Clc02G13900 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G13900
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	B3 domain-containing transcription factor VRN1-like
Location	ClcChr02: 26141925 .. 26149193 (-)
RNA-Seq Expression	Clc02G13900
Synteny	Clc02G13900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCCTCCCGTCACCGGCGAAACGACGTCGTTAAACGACCCCGTAAAGCGTCAGACAATCCGCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCGAGGAACAAAAACACTTGCAAGCAAAAGTAAAGTATATATATCTAAGTCTCTTCTTATTTGGCTTCTTTTTAATTAAACTCTAAAATGTGGGTTTTCTTTACTCTTTTATGTTTAGGAAATTCCAAAAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTAAAGGTGGCCGATGGCAAAGAGTGGAATGTGAGATTGACAAAAAGTAATAATGGAAAAGGAGTGTGGTTTCATAATGGTTGGCAAAACTTTGTAGAGTTTTATTCTGTTAAATTGGGTTACTTTCTTGTGTTCAAATATCAAAACCAATCTTCCAGTTTCTATGTCCTCATCTTTGATCTTACTGCCATGGAAATCGAGTATCCAGTTAAAATCATTCATCTTAATGAAGCTAAGGATAAGGTGAAAATGGAAACATATTTTGATGATGATCTTGACCTAGGTATGTTTCTTTTTTTTTTTTTTTTTTTTTTTGGACTCTATGGATTTTTTCATTTTAGTTTTTAAAATTTTTAAAATATCAAGTTTAATTTTTTTCAATAAAAAAAAAAAAAAAAAAAAAAACATGTCAAGATACAATTAGGGTTAGTACTTTAATCTTCACCATGTCTAACTTAACCCCTTTAATTTATTTATTTATTATTATTATTATTTTTTTTTTTTTTGAAAAAACCATTTCGATCATGGTTGGTTTTAACACCCACGCATGTTGTAGTTGAGCAAAATAGTTAATGCAAATACTAAATTGGATTTGAATTATTTAGATATTTGGTAACTATTAATTTCGTTTTTAATTTTTAGCTTTTGAAATTTATGCATGTTTAATTCCTAAGTTTGGTTTTTTATTTTTTCATAATTTTCACTTTTATTAAAGAAACACGTTAACTTTGAATCAAAATCTAAAAACAATAACAAATTTTTTTAAACTATTTTTTTTTTCAAAACTTTGACTAAATTTTTTAGAATATTAATAGAAAATAGTAGACAATATAACCTAGGAATTTTGAGGTGAAAATAAAATTTGTAGGTTTAATTTAAAAAAAAAAAAAAAAAATACTAAATGATTATGAAAGGTGTCTTATAGCATCTCATTTTCATTTTGTAGATTTCAAAGTCGGAAAAATTAGCTTGGATGCCAGAAAACCGATGAACAGCGGGCAGAAGCCGCCATCGACAGGGAGCCAGCGAGCAAGGGCAATGGAAAATGCTACCGCTTTTCAATCCACCACTTTGAATCCTTCTTTCGTCTCCAAGATTTGGCCTTCACACATTCATCTCGGAAAATTTCTTGTAAGAAAATTTAACTTCATTTTTTCTGCAATAAAAAACGTAGTATTTATATGAATTTTGACTCACTTTTGAAAAAAAAAAAAAAAAACCTATCGAAAATAATTACAAATATAGTAATTTTTTATTTTCTATATATGATAATCTGCGATAGATTCAGATAGACATAAATAAATATCTATTTAGTTAAAATTAAAATTTTGCTATATTTATAAATAGTTTGATATTTTTTTATTTATAATAATTTTTCAAAAAATATATTCTTGTTGCACATTTTCCAATTTCCAAGATTCCTTTTCTTATGAATTTTTTTTTCTTAGACGTATTCAAAATATATGGTTGTTTTGATATATTTCTAATAAGTTTTAAAAAACAATATTCATATAAAAAAATGTTTTTTTTCAAATATAGCAGAAGTAACCAAAATATTTATAAATATAGCAAAATTTCATCGTGTATCTACGATAGATCATAATAGACTACTATCTATGTCTTGATAGACACAGATAGACTGTGCATTTTGCTATTAGTTGTAAATATTTTTAGTAATTTTACCATTTAAGATAATTTCTCTATAAAAAAATCCTCAACGATAAGTTTCTAAAATGACAATTATATATTTCTAATATGTTTTAGAAAAAATAATTAGTCAAATAGTTTTAATAAATCTTAAAATAAACTAACGAGTATAGACGAAAATTGGATATTTAAAACATATAAGATCAAAATGAAATGAAATTTTTTAATTTTATTTTTTTCTTTTATCTTTTTTGTTTTCGGTGAAAAGAATGTACCAAAAAGCTTTGCTAAGATGCATCTAGAAGAGCCCACAGGGATCATTCTCCAAGTTTCGGATGGAAGAATGTGGAGCGCTCGTTGTCGCTTTTATTGGACTCCTACAAAGCAAAGGATGACGGACTTTAGATGTGGTTGGAAGAATTTTGTTCGAGACAATAACTTAAAAGTTGGCGATTTCTGTGTTTTTTAGATGATTGCGAAAAACAGTAGAAGAATCTATTTCAAAGTCTAAGTTTTTCGAGCTTCTTGATCAACCAAATTAACTTGGAAAAACACTATTTTGGAGGTTGATTATATTTTAGGTGTTTTGAGAAATAGTGTAATGTTTTTGTTATCTTAATCACATGTTTTATGTCTATCTTCATCATATGTGAGGAACTTGTGGCTTGTGTGTGTGTTTTTTATTTTTTATTTATTTATTTATTTATTTTTATTTTATTTTTTTTTTTTTGTCATGGTTTTGCAAATTGAAAATGCAAAATCATATGGGTTTTACTAGTTAGAATTGGATATGTTTTGAGATTTGTATACATTTTCAAATCTCAGTTTCATTAAAACTTTGGTTTAGTTTTCTAATGGTTAAGATTATAAGTTTTAGAGGGTCTTTTATTAGAATTTTAGTATAGAAATATTATGTAAATGTGCGATTAAGTTAATTTTAAGAAATATATAATTAAAATTTCCCTCGAATTTACTCACGGAATAAATAATTAATATTGAAAATTTTTCAGTAATTAATTTTAAAGAAAATTAGATAAATTACAATTAAAATTTAGCTAATTCCATAGACTTCTTAAAGCATCAAATTGACCATAAACGAAGAATTAATAAATGGCGGATCCTAATCATCAAAAAAGGGGGGAAAATCAGAACTTTTGTTTTCAAAATTCAACAAAGACTCAAACCTCTATCCTTGAGTTTGCAATTGATTATAATTATTTAACTACAATCATTTGTGAAGAAAAACTTTAGTTTTAAAAAAAAATGTAGAGTAGAGATAGATATCAACCTCATAATGTCATAATTAACTAGCTGAGGCAGTTTGTTGATTTGTGTATATGTAAATTGATATATAAAATGATTTGCAATTAGCTCAATTTAAATTGGAATCCCCATCCTGGATTGAATTATTACTTTAGAAGAAAAAAAAAAATTTTGGTACCTGAACTTTAACCCTAGTAAGTAATAAATTAGTAGTACAAATTCATACCAATTTAATTTCTATCATAAAATATTTCATTAAAATTAAAAGTCAATTTTTTTAATTATTTAATAATGTAAACTTTGTAGCTTTATAAACATTTTAGGATCCATTAGTTTATGCATATATCCGTGAGAAAAAATCTTCTTAAATCCTAACACAAATTTTCAGGATAGCGATTGAATCATTACAAATATTAATATACAATAACTGAATTATTACATATATACTAAAGTTGAAGGACTAACTTGTTACAAAATTGAAAATAAAAGAACTAAATTGTTAGTTACTAGAGTTTAAAGACTAAAATGTTACTTTTGAAAAAGACCAAGGATCAAAAAGTGATTTAAAAAAGTCTCCACAACTAAATTAAAGGGAGTTAATCTTTTAAAATTACGTGAAACATGTTTTTAATCATTCAAAACTAATTTTGATGATATAAAAATTGTATAAAAGTATAAAATTGAAAACTAAATAAATTTTGAGTGATTAAAAATGTGTTTGATTTTAAAATCACTAAAAAGATTTAAGTAGGGTTACAGTATCTAAAACTCCAAGAGTTGAAATTTTGTATTAATGATCCTATGAAGTCATTACCATATAGCTACATGCAAACACCATCTTTATATACGTTTAAATTGTAGCATATAATTTCAATTGTGTTTTTTCTTTTAAAGGGAGCATTTCAATAATCACATAAAATAATTACAGCCACCCTAATTAAAAAGACAATAAAACTAAAAGAGAAAAATTAGAGATCCAAAAACGATACCCGTTTTTTATAAAAGAAGAAAGTCTTCGATTAGATACAAAAGCCCTCGCAAAAGCTTTACGAACTACACAGTGGACAACTTACTTTTCAGCCCTAAAACAGTGGCAAAAACTCACACCACCAACCAAATAGTATCCGTGTTCAGATGAATTTTGAGGAAAGAGAAATAATAATAATTCAAATATTCTTGTACAAATTGATAGTCATAGTCATTTAATCTTTTCTAACAATCAGTTTGAGTATAATTCAATAGATTAAAGCATTTATATTATCATTTCAAATATCAAGAGTTTTGATTTTTCACTCTCACAATTATATTAAACTAAAAAAAAAGGTTAAAATGAAATCATTTACGAGGGTGTTTTCTCAATATGGGATATTTTAGCTTTGTTGTGTTCCTTGTTTTTTTCAATCTTTTCACAATTCTATTTCTAAGAAAAAAGATTCGACAAAGATAACAGTAAGAGATTAAGGAAAGATTAATAAAAGAGATTACCAAGCTAATTTAGAGACGTTTGAACTAATTACTGATTTCACTCATTGATTACTCTATCAACAATATAATTTCTTAATTGAACCCGGATCGACAATTAATTGGGCATGATAGTGTTTCATGCTAATTGACTAGCCACGGTAAGCGGATTAATTAGGAGGCTAAAAATAATTAAATTGATGAAATTCAATTAAATGTTTTCCTATTCCTAAAGAATGTTATATGCACTATGGACAATCCAGAAGAAAATGTCGTAGACTAATCATAATCATAATCTAACCCCATTCTCTACTCAAATTAAACACAAAATATGGATCACTAACATATGCATATATATAGCAGACATGAACAATCAATATTTTAAGACATTAGTTTGCCACATTAACTTATACTAATTGCTTATGGATTAAACATGGAATGAAAGAAAACAATCAATCAACAAATCAATTAATTACATTAAACCTAAAGTCTCACAAAAGAAACCATAAGTTCAAGCCCGACCTACCACTCAATTGAGATTATGAGCCTAGCCAAGGGTGAAACTTTGAATCTCGACTCCATATAGTTGAAAACAGAGAAAAACAAAAGGAAATCTAAAGAGATTTGGCTAAAATTGATTTGACTATAACTTTATAAATTAGACTTAGGGAATCCACTCAAAAGAATGTATTTATAGAAACCGCAAGATTGTTCCAATGCTCCAGGACACAATGTCGTCGCAACGTTTTGCTGATGACCTTCTTGACAACAATCTTGACTTCGTTCTTCAGCAAGCATTATGAAGCTTTGAGCAGAGCGTTGTGACACTCCTAGTAGAGGCATTTTTGTCTTTTTTTCTATGTTTGGTTCCTACAAATAAACCATTGAAGCTCATAAAATCGCTCAAATTGGCTAGCACAACTTATCGAGTCTCATATAGCTCTTTTATGGAGCTATTTGATTGGATTGGGTTCTTCTAATCTGAGACCATGAGTGAGTTTGGTTTATGACATCTTCAAATCTGAGACTATGCTATTTACAAACACATTATAGAGGAGAAGTTTAAAAGTTTGAGCAATTATTCAAAAAATCAAAGTAATGAAATTGGATTTTTTTTTTTTTTTTTTTTTTAAGGTGTGGGACTTGGGAGGCATTTTTTATGAACCTCATACTTCCCTTATGAGTCTTCTTCACATTCTCATTCTCTTCATGATTTTTAAATCAATTCTTCATGACTTTGTTTATCTTCCTTTTTTACTTAAACTTCATGGCTCTTTCTTTATTCTCACACAAATAACTCAAAATATCCAAAACAAAAAACTCTCTCTCTCTCTCTTTAATGGCTCTCTTCAGTTCCCCAAATCCCCATTTCTTCAAGATTATTCTCCACCAAACTCTCACCCAACGAAAGCTCGTAAGTAAACAAACAAACCACATTTTCTAATTTCTCTTCATTTCTTTATTTAATTGATCTCTTTTCTTCGCAGGAGCTTCCAAACAAATTCGTCAAGAACAATGGCGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGACGGCGCCATCTGGAAGCTCCAATTCAAGAAATCGGACGCCAAAATCTGTTTCCTCAAAGGCTGGCCGGAATTCGTCCAGTTTTATTCTATCCAACCTGGACATTTACTTGTGTTCCAATTGAAATCAATTTGCTGTTTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGCACCAGCCGCCGGTTCTGATTCCGAAAAGTGAAAACGAAGATGAAGAGGAATCTGTTCGGATAGTGAATGAGGCGGTTTTGAAGAAGAGAAGAAGGGAGAACGACAAAGAAAGGGCGGCGTCTTGTTCCTTACGAGAGACGAAGAAGATGATGAGGAAGAATGCGAAGATGAATAAAAAGCATCGAGAATTAACTAGCGATGAAGATGAAGAAGATCTGGAAACGAATTACTCAAGGAGACAGAGTAATTACAGAGAATCAGGTTTTTCCGTTTAATTTCTGTAAAATTTAATTTGAATTTCAGCTATCAATACTAAAAATGGATGAATATAACACTTACCGATTTCAGAGGGCCGAGTCAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGATGCCGCAAGCTTTGACGGAGAATCAATTGGCAGTTAAGAAGAGAGCGAGCTGGTTCAAATGCAGGAGGAAGAATCCTTCATTCATGGTGACGATGAGGCCATCCTACATTCAAACAGGGAATTATCTGGTAAGAACAAAATAGTGAAATAGAATGACGATGAATTGAAAGGCAGCGATTTAGGAATAATTTTGATGAATTTAATACAGAGCTTGCCGAGGAAATTTGGAGAGAGATACATAAAGGAATCGATGGATATGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGTTGAGGATAATGAGTTGAAGGAAGGCGATATTTGTGTGTTTGAATTGATGAACAAAAACGCTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCTCAATGCCGAAGAATAA

mRNA sequence

ATGGCTTCTTCCTCCCGTCACCGGCGAAACGACGTCGTTAAACGACCCCGTAAAGCGTCAGACAATCCGCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCGAGGAACAAAAACACTTGCAAGCAAAAGAAATTCCAAAAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTAAAGGTGGCCGATGGCAAAGAGTGGAATGTGAGATTGACAAAAAGTAATAATGGAAAAGGAGTGTGGTTTCATAATGGTTGGCAAAACTTTGTAGAGTTTTATTCTGTTAAATTGGGTTACTTTCTTGTGTTCAAATATCAAAACCAATCTTCCAGTTTCTATGTCCTCATCTTTGATCTTACTGCCATGGAAATCGAAAAACCGATGAACAGCGGGCAGAAGCCGCCATCGACAGGGAGCCAGCGAGCAAGGGCAATGGAAAATGCTACCGCTTTTCAATCCACCACTTTGAATCCTTCTTTCGTCTCCAAGATTTGGCCTTCACACATTCATCTCGGAAAATTTCTTGACACAATGTCGTCGCAACGTTTTGCTGATGACCTTCTTGACAACAATCTTGACTTCGAGCTTCCAAACAAATTCGTCAAGAACAATGGCGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGACGGCGCCATCTGGAAGCTCCAATTCAAGAAATCGGACGCCAAAATCTGTTTCCTCAAAGGCTGGCCGGAATTCGTCCAGTTTTATTCTATCCAACCTGGACATTTACTTGTGTTCCAATTGAAATCAATTTGCTGTTTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGCACCAGCCGCCGGTTCTGATTCCGAAAAGTGAAAACGAAGATGAAGAGGAATCTGTTCGGATAGTGAATGAGGCGGTTTTGAAGAAGAGAAGAAGGGAGAACGACAAAGAAAGGGCGGCGTCTTGTTCCTTACGAGAGACGAAGAAGATGATGAGGAAGAATGCGAAGATGAATAAAAAGCATCGAGAATTAACTAGCGATGAAGATGAAGAAGATCTGGAAACGAATTACTCAAGGAGACAGAGTAATTACAGAGAATCAGAGGGCCGAGTCAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGATGCCGCAAGCTTTGACGGAGAATCAATTGGCAGTTAAGAAGAGAGCGAGCTGGTTCAAATGCAGGAGGAAGAATCCTTCATTCATGGTGACGATGAGGCCATCCTACATTCAAACAGGGAATTATCTGAGCTTGCCGAGGAAATTTGGAGAGAGATACATAAAGGAATCGATGGATATGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGTTGAGGATAATGAGTTGAAGGAAGGCGATATTTGTGTGTTTGAATTGATGAACAAAAACGCTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCTCAATGCCGAAGAATAA

Coding sequence (CDS)

