Clc02G14935 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGATAAATATGCTCTTAGAGATAACAAGTGGTTGACATATTTGTTTGAATTGCGAGAAAAATGGGCAATGGTATATAAGCGACATGCTTTTATGGCCGATATGAAAAGTACACAACGTAATGAAAATATGAATGAGGTATTTAAACAATATCTAAGGCCTGGTTATGACATTTTGCAATTTGTCCTACAATATGATATAATATTGTACTTTATTAAATAATTATGGAAAGTATTTAATAGAAATCTAACGTGGATACATTTGTCTTTTTTTAAAAAATTATCTAATAAGTAAATGAATACTTAGAGAAATGTTTATAGCTACTTATGGTAGGTTAGATGTAAAGTTTCAAAATACATTTGATTTTTTGTTGATTGACTATTTAAAATTAATGTAAGAGTCAAGATTGTTTGTACAAAATTTAGAGAGAGAGAAAAAAAGACATTTGATAGTTGAAAGACAAATAGAATGTTATAAGATTTTCAAAATAGTTTAGAACATTTGATAGCATCACATATTCAATTCTTTGGTTGACAGATTCTTTCGCGACTGATCGAATACAGAGACATTCTTCCTTTGTCTAGAGGTTGCAGTGTGTATTCTCTAGGAGGAGGCGTATGAGGATCTACATCATTTGTTGCAGCGGAGTCAATTTTCTTGTTGGTTTTGGAATTGCCTAATCAAAGTTTTTGGGTTGAGCTTCAGATTGACATATTGTAATACAATTGTTGCCATTTTTGGAGATGGGTATTTGGTTCGAGAGGAACAGTAGAATCTCGAGAGGTATCGTGGGAATGTTTCGTTCTTTGTTAGGTTTAATGCCTTGCTTTGGATGTTTGTGTCTAAAGATTTGGGATTCTTCCTTAGATCTTATTGTGTCTCCTTTGGGTTGTTTCAATTAAAACGTTGAACGAATAATTGTATCAATTAAAATCATAAACCTTTATTAATTTTAATTTAGAGTTAGTTGCAAATATAGTAATTAGATTTAAAGTATTTGCAGATGTCACACAATGTAAAAAAAATTGCAAATATAGCAAAATTTAGATTTTGGTTTCAAAATCTATTTGTGATAGACCATATTGATAGCATGATTGGTGAAGACTAAAGTCTTGAAGAAATCTTGGATTAGAAATTTTATTAATGATCTAAAGTGAATGATAATAGACCTAAAGGGAAAATGGTTTGTACACACCTAATTAACTAACTAACCTAACCTTCTTTAAATAGACCCAAAGGAGAAGGATTTTGCCACACCTAATCTAAAATTGAAATTGAATTAAAAAGAGAATACAATCTGTCATTTTACAAGAGACATCCAAAATACCCTTATTTTACAAGAAATGTCCAAAATACCCTTGATATCTCTATATCAATTTGACCCCTTTAGGATTGAACTCGTCTTTGAGTTTTAGGTTGAAAGCCTGAACTCATTTGGGGCTTGATAAGGGAAGATGTCTGCTACATTGAAGGTATTGCTTATGTTGAATGAAGTTGGGAGATCTATCTTTTAAGCATTATCATTGAATTTCTCAAGGATGTAAAAGGTCCAAATCTTTTGTTGTTGAGTTTGTTGTATGCTCTTTTAGGTAATTTGTCTTTAAGAAGATACATTATTACAAGGTCTCCAAGTTTGAATGAAACATGCCGTTTATGAACATCCGCTTGAGCTTTGTATGTAGAGGTTGTTTTCTCTAGGTGTTCAATGACTTCCGATTGTAACTTTTGAATGCGTTCAACAAGTTGTTCAACTGCTTCACTAATATCTACATTAGAAGGAAGAGTTGTGAGATCAAAAGTCAAATGAAGAGGTCTAGTATGTACAATATCAAATGGACACTTCCCTGTTGATCTATTCTGCATATTGTTGTAGGCAAATTTTGCTTGTGCAAGGTTGGTGTCCTACTGTTTTGGTTGATTTTCACTAAACATCGGAGCATATTACCTAGTGTTTGATTTGTAACTTTTATTTAACCGTCAATTTGTGGGTGGCTTGAGGAGCTAAATTTTAGGTTAGTGCCAAATCTTTTCCACAAGTTTTTCCCAAAAAAAAAAAAAAAAAAAACTCATAAATTTAACATCTCTATCCGATACAATTGTATTTGGAATTCCATGAAGCATGACAATATCCTTACAACAAAGATTAGCAATGTTCAAAGCATCATATGTTTTCTTACAGGGTATGAAATGAGCCATTTGGCTAAATTTATCAACAACAACAACAAAGATAGAGTCACACCTTCGTTGTGTTCTTGGCAATCCTAGAATAAAGTCCATTGATAAGTCTTCCCAAATATTAGAAGGAATTGGGAGAGGAGTATACAATCCGGTGTTTTGAGTGTGACCTTTGGATGTTTGGCAAGTGAAGCATTTGTTGACTAAGTTGTTGGCATCCTTACGAAGTTGAGGCCAAAAGAAACGTGTAACCAGAGTTTCATAAGTTTTGTCACGACCTAAATTTGTTGCTAAGTCGCCCGAATGAGCTTCCATGATGATAGCCTCTCGAAGAGATCCTTGTGGGATGCATAACCTATTACCACAAAATAGATATCCATCCAAAAGGTGGTAGTCTCTAGGATGGAAGTTAGAAAAATATTTTTGCCAAATATCATGGAAATCGGGGTCATTTTTATAACAATTTGGTAAGTGATCAAAGACAATAATATTACTTTGAAGCATGGTAAGCAAGGATGATTTTCTACTCAAGCCATTGATCACTTTGTTGGTAATTTTGGAGGTATGCTTGATGACAAAATCAAATTTTTGTATAAAAGAAATCCATCTAGCATGCACTCGGTTTATATTCTTTTGAGAATATAGGAATTTTAAAGAGTAATGATCGGTTATTAACACAAATTCCTTGCCTATAAGGTAATGTTCCCATTGATGGAGGGCTCAAACTAAAGCATAAAGTTCTTGTTAATTGGTGGACCACTTTTGTCTAGCTTCACTTAGCTTTTCACTAAAAAAGTTCAAAGAGTGAGATTCTTGTGAAAGGACAGCCACGATGCCTATAGAACTTGCATCGATTGCTACTTCAAAAATTTTTGTAAAGTCTGGAAGGGCCAAAACTGGTGGGTTGGCTAGTTTTCTTTTAAGGCATTAAATCTATCCAAAGTCTCTTTGGACCATGCAAATTTACCTTTCTTTAAGTAATGAGTCAAAGGGACAGCTATGGAACTAAAATTCTTCATAAATTTGTGGTAAAAAGATGCTAAGCCAAGGAAAGATTAAACCTCTTTGACTGATGCAGGTGTTGGTCGCTCTTTGACGGCTTCAATTTTTTAAGGATCTGCTTGGACACCTTCTTGTCCAGTGATGAAGCCAAAGGAATTTGATGTTACTGCATATAAAGTATTAGATTCAAGGATGGAAAGTACTTCCTAAAGGTGTATAAGGTGGTCATTAACAGTCTTGTTGTAAATTAGAATGTCTTCAAAGCAAATGACTACAAATTTGTTGATACAAGGTAGAAATATTTGGTTCATGAGCCTGGTAAAGGTGCTAGGTGTGTTGGATAGCCCAAAGGGCATTACTAGCTATTTGAACGATCCTTGGTTAGTTTTGAATGCGGTTTTCCACTCATCCCCAGTCTAATTCTTATTTGGTTATATCCACTATGAAGATCCACCTTGGAAAACACCTTTGCACTGGCTAATTGGTCGAGTAGGCCCGGAATTCTGGGGATTGGGAATCTATATTTGATTGTTATCATATTGACCACATGGTTATCTATGCATAAGCGCCAACTACCATCTTTTTTTGGAGGCTAAAAGGGTTGAGACAACACAAGGTCTAAGGCTAGGCTGGATATGTTGATCTTGAATGATAGCTTGGAGGGCTTGGACTACTAGGGCTCATTTGATAGTGGGACAAGTGAGGTAAAGACGATTTGGGGATGAAATCTATGTTATGTTGGATGTCTCATAGTGGAGGTAGCTCATTTGGGACCTTGGTAATGGAAGGAAATTTGGCTAAAAGGTTCTGCACCTTGCTGTCCACCGGGGTTGGTAACGAGGCCTCGGATTTTTCATGGACAAATAATGCTAGTTTGAATGTATTTACTTTTGTCCATGCTTGTTTGTAAGACATGATAGAAAATAAGTTGGCCTTGTGTTTCTCCTTGATGGTATGTTTGCTCATAGGAGTTTTCAAATCAATAGGTACAAGGATCACCTTTTTACCCATCCATTCAAACTCATAGGTGTTGCCATTCCCATTGTGTTTGGTATGGTTATCATATTGCCACGGTCTTTCAAGTAGAATGTGATGAGTGTCCATATCTAGAAAATCACATATGATTTGATCTTTGTAATGTGTTCCAATTGACAATGGAACTGTACAAATTTCATTAGCAACAACTTCTCCCCCCTTTTAATCCATCCCACTTTATAGAGGCTTGGATGAGGGTTAACTTTCAATTTAAGATGTTGCACAAGTTTCTTAAACACCATGTTCTCCGAGCTACCACTATTAATAATAACGTTGCACACCTTTCCATTGATGGTACAACGGGTTCTAATCTAAACAACGCATGTTTTTGTGGATTCATTTCCATTACTAGAGTCAAGAAGACCTTTTGGATCATACAAGAGAATCTCCCTCATCTGGTTGGGCCACATTGATGTCTTCTTTGGAATAATCCTCATTCTCGTCATCCTCATGTTCTTGAATTATGAGGTTCTTCCTTTGGGGACAATTGTTAGAAAGGTGTCCCGTTTGACCACACCTAAAGCACTTGCCAAGGTTAGGTCTATTATAAGGATTATTGTTATTTCTAGAAGAAAAAGTAAAAGGACTTCCCTCTAGATTCAACTTCTTTCCCCTTGTTTTTGGTAGGTGCATCATGCGACTGCCCTTTTGAAGTTTATGCTGTGGACTTTCTTGGTGTTGCTGAATTTTTATCCCAATTGCTCCTTCGGCTTGCCCGTTGTTTCTGTTTTAAGGCCTCATCTTCTTCAATTGGGGAGGCTATGGACTTTGCTTCTGCCAAGCAAGATAGGAATTGA ATGTTGGATAAATATGCTCTTAGAGATAACAAGTGGTTGACATATTTGTTTGAATTGCGAGAAAAATGGGCAATGGTATATAAGCGACATGCTTTTATGGCCGATATGAAAAGTACACAACGTAATGAAAATATGAATGAGGTATTTAAACAATATCTAAGGCCTGGTGCATCATGCGACTGCCCTTTTGAAGTTTATGCTGTGGACTTTCTTGGTGTTGCTGAATTTTTATCCCAATTGCTCCTTCGGCTTGCCCGTTGTTTCTGTTTTAAGGCCTCATCTTCTTCAATTGGGGAGGCTATGGACTTTGCTTCTGCCAAGCAAGATAGGAATTGA ATGTTGGATAAATATGCTCTTAGAGATAACAAGTGGTTGACATATTTGTTTGAATTGCGAGAAAAATGGGCAATGGTATATAAGCGACATGCTTTTATGGCCGATATGAAAAGTACACAACGTAATGAAAATATGAATGAGGTATTTAAACAATATCTAAGGCCTGGTGCATCATGCGACTGCCCTTTTGAAGTTTATGCTGTGGACTTTCTTGGTGTTGCTGAATTTTTATCCCAATTGCTCCTTCGGCTTGCCCGTTGTTTCTGTTTTAAGGCCTCATCTTCTTCAATTGGGGAGGCTATGGACTTTGCTTCTGCCAAGCAAGATAGGAATTGA MLDKYALRDNKWLTYLFELREKWAMVYKRHAFMADMKSTQRNENMNEVFKQYLRPGASCDCPFEVYAVDFLGVAEFLSQLLLRLARCFCFKASSSSIGEAMDFASAKQDRN Homology
BLAST of Clc02G14935 vs. NCBI nr
Match: XP_031741897.1 (protein FAR1-RELATED SEQUENCE 5 isoform X1 [Cucumis sativus] >KGN50450.1 hypothetical protein Csa_000454 [Cucumis sativus]) HSP 1 Score: 95.1 bits (235), Expect = 4.0e-16 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Clc02G14935 vs. NCBI nr
Match: XP_011462919.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 88.6 bits (218), Expect = 3.7e-14 Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc02G14935 vs. NCBI nr
Match: XP_040364377.1 (protein FAR1-RELATED SEQUENCE 5-like [Rosa chinensis]) HSP 1 Score: 85.1 bits (209), Expect = 4.1e-13 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Clc02G14935 vs. NCBI nr
Match: XP_024196153.1 (protein FAR1-RELATED SEQUENCE 5-like [Rosa chinensis]) HSP 1 Score: 84.0 bits (206), Expect = 9.2e-13 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of Clc02G14935 vs. NCBI nr
Match: XP_030964544.1 (protein FAR1-RELATED SEQUENCE 5-like [Quercus lobata]) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 9.2e-08 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy Swiss-Prot
Match: Q5UBY2 (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=FRS1 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.8e-04 Identity = 19/54 (35.19%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy Swiss-Prot
Match: Q6NQJ7 (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 4.7e-04 Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy TrEMBL
Match: A0A0A0KLA3 (Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_5G175740 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy TrEMBL
Match: A0A2N9F123 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8376 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy TrEMBL
Match: A0A2N9F688 (Protein FAR1-RELATED SEQUENCE OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14319 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy TrEMBL
Match: A0A2N9FFR6 (Protein FAR1-RELATED SEQUENCE OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13837 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc02G14935 vs. ExPASy TrEMBL
Match: A0A2N9GV28 (Protein FAR1-RELATED SEQUENCE OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31317 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.4e-13 Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of Clc02G14935 vs. TAIR 10
Match: AT4G38180.1 (FAR1-related sequence 5 ) HSP 1 Score: 57.8 bits (138), Expect = 6.6e-09 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Clc02G14935 vs. TAIR 10
Match: AT4G19990.1 (FAR1-related sequence 1 ) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05 Identity = 19/54 (35.19%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Clc02G14935 vs. TAIR 10
Match: AT4G19990.2 (FAR1-related sequence 1 ) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05 Identity = 19/54 (35.19%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Clc02G14935 vs. TAIR 10
Match: AT1G76320.1 (FAR1-related sequence 4 ) HSP 1 Score: 45.4 bits (106), Expect = 3.4e-05 Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of Clc02G14935 vs. TAIR 10
Match: AT1G76320.2 (FAR1-related sequence 4 ) HSP 1 Score: 45.4 bits (106), Expect = 3.4e-05 Identity = 20/58 (34.48%), Postives = 34/58 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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