Clc02G16500 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G16500
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	PsbP domain-containing protein 7
Location	ClcChr02: 28962248 .. 28966524 (-)
RNA-Seq Expression	Clc02G16500
Synteny	Clc02G16500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAGCTCTCCAATTTTCCCTCTCAAACAGCCGAAGTGCAAAATCTAAACTCATAGGAAATGGCGTTGAGTCGCTGCTTTTCCGGCAGCCGAATGATGAATTTCCGGCGGGGCATAATATCGGCGCAGTCGTCGTCCGACGAACCTGCCGGAAAATCTGCGGCGGAGGAATTCGCCCCGATGGAAGTGACGTTTCGGCGGAGGCTAATTGTTGGGATCGGGTCGGCTTCTCTGGTGGCCGTTGGGGCAAATTTCGCCGGCGTGACGAGCTTTCTACTGGGTTTGTCGCCGGAAAATAATCGGCGTTTGAGAGTTGATGTTATTTATCCAATTGGAGGGTACAGTCGGTGCTTGGATGCCAATGAAGGATTTGGTCAGTAACTTCTTCTCTTCTCCAACATACAATTTTTTTTCTTCGGATAATTCGATTTATTTATTTTTTATTTTATTCTTGAAATTTCTCTCTTGCGAGGGGTGAGGTCATAAATATAAATAAACATAGACTAATCTTAATTAATGAACCGTTAATTTTTATTGTAATTGATTAAATAATAATATTATTTTTTATGCAAGAAGTACATGAATTCCAAAATCTACAGAATTCAACAATAAATCTGAAGTACTGGAGTAAATTTAAGATTTATAAAAATTCCCTAAATTTTCATAAAAGTAACCATTTCAATTTACTCCTTGAACTTTGATTCGTAACTATTTTAGTCTAATGTAGTTTCAATTTTGTAACAATTTAGCTTTTATACTTTTAAAGTTGGTAACGATGTAGTCCTTATTTTAGAAATTAGTTTTAGAATTTAATAATATTTCTTGCATAAATAAACCGATAAACTAATTAGAGACTCAATATTTTTACAAAATACGTAGTTTGCATCATAAAATAATAAAAATTAGTATTTTGATGATTTTTTTTCATGTTAGGGACTAGATTGTTACAAATTTGAAAGTACAAGGACTAAGTTATTACATACTAAAGTTCACGGACTAAATTGTTATAAAATTGAAAGTACAGGGGTTAAATCATTCCAAACTAAAATTTAGGGACCAAAGTGTTTTTTAACCTTAAAAGTACGTGAAAATTAGACATTTAAAAGTATAAAAATACTAAAATTGATTAGATTGCATAATGCATAGACCAAAATGGTATTTTAACCTTAAATTAATGAATTGTGAGTGTGTCGCCATATAATGCTTATAAGTTGATCATATTTGTTGACCTAAGTATCCTAAGATCGACACATAAATTTAAGGTTAAATTGCAAAAACTTTTAAGCTTATCTATTAGTTTCCTCTACTTATAAAGTGTCCAATTTCAATTTTAGATTTAATAAATCTCTAAACCTTTAATTTTGTGTCTAATAAATCTTTTGAAAATTAGTTTATCCCTTAAGTATAAATTTGAATTTTATGTTTGATAAAATCTTGAACTTTCAATTTTTAGTCTAGTATGTCGTAAAACCAAATTTATAATCTTAAAAGTCCAAAAACAACATAGATACAAACTTTAAAGTCTAAAGATTAAATTTGTAATTTAACCAAACAAGAAATTGTCTTCTATTAGTTTCAATTGATCTATATAAATAGTCTTTTTTAATTAAATTGCAGATTTAGCCCCTATAATTTGGAGAAATTTTATATTTGGTCCTTATAGTTTTAAATTAAATATAGTCTCTGATTTAATAAAACTCATAAATAATCTATACAATAACTATTTATCAAACTATAGAGACTACTTATAGAGTTCTATCAAACCACAAGAATTAAAATAAATTAAATTCTTTAAAAATCACAACACTGAATTCTAACTCTCTAAATTTTTTTTAATGCAGCTATAATTAATGTGTGTAAACAACAATCATTTCTTATATTGCGTTTAATACATTACCGTTTTCTATAATGGTGTATCATCACAGACAAAGGCAATAAAATTTTGAAACATCTAAATGAATTTTGCTATTAAAAAAACACTATATTTATGCTCGTTTGGTAACCATTTTGTTTTTTGTTTTTAAAAATTAGACCTATTTTCTGCTCACTTCTTACATTGATTTGCATCTCTCTTAATTACAATAGTTGAATTATTTGCCAAATTTCAAAAACAAAAACAAGTTTTCAATAGCTAATTTTTTTTTTTTTTCAAATTTTAGCTTGTTTTTTAGACCATTAATAAAAAATAGGCAACAAACGAATAAATTTAAAAGTGAAAGTAGTGTCTATAGGCTTAATATTAAAAAATAAAAACAAAAAATGAAATGTTTACAAAAACAAGACCTTAATCAATAAATCTATTTTTCGGTAAATCAATTAATAAAGATTCATAGGGCAGTAAATGAAACATATATAATGGACTCGGAAGAAAAATCTACATTTGTTCCCAAATTTTGAGCTTTTCGGGTAATGATAATTGATAAGGAGCGTTTAGTTCCCCCACGGCAATTATACATAAAACACAGCAAAAGTCACATATAACTTCTCAACCAATCAAAGGTTCAAATTCCTACTTCCACATTGAAAGATAAAAAGACGAGTCGGATGGCATTTTTTATATTGTGCTATATTATTATATTATTTACTCCTAACGATTTGCATCTTTCGATTTGTTTCATTATCACTGAGCACTGCCTAAAAATTAATGTTTAAAGAACATCCAGAGTTCATATACCCTGCGAGTTGGGTAGGAGACCAGAGGCTGCTATATCGGGCAGCTGAAAAGTCGGAATATGAACGATCACTGGACCCTCCACCCTTGACCGGTTCCACCATGGGTCGCCGTCATCAGAATGTTAATGAGCCAGTGGTTGCATTCGGTCCTCCAGGTTCGAGTGGAGAGCTCAATGTTAGCGTCATCGTGTCTCCGGTACCTCTTGATTTTTCGTAAGTCACCTAACTTATCTATGATTACTTGAGTCCTACCGTGCAAATGGGAATTCAAAATCCTTCAATCCTTCCACATTTTAACGTATATGGCGGAGGGATTGATCATAAAGTCCTAGATTTGTGATATTTCAAAAGTCCTTTGGGAGATGTTTAACTCTATTTAATGAACCCGGGTTGGTTTCTAAATTTAGATCATAAAGGAGTTAGGTTAGGTTATAAAAACAAAGGTCCACATAGCTTATGTTCAATTTGTGAGTTCATGATTTATAAAATTATGAGAAAAACTTAGGTGTGGCAAGATTACAATTTCTTTGTGCAGCCTAGGCAATTGTCCAAACTTACATGTGGTAATTCTTTTTAATAATTTTTAACTTTTTTTTGTGTGTTTGTGTACATGAAAGGGAAAGCATGAATTAGGTGCATGCCACCTTATACCAACTAGCAACAGTACTAGCTAGTTGCATTTCATTTTCGTCGATAGGAACATGCAGTTCAATATTACCAAAAATGAGGAACCACACAAAAATGCCATTTCTTTCTTGGTTGGACCCAGTGATTTCAAAAAAAGAAAAAAGTATCCGCTGGCAGTCTAAGCTGCACCTAATCATTACTCTAAAATTATTGGATTCAGAATTTCTATACACAGTCAAAAGGAGATAGTTTAAAATGGAATGAAGCCACAATAATGGTGGTTGTTAATCAAGGTGAGCAATAGTTTGAAATTTTGCTAGTAGGCCTTGCCTAGTTCAAATGAAATTTGATTCTAAGTAAGATTTCTCCAATAGGAACTACCTAGGAGGATTTATCAAACCATAGACACTATTTATGACATTTTATGAAACTGTAAGAACTAACTTCTAACTTTTAAAAGCATAGGGACTAAACTCTGACTTTCTCCAAACCATTAGGAACAAATTTGCAATTTAACTTCTCTTTTCCATTCTTTGGATTACTACAAAGAATTGAAGCATTTGGAGGCCCAGATGAAGTAGGAGAAGCTGTGATCAGGACTATTACAAGGGCCAGCAAACGCTCTGATCTTAAAGGAACCTTGATACAAACAACTCTGAGAGAGGATTTGCTAAACAAATACTATGAACTGGAATTCAAAGTGGAAAGCTCCTCGTTTCGGCGGCACAACATTGCTGTTTGTTGTGCTCATCGGGGCAAATTATATACACTGAATGCCCAGGCACCTGAATCAGAATGGCCAGGTCTAAAATCAGAGATGAAGACAATTGCCAATTCTTTTTGTCTCTCAGCTTGAAGCTTCTTATGTTGTATTACGGTGGGGTTAGGGTTTGGGAATTTTTTGGAGAGGGTACTATAAAATTTAGAAGAATGTAAAACTCATTATCTTCCTATTTATAAAACTATATTGGAGATGTT

