHRNRSGAAADGGGGDHIRGALLVASLVCGIIG+SLLIASAF
Sbjct: 68  VALPKAMNTSLPPQWWNRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGISLLIASAF 127

Query: 123 IYFFKFRKQKLTKNLARTISECRGAKLSPN 153
           IYFFKFRKQ  + +   ++S      + PN
Sbjct: 128 IYFFKFRKQSRSSS---SLSVSETTNIIPN 154

[Close]
BLAST of Clc03G06590 vs. NCBI nr
Match: KAG6583852.1 (hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019473.1 hypothetical protein SDJN02_18434, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-54
Identity = 114/129 (88.37%), Postives = 120/129 (93.02%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           I + AAV+ S+AVI LAG SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7   IAAVAAVYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLP QWW RSHR+RSGAAADGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67  VALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126

Query: 123 IYFFKFRKQ 132
           IY FKFRKQ
Sbjct: 127 IYVFKFRKQ 135

[Close]
BLAST of Clc03G06590 vs. NCBI nr
Match: XP_022927447.1 (uncharacterized protein LOC111434271 [Cucurbita moschata])

HSP 1 Score: 222.6 bits (566), Expect = 3.8e-54
Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           I + AA++ S+AVI LAG SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7   IAAVAAIYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLP QWW RSHR+RSGAAADGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67  VALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126

Query: 123 IYFFKFRKQ 132
           IY FKFRKQ
Sbjct: 127 IYVFKFRKQ 135

[Close]
BLAST of Clc03G06590 vs. NCBI nr
Match: XP_023519911.1 (uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.2 bits (565), Expect = 4.9e-54
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           I + AA++ SLAVI LAG SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7   IAAVAAIYCSLAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLP QWW RSHR+RSGAA DGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67  VALPKAMNTSLPSQWWNRSHRDRSGAAGDGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126

Query: 123 IYFFKFRKQ 132
           IY FKFRKQ
Sbjct: 127 IYVFKFRKQ 135

[Close]
BLAST of Clc03G06590 vs. NCBI nr
Match: XP_023000949.1 (uncharacterized protein LOC111495232 [Cucurbita maxima])

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-53
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           I +FAA++ SLAVI LAG SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 6   IAAFAAIYCSLAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 65

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLP QWW RSHR+RS AAADGG GDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 66  VALPKAMNTSLPSQWWNRSHRDRSEAAADGGSGDHIRGALLVASLVCGVIGVSLLIASAF 125

Query: 123 IYFFKFRKQ 132
           IY FKFRKQ
Sbjct: 126 IYVFKFRKQ 134

[Close]
BLAST of Clc03G06590 vs. ExPASy TrEMBL
Match: A0A6J1EH69 (uncharacterized protein LOC111434271 OS=Cucurbita moschata OX=3662 GN=LOC111434271 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.8e-54
Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           I + AA++ S+AVI LAG SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 7   IAAVAAIYCSVAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 66

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLP QWW RSHR+RSGAAADGGGGDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 67  VALPKAMNTSLPSQWWNRSHRDRSGAAADGGGGDHIRGALLVASLVCGVIGVSLLIASAF 126

Query: 123 IYFFKFRKQ 132
           IY FKFRKQ
Sbjct: 127 IYVFKFRKQ 135

[Close]
BLAST of Clc03G06590 vs. ExPASy TrEMBL
Match: A0A6J1KLE3 (uncharacterized protein LOC111495232 OS=Cucurbita maxima OX=3661 GN=LOC111495232 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 5.3e-54
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           I +FAA++ SLAVI LAG SNARDLRPSEHGLEYQNPGA+ENSSP MQSFFKGNSWSSSD
Sbjct: 6   IAAFAAIYCSLAVIFLAGGSNARDLRPSEHGLEYQNPGAIENSSPDMQSFFKGNSWSSSD 65

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLP QWW RSHR+RS AAADGG GDHIRGALLVASLVCG+IGVSLLIASAF
Sbjct: 66  VALPKAMNTSLPSQWWNRSHRDRSEAAADGGSGDHIRGALLVASLVCGVIGVSLLIASAF 125

Query: 123 IYFFKFRKQ 132
           IY FKFRKQ
Sbjct: 126 IYVFKFRKQ 134

[Close]
BLAST of Clc03G06590 vs. ExPASy TrEMBL
Match: A0A5D3C2L6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00520 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 113/152 (74.34%), Postives = 130/152 (85.53%), Query Frame = 0 

Query: 3   IPSFAAVFSSLA--VILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSS 62
           IPSFA ++SSLA  ++LLA +SNARDLRPSEHGL+YQNP A++NSSPQMQSFFKGNSWS+
Sbjct: 8   IPSFAVLYSSLALIILLLAPLSNARDLRPSEHGLDYQNPDAIQNSSPQMQSFFKGNSWSN 67

Query: 63  SDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIAS 122
           SDVALPKAMNTSLPPQWW RSHRNRSGA+A   GGDHIRGALLVASLVCGIIGVSLL+AS
Sbjct: 68  SDVALPKAMNTSLPPQWWNRSHRNRSGASA--AGGDHIRGALLVASLVCGIIGVSLLVAS 127

Query: 123 AFIYFFKFRKQKLTKNLARTISECRGAKLSPN 153
           AFIYFFKFRKQ  + + + ++S      +  N
Sbjct: 128 AFIYFFKFRKQSRSSSSSSSLSASETTNIIAN 157

[Close]
BLAST of Clc03G06590 vs. ExPASy TrEMBL
Match: A0A1S3BC63 (uncharacterized protein LOC103488324 OS=Cucumis melo OX=3656 GN=LOC103488324 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52
Identity = 113/152 (74.34%), Postives = 130/152 (85.53%), Query Frame = 0 

