Clc03G04040 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAAGAAGGAGAAGAAGAGCGCATACGAATACTGCCTCGTCTGCAAGCTAAACCACGATCAAGGGCAGCGTCACAAGTATTTTCCCAACCACAAAAAATCTCTTTCTGCTTTTCTATCTCGGTTCGAGATCAAGCTGTCTGACGTTCGCTTTTTTCTCAACACCCCCTTTCGCCTCTCGCCCGAGTATGCTTCTCAAAATCGGTTCTGGTGCATCTTTTGCGATGTTCAAGTCGATGAGAATGATAGTTCCTTCGCATGGTATCAATCCGCGGGCTATTTTACTAACTTGTTTCTTGATTAATTACGATTCATGTGTGTGGTTGCTAGGAAATTTGGGAATCAACTCTGTCAGCTTATATGCTAATTACGGTTGTAACTCCTGTAAGGAGTCTTTTTCGCCTTCTTTAAAATGAGACTGAATTTCATCGATATAGTTTATACAAAAGAGAAGGAAAGCCATGATCAAAGCTAATGGGGTTAAAGAAAAGCCCTCCAATTAGTACGTAGTTCTGTAAAAGAGTAATTACAAAACAGGAAAACACATTGTTAAGCTTAAATTAAGAGGTAACTGTAAAAAAGATGTGATAAGGTACGGGCAGTCTCTTCCTGAACCACCAAAATTTTTGTGGCTCCTTTCCATCCAAGGACTCCATAAGAAGCTTTGGATGGTGTTGAACCCAAAGGATTTAAGTTCTCAATGAGAGCAAAGTATGCAGTACCATTTCACAAAGACCCTTTGACTATATTTAGTAAGGCCATTGGACTTAGTGTAACAGTGTAATATATCTGTAAACTTTTGTAATGGTATGGTTAGAGAGCTTCGGGATTTAGTGTATCTTACTTGGGGTTTTAAGAATGCCATTTTGCAATTGATCTTCATTTAGAATTAACGCTAAATGGGGAGGATTTTTGAAGTTCTGTTGGCTGACATCTAGACTTGGTAGGTACATTGCATTCTTTTCCTTTGTTCGTGCAGTAGTAGTTATTCTTCATGCATATAGCATTTTTCATGTTTTACTTTCATTATCTCATGTTTTAAGATTTTGTAACAGTAGCAATGCAATTAAACACCTGGCCAGCGCGGATCATCTGAAGAATTTGAAGCATTTCTTCTGGAAGTATGGTGGTGATGTGGAACGTCTGGATGATTATAGAATTTTGGAAGCTGATGTAGCTAAGGTAACCATGAGCCTTTACTTTTTCTAAGGTTCAATTTTATTTGAACTATATTATCCAGGGGTATCATGCAATCCACATTTAGTTCTCTTATAATCAATAGAATCAACAAAGAGAACAAACATAGCAATAAAGCATCCTATCTTCTTTCCTTTTTGTCGTGTGATTTATCAACAGCGAGAAACAGAACTTGATTTCTACTGTGACTAGGCTACTAATTTGAATCAATGTTTGTCAATGACAGTGGGAGAAGAAGTGCAAAGTACAAAGCATAGCTGCTTCTTCCGGTCTTGGACCTACAAATGATATCCAAAATCAAGTCCAATATGGAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCGTCAATTAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGATCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACTTGATACCACTGTTTCTTTGCATGCTGGGTCATGTTCTGGTGCACATGTATGGAGCGCAAAGGATTTATCACGTAAGCTGCCCATTTATATTTCGCCTTTTGTCTTTGATTTCTTATCAGTCGTTGAAGTTCTGAAATAGTGTACAAAGGTGTAACACACTCCTGCTATATGGACTATGATTCAGTTAGTGAGGACAACAAGCATTACCAACTGGATAGTGGTAGAACATGCACTGCCAATGGTCATTCCGGTGGTCAGGGGGTAAGTTTAGTTATTTCTCTTCTACTGGAGCAGGGGAGTTTGTATTTCCTATGAAGTAGCTCTGTTTTAGTACTAGAAGGCCTTCAATTTTTGTTTGGTATGGAGGTGGTGGCAGCTGGTGGGGGTTGCTTTGTGTGTGTGTGTGTGTTTGTAATTTTTTTTCTGGGTCCTTTATCTTGCCAATTTCACCAGTCAACAAACATTTATAGAGGCCTAAAGGTTCCATTGGAGGGGGGTGGCATAACATACTGTTATTGTTATAAATGGAACTCTGACAATCAACTCTTTGTTCCTAGTTAACATCTCATAGTCCAGTTGGAACTATATCTTGTCTTTCTTCCCGAGTATTTTCATAATGCATACTTTCTTTTGTATTGACATTTCTAGTAAATGCATAACCTACTTGATATAGATGTACGTGATGCATCAGAATGAAAGAACTGGGAACGAAGAAAGCTATCCTGAAGGTATGGAATTTTATGAAATCTTATTCTCATTGTAATGTTACTCAACTGATTCATTTCATACTCTGAATATATCTTCATTTAAATTCTGAACTGTATAGTGGTGCCACGTTTTCCATCTATTTGCTATCTCTCTTCAGGTTTTCATACCCTCGCTCGGATTTCTAATATTGTTTCTGGAGATTCTGGCGGAAATGTTCATTCAGGGATGCTGCCTCCTTGGCTTGAAAACCCGGAAGATTGTGGGTTTAAGGTTCAAATAAGAGCAGAGGTTGGGGGTGGTGTTTCTTCTGTGAATGAATCTGCAAAGTCAAAGAAACTGAACCCAAAACGAGTAGGAGCTGCGTGGGCAGAAAAAAGGAAGCTGGAGATGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGTAGGGTATGGCAATCTGGTAGCCGTAAAGAATCTCGAAAAGAATTTGAGAAGGAGAAATCAAAATTCCTGATGGTTGAAAATTCACCTGAAACAAATGTCGATATTCAGCCATACATTAGCAAACGGATGGTGAGCCCCATTTTCATCATATTTAATGCAGTTCTGATGTTTCAATTGTAATAAAAAGGTATTCTAGATATAGATATGAAGGAGGCGGCAGTTCTGAAAGTTGTGATTTTCATCAATATATATATATATTTATATCATTACGACACATTTTTTGTTCTACTCTTAAAATTTCCTTCATATTTATATCTTCTTGTTTATGTTTATAAAATGTTATTTTGCCATGTATTTCCCAACTGGACCTAGTTTTGATGGTGCAACGAGGTAGTGGGAAGTTCCAATACGTGACAATATTTTAAAGGTGATGTTTTGAGCGCTCTATTTTCTAGGTACTTAAACCATCGAGTGGTTACACATTTGAAGTCTGAGTAAAAATTTTAATAAAAAGGTGTCCTAGGATTTTGTCGCAGCCTCTCAGTATTTCTCTTCTTTTCTTGAGACCAAAATGGTGACTAGAGGAAGGAGCAAGAGAATACCTAAAAAGTGAATTTTCCCATATATAATTATGGATCAACACATTTCTAAACGGGAAGGGAAAAAACACGAAGAAAAGAAAAGAAAAAGGAAGTTGAATGATTGGGAAATGGGGAGCACGGGTTCTTAAATACTCCTTGTATCTTGAATATCTCTGGTTTTTTCTGCATGCGACTTTTTAATTGTGCCAGTTTGTGGGGGGTGGGGCAGTTATGATTACTCATGACATTTTCAGCTAATAAGCCACTCTTCAATTAATCTATGATATGTTGTACCTTGCAGAGACTTATTGATACAGCTAATTACTCATGTACAGTAATTACTTTTGTTCATATTTCATAGTTAAGAGTGACTTGGATTGGTAGTCTGATTTATATGTTATGTCACTAATCTTTGTTCTTGCAGCGAAGAGATCGGGAGATCAAGGATGATACTGCCAATCACACGAGTGTATAAGACAACAATTTTCAAAAGCTTTCATCTAGAGAATTACTGTACATGCACAATTCTTGTTGAAGTTTGGTTTTGAGACAGAATTAGGCTTGGAGTTCGATAGGAAACTTCAAAGCAGACTGATATTCCACCTCTTCATTAGTTGACAATAGTTCAAATCTGTTGTAGTAGACACAACTTTAATTTTCTCGAGATATCAGCGGTGCATGAGAACAGGATTTTCTTAACGAACATTGCTTCATCAACATTGTACATTAACTTTTTGTTGGATCGCTCTGGGCATTCATTATTGAATTTAATTGTAAAACAGGGTTTGACCACTGTTAAAGGCATTGCTCTATGTTTTCCATTCCCTATTGCTATAGCACCGGCTCCTTATATCTGCTGCTACTGAAGTTGTAATCTGAAACAAGTTTATATTTAGTAAATATGTAGCTTTGATGATAGCATTTTAGTTTTCTTCAGCAATGCTGGTTGGCCAAGCAGCGGTTGTAAATCTTGATCTTATGTATGCAAGTCAGAATATTATAATTTCCTCGTGTACTATTTTAGAACATTTTTCCCCAAATGCCTGATCGACTCATATTTGGTCAGGGATTGATCTACACTGTATAATTACTATTTTTATGATTAATAGGCTAAACAAGTCAAAGAAAATGTGTGTTCTTATGACAGTTGTTGGGATTTGATTCTTCAAAATATCCGTGTTCTCCTTTTGCAGTGGCCAAGCAGCTGTTCCATATCTCGTGCCTCCATCTTTTTCCAGTTGCTGCCAAGAAAGGTGCCCGGGGACTGATTGTATACGTATTTCTCTGTACCTTCATCCCAGAAGAAAAATGA