mRNA sequence

CGTAGCTCTCCAATTTTCCCTCTCAAACAGCCGAAGTGCAAAATCTAAACTCATAGGAAATGGCGTTGAGTCGCTGCTTTTCCGGCAGCCGAATGATGAATTTCCGGCGGGGCATAATATCGGCGCAGTCGTCGTCCGACGAACCTGCCGGAAAATCTGCGGCGGAGGAATTCGCCCCGATGGAAGTGACGTTTCGGCGGAGGCTAATTGTTGGGATCGGGTCGGCTTCTCTGGTGGCCGTTGGGGCAAATTTCGCCGGCGTGACGAGCTTTCTACTGGGTTTGTCGCCGGAAAATAATCGGCGTTTGAGAGTTGATGTTATTTATCCAATTGGAGGGTACAGTCGGTGCTTGGATGCCAATGAAGGATTTGAGTTCATATACCCTGCGAGTTGGGTAGGAGACCAGAGGCTGCTATATCGGGCAGCTGAAAAGTCGGAATATGAACGATCACTGGACCCTCCACCCTTGACCGGTTCCACCATGGGTCGCCGTCATCAGAATGTTAATGAGCCAGTGGTTGCATTCGGTCCTCCAGGTTCGAGTGGAGAGCTCAATGTTAGCGTCATCGTGTCTCCGGTACCTCTTGATTTTTCAATTGAAGCATTTGGAGGCCCAGATGAAGTAGGAGAAGCTGTGATCAGGACTATTACAAGGGCCAGCAAACGCTCTGATCTTAAAGGAACCTTGATACAAACAACTCTGAGAGAGGATTTGCTAAACAAATACTATGAACTGGAATTCAAAGTGGAAAGCTCCTCGTTTCGGCGGCACAACATTGCTGTTTGTTGTGCTCATCGGGGCAAATTATATACACTGAATGCCCAGGCACCTGAATCAGAATGGCCAGGTCTAAAATCAGAGATGAAGACAATTGCCAATTCTTTTTGTCTCTCAGCTTGAAGCTTCTTATGTTGTATTACGGTGGGGTTAGGGTTTGGGAATTTTTTGGAGAGGGTACTATAAAATTTAGAAGAATGTAAAACTCATTATCTTCCTATTTATAAAACTATATTGGAGATGTT

Coding sequence (CDS)

ATGGCGTTGAGTCGCTGCTTTTCCGGCAGCCGAATGATGAATTTCCGGCGGGGCATAATATCGGCGCAGTCGTCGTCCGACGAACCTGCCGGAAAATCTGCGGCGGAGGAATTCGCCCCGATGGAAGTGACGTTTCGGCGGAGGCTAATTGTTGGGATCGGGTCGGCTTCTCTGGTGGCCGTTGGGGCAAATTTCGCCGGCGTGACGAGCTTTCTACTGGGTTTGTCGCCGGAAAATAATCGGCGTTTGAGAGTTGATGTTATTTATCCAATTGGAGGGTACAGTCGGTGCTTGGATGCCAATGAAGGATTTGAGTTCATATACCCTGCGAGTTGGGTAGGAGACCAGAGGCTGCTATATCGGGCAGCTGAAAAGTCGGAATATGAACGATCACTGGACCCTCCACCCTTGACCGGTTCCACCATGGGTCGCCGTCATCAGAATGTTAATGAGCCAGTGGTTGCATTCGGTCCTCCAGGTTCGAGTGGAGAGCTCAATGTTAGCGTCATCGTGTCTCCGGTACCTCTTGATTTTTCAATTGAAGCATTTGGAGGCCCAGATGAAGTAGGAGAAGCTGTGATCAGGACTATTACAAGGGCCAGCAAACGCTCTGATCTTAAAGGAACCTTGATACAAACAACTCTGAGAGAGGATTTGCTAAACAAATACTATGAACTGGAATTCAAAGTGGAAAGCTCCTCGTTTCGGCGGCACAACATTGCTGTTTGTTGTGCTCATCGGGGCAAATTATATACACTGAATGCCCAGGCACCTGAATCAGAATGGCCAGGTCTAAAATCAGAGATGAAGACAATTGCCAATTCTTTTTGTCTCTCAGCTTGA

Protein sequence

MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVAVGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA

Homology

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BLAST of Clc02G16500 vs. NCBI nr
Match: XP_038889473.1 (psbP domain-containing protein 7, chloroplastic [Benincasa hispida])

HSP 1 Score: 515.0 bits (1325), Expect = 4.1e-142
Identity = 262/281 (93.24%), Postives = 268/281 (95.37%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MALSRCFSGSRMMNF R  ISAQ  SD+PAGKSAAEEF P+ VTFRRRLIVGIGSASLVA
Sbjct: 1   MALSRCFSGSRMMNFPRSTISAQWPSDDPAGKSAAEEFTPLAVTFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           VGANFAGVTSFLLGLSPEN+RRLR+DV+YPIGGYSRCLDANEGFEFIYPASWVGDQRLLY
Sbjct: 61  VGANFAGVTSFLLGLSPENSRRLRLDVVYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMG-RRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFS 180
           RAAEKSEYERSLDPPPLTGSTM  RR QNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFS
Sbjct: 121 RAAEKSEYERSLDPPPLTGSTMDRRRRQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFS 180

Query: 181 IEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHN 240
           IEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVESSSFRRHN
Sbjct: 181 IEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLGKYYELEFKVESSSFRRHN 240

Query: 241 IAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           IAVCCA RGKLYTLNAQAPESEW GLKSEMKTIANSFCLSA
Sbjct: 241 IAVCCARRGKLYTLNAQAPESEWLGLKSEMKTIANSFCLSA 281

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BLAST of Clc02G16500 vs. NCBI nr
Match: XP_004144823.1 (psbP domain-containing protein 7, chloroplastic [Cucumis sativus] >XP_031736676.1 psbP domain-containing protein 7, chloroplastic [Cucumis sativus] >KGN60943.1 hypothetical protein Csa_021222 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-139
Identity = 252/280 (90.00%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA S CFSGS+M+N RR IISAQSSSD+PAGKSAAEEFAP+ VTFRRRLIVGIGSASLVA
Sbjct: 1   MAFSCCFSGSQMINLRRNIISAQSSSDDPAGKSAAEEFAPLAVTFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           +GANF GVTSFLLGLSPEN+RRLRVDV+YPIGGYSRC+D NEGFEFIYP+SWVGDQRLLY
Sbjct: 61  IGANFGGVTSFLLGLSPENSRRLRVDVVYPIGGYSRCIDPNEGFEFIYPSSWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           RAAEK EYERSLDPPPLT STM RR +NVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI
Sbjct: 121 RAAEKLEYERSLDPPPLTDSTMDRRRRNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNI 240
           EAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++FRRHNI
Sbjct: 181 EAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFRRHNI 240

Query: 241 AVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           AVCCA RGKLYTLNAQAPESEW GLKS+MKTIANSFCLSA
Sbjct: 241 AVCCARRGKLYTLNAQAPESEWAGLKSKMKTIANSFCLSA 280