Query: 3   IPSFAAVFSSLA--VILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSS 62
           IPSFA ++SSLA  ++LLA +SNARDLRPSEHGL+YQNP A++NSSPQMQSFFKGNSWS+
Sbjct: 8   IPSFAVLYSSLALIILLLAPLSNARDLRPSEHGLDYQNPDAIQNSSPQMQSFFKGNSWSN 67

Query: 63  SDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIAS 122
           SDVALPKAMNTSLPPQWW RSHRNRSGA+A   GGDHIRGALLVASLVCGIIGVSLL+AS
Sbjct: 68  SDVALPKAMNTSLPPQWWNRSHRNRSGASA--AGGDHIRGALLVASLVCGIIGVSLLVAS 127

Query: 123 AFIYFFKFRKQKLTKNLARTISECRGAKLSPN 153
           AFIYFFKFRKQ  + + + ++S      +  N
Sbjct: 128 AFIYFFKFRKQSRSSSSSSSLSASETTNIIAN 157

[Close]
BLAST of Clc03G06590 vs. ExPASy TrEMBL
Match: A0A0A0LVV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538210 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 6.3e-47
Identity = 104/141 (73.76%), Postives = 120/141 (85.11%), Query Frame = 0 

Query: 3   IPSFAAVFSSLAVILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSD 62
           IPS AA      ++LLA +SNARDLRPSEHGL+YQNP A+ +SSPQMQSFF+GNSWS+SD
Sbjct: 8   IPSIAAAL----ILLLAALSNARDLRPSEHGLDYQNPDAIHSSSPQMQSFFRGNSWSNSD 67

Query: 63  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 122
           VALPKAMNTSLPPQW  R+HRNRSGA+A    GDHIRGALLVASLVCGIIGVSLL+ASAF
Sbjct: 68  VALPKAMNTSLPPQWSNRAHRNRSGASA--ADGDHIRGALLVASLVCGIIGVSLLVASAF 127

Query: 123 IYFFKFRKQKLTKNLARTISE 144
           IYFFKFRKQ  + + + ++SE
Sbjct: 128 IYFFKFRKQSRSSSSSVSVSE 142

[Close]
BLAST of Clc03G06590 vs. TAIR 10
Match: AT4G21740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 0 

Query: 15  VILLAGISNARDLRPSEHGLEYQ--NPGAMENSSP-QMQSFFKGNSWSSS-----DVALP 74
           +++  G S A +LRPS+HGL+YQ  +P    +S P +M+SFF G+S SSS        LP
Sbjct: 23  LVIFTGNSLAGELRPSDHGLQYQFSSPPTESHSPPGKMKSFF-GDSHSSSPPPSHPQLLP 82

Query: 75  K--AMNTSLPPQWWTRSHRNRSGAAADGGGGDHI-RGALLVASLVCGIIGVSLLIASAFI 131
           K  A +      WW      R GA   G   DH+ R   L AS++CG+ GV+LL+    I
Sbjct: 83  KATAADGGDDDSWW------RDGA---GIRRDHVMRHVFLAASIICGVSGVALLVVFTLI 139

[Close]
BLAST of Clc03G06590 vs. TAIR 10
Match: AT1G30515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-09
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0 

Query: 4   PSFAAVFSSLAVILLAGISNARDLRPSEHGLE-YQNPGAMENSSPQMQSFFKGNSWSSSD 63
           P   ++     ++L + I NAR+LRPS+HGLE Y  PG     S +M SFF     SS+D
Sbjct: 10  PPLISMLIMFIIVLESTIINARELRPSDHGLEYYYEPG----ESSEMTSFF--GPPSSND 69

Query: 64  VALPKAMNTSLPPQWWTRSHRNRSGAAADGGGGDHIRGALLVASLVCGIIGVSLLIASAF 123
           +    + ++S+ P       +  S    D    +H+   L+V SLVCG+ GV+L++ASA 
Sbjct: 70  LTSISSPSSSILPSAVKSPMKTLSKDQDDDRVMNHV---LVVGSLVCGLSGVALMVASAL 128

Query: 124 IYFFKFRK 131
           IYF  + K
Sbjct: 130 IYFLGYPK 128

The following BLAST results are available for this feature:
BLAST of Clc03G06590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895122.12.2e-6286.67uncharacterized protein LOC120083432 [Benincasa hispida][more]
KAG6583852.12.9e-5488.37hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022927447.13.8e-5487.60uncharacterized protein LOC111434271 [Cucurbita moschata][more]
XP_023519911.14.9e-5487.60uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo][more]
XP_023000949.11.1e-5387.60uncharacterized protein LOC111495232 [Cucurbita maxima][more]
BLAST of Clc03G06590 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc03G06590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EH691.8e-5487.60uncharacterized protein LOC111434271 OS=Cucurbita moschata OX=3662 GN=LOC1114342... [more]
A0A6J1KLE35.3e-5487.60uncharacterized protein LOC111495232 OS=Cucurbita maxima OX=3661 GN=LOC111495232... [more]
A0A5D3C2L61.0e-5274.34Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BC631.0e-5274.34uncharacterized protein LOC103488324 OS=Cucumis melo OX=3656 GN=LOC103488324 PE=... [more]
A0A0A0LVV56.3e-4773.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538210 PE=4 SV=1[more]
BLAST of Clc03G06590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G21740.12.7e-1040.94unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G30515.13.0e-0936.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37189CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G06590.1Clc03G06590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane