Clc02G16030 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGAAATGGCGGCCACAGTTCTCCCCTCCATCTCCTCTCTCACCTACTTATTATGTTAATATCTACGTTTTCCAGATTCATTTTTTGATTTGTATTATTCTAAATCCCTAGAACTGCTAAGCTGCTCTAGTTTTTGGGGATTTTAGGGGCTCGATCTGGTGGGTTTACGGTCAAAATTTGCTGCTTTTTGAGGTCCTTTTTGGCTCGCATTCTGTCGGAAGTTACAAAATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCATCCCTTGGGTTGTGGCAAAAAGAGGCCAAGATCCTTTTCTTAGGGCTCGATAATGCTGGCAAAACGACCTTGCTTCATATGTTGAAAGACGAGGTACGTTTCTTTATGATTCTTTAGTTTAATTTCTCAATTCATTTTGTTCAATCAGTGATTGAAAATCGATTAAATGCATTCCATGGCGAGATAGCAATGTCATTAGTCTCGAATCTTGATTGATTGTTGTTCTTAGATTATGTTTTAGGTCTGGATCATTTCCCAAATGACGGGATACATGGAAATGTTTTCCCCCCGAGGGAATAGATGTTTGGACTTGAATTCAGAAAGCGTAAAATGGTTGCTTTTCCTTAATTTCACGATGTTCTTGAAATCTGATTTGTTGTTTAGATTTACTAGACGGCTAATTAAAGAGTTCATTTGGTTAACTTGTTGTCATATTACAGAGATTAGTTCAACATCAGCCGACCCAGCATCCAACTTCGGAAGAGTTGAGTATCGGTAAGATCAAGTTCAAGGCCTTTGACCTAGGGGGGCATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTATATTTTGTTCACCCCCTTTATTTGTTATTCCCAATTCTCGATGCGTTACATCTATACGGAGAACTGCGTGGGTTGAATGACCCATATTGCGGTTGTATTCTATTTGAGTTTCAGTTGGCCGATTTAATAGTTTTTAGTAGTTTTCTGCAGATAGGAGAGCTGAATTTCGTGAAAAATGCAATTCTTCAACTCCTGTTATTTCTAACTCGAAAGATTGTGAAGTCTGTTTTGAACATTGAACTGTGTCACCAGATTCGAAATGTTTTCGTGCCTCCATAATCCTACTAAGAGTTATTCTTGTCCTTCTGATTCACGGGGGACAGGAAATCTATAGTGTTATTACTATTGTGTCCCTTTTGGGCCTTCAAAATCCTAACTGAATACTTGTTCATTATTTAACATATTTGAGATCCAAGGAATGAGTTAATATGTCCTCTTTGAGGAAAGATCAACATCTTTGCTTCCAAATGTTATCTATGGTTTCACCACATTGATTTCCTCTAAATGTACTTTCTTACTATTTCCAAAATGTTTTTTGCCTTCATAATCCCAGACAAACTTTTTGTATTTTTCTGATTCATGGGAGGCAGAAATTACATGGTTATTTGCTGATAGCATATCTTCTTCTTGAAAAGATCTGCTTATAGTTCATAACCATAGATTGTTTCATCATCAAACCATTCAATTGCAAATCATATTGACTGAATATGTTATACCCCTTTTAACATATTTGAAATCTCATGTACTTCGTTGCCATTTATCTTCTTCGTCATGGAAGATTGAAACCTTTGCTTCAAAATGCTAACTACAATTTCAATATACATTGATTTCATCTACCATCTTTGGGGTTATTTGAACTCTAAGCCATCTCACCGTGTTCAAAATGTTTCCTTGCCTTCATAATCCCGGACTGACCTTGTGTTTTTCTGATTCATGGGAGGCATAAATTATATGGCTGTTCGCTGATAGCATATCTTCTCATTGAAAGGGTCTGCTTTTAGTACATATCCGTACATTTTTTTATTTGTACATTACCGTACTTTCTTAAAAAAAAAAAAAATTAAATTTTAGTACATTACTGTACATTTTTTGCTTAGTTACTAGACTCACCATTTTTTCTAACTTTGAATCTTGAACTGTGTGGCTTTCTTCAAAATGTTCACCGGCCTTCATAATCCCAGACAAACCAATTTGTGTTTTTCTGATTCATGGGAGGCAGAAATTATAGGGTTATTCGCTGATAGCATATCTTCTCCTTGGAAAGGGTCTGCTTTTAGTAAATAACCGTACATTTTTCTTGTCATTTAAACTATTCTTAAACTATAAATTGTACCCACTGATATTTTGTTAGACATTTGCCATATTTGAGGTACAATGTGCTGAATTACCGTATTGCCTTCTCTGTGGAAAGGACTTGCTTTACTTCCAAATACAACCCTACAGTTATCATCGTTTTATCTATCTTTACAGTTTTGGAACTTTGAACCATCTTATTGCTTTTATAATATTATCCTGCCTTCATAATCCCAGACAAACTATTTTTTGTGTTTTTCTGATTCATGGGAGGCAGAGATCACATGGTTATTCGCTGATAGTACATCTTCTACTTGAAAGGGTTTGCTTTTAGTACATAACCATACATTTTCCTCAACAATGGAACCATTCTTTGAAAGTTATACTAGATCCCAAGTTCTGAGGTTTTGTATTGTCTGCTTGGGTAGAGGAAGGATTGGGAATTTGGTTTTAACATACATTGCTAATATTGCTATATTTTAATTCGGAACATTCTCGTTGTTACTAAAATGTTTCCCTGCCTTCATAATCCCAGCATTTTTTTTTTTTTTTTTTTTTTTGTGTATGTGTGTGTGTGTGTTTTTCTGATTCATGGGAGTCGAAAATTTTATGATCATTCGCTGATAGCGTATCTTCTCACTGAAACTTTTAGTACATAACCGCAGATTTTTCTTTGTCACTAAAACCATCCTTCAACTATAAATTATACATACTGATATCTTGCATGTCATTTTAACTTGTGTGAGATCCCTAGTACTTGATTATTATAATGGCTTGTGCAAGGAGGAAAAACGGTAACATTTGCTTCCAAATGCTAACTATGGTTTAACATATAAATTGAATTCATCTACCTTTTTGGCCTTTATCAAGTTTTAAATCACTTGTTTTCTGACACTGTCTCTGCAAGGGACAAGCTACCTGTCATATGATCTTATATGCCATTAGCTGGGTTCATCTGGCCTCGTGTTGCTCGGATTGTATAGTTCCTTATCATGTCAAATTTTTTTACTGAAAACATTACTATTCTTGGGTGAAGGTTGATGCAGTAGTTTATCTGGTCGACGCGTATGACAAGGAAAGATTTTCAGAGTCAAAAAAAGAGTTGGACGCCCTCCTATCTGATGAAGCATTAGCCGACGTTCCATTTCTGATTCTGGGCAATAAGATCGATATTCCGTATGCTGCATCAGAAGATGAATTACGGTACAACTTAGGCCTAACAAACTTCACCACTGGCAAGGGCAAGGTAAGCCTGGTCGACTCGAATGTTCGTCCTCTGGAGGTTTTCATGTGTAGCATTGTCCGGAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAGATTTTATTTTCTTTGTGCTGAGAAACAAATTATTTGTTCAACCTTTTACCTGTCATTCTGTTGGTATGAATCTCTGAGGGGTAAGATCTGCTTTTACCTTTTTCATTTCCAATTGAAACTCCCACACCAAAATTTGATTATAAATGCTGTAGTGAACTGGCTACTCTATTCTTCATTACTTCTCTCTAGATATACTTGTGGACAGTGGACATTTATTTCTCTCACATTGGTACAATGTATTTTTTTTCTTTTGATTTAAAAAATTGCAATGCGGGAGATCAAATTGTCATGTTTGCAAGTTATGCTCAAGTTGACACATCA CTGAAATGGCGGCCACAGTTCTCCCCTCCATCTCCTCTCTCACCTACTTATTATGTTAATATCTACGTTTTCCAGATTCATTTTTTGATTTGTATTATTCTAAATCCCTAGAACTGCTAAGCTGCTCTAGTTTTTGGGGATTTTAGGGGCTCGATCTGGTGGGTTTACGGTCAAAATTTGCTGCTTTTTGAGGTCCTTTTTGGCTCGCATTCTGTCGGAAGTTACAAAATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCATCCCTTGGGTTGTGGCAAAAAGAGGCCAAGATCCTTTTCTTAGGGCTCGATAATGCTGGCAAAACGACCTTGCTTCATATGTTGAAAGACGAGAGATTAGTTCAACATCAGCCGACCCAGCATCCAACTTCGGAAGAGTTGAGTATCGGTAAGATCAAGTTCAAGGCCTTTGACCTAGGGGGGCATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTTGATGCAGTAGTTTATCTGGTCGACGCGTATGACAAGGAAAGATTTTCAGAGTCAAAAAAAGAGTTGGACGCCCTCCTATCTGATGAAGCATTAGCCGACGTTCCATTTCTGATTCTGGGCAATAAGATCGATATTCCGTATGCTGCATCAGAAGATGAATTACGGTACAACTTAGGCCTAACAAACTTCACCACTGGCAAGGGCAAGGTAAGCCTGGTCGACTCGAATGTTCGTCCTCTGGAGGTTTTCATGTGTAGCATTGTCCGGAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAGATTTTATTTTCTTTGTGCTGAGAAACAAATTATTTGTTCAACCTTTTACCTGTCATTCTGTTGGTATGAATCTCTGAGGGGTAAGATCTGCTTTTACCTTTTTCATTTCCAATTGAAACTCCCACACCAAAATTTGATTATAAATGCTGTAGTGAACTGGCTACTCTATTCTTCATTACTTCTCTCTAGATATACTTGTGGACAGTGGACATTTATTTCTCTCACATTGGTACAATGTATTTTTTTTCTTTTGATTTAAAAAATTGCAATGCGGGAGATCAAATTGTCATGTTTGCAAGTTATGCTCAAGTTGACACATCA ATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCATCCCTTGGGTTGTGGCAAAAAGAGGCCAAGATCCTTTTCTTAGGGCTCGATAATGCTGGCAAAACGACCTTGCTTCATATGTTGAAAGACGAGAGATTAGTTCAACATCAGCCGACCCAGCATCCAACTTCGGAAGAGTTGAGTATCGGTAAGATCAAGTTCAAGGCCTTTGACCTAGGGGGGCATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTTGATGCAGTAGTTTATCTGGTCGACGCGTATGACAAGGAAAGATTTTCAGAGTCAAAAAAAGAGTTGGACGCCCTCCTATCTGATGAAGCATTAGCCGACGTTCCATTTCTGATTCTGGGCAATAAGATCGATATTCCGTATGCTGCATCAGAAGATGAATTACGGTACAACTTAGGCCTAACAAACTTCACCACTGGCAAGGGCAAGGTAAGCCTGGTCGACTCGAATGTTCGTCCTCTGGAGGTTTTCATGTGTAGCATTGTCCGGAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDEALADVPFLILGNKIDIPYAASEDELRYNLGLTNFTTGKGKVSLVDSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK Homology
BLAST of Clc02G16030 vs. NCBI nr
Match: XP_038891034.1 (GTP-binding protein SAR1A-like [Benincasa hispida]) HSP 1 Score: 390.2 bits (1001), Expect = 1.0e-104 Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. NCBI nr
Match: XP_008453690.1 (PREDICTED: GTP-binding protein SAR1A [Cucumis melo] >KAA0048058.1 GTP-binding protein SAR1A [Cucumis melo var. makuwa] >TYJ96478.1 GTP-binding protein SAR1A [Cucumis melo var. makuwa]) HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104 Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. NCBI nr