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BLAST of Clc02G16500 vs. NCBI nr
Match: XP_008454379.1 (PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X2 [Cucumis melo] >KAA0048018.1 psbP domain-containing protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 498.8 bits (1283), Expect = 3.0e-137
Identity = 248/280 (88.57%), Postives = 264/280 (94.29%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA SRC SGS+M+NFRR II AQSSSD+PAGKSAAEEFAP+  TFRRRLIVGIGSASLVA
Sbjct: 1   MAFSRCLSGSQMINFRRSIILAQSSSDDPAGKSAAEEFAPLAATFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           VGANFAGVTSFLLGLSPEN+RRLRVDV+YPIGGY+RC D NEGFEFIYP+SWVGDQRLLY
Sbjct: 61  VGANFAGVTSFLLGLSPENSRRLRVDVVYPIGGYNRCFDPNEGFEFIYPSSWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           R AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGELNVSVIVS VP DFSI
Sbjct: 121 REAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGELNVSVIVSSVPPDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNI 240
           EAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++F+RHNI
Sbjct: 181 EAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFQRHNI 240

Query: 241 AVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           AVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 241 AVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 280

[Close]

BLAST of Clc02G16500 vs. NCBI nr
Match: XP_008454371.1 (PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis melo] >XP_016901931.1 PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis melo] >XP_016901934.1 PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 493.4 bits (1269), Expect = 1.3e-135
Identity = 248/283 (87.63%), Postives = 264/283 (93.29%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA SRC SGS+M+NFRR II AQSSSD+PAGKSAAEEFAP+  TFRRRLIVGIGSASLVA
Sbjct: 1   MAFSRCLSGSQMINFRRSIILAQSSSDDPAGKSAAEEFAPLAATFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGF---EFIYPASWVGDQR 120
           VGANFAGVTSFLLGLSPEN+RRLRVDV+YPIGGY+RC D NEGF   EFIYP+SWVGDQR
Sbjct: 61  VGANFAGVTSFLLGLSPENSRRLRVDVVYPIGGYNRCFDPNEGFEHPEFIYPSSWVGDQR 120

Query: 121 LLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLD 180
           LLYR AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGELNVSVIVS VP D
Sbjct: 121 LLYREAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGELNVSVIVSSVPPD 180

Query: 181 FSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRR 240
           FSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++F+R
Sbjct: 181 FSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFQR 240

Query: 241 HNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           HNIAVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 241 HNIAVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 283

[Close]

BLAST of Clc02G16500 vs. NCBI nr
Match: XP_022150743.1 (psbP domain-containing protein 7, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131
Identity = 242/282 (85.82%), Postives = 258/282 (91.49%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MALSRCFSGS++  FRR I SAQS SD+PAGKSAAE+FAP+ VTFRRRL VGIGSASLVA
Sbjct: 1   MALSRCFSGSQITYFRRSITSAQSPSDDPAGKSAAEQFAPLAVTFRRRLTVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           VGAN AG+TSFLLG SPEN+RRLR+DV+YPIGGYSRC +ANEGF+FIYP SWVGDQRLLY
Sbjct: 61  VGANLAGITSFLLGFSPENSRRLRLDVVYPIGGYSRCFEANEGFQFIYPESWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           RAAEKSE+ERSLDPPPLT ST  RR +NVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI
Sbjct: 121 RAAEKSEFERSLDPPPLTTSTADRRRRNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN--KYYELEFKVESSSFRRH 240
           EAFGGP EVGEAVIRTIT+ASKR DLKGTLIQTTLREDL    KYYELEFKVESSSF+RH
Sbjct: 181 EAFGGPKEVGEAVIRTITKASKRPDLKGTLIQTTLREDLQRNVKYYELEFKVESSSFQRH 240

Query: 241 NIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           NIAVCCA RGKLYTLNAQAPESEWP LK E+KTIANSFCLSA
Sbjct: 241 NIAVCCARRGKLYTLNAQAPESEWPVLKPEIKTIANSFCLSA 282

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BLAST of Clc02G16500 vs. ExPASy Swiss-Prot
Match: F4J7A7 (PsbP domain-containing protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD7 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 6.2e-93
Identity = 174/275 (63.27%), Postives = 211/275 (76.73%), Query Frame = 0


