Clc02G20440 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCGACGGCAAAAAGTTCTGAATGAGACGGAAAAAATCAAACGCAATAGTTTCAATTTAATACGTTTCTGTCAAACTATACAAAGCCCTAATTCCTGGAACCCTAATGACTTGTCAAAGCTACTACCAACACAATAATCTACTGATTTCTTCCTCTTCTTCTTCTTCCCTCGACCTGTTAAGCATTCCCAGAAAGTCAATATCATCGTTTCGTTTACCCTCTTGGTCGTTTGGATGAAGATGCGGTTCAACTGATTTCCTCCCATTTTGTTGGAAATTGGATTGGTTTATGACCGCAATCCCAACTCATTGTTTTCTTGTTCGGAAGTTGAAATTCCCTTATTTTTGTTATTGTTTAGTTGAATTCCATATTAGCAAGTTCGTTCTATTCAGATTTTTTCTTCGAATTTTGAACTTGGGTTTCGCATTTCAATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCACTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCCATGGGTCTTGGAGCTGGACCTGCACATGCCGTATATTTTACTGTCTACGAGAATTGTAAGAAGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAATGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGTACCCCATTCAATTATTTGGTCTTAGGCTCTGCTAATTTTGTCCTGGTTCCCCTTTGCATATTTGCGAGAAGATTATAAAAATAAGAGAGATAGTGTTTCTAGAGCTAGAATAAGGTTATGCTTGGGGGTGCTTTTGTCACACTATAAGGACTTCCCCCCTAAAAACTATTTTAAATTTCGAATGCACTTGTTGAGCCAAGGTTCTTTTTTGCTCGAGTAATTGGCCGAAAAGCGAAAAGTACTAGTACCTGGTATCAAAATGTTATGTCATTCAACATTCTTTTATAATTAGAGGCCTCCAAGTGGCAGTCTCATTGACTAAGCTTATAGTCTCTTGAGTAACAAGTACCCAGAGGTTGCATGTTTGAATTTGAGTGAGCTGAATAAGTAAAACCTTTGATGTTTCCAATGGATGGACCTTAGGCTAGGTGCAGGCGAAAAAGAAAAGTGCTTGAAATTAGAATACTTTGCTTTTATTTTCAAAGCTGTGAGTGGAAATTACATGTTACACTGTATATTTGTGAGCATTTAGGCATATGCTTGTGTGTACTTTGACTATTCTCATAGGGTGACCTTATTATATTTGGTGGCCAAGGTAACTCGTAGGATATCAGATCTTGTGTAGACCAACCTGTGATGATTTTGTTAAACAACTTATCAAGGGAACACATCCTCACCCTACTAACTACCCAAGAAGGCCTCATCACAACTATCTTTTCGTGACCCCAACCTACAAACCCTGAAAGGGAAGGGGAAAAATGATAAAACAACTCTATATGAAGAAAAGTTATAAAATTTGAAGTTATACTTTGGTTGGGAGAATGATGGAAGTTAGTCCATAGTGAAATTGAGGGTTAACTATTGATGAAAGAGACAAGAGAGGGAAAAATATGCTGTTCTCTCAAACTTATTGCAACGGTCTTACCCCTACCTGGGACCCCAAAAGGGATGGGAAAAATGCATGAAAAAAATTATTAAAAAGAAGTATAGAAGTTAAAGTTATATCTGCAAATATGGTTTGAAAGAATGGCGTTGAAGGTCCAGAATGAAACTGAGGTTCAATAATTGATGACAGAGAACGGTGAGAAAAATATGCCAAACCCTTCTTTGTTTCTTTTTCCATAGTTTTCCTTTCATCAAACAATGGTTATATGAATATCAAATAATTCTAGACTAGGAGGGGGGTCAGGGATGGATTGGGGAATTCATTTTCCAACCCCAACTCCAACTCATCTTATCTGTCTGTATGAACCTGTGAAGGTTTTGTGAACTGAAATTGATTGTGTACTAAATTTCTGTTTACAATCGTTATCTTCAAAACCACAAAATAGTCATGCTGAAAATTTGTTTATAAGTTTTCTACCCTGAAAGAAGGACCTTTTATGTGTTTTGTGAGTTAAACAACATTCACTAACACCTTATTCAGATATCAAACATCTTAAGAGTATGTTAATTTTGGATGTGTTTGTTTAGTTTATCTTTTGCCTTTATTGAACTCTGTCATTGTGGAGATGATGATTAAAATGTGTTTGGATCCTTAAATCGTGTCTCATCCTTTGGATTCAATGGACCTTGCTTAGTTAGCTCTCTTTTTTAGGAATTTTCCATTTCTCCTTTCTTATTGAACAAGTGGAGTATTGGAATCTTTTGATGGTCTCCTTGGTCTTCTCTGGTGGATAGGAACAAACCCTACATATGTGACATTTTTTATAATTGTCACGTGCTGCTTACACCCAAACACAAAAAACTGTTGAATTCCTTCTTTACCTTCAAATGTTAAGGAAGAACCTGTTTAGTTCGAAAAACTCGAAAAGTACAAATATAGTGAACTCTGCTACAGGTTATATGTGAATTGAAAGGTGAATAGATGATATGGATCTTTTCTTTTTGGGGTACTAAAAGAAAATAAGAAATGTTGAATTCCTTCTTTGCCTTCAAATGTTAAGGAAGTACCTGTTTAATTTGTTAGTAACAAAAAACTCGTAAAAGTACCAATATAGTAAACTCTGCTACAGGTTACATGTAATGTGACTGAACGACGAATAGACATTGTAGATTTTTTCTTTTTTGGTTACCAAAAAAAAGGCAGAAATGCATAATTTTTCATTCAACCATAAAAAAGTTAAGATGCGATGATACATAAATGTTCAAAGATACATGACCAACTGAAGTATTAAATATCTCAAGAAATGGAATGTATTGAGGATTGTGTGATGCTTAGGGAGCAGAAACAGGCCCAGTTTACATGCTAAATTATGTGCTGCTTCCCTAGATCCGTAGTTGAATGTTTAAGTGACAACCTAACCTTATTTTTCACATTTATGGATGCACAGGGTGTATGTGGATGCGATAGATTCAAAAGCGGGTCAATCAGGGACGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGAAAATAGGATGCAGAGAGGAGGAGAAGAGGGGATATTCTTTCTTTTTTACTTTGTCCCTTTTTTTCCTGCAGTTGTAACAGAGACGCTTTCTTTTTGGAGCTGCAGAGAATTTTGCAGGAGGGACTGTCTCAAAAAAGGCGAATGCTACCACTTCAAGTCAAAGGAGTACACAAAGCAAAGTTAGATTATAATTTGTATTCTACACGTTGTTGATGGTTTCTAATAATGCCATATATAAAATTTTTCATCTGTTTTCTCTTTTCTTTGATGGTTCTGTTGGCATTAGAACTGTTTTGTTTTAGAGTCAGCCTACTGCAATGCATTCATTTATATTAGAATATTAGATTCTGGGTAGTTAATGAAAATGACTTTCTCAAATGTTTGTCTCTAGAACTTGAATGATCAAGGAGGCCACACAAAAAAAACACAGCCTTAAGGGTTGGGGACTTGGGGTGGAGAAAACCCCAAACCCAAAAAGAAAGGCTATTACAAAAAAACACAGCTTAAACTCCTTGTGAAAATAACTTCACAAGAAGCTCAAAGCTGAACACTGGAATTACAACTATCTTATAATATTGTACTTTAATTT GCCGACGGCAAAAAGTTCTGAATGAGACGGAAAAAATCAAACGCAATAGTTTCAATTTAATACGTTTCTGTCAAACTATACAAAGCCCTAATTCCTGGAACCCTAATGACTTGTCAAAGCTACTACCAACACAATAATCTACTGATTTCTTCCTCTTCTTCTTCTTCCCTCGACCTGTTAAGCATTCCCAGAAAGTCAATATCATCGTTTCGTTTACCCTCTTGGTCGTTTGGATGAAGATGCGGTTCAACTGATTTCCTCCCATTTTGTTGGAAATTGGATTGGTTTATGACCGCAATCCCAACTCATTGTTTTCTTGTTCGGAAGTTGAAATTCCCTTATTTTTGTTATTGTTTAGTTGAATTCCATATTAGCAAGTTCGTTCTATTCAGATTTTTTCTTCGAATTTTGAACTTGGGTTTCGCATTTCAATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCACTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCCATGGGTCTTGGAGCTGGACCTGCACATGCCGTATATTTTACTGTCTACGAGAATTGTAAGAAGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAATGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGCGGGTCAATCAGGGACGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGAAAATAGGATGCAGAGAGGAGGAGAAGAGGGGATATTCTTTCTTTTTTACTTTGTCCCTTTTTTTCCTGCAGTTGTAACAGAGACGCTTTCTTTTTGGAGCTGCAGAGAATTTTGCAGGAGGGACTGTCTCAAAAAAGGCGAATGCTACCACTTCAAGTCAAAGGAGTACACAAAGCAAAGTTAGATTATAATTTGTATTCTACACGTTGTTGATGGTTTCTAATAATGCCATATATAAAATTTTTCATCTGTTTTCTCTTTTCTTTGATGGTTCTGTTGGCATTAGAACTGTTTTGTTTTAGAGTCAGCCTACTGCAATGCATTCATTTATATTAGAATATTAGATTCTGGGTAGTTAATGAAAATGACTTTCTCAAATGTTTGTCTCTAGAACTTGAATGATCAAGGAGGCCACACAAAAAAAACACAGCCTTAAGGGTTGGGGACTTGGGGTGGAGAAAACCCCAAACCCAAAAAGAAAGGCTATTACAAAAAAACACAGCTTAAACTCCTTGTGAAAATAACTTCACAAGAAGCTCAAAGCTGAACACTGGAATTACAACTATCTTATAATATTGTACTTTAATTT ATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCACTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCCATGGGTCTTGGAGCTGGACCTGCACATGCCGTATATTTTACTGTCTACGAGAATTGTAAGAAGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAATGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGCGGGTCAATCAGGGACGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGA MATEATEATTKFQSPDFRPVPSPPDFHPEIMVSAHDGLRFWQFMIAGSIAGSVEHMGMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSIAHAASGVCATVASDAVFTPMDMVKQRLQLSNNSYKGVLDCIKRVLREEGVKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAAAGASAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHELNGSGSDNLT Homology
BLAST of Clc02G20440 vs. NCBI nr
Match: XP_008463838.1 (PREDICTED: mitoferrin-like [Cucumis melo]) HSP 1 Score: 651.0 bits (1678), Expect = 5.6e-183 Identity = 316/331 (95.47%), Postives = 322/331 (97.28%), Query Frame = 0
BLAST of Clc02G20440 vs. NCBI nr
Match: XP_004143170.1 (mitoferrin [Cucumis sativus] >KGN47047.1 hypothetical protein Csa_020661 [Cucumis sativus]) HSP 1 Score: 647.9 bits (1670), Expect = 4.7e-182 Identity = 314/331 (94.86%), Postives = 321/331 (96.98%), Query Frame = 0
BLAST of Clc02G20440 vs. NCBI nr
Match: XP_038902774.1 (mitoferrin [Benincasa hispida]) HSP 1 Score: 640.6 bits (1651), Expect = 7.6e-180 Identity = 314/329 (95.44%), Postives = 320/329 (97.26%), Query Frame = 0
BLAST of Clc02G20440 vs. NCBI nr
Match: XP_022148452.1 (mitoferrin [Momordica charantia]) HSP 1 Score: 630.6 bits (1625), Expect = 7.8e-177 Identity = 302/328 (92.07%), Postives = 317/328 (96.65%), Query Frame = 0
BLAST of Clc02G20440 vs. NCBI nr
Match: KAG6605395.1 (Mitoferrin, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 630.2 bits (1624), Expect = 1.0e-176 Identity = 305/331 (92.15%), Postives = 315/331 (95.17%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy Swiss-Prot
Match: Q55DY8 (Mitoferrin OS=Dictyostelium discoideum OX=44689 GN=mcfF PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 8.4e-57 Identity = 121/299 (40.47%), Postives = 179/299 (59.87%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy Swiss-Prot
Match: Q620A6 (Mitoferrin OS=Caenorhabditis briggsae OX=6238 GN=mfn-1 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.2e-52 Identity = 120/285 (42.11%), Postives = 160/285 (56.14%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy Swiss-Prot
Match: Q23125 (Mitoferrin OS=Caenorhabditis elegans OX=6239 GN=mfn-1 PE=2 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.2e-52 Identity = 120/286 (41.96%), Postives = 163/286 (56.99%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy Swiss-Prot
Match: Q9VAY3 (Mitoferrin OS=Drosophila melanogaster OX=7227 GN=mfrn PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.1e-51 Identity = 116/281 (41.28%), Postives = 166/281 (59.07%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy Swiss-Prot
Match: Q287T7 (Mitoferrin-1 OS=Danio rerio OX=7955 GN=slc25a37 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.7e-49 Identity = 120/286 (41.96%), Postives = 162/286 (56.64%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy TrEMBL
Match: A0A1S3CK52 (mitoferrin-like OS=Cucumis melo OX=3656 GN=LOC103501881 PE=3 SV=1) HSP 1 Score: 651.0 bits (1678), Expect = 2.7e-183 Identity = 316/331 (95.47%), Postives = 322/331 (97.28%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy TrEMBL
Match: A0A0A0KF81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G181520 PE=3 SV=1) HSP 1 Score: 647.9 bits (1670), Expect = 2.3e-182 Identity = 314/331 (94.86%), Postives = 321/331 (96.98%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy TrEMBL
Match: A0A6J1D537 (mitoferrin OS=Momordica charantia OX=3673 GN=LOC111017091 PE=3 SV=1) HSP 1 Score: 630.6 bits (1625), Expect = 3.8e-177 Identity = 302/328 (92.07%), Postives = 317/328 (96.65%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy TrEMBL
Match: A0A6J1L227 (mitoferrin-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499705 PE=3 SV=1) HSP 1 Score: 626.3 bits (1614), Expect = 7.2e-176 Identity = 306/331 (92.45%), Postives = 316/331 (95.47%), Query Frame = 0
BLAST of Clc02G20440 vs. ExPASy TrEMBL
Match: A0A6J1G850 (mitoferrin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451733 PE=3 SV=1) HSP 1 Score: 626.3 bits (1614), Expect = 7.2e-176 Identity = 303/331 (91.54%), Postives = 314/331 (94.86%), Query Frame = 0
BLAST of Clc02G20440 vs. TAIR 10
Match: AT2G30160.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 508.8 bits (1309), Expect = 3.2e-144 Identity = 247/328 (75.30%), Postives = 276/328 (84.15%), Query Frame = 0
BLAST of Clc02G20440 vs. TAIR 10
Match: AT1G07030.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 506.1 bits (1302), Expect = 2.1e-143 Identity = 246/324 (75.93%), Postives = 275/324 (84.88%), Query Frame = 0
BLAST of Clc02G20440 vs. TAIR 10
Match: AT1G74240.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 146.4 bits (368), Expect = 4.2e-35 Identity = 104/360 (28.89%), Postives = 166/360 (46.11%), Query Frame = 0
BLAST of Clc02G20440 vs. TAIR 10
Match: AT4G11440.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 140.2 bits (352), Expect = 3.0e-33 Identity = 89/277 (32.13%), Postives = 152/277 (54.87%), Query Frame = 0
BLAST of Clc02G20440 vs. TAIR 10
Match: AT1G07025.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-32 Identity = 76/152 (50.00%), Postives = 96/152 (63.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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