Clc02G25200 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCCGAGTAGTCCATACATGCAAAGAAAAAGGAATTAAAAATATTTTGAAGAGAATTAAAGGTGAAAATAAATTACGATGAAACAATTAAATGAGAGGAGATAATATTTTTCAGCCTAATTGGCTCCTTCCTTGTGTTGTAGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCGTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGGTTCTCTCTCTCCCAAATTAACTCTTACCACTAATTCCTTCCTTCTACTTTCATTCTACTTTCATTCTTGAATTTTGTTGTACCAATGTGCACCTACTGAAGATTGTTCCCATTTCTTTCTTTTGCTATAGATACGGAGGTCAGATCCAATTGACACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAAAATTAGATTTTTTATTTTCATGTTATGTCTGTTCTTGTTGTTCCATTCCATGAATGATCACGTTTTGTGATATCGAACATTTAATGAAAATAGAAGTCCATTTGTTTCTACGCATTATGCCTTTGTGCTCTAGTCGAGACTGAATAGAATTCCCACTATCCTCTTCAACCAAATTTATCTTCCAAGTTATATAACTTCTTTACTTTGATGGTACAAAAGAATATTGATCCTCATTAGTCATCAATGACACGATCGTGCGTCCCAACTGTTCGACGAAATGCTTAAGTGGGAGGTAAGCTTTGAGACGGCCGCTTTTTTTTTTCTCCAACAGACGCCTACAAGTGTGTGATTTGCCTCTGTCTGTTCGGGCTGATGAAAGACAACCGTGAGAGGCTTTTGGATCATTCAGTGCTGATTCTAATCTCCATAGCCAAATGAGAGAAGATACAGGTACGCCCACGCCATCAGAATTGTTGAACTGTCTCATTAGTTCGACATTTCCTTTTCTGTTTCAGGCACCGTCTCATTAGTCATCAATTCCATTTCATTTACTTTGAAATGGAATTACAGTTTGGCTCAAGCCAACTATCCAAACTGGCCACTAGTTTTTGAATTCAAGGACACAGTTGTGCAACCTATAGAACAACCTATTCAAGTAAGGCCATTTGTTACAAGCTGATCTGAGTTGTTTTGATACAAGTTGAGTTCAATGGCAGACTTCAGCGAAATCTAGTTGATCTAAGTCAAAGGCAAACCAAATCCCGAACTCTTTATATCACTGTTAAGAATCTTACAACGGAAAAATCAAAGAACCTTACACTCTTAATAAGAAAGATGGATTACTCCGTTCATAGTCAATTGGTCTTGAGGTGAAACCCCATGTTATCTAATAATCACCACCCAAGCTAGGCTAGTTCACGAGCTAATGAGCTCAACTAAGCAACTCTTAAGCTATGCTTAGGAGACCTGCTAGAAGAGTGAGTTCAATCACATGAGGAACTTCGAGCTTGGCACCTGAATAGGAGAAATTAGTTCAAAAGGGTTCGGGAAGCACAAGCTCCTTTGGTGTGGGGGTTCATGTAAGCTTACTCTCTCTTATCATTTATCAACAATCAATCCATTAGCAATGACTGTCCATAAACTATCACCCATTAAGTTTACCTATTAAACAAACCCTAAAGAAAGATTTTAATTAGAAAGACGCACAACATCGCGTTTAATTTCGTTCTAGCTACTGCAACCTATGACTAAATTGTGATCATCGTACTTCTCTAATCAACTAGTTAGGTAGAATATTCTTATTATTACATTCAAGAACCTTGTCTTGCACAATTCAACTTTGATTTGACTGAAATAGCAGAAAACATTGGTGTCTTGTCTAATACCTTTCCTGTTGTAAATGCTGTTTAA ATGGAATTAAAGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCGTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGACGCCTACAAGTGTGTGATTTGCCTCTGTCTGTTCGGGCTGATGAAAGACAACCTGCTGATTCTAATCTCCATAGCCAAATGAGAGAAGATACAGGCACCGTCTCATTAGTCATCAATTCCATTTCATTTACTTTGAAATGGAATTACAGTTTGGCTCAAGCCAACTATCCAAACTGGCCACTAGTTTTTGAATTCAAGGACACAGTTGTGCAACCTATAGAACAACCTATTCAAGTAGAATATTCTTATTATTACATTCAAGAACCTTGTCTTGCACAATTCAACTTTGATTTGACTGAAATAGCAGAAAACATTGGTGTCTTGTCTAATACCTTTCCTGTTGTAAATGCTGTTTAA ATGGAATTAAAGTCTGGGAAGGGGAACAAAACTCCAAATTTGAGATCAAAGAAGCTTTCAAAACTTGAAGGAGTGAGAATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCGTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGACGCCTACAAGTGTGTGATTTGCCTCTGTCTGTTCGGGCTGATGAAAGACAACCTGCTGATTCTAATCTCCATAGCCAAATGAGAGAAGATACAGGCACCGTCTCATTAGTCATCAATTCCATTTCATTTACTTTGAAATGGAATTACAGTTTGGCTCAAGCCAACTATCCAAACTGGCCACTAGTTTTTGAATTCAAGGACACAGTTGTGCAACCTATAGAACAACCTATTCAAGTAGAATATTCTTATTATTACATTCAAGAACCTTGTCTTGCACAATTCAACTTTGATTTGACTGAAATAGCAGAAAACATTGGTGTCTTGTCTAATACCTTTCCTGTTGTAAATGCTGTTTAA MELKSGKGNKTPNLRSKKLSKLEGVRMKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFSVPKSKNPSQMGRLQVCDLPLSVRADERQPADSNLHSQMREDTGTVSLVINSISFTLKWNYSLAQANYPNWPLVFEFKDTVVQPIEQPIQVEYSYYYIQEPCLAQFNFDLTEIAENIGVLSNTFPVVNAV Homology
BLAST of Clc02G25200 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 7.9e-29 Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0
BLAST of Clc02G25200 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima]) HSP 1 Score: 128.6 bits (322), Expect = 6.3e-26 Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of Clc02G25200 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122.5 bits (306), Expect = 4.5e-24 Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Clc02G25200 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.1 bits (305), Expect = 5.9e-24 Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of Clc02G25200 vs. NCBI nr
Match: XP_010257524.1 (PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera] >DAD42157.1 TPA_asm: hypothetical protein HUJ06_000387 [Nelumbo nucifera]) HSP 1 Score: 76.3 bits (186), Expect = 3.7e-10 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Clc02G25200 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 3.8e-29 Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0
BLAST of Clc02G25200 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 3.0e-26 Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of Clc02G25200 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-10 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Clc02G25200 vs. ExPASy TrEMBL
Match: A0A1D1XLA5 (Mitochondrial distribution and morphology protein 34 (Fragment) OS=Anthurium amnicola OX=1678845 GN=mdm34_2 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-10 Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Clc02G25200 vs. ExPASy TrEMBL
Match: W9QLE6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.0e-10 Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Clc02G25200 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09 Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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