Query: 4   SRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVAVGA 63
           S  +S    +     +I+ Q S D     + AEEF+P+   F RRL++G+GS+S++A+GA
Sbjct: 8   SLLYSSPTNVKLSNFLIAQQPSGD--LKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGA 67

Query: 64  NFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLYRAA 123
           NF G TSF+LGLSP   R L++DVIYPIGGYSRC+D  EGFEFIYPA+WVGDQ LLYRAA
Sbjct: 68  NFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAA 127

Query: 124 EKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSIEAF 183
           EKSE E SLD PP   S    R +NVNEPVVAFGPPGS+GELNVSVIVSPV   FSIEAF
Sbjct: 128 EKSERENSLDLPPARNS----RRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFSIEAF 187

Query: 184 GGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN--KYYELEFKVESSSFRRHNIA 243
           GGP EVGEA++RT+T + +R+DLKGTL+++++R+D     KYYELEFKVES  FRRHN+A
Sbjct: 188 GGPKEVGEAIVRTVTGSGQRADLKGTLLESSIRQDSERNLKYYELEFKVESPLFRRHNVA 247

Query: 244 VCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSF 277
           VCCAH G+LYTLNAQAPES W  +KSE+ T A SF
Sbjct: 248 VCCAHSGRLYTLNAQAPESAWSEVKSEIYTTAKSF 276

[Close]

BLAST of Clc02G16500 vs. ExPASy TrEMBL
Match: A0A0A0LGE5 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030040 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 9.1e-140
Identity = 252/280 (90.00%), Postives = 266/280 (95.00%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA S CFSGS+M+N RR IISAQSSSD+PAGKSAAEEFAP+ VTFRRRLIVGIGSASLVA
Sbjct: 1   MAFSCCFSGSQMINLRRNIISAQSSSDDPAGKSAAEEFAPLAVTFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           +GANF GVTSFLLGLSPEN+RRLRVDV+YPIGGYSRC+D NEGFEFIYP+SWVGDQRLLY
Sbjct: 61  IGANFGGVTSFLLGLSPENSRRLRVDVVYPIGGYSRCIDPNEGFEFIYPSSWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           RAAEK EYERSLDPPPLT STM RR +NVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI
Sbjct: 121 RAAEKLEYERSLDPPPLTDSTMDRRRRNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNI 240
           EAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++FRRHNI
Sbjct: 181 EAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFRRHNI 240

Query: 241 AVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           AVCCA RGKLYTLNAQAPESEW GLKS+MKTIANSFCLSA
Sbjct: 241 AVCCARRGKLYTLNAQAPESEWAGLKSKMKTIANSFCLSA 280

[Close]

BLAST of Clc02G16500 vs. ExPASy TrEMBL
Match: A0A5A7TYH2 (PsbP domain-containing protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00860 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.5e-137
Identity = 248/280 (88.57%), Postives = 264/280 (94.29%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA SRC SGS+M+NFRR II AQSSSD+PAGKSAAEEFAP+  TFRRRLIVGIGSASLVA
Sbjct: 1   MAFSRCLSGSQMINFRRSIILAQSSSDDPAGKSAAEEFAPLAATFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           VGANFAGVTSFLLGLSPEN+RRLRVDV+YPIGGY+RC D NEGFEFIYP+SWVGDQRLLY
Sbjct: 61  VGANFAGVTSFLLGLSPENSRRLRVDVVYPIGGYNRCFDPNEGFEFIYPSSWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           R AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGELNVSVIVS VP DFSI
Sbjct: 121 REAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGELNVSVIVSSVPPDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNI 240
           EAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++F+RHNI
Sbjct: 181 EAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFQRHNI 240

Query: 241 AVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           AVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 241 AVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 280

[Close]

