Clc02G15440 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCTCAACTGTTTATTACATTTATACCCTTGACAGTTTTTCAGTCACGGCTCAAAAGCTTCAATCGTCGAAGAAGGAAGAAAGAAGCTTTCAATCGGGAAAAATGGTGGCTTCCAATTTGAAATCGGAGACTATGGATCTGATACAGAAAAGGACCGCTATCGAGGTCCAGATGGATGCTATCATTTCGCGCCTTTGTCAGCCTGGCGGTCCTGGACTCTCTGGAAATCTCGTCGACTCCGAGGTGATTGCAATGACTTTTCCCCCTCGATTTCCATGAACCAATGACATTTACTGCAATTCCTCTGAATTCCTGTTTTCCTGATTAGGTTTTGTATTTGAACTCCGAGTGAAAATTTTCGATTCGGCTAGTTTTGTCATTCTCGATTACTACTCTTTTCTTTTTAGGTTTTGTGGGGTAGCTTATAGTTAACAACCACAATTGCATTTTGTTTAATTTCTGTGCTACGTTGTACTTGGAAAGTTGTCTGAAGACTTCTTCATGCTCAATAGAAGATTTATAGGATATTGATGTTGAAAAACTTTGGTATATTGACCATGAATGAGTGGATAATGCTTTTTGGTAGATTTGAGTCAAGCAGAGGCGTGATTGTTTGTTGCAGTACCTTGGTTAGATTTAGTCTGTTTAGAACTTACTTTGTACTCTATTTTTTAATATCTTTTGCAGGGATTTCCACGTTCGGATATTGACATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACTGGTAGGGTGCTAATATTTTCATGATATACACAGTTTTAGTTATGGTGTGTTAAAAAGTATTTTAATAGTAACTTTGAGAGTAACAAAGAAACCGAGCTTTGATGGAGAGAAATGAAAGAACCTACAAGAACATAAAAGAATTAGCCAAATGAAGTAGCCTAGCAAACTACAAAAAGGAACTTCAATCCATAAGATTCTAGAATTTAATACCTTGCCCACAACTCCCTTCGAATCTCACTCCCTCTAAAAATTCTAGAATTCCTCTCAAGCTAAATTCCCCAAATAATAGAAAAAATGAGCATGCCATAGGGTTATGGCCATCTCCCCCAATCTTAACGCCGCACTCTCTACTTCATGCTAGAATCCAGATGGACTCCTAAATGCCCAAGAATTTGCACCAAATTGTCTAAGCTTAGTGGCACCTCCACAGAATATGTTTAAGGTCCTCGGATGCTCCTCTGCATAAAGAACATCACTGATGACCCAAAACGGAGTAGTGTCCCTGCCTGCAATCCGAAGTATTGACTTTCCCATGGAAGACTGAGTTGCTAGGCAGAAAAACTTAACCTTCTTAGAAATCTTTGCCTTCAAGAGTGAGACAAACGATGGGGTGAGGTGACTGGGGGAAGCCAGGGAATGATGAAAAGATAGAAAAACAAGCTGGAAGAGAAGCCCTAAGACAGGCATGGGGTCCAGGAACGCCCTTCTACCATGAAGAATTTGATTGTAAAAGCAAGGCAGAGACCTCCAACAATTCCCTGTCTGGGAGGGCGACAGTGAAACCCAAAAAGTTTTAGCAAGGCAGAGTAAAAAATTTATTATGTTGGTTCTAACTTTCCAATGAGATCTCTTTAATCATAGAGTTATTGAATATTGGATATGGATACTATAATACAAGAATTTTAAGTTGTCTTTAGGATCGTCCTGAGTTGGAAATGTGTTCTTCTCTGTTCTGTGGCTTAGGTGTATAAGGATTTGAATCAAAACATGAAATTTATTCTTATTCCCGTTGTTTGCCATAGTGAGATATTACTTCTGAATGCCCTTGTAATTCCGTTGTCTACTTGTCTTTTCCTTTTGGATGTTCTGCTTCTCATCCAAAAAAAAAAAAAAAAACCTTCATTTTGGATGATGGGATTCAAATTGTAGATTAGAAACTCACTATTAATGTTTTTATGATGCGAAAGATCGACTTATTTTCTTCAAGCATATCACTAAATGAAGATGAGTTCAATTTATAACATTGCTCAGATAAGTTATTATGCTTCGAAGTGTTGATCCGCTATTCTATTTTTCTAGAGCTGAGGAATGACCACATGGAGATCACAGAAAAGATTAATCAGAACATTCAAGTTTTGCATTCTGCAAAGCCTGCTTCTAGCTTGTCACTCTCTAGGGATGCAGGTAATTGTGAGGTAGATGTTATGCTACTGAATGAATCAATGACAATTATCATTTATCCTTGCATGTCTCAATTCCAGCTGCGCTAGATTCTCTATTCCATAGTTAACTAATTCAGGGAGACTTCAACACCTATATACTCATAGTTTGTTGCTTGACTCTCCTTTTTTGTGGGCATCTTTTTTTTAGTATGCCCCTAAAGCTCGGTTTCTCATCATCAAAACATATATTCACATATACAATTTGGATTCTGCTTCATTTTATAAAGAGGTTAGAATTGGTCTTCACGAGTAATTCCTTCAGTTTGGTTAGTTTCCTTACATAATGTTATGTGTTAACAAACCATTCCAATCCCTAAAAATCTGTAGAAGAGGCCAAATTTTCGGTAATATCTTAGTATTTAGTAGTAGCACCCCTTTACTAAAAAAGTTTAGTAGTAGCACCCTCTGAACTCACTACACAAGACAAGACATTATACCTAGAATTAAATCAAGCAAAACATGGGTTATGAGGCGTGAGATGTCTTTTGAAGAAGTTAATTTAATTCTCTGAAATATGGAAGTTGGTGTGTGCTCTTCTACAGTTTTTTCAGACTATTTTCCTTTCCTGATTCTTGCCAATTGGTACCTCTGTGTTGCCTACTTGGCTTTGTGGGAGAATTTCTATCTTCCCTCACGTTCATGGTTTGCCTTTTCCAAGAATTTTGTTTCTTATGAAACAAAAAAGTAACAATAATGATAACCAGAATATTAAATCCATCACATGCCGGCCGATCTCACAAGTACATATATGCTGTACTAGAATCACCTGGAGACATGTCTATTGAAAATTGTCTCAAGATGTATGTTGCGATTTGAATAATCATCATGAGATCAATCCTAATTCTACCTATCTCATTCATCTAATAGGGAATACAGAGGGTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCATCCCCATCCTCAAATGGTATTTCTCAGAGCGACTCTTCCACTACCATGGACATAGATGCAAATGGTATTATACCTTTTGCACTGGTTGATGAAATAGCGGATGCGTCACCTGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATTCGGGAATGTAGAAGGCGGTGATGATCTGTTGCGTAGGCTTGCCTCTGAAGCACAGATTAATCAAGGTCGTCCAATACCTGTTGTGGTTATGAGGCATGGTACTCCTGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGGGGTCTTCTTGGGTATGTGCATTGCACTCATTGCACTCCAAAACACACCTTTAATCACTTAATTCAATGTTTAATTTTACACTTTAATCACATGTTTCGTTTTATTAAAATAGATTTTGATTGATTAAAAGCATTTTGTGAGTGATTTTGAAAATATAGTAAAAGTGATCTGCTAGACTGACCATTAATTAATTCATTGGCACTATTGGGTGCTTGCAGATGCCATTTCCAGATGATGTAGCTGGCTCTACCCACAAGTTCAATCCGCCATGGTTGTTCATCTTTCTGCTTAACTCTCCTCCTGATCTACACTTAATCTACTTGTTTAATCCTAGGTTCCAGATATGTTTGACAAATTTCTCTTAACTAGTCTGGATTTATATCCAGTGATTGCCCCGCCTTGCCCCCATGGAAATCCTGTAAATTGAAATAATAGGATAAGTTGCACTTTTTATGCTATTTTAATCGTGTAAGCTCCTTATTATGATGTCAATCCTTGTTGTTTCTTGTTGTTTCTTGTTGCTTTTTGTTTTGAAACTACTTCAGTAGACATGTTACTCTTCTTGAGAACATTATTTTGTTAATGAAACCAAAAGTTCTATAGTTTCTTA AATCTCAACTGTTTATTACATTTATACCCTTGACAGTTTTTCAGTCACGGCTCAAAAGCTTCAATCGTCGAAGAAGGAAGAAAGAAGCTTTCAATCGGGAAAAATGGTGGCTTCCAATTTGAAATCGGAGACTATGGATCTGATACAGAAAAGGACCGCTATCGAGGTCCAGATGGATGCTATCATTTCGCGCCTTTGTCAGCCTGGCGGTCCTGGACTCTCTGGAAATCTCGTCGACTCCGAGGGATTTCCACGTTCGGATATTGACATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACTGGTAGGGATCGTCCTGAGTTGGAAATGTGTTCTTCTCTGTTCTGTGGCTTAGAGCTGAGGAATGACCACATGGAGATCACAGAAAAGATTAATCAGAACATTCAAGTTTTGCATTCTGCAAAGCCTGCTTCTAGCTTGTCACTCTCTAGGGATGCAGGGAATACAGAGGGTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCATCCCCATCCTCAAATGGTATTTCTCAGAGCGACTCTTCCACTACCATGGACATAGATGCAAATGGTATTATACCTTTTGCACTGGTTGATGAAATAGCGGATGCGTCACCTGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATTCGGGAATGTAGAAGGCGGTGATGATCTGTTGCGTAGGCTTGCCTCTGAAGCACAGATTAATCAAGGTCGTCCAATACCTGTTGTGGTTATGAGGCATGGTACTCCTGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGGGGTCTTCTTGGGTATATGCCATTTCCAGATGATGTAGCTGGCTCTACCCACAAGTTCAATCCGCCATGGTTGTTCATCTTTCTGCTTAACTCTCCTCCTGATCTACACTTAATCTACTTGTTTAATCCTAGGTTCCAGATATGTTTGACAAATTTCTCTTAACTAGTCTGGATTTATATCCAGTGATTGCCCCGCCTTGCCCCCATGGAAATCCTGTAAATTGAAATAATAGGATAAGTTGCACTTTTTATGCTATTTTAATCGTGTAAGCTCCTTATTATGATGTCAATCCTTGTTGTTTCTTGTTGTTTCTTGTTGCTTTTTGTTTTGAAACTACTTCAGTAGACATGTTACTCTTCTTGAGAACATTATTTTGTTAATGAAACCAAAAGTTCTATAGTTTCTTA