ATGAAGAAAAAGAAGGAGAAGAAGAGCGCATACGAATACTGCCTCGTCTGCAAGCTAAACCACGATCAAGGGCAGCGTCACAAGTATTTTCCCAACCACAAAAAATCTCTTTCTGCTTTTCTATCTCGGTTCGAGATCAAGCTGTCTGACGTTCGCTTTTTTCTCAACACCCCCTTTCGCCTCTCGCCCGAGTATGCTTCTCAAAATCGGTTCTGGTGCATCTTTTGCGATGTTCAAGTCGATGAGAATGATAGTTCCTTCGCATGTAGCAATGCAATTAAACACCTGGCCAGCGCGGATCATCTGAAGAATTTGAAGCATTTCTTCTGGAAGTATGGTGGTGATGTGGAACGTCTGGATGATTATAGAATTTTGGAAGCTGATGTAGCTAAGTGGGAGAAGAAGTGCAAAGTACAAAGCATAGCTGCTTCTTCCGGTCTTGGACCTACAAATGATATCCAAAATCAAGTCCAATATGGAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCGTCAATTAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGATCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACTTGATACCACTGTTTCTTTGCATGCTGGGTCATGTTCTGGTGCACATGTATGGAGCGCAAAGGATTTATCACTTAGTGAGGACAACAAGCATTACCAACTGGATAGTGGTAGAACATGCACTGCCAATGGTCATTCCGGTGGTCAGGGGATGTACGTGATGCATCAGAATGAAAGAACTGGGAACGAAGAAAGCTATCCTGAAGGTTTTCATACCCTCGCTCGGATTTCTAATATTGTTTCTGGAGATTCTGGCGGAAATGTTCATTCAGGGATGCTGCCTCCTTGGCTTGAAAACCCGGAAGATTGTGGGTTTAAGGTTCAAATAAGAGCAGAGGTTGGGGGTGGTGTTTCTTCTGTGAATGAATCTGCAAAGTCAAAGAAACTGAACCCAAAACGAGTAGGAGCTGCGTGGGCAGAAAAAAGGAAGCTGGAGATGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGTAGGGTATGGCAATCTGGTAGCCGTAAAGAATCTCGAAAAGAATTTGAGAAGGAGAAATCAAAATTCCTGATGGTTGAAAATTCACCTGAAACAAATGTCGATATTCAGCCATACATTAGCAAACGGATGCGAAGAGATCGGGAGATCAAGGATGATACTGCCAATCACACGAGTTTGTTGGGATTTGATTCTTCAAAATATCCGTGTTCTCCTTTTGCAGTGGCCAAGCAGCTGTTCCATATCTCGTGCCTCCATCTTTTTCCAGTTGCTGCCAAGAAAGGTGCCCGGGGACTGATTGTATACGTATTTCTCTGTACCTTCATCCCAGAAGAAAAATGA ATGAAGAAAAAGAAGGAGAAGAAGAGCGCATACGAATACTGCCTCGTCTGCAAGCTAAACCACGATCAAGGGCAGCGTCACAAGTATTTTCCCAACCACAAAAAATCTCTTTCTGCTTTTCTATCTCGGTTCGAGATCAAGCTGTCTGACGTTCGCTTTTTTCTCAACACCCCCTTTCGCCTCTCGCCCGAGTATGCTTCTCAAAATCGGTTCTGGTGCATCTTTTGCGATGTTCAAGTCGATGAGAATGATAGTTCCTTCGCATGTAGCAATGCAATTAAACACCTGGCCAGCGCGGATCATCTGAAGAATTTGAAGCATTTCTTCTGGAAGTATGGTGGTGATGTGGAACGTCTGGATGATTATAGAATTTTGGAAGCTGATGTAGCTAAGTGGGAGAAGAAGTGCAAAGTACAAAGCATAGCTGCTTCTTCCGGTCTTGGACCTACAAATGATATCCAAAATCAAGTCCAATATGGAAATTTTGATAATTTTGGGAATAATAATATCCACTCTGTTGAATCTAGTTCGTCAATTAGTGTTTTGCCTTTACACAGTTATACAAATGAGTATCAGGTATCCAATTCATCCTATTCAGGATCCTCTGATGTTTCAAATTTGGTCTCGTTTCCACTTGATACCACTGTTTCTTTGCATGCTGGGTCATGTTCTGGTGCACATGTATGGAGCGCAAAGGATTTATCACTTAGTGAGGACAACAAGCATTACCAACTGGATAGTGGTAGAACATGCACTGCCAATGGTCATTCCGGTGGTCAGGGGATGTACGTGATGCATCAGAATGAAAGAACTGGGAACGAAGAAAGCTATCCTGAAGGTTTTCATACCCTCGCTCGGATTTCTAATATTGTTTCTGGAGATTCTGGCGGAAATGTTCATTCAGGGATGCTGCCTCCTTGGCTTGAAAACCCGGAAGATTGTGGGTTTAAGGTTCAAATAAGAGCAGAGGTTGGGGGTGGTGTTTCTTCTGTGAATGAATCTGCAAAGTCAAAGAAACTGAACCCAAAACGAGTAGGAGCTGCGTGGGCAGAAAAAAGGAAGCTGGAGATGGAAATGGAGAAGAGAGGAGAAATTGTCCAAAGCTATGGTGACAAGAATTGGCTTCCTAATTTTGGTAGGGTATGGCAATCTGGTAGCCGTAAAGAATCTCGAAAAGAATTTGAGAAGGAGAAATCAAAATTCCTGATGGTTGAAAATTCACCTGAAACAAATGTCGATATTCAGCCATACATTAGCAAACGGATGCGAAGAGATCGGGAGATCAAGGATGATACTGCCAATCACACGAGTTTGTTGGGATTTGATTCTTCAAAATATCCGTGTTCTCCTTTTGCAGTGGCCAAGCAGCTGTTCCATATCTCGTGCCTCCATCTTTTTCCAGTTGCTGCCAAGAAAGGTGCCCGGGGACTGATTGTATACGTATTTCTCTGTACCTTCATCCCAGAAGAAAAATGA MKKKKEKKSAYEYCLVCKLNHDQGQRHKYFPNHKKSLSAFLSRFEIKLSDVRFFLNTPFRLSPEYASQNRFWCIFCDVQVDENDSSFACSNAIKHLASADHLKNLKHFFWKYGGDVERLDDYRILEADVAKWEKKCKVQSIAASSGLGPTNDIQNQVQYGNFDNFGNNNIHSVESSSSISVLPLHSYTNEYQVSNSSYSGSSDVSNLVSFPLDTTVSLHAGSCSGAHVWSAKDLSLSEDNKHYQLDSGRTCTANGHSGGQGMYVMHQNERTGNEESYPEGFHTLARISNIVSGDSGGNVHSGMLPPWLENPEDCGFKVQIRAEVGGGVSSVNESAKSKKLNPKRVGAAWAEKRKLEMEMEKRGEIVQSYGDKNWLPNFGRVWQSGSRKESRKEFEKEKSKFLMVENSPETNVDIQPYISKRMRRDREIKDDTANHTSLLGFDSSKYPCSPFAVAKQLFHISCLHLFPVAAKKGARGLIVYVFLCTFIPEEK Homology
BLAST of Clc03G04040 vs. NCBI nr
Match: KAA0055334.1 (TITAN-like protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 807.0 bits (2083), Expect = 9.1e-230 Identity = 406/476 (85.29%), Postives = 430/476 (90.34%), Query Frame = 0
BLAST of Clc03G04040 vs. NCBI nr
Match: XP_038894287.1 (TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894288.1 TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894289.1 TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894290.1 TITAN-like protein isoform X1 [Benincasa hispida] >XP_038894291.1 TITAN-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 791.2 bits (2042), Expect = 5.2e-225 Identity = 391/436 (89.68%), Postives = 407/436 (93.35%), Query Frame = 0
BLAST of Clc03G04040 vs. NCBI nr
Match: XP_011652149.1 (TITAN-like protein isoform X3 [Cucumis sativus] >KGN64412.1 hypothetical protein Csa_014312 [Cucumis sativus]) HSP 1 Score: 785.8 bits (2028), Expect = 2.2e-223 Identity = 387/438 (88.36%), Postives = 407/438 (92.92%), Query Frame = 0
BLAST of Clc03G04040 vs. NCBI nr
Match: XP_038894293.1 (TITAN-like protein isoform X2 [Benincasa hispida]) HSP 1 Score: 785.0 bits (2026), Expect = 3.7e-223 Identity = 390/436 (89.45%), Postives = 406/436 (93.12%), Query Frame = 0
BLAST of Clc03G04040 vs. NCBI nr
Match: XP_023519525.1 (TITAN-like protein isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 781.6 bits (2017), Expect = 4.1e-222 Identity = 388/436 (88.99%), Postives = 404/436 (92.66%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy Swiss-Prot
Match: F4JRR5 (TITAN-like protein OS=Arabidopsis thaliana OX=3702 GN=TTL PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.1e-87 Identity = 199/435 (45.75%), Postives = 261/435 (60.00%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy Swiss-Prot
Match: Q86UT8 (Centrosomal AT-AC splicing factor OS=Homo sapiens OX=9606 GN=CENATAC PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06 Identity = 36/104 (34.62%), Postives = 47/104 (45.19%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy Swiss-Prot
Match: Q4VA36 (Centrosomal AT-AC splicing factor OS=Mus musculus OX=10090 GN=Cenatac PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 8.5e-05 Identity = 43/144 (29.86%), Postives = 55/144 (38.19%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy TrEMBL
Match: A0A5A7UJL1 (TITAN-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001780 PE=4 SV=1) HSP 1 Score: 807.0 bits (2083), Expect = 4.4e-230 Identity = 406/476 (85.29%), Postives = 430/476 (90.34%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy TrEMBL
Match: A0A0A0LUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050510 PE=4 SV=1) HSP 1 Score: 785.8 bits (2028), Expect = 1.0e-223 Identity = 387/438 (88.36%), Postives = 407/438 (92.92%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy TrEMBL
Match: A0A1S3AZI0 (TITAN-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1) HSP 1 Score: 777.7 bits (2007), Expect = 2.9e-221 Identity = 384/438 (87.67%), Postives = 405/438 (92.47%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy TrEMBL
Match: A0A1S3AZM1 (TITAN-like protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484440 PE=4 SV=1) HSP 1 Score: 771.5 bits (1991), Expect = 2.0e-219 Identity = 383/438 (87.44%), Postives = 404/438 (92.24%), Query Frame = 0
BLAST of Clc03G04040 vs. ExPASy TrEMBL
Match: A0A6J1EBJ7 (TITAN-like protein isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111431668 PE=4 SV=1) HSP 1 Score: 770.8 bits (1989), Expect = 3.5e-219 Identity = 383/436 (87.84%), Postives = 401/436 (91.97%), Query Frame = 0
BLAST of Clc03G04040 vs. TAIR 10
Match: AT4G24900.1 (unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 325.5 bits (833), Expect = 7.5e-89 Identity = 199/435 (45.75%), Postives = 261/435 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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