BLAST of Clc02G16500 vs. ExPASy TrEMBL
Match: A0A1S3BYG5 (psbP domain-containing protein 7, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494788 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.5e-137
Identity = 248/280 (88.57%), Postives = 264/280 (94.29%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA SRC SGS+M+NFRR II AQSSSD+PAGKSAAEEFAP+  TFRRRLIVGIGSASLVA
Sbjct: 1   MAFSRCLSGSQMINFRRSIILAQSSSDDPAGKSAAEEFAPLAATFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           VGANFAGVTSFLLGLSPEN+RRLRVDV+YPIGGY+RC D NEGFEFIYP+SWVGDQRLLY
Sbjct: 61  VGANFAGVTSFLLGLSPENSRRLRVDVVYPIGGYNRCFDPNEGFEFIYPSSWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           R AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGELNVSVIVS VP DFSI
Sbjct: 121 REAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGELNVSVIVSSVPPDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNI 240
           EAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++F+RHNI
Sbjct: 181 EAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFQRHNI 240

Query: 241 AVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           AVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 241 AVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 280

[Close]

BLAST of Clc02G16500 vs. ExPASy TrEMBL
Match: A0A1S4E131 (psbP domain-containing protein 7, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494788 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.1e-136
Identity = 248/283 (87.63%), Postives = 264/283 (93.29%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MA SRC SGS+M+NFRR II AQSSSD+PAGKSAAEEFAP+  TFRRRLIVGIGSASLVA
Sbjct: 1   MAFSRCLSGSQMINFRRSIILAQSSSDDPAGKSAAEEFAPLAATFRRRLIVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGF---EFIYPASWVGDQR 120
           VGANFAGVTSFLLGLSPEN+RRLRVDV+YPIGGY+RC D NEGF   EFIYP+SWVGDQR
Sbjct: 61  VGANFAGVTSFLLGLSPENSRRLRVDVVYPIGGYNRCFDPNEGFEHPEFIYPSSWVGDQR 120

Query: 121 LLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLD 180
           LLYR AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGELNVSVIVS VP D
Sbjct: 121 LLYREAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGELNVSVIVSSVPPD 180

Query: 181 FSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRR 240
           FSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYYELEFKVES++F+R
Sbjct: 181 FSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYYELEFKVESTAFQR 240

Query: 241 HNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           HNIAVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 241 HNIAVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 283

[Close]

BLAST of Clc02G16500 vs. ExPASy TrEMBL
Match: A0A6J1DA91 (psbP domain-containing protein 7, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018801 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.4e-132
Identity = 242/282 (85.82%), Postives = 258/282 (91.49%), Query Frame = 0


Query: 1   MALSRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVA 60
           MALSRCFSGS++  FRR I SAQS SD+PAGKSAAE+FAP+ VTFRRRL VGIGSASLVA
Sbjct: 1   MALSRCFSGSQITYFRRSITSAQSPSDDPAGKSAAEQFAPLAVTFRRRLTVGIGSASLVA 60

Query: 61  VGANFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLY 120
           VGAN AG+TSFLLG SPEN+RRLR+DV+YPIGGYSRC +ANEGF+FIYP SWVGDQRLLY
Sbjct: 61  VGANLAGITSFLLGFSPENSRRLRLDVVYPIGGYSRCFEANEGFQFIYPESWVGDQRLLY 120

Query: 121 RAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180
           RAAEKSE+ERSLDPPPLT ST  RR +NVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI
Sbjct: 121 RAAEKSEFERSLDPPPLTTSTADRRRRNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSI 180

Query: 181 EAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN--KYYELEFKVESSSFRRH 240
           EAFGGP EVGEAVIRTIT+ASKR DLKGTLIQTTLREDL    KYYELEFKVESSSF+RH
Sbjct: 181 EAFGGPKEVGEAVIRTITKASKRPDLKGTLIQTTLREDLQRNVKYYELEFKVESSSFQRH 240

Query: 241 NIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 281
           NIAVCCA RGKLYTLNAQAPESEWP LK E+KTIANSFCLSA
Sbjct: 241 NIAVCCARRGKLYTLNAQAPESEWPVLKPEIKTIANSFCLSA 282

[Close]

BLAST of Clc02G16500 vs. TAIR 10
Match: AT3G05410.2 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 342.0 bits (876), Expect = 4.4e-94
Identity = 174/275 (63.27%), Postives = 211/275 (76.73%), Query Frame = 0