ATGGTGGCTTCCAATTTGAAATCGGAGACTATGGATCTGATACAGAAAAGGACCGCTATCGAGGTCCAGATGGATGCTATCATTTCGCGCCTTTGTCAGCCTGGCGGTCCTGGACTCTCTGGAAATCTCGTCGACTCCGAGGGATTTCCACGTTCGGATATTGACATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACTGGTAGGGATCGTCCTGAGTTGGAAATGTGTTCTTCTCTGTTCTGTGGCTTAGAGCTGAGGAATGACCACATGGAGATCACAGAAAAGATTAATCAGAACATTCAAGTTTTGCATTCTGCAAAGCCTGCTTCTAGCTTGTCACTCTCTAGGGATGCAGGGAATACAGAGGGTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCATCCCCATCCTCAAATGGTATTTCTCAGAGCGACTCTTCCACTACCATGGACATAGATGCAAATGGTATTATACCTTTTGCACTGGTTGATGAAATAGCGGATGCGTCACCTGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATTCGGGAATGTAGAAGGCGGTGATGATCTGTTGCGTAGGCTTGCCTCTGAAGCACAGATTAATCAAGGTCGTCCAATACCTGTTGTGGTTATGAGGCATGGTACTCCTGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGGGGTCTTCTTGGGTATATGCCATTTCCAGATGATGTAGCTGGCTCTACCCACAAGTTCAATCCGCCATGGTTGTTCATCTTTCTGCTTAACTCTCCTCCTGATCTACACTTAATCTACTTGTTTAATCCTAGGTTCCAGATATGTTTGACAAATTTCTCTTAA MVASNLKSETMDLIQKRTAIEVQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLTGRDRPELEMCSSLFCGLELRNDHMEITEKINQNIQVLHSAKPASSLSLSRDAGNTEGSNGQRSSVTTVASPSSNGISQSDSSTTMDIDANGIIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDLLRRLASEAQINQGRPIPVVVMRHGTPVNLTVTPRSWQGRGLLGYMPFPDDVAGSTHKFNPPWLFIFLLNSPPDLHLIYLFNPRFQICLTNFS Homology
BLAST of Clc02G15440 vs. NCBI nr
Match: KAA0056101.1 (26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo var. makuwa] >TYJ96416.1 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo var. makuwa]) HSP 1 Score: 392.5 bits (1007), Expect = 3.1e-105 Identity = 210/242 (86.78%), Postives = 214/242 (88.43%), Query Frame = 0
BLAST of Clc02G15440 vs. NCBI nr
Match: XP_008452876.1 (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo]) HSP 1 Score: 389.4 bits (999), Expect = 2.7e-104 Identity = 209/240 (87.08%), Postives = 212/240 (88.33%), Query Frame = 0
BLAST of Clc02G15440 vs. NCBI nr
Match: XP_038889104.1 (26S proteasome non-ATPase regulatory subunit 9 [Benincasa hispida]) HSP 1 Score: 388.3 bits (996), Expect = 5.9e-104 Identity = 210/240 (87.50%), Postives = 216/240 (90.00%), Query Frame = 0
BLAST of Clc02G15440 vs. NCBI nr
Match: XP_004144734.1 (26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus] >KGN61045.1 hypothetical protein Csa_021342 [Cucumis sativus]) HSP 1 Score: 386.0 bits (990), Expect = 2.9e-103 Identity = 207/240 (86.25%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of Clc02G15440 vs. NCBI nr
Match: XP_023545321.1 (26S proteasome non-ATPase regulatory subunit 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.9 bits (943), Expect = 8.3e-98 Identity = 202/240 (84.17%), Postives = 206/240 (85.83%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy Swiss-Prot
Match: Q3SZ19 (26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus OX=9913 GN=PSMD9 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 5.7e-17 Identity = 66/234 (28.21%), Postives = 112/234 (47.86%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy Swiss-Prot
Match: Q9WTV5 (26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus OX=10116 GN=Psmd9 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.7e-16 Identity = 65/237 (27.43%), Postives = 119/237 (50.21%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy Swiss-Prot
Match: O00233 (26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens OX=9606 GN=PSMD9 PE=1 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15 Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy Swiss-Prot
Match: Q9CR00 (26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.1e-15 Identity = 63/237 (26.58%), Postives = 117/237 (49.37%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy Swiss-Prot
Match: Q9VFS8 (26S proteasome non-ATPase regulatory subunit 9 OS=Drosophila melanogaster OX=7227 GN=CG9588 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.2e-12 Identity = 67/243 (27.57%), Postives = 111/243 (45.68%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy TrEMBL
Match: A0A5A7URF2 (26S proteasome non-ATPase regulatory subunit 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00430 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.5e-105 Identity = 210/242 (86.78%), Postives = 214/242 (88.43%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy TrEMBL
Match: A0A1S3BUX8 (26S proteasome non-ATPase regulatory subunit 9 OS=Cucumis melo OX=3656 GN=LOC103493762 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.3e-104 Identity = 209/240 (87.08%), Postives = 212/240 (88.33%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy TrEMBL
Match: A0A0A0LGM6 (Nas2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035450 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.4e-103 Identity = 207/240 (86.25%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy TrEMBL
Match: A0A6J1KBP8 (26S proteasome non-ATPase regulatory subunit 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494014 PE=3 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 3.4e-97 Identity = 201/240 (83.75%), Postives = 205/240 (85.42%), Query Frame = 0
BLAST of Clc02G15440 vs. ExPASy TrEMBL
Match: A0A6J1G4X8 (26S proteasome non-ATPase regulatory subunit 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450858 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 1.3e-96 Identity = 199/240 (82.92%), Postives = 205/240 (85.42%), Query Frame = 0
BLAST of Clc02G15440 vs. TAIR 10
Match: AT5G57950.1 (26S proteasome regulatory subunit, putative ) HSP 1 Score: 251.1 bits (640), Expect = 1.1e-66 Identity = 138/240 (57.50%), Postives = 173/240 (72.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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