Match: XP_022965960.1 (GTP-binding protein SAR1A-like [Cucurbita maxima] >XP_023538625.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389.0 bits (998), Expect = 2.3e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. NCBI nr
Match: XP_022946417.1 (GTP-binding protein SAR1A-like isoform X1 [Cucurbita moschata] >XP_022999191.1 GTP-binding protein SAR1A-like [Cucurbita maxima] >XP_023545323.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo] >KAG7030125.1 GTP-binding protein SAR1A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 389.0 bits (998), Expect = 2.3e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. NCBI nr
Match: KAG6586226.1 (hypothetical protein SDJN03_18959, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 389.0 bits (998), Expect = 2.3e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 1.8e-104 Identity = 182/193 (94.30%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 4.1e-104 Identity = 183/193 (94.82%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 3.5e-103 Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 5.6e-101 Identity = 181/194 (93.30%), Postives = 186/194 (95.88%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 4.9e-97 Identity = 169/193 (87.56%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy TrEMBL
Match: A0A5D3BE34 (GTP-binding protein SAR1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001230 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 8.6e-105 Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy TrEMBL
Match: A0A1S3BWV6 (GTP-binding protein SAR1A OS=Cucumis melo OX=3656 GN=LOC103494335 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 8.6e-105 Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy TrEMBL
Match: A0A6J1KCD9 (GTP-binding protein SAR1A-like OS=Cucurbita maxima OX=3661 GN=LOC111493648 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy TrEMBL
Match: A0A6J1HQ80 (GTP-binding protein SAR1A-like OS=Cucurbita maxima OX=3661 GN=LOC111465682 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. ExPASy TrEMBL
Match: A0A6J1G3P4 (GTP-binding protein SAR1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450482 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Clc02G16030 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 ) HSP 1 Score: 379.8 bits (974), Expect = 1.3e-105 Identity = 182/193 (94.30%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of Clc02G16030 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B ) HSP 1 Score: 375.6 bits (963), Expect = 2.5e-104 Identity = 182/192 (94.79%), Postives = 188/192 (97.92%), Query Frame = 0
BLAST of Clc02G16030 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 374.0 bits (959), Expect = 7.2e-104 Identity = 180/192 (93.75%), Postives = 190/192 (98.96%), Query Frame = 0
BLAST of Clc02G16030 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 ) HSP 1 Score: 354.8 bits (909), Expect = 4.5e-98 Identity = 174/193 (90.16%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of Clc02G16030 vs. TAIR 10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 201.8 bits (512), Expect = 4.9e-52 Identity = 95/111 (85.59%), Postives = 109/111 (98.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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