Query: 4   SRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVAVGA 63
           S  +S    +     +I+ Q S D     + AEEF+P+   F RRL++G+GS+S++A+GA
Sbjct: 8   SLLYSSPTNVKLSNFLIAQQPSGD--LKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGA 67

Query: 64  NFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLYRAA 123
           NF G TSF+LGLSP   R L++DVIYPIGGYSRC+D  EGFEFIYPA+WVGDQ LLYRAA
Sbjct: 68  NFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAA 127

Query: 124 EKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSIEAF 183
           EKSE E SLD PP   S    R +NVNEPVVAFGPPGS+GELNVSVIVSPV   FSIEAF
Sbjct: 128 EKSERENSLDLPPARNS----RRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFSIEAF 187

Query: 184 GGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN--KYYELEFKVESSSFRRHNIA 243
           GGP EVGEA++RT+T + +R+DLKGTL+++++R+D     KYYELEFKVES  FRRHN+A
Sbjct: 188 GGPKEVGEAIVRTVTGSGQRADLKGTLLESSIRQDSERNLKYYELEFKVESPLFRRHNVA 247

Query: 244 VCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSF 277
           VCCAH G+LYTLNAQAPES W  +KSE+ T A SF
Sbjct: 248 VCCAHSGRLYTLNAQAPESAWSEVKSEIYTTAKSF 276

[Close]

BLAST of Clc02G16500 vs. TAIR 10
Match: AT3G05410.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 206.8 bits (525), Expect = 2.2e-53
Identity = 108/176 (61.36%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 4   SRCFSGSRMMNFRRGIISAQSSSDEPAGKSAAEEFAPMEVTFRRRLIVGIGSASLVAVGA 63
           S  +S    +     +I+ Q S D     + AEEF+P+   F RRL++G+GS+S++A+GA
Sbjct: 8   SLLYSSPTNVKLSNFLIAQQPSGD--LKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGA 67

Query: 64  NFAGVTSFLLGLSPENNRRLRVDVIYPIGGYSRCLDANEGFEFIYPASWVGDQRLLYRAA 123
           NF G TSF+LGLSP   R L++DVIYPIGGYSRC+D  EGFEFIYPA+WVGDQ LLYRAA
Sbjct: 68  NFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAA 127

Query: 124 EKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFS 180
           EKSE E SLD PP   S    R +NVNEPVVAFGPPGS+GELNVSVIVSPV   FS
Sbjct: 128 EKSERENSLDLPPARNS----RRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFS 177

The following BLAST results are available for this feature:

BLAST of Clc02G16500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889473.1	4.1e-142	93.24	psbP domain-containing protein 7, chloroplastic [Benincasa hispida]	[more]
XP_004144823.1	1.9e-139	90.00	psbP domain-containing protein 7, chloroplastic [Cucumis sativus] >XP_031736676....	[more]
XP_008454379.1	3.0e-137	88.57	PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X2 [Cucumis m...	[more]
XP_008454371.1	1.3e-135	87.63	PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis m...	[more]
XP_022150743.1	1.1e-131	85.82	psbP domain-containing protein 7, chloroplastic isoform X2 [Momordica charantia]	[more]

BLAST of Clc02G16500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J7A7	6.2e-93	63.27	PsbP domain-containing protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc02G16500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGE5	9.1e-140	90.00	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030040 PE=4 S...	[more]
A0A5A7TYH2	1.5e-137	88.57	PsbP domain-containing protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BYG5	1.5e-137	88.57	psbP domain-containing protein 7, chloroplastic isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S4E131	6.1e-136	87.63	psbP domain-containing protein 7, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1DA91	5.4e-132	85.82	psbP domain-containing protein 7, chloroplastic isoform X2 OS=Momordica charanti...	[more]

BLAST of Clc02G16500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05410.2	4.4e-94	63.27	Photosystem II reaction center PsbP family protein	[more]
AT3G05410.1	2.2e-53	61.36	Photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 151..276 e-value: 1.1E-24 score: 87.3
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 90..277 e-value: 2.5E-42 score: 146.6
None	No IPR available	PANTHER	PTHR31407:SF16	PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC	coord: 20..278
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 20..278
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 95..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G16500.1	Clc02G16500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding