Clc02G18860 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATATTAAAAATAACTAATATCATTCAAAAAATGGGAAGGCCAATTCTTGTTGCCACCGGCGCTGGCTTCAGAGACGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCTATCTCTCTCATATCAATGGTCATATTTGCCTGCGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGTGGTGGTGGTTGTGGGGGGTGTGGAGGAGGCTGATGTCAATGTGTTTTCCGAATTTG TATATATTAAAAATAACTAATATCATTCAAAAAATGGGAAGGCCAATTCTTGTTGCCACCGGCGCTGGCTTCAGAGACGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCTATCTCTCTCATATCAATGGTCATATTTGCCTGCGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGTGGTGGTGGTTGTGGGGGGTGTGGAGGAGGCTGATGTCAATGTGTTTTCCGAATTTG ATGGGAAGGCCAATTCTTGTTGCCACCGGCGCTGGCTTCAGAGACGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCTATCTCTCTCATATCAATGGTCATATTTGCCTGCGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGTGGTGGTGGTTGTGGGGGGTGTGGAGGAGGCTGA MGRPILVATGAGFRDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGGG Homology
BLAST of Clc02G18860 vs. NCBI nr
Match: KAG6604774.1 (hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.5 bits (210), Expect = 2.2e-13 Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Clc02G18860 vs. NCBI nr
Match: KAG6603229.1 (hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11 Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Clc02G18860 vs. NCBI nr
Match: KAG6603228.1 (hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.3 bits (181), Expect = 5.1e-10 Identity = 53/81 (65.43%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Clc02G18860 vs. NCBI nr
Match: CAB4273122.1 (unnamed protein product [Prunus armeniaca] >CAB4303638.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 65.1 bits (157), Expect = 3.1e-07 Identity = 50/86 (58.14%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Clc02G18860 vs. NCBI nr
Match: GAY54286.1 (hypothetical protein CUMW_155540 [Citrus unshiu]) HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Clc02G18860 vs. ExPASy TrEMBL
Match: A0A6J5WYX6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20264 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07 Identity = 50/86 (58.14%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Clc02G18860 vs. ExPASy TrEMBL
Match: A0A2H5PPJ4 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_155540 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.7e-07 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Clc02G18860 vs. ExPASy TrEMBL
Match: A0A0A0LJD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062640 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.4e-05 Identity = 45/78 (57.69%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Clc02G18860 vs. ExPASy TrEMBL
Match: V4UCP2 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017260mg PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.1e-05 Identity = 47/95 (49.47%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of Clc02G18860 vs. ExPASy TrEMBL
Match: A0A251PYS0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G117200 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.1e-05 Identity = 45/88 (51.14%), Postives = 53/88 (60.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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