ATGGCTTCTTCCTCCCGTCACCGGCGAAACGACGTCGTTAAACGACCCCGTAAAGCGTCAGACAATCCGCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCGAGGAACAAAAACACTTGCAAGCAAAAGAAATTCCAAAAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTAAAGGTGGCCGATGGCAAAGAGTGGAATGTGAGATTGACAAAAAGTAATAATGGAAAAGGAGTGTGGTTTCATAATGGTTGGCAAAACTTTGTAGAGTTTTATTCTGTTAAATTGGGTTACTTTCTTGTGTTCAAATATCAAAACCAATCTTCCAGTTTCTATGTCCTCATCTTTGATCTTACTGCCATGGAAATCGAAAAACCGATGAACAGCGGGCAGAAGCCGCCATCGACAGGGAGCCAGCGAGCAAGGGCAATGGAAAATGCTACCGCTTTTCAATCCACCACTTTGAATCCTTCTTTCGTCTCCAAGATTTGGCCTTCACACATTCATCTCGGAAAATTTCTTGACACAATGTCGTCGCAACGTTTTGCTGATGACCTTCTTGACAACAATCTTGACTTCGAGCTTCCAAACAAATTCGTCAAGAACAATGGCGATTCTCTGTTATACAACAAGGCCACTCTCTGCCTTCCCGACGGCGCCATCTGGAAGCTCCAATTCAAGAAATCGGACGCCAAAATCTGTTTCCTCAAAGGCTGGCCGGAATTCGTCCAGTTTTATTCTATCCAACCTGGACATTTACTTGTGTTCCAATTGAAATCAATTTGCTGTTTCAATGTCCTCATTTTCGATACCACCGCCACCGAAATCGATTATCCAATGCACCAGCCGCCGGTTCTGATTCCGAAAAGTGAAAACGAAGATGAAGAGGAATCTGTTCGGATAGTGAATGAGGCGGTTTTGAAGAAGAGAAGAAGGGAGAACGACAAAGAAAGGGCGGCGTCTTGTTCCTTACGAGAGACGAAGAAGATGATGAGGAAGAATGCGAAGATGAATAAAAAGCATCGAGAATTAACTAGCGATGAAGATGAAGAAGATCTGGAAACGAATTACTCAAGGAGACAGAGTAATTACAGAGAATCAGAGGGCCGAGTCAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGATGCCGCAAGCTTTGACGGAGAATCAATTGGCAGTTAAGAAGAGAGCGAGCTGGTTCAAATGCAGGAGGAAGAATCCTTCATTCATGGTGACGATGAGGCCATCCTACATTCAAACAGGGAATTATCTGAGCTTGCCGAGGAAATTTGGAGAGAGATACATAAAGGAATCGATGGATATGAAGCTGGAGGTGGGAGACGGGAGGAGTTGGAGAGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGTTGAGGATAATGAGTTGAAGGAAGGCGATATTTGTGTGTTTGAATTGATGAACAAAAACGCTGTTTGCTTCAAAGTCGCCATTTTCCGTCTTCTCAATGCCGAAGAATAA

Protein sequence

MASSSRHRRNDVVKRPRKASDNPHFFKVVLADALEEQKHLQAKEIPKKFVREYGVKALLNDQICLKVADGKEWNVRLTKSNNGKGVWFHNGWQNFVEFYSVKLGYFLVFKYQNQSSSFYVLIFDLTAMEIEKPMNSGQKPPSTGSQRARAMENATAFQSTTLNPSFVSKIWPSHIHLGKFLDTMSSQRFADDLLDNNLDFELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRENDKERAASCSLRETKKMMRKNAKMNKKHRELTSDEDEEDLETNYSRRQSNYRESEGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVCFKVAIFRLLNAEE

Homology

[Close]

BLAST of Clc02G13900 vs. NCBI nr
Match: XP_008457957.2 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 1.7e-133
Identity = 254/326 (77.91%), Postives = 278/326 (85.28%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           ELPNKFVKNNG S+L+NK TL LPDGA WK+Q KKSD KI F +GWPEFVQFYS+QPG+ 
Sbjct: 66  ELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSDGKIFFRRGWPEFVQFYSVQPGYF 125

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           LVFQLK ICCFNVLIFDT+ATEIDYP+     +IPKS NEDEEES++I+NE VLKKRR E
Sbjct: 126 LVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKSRNEDEEESIQILNEMVLKKRRME 185

Query: 321 NDKERAASCSLRETKKMMRKNAKMN-KKHRELTSDEDEEDLETNYSRRQSNYRES----- 380
            ++E  A  SLR  KKMMRKNAK+   K+R +TSDEDEEDLET+ SRRQSN+R +     
Sbjct: 186 KEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEEDLETDNSRRQSNHRGTAYNEG 245

Query: 381 -EGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYL 440
            +GRVSPESMRPMNPRK P ALTENQLAVKKRAS FK RR NPSFMVTMRPSYIQTGNYL
Sbjct: 246 DDGRVSPESMRPMNPRKTPPALTENQLAVKKRASRFKSRRNNPSFMVTMRPSYIQTGNYL 305

Query: 441 SLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEG 500
           SLPR+FGERYIKES+D+KLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF  DNELKEG
Sbjct: 306 SLPRRFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEG 365

Query: 501 DICVFELMNKN-AVCFKVAIFRLLNA 519
           DICVFELM KN AV FKVAIFRL NA
Sbjct: 366 DICVFELMEKNDAVLFKVAIFRLPNA 391

[Close]

BLAST of Clc02G13900 vs. NCBI nr
Match: KAA0045854.1 (B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa] >TYK13734.1 B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 487.3 bits (1253), Expect = 1.7e-133
Identity = 254/326 (77.91%), Postives = 278/326 (85.28%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           ELPNKFVKNNG S+L+NK TL LPDGA WK+Q KKSD KI F +GWPEFVQFYS+QPG+ 
Sbjct: 27  ELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSDGKIFFRRGWPEFVQFYSVQPGYF 86

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           LVFQLK ICCFNVLIFDT+ATEIDYP+     +IPKS NEDEEES++I+NE VLKKRR E
Sbjct: 87  LVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKSRNEDEEESIQILNEMVLKKRRME 146

Query: 321 NDKERAASCSLRETKKMMRKNAKMN-KKHRELTSDEDEEDLETNYSRRQSNYRES----- 380
            ++E  A  SLR  KKMMRKNAK+   K+R +TSDEDEEDLET+ SRRQSN+R +     
Sbjct: 147 KEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEEDLETDNSRRQSNHRGTAYNEG 206

Query: 381 -EGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYL 440
            +GRVSPESMRPMNPRK P ALTENQLAVKKRAS FK RR NPSFMVTMRPSYIQTGNYL
Sbjct: 207 DDGRVSPESMRPMNPRKTPPALTENQLAVKKRASRFKSRRNNPSFMVTMRPSYIQTGNYL 266

Query: 441 SLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEG 500
           SLPR+FGERYIKES+D+KLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF  DNELKEG
Sbjct: 267 SLPRRFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEG 326

Query: 501 DICVFELMNKN-AVCFKVAIFRLLNA 519
           DICVFELM KN AV FKVAIFRL NA
Sbjct: 327 DICVFELMEKNDAVLFKVAIFRLPNA 352

[Close]

BLAST of Clc02G13900 vs. NCBI nr
Match: XP_031736562.1 (B3 domain-containing transcription factor VRN1-like [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-132
Identity = 252/328 (76.83%), Postives = 277/328 (84.45%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           +LPNKFVKNNG SLL+NK TL LPDGA WK+Q KK D KICF +GWPEFVQFYS+QPGH 
Sbjct: 27  DLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKICFRRGWPEFVQFYSVQPGHF 86

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           LVFQLK ICCFNVLIFDT+ATEIDYP+ +   LIPKS NEDEEES++I+NE VLKKRR E
Sbjct: 87  LVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKSRNEDEEESIQILNEMVLKKRRME 146

Query: 321 NDKER-AASCSLRETKKMMRKNAKMN-KKHRELTSDEDEEDLETNYSRRQSNYR------ 380
            ++E   A  SLR  KKMMRKNAK+   K+R +TSDEDE DLE + SRRQSN+R      
Sbjct: 147 KEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEGDLEMDNSRRQSNHRGIVYNE 206

Query: 381 ESEGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNY 440
             +GRVSPESMRPMNPRK P ALTENQLAVKKRASWFK RR NPSFMVTMRPSYIQTGNY
Sbjct: 207 GDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRNNPSFMVTMRPSYIQTGNY 266

Query: 441 LSLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKE 500
           LSLPR+FGE+YIKES+D+KLEVGDGR WRVWCGVRWAFTRRRTELKGGWKRF  DNELKE
Sbjct: 267 LSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKE 326

Query: 501 GDICVFELMNKN-AVCFKVAIFRLLNAE 520
           GDICVFELM KN +V FKVAIFRL +AE
Sbjct: 327 GDICVFELMKKNGSVLFKVAIFRLPDAE 354

[Close]

BLAST of Clc02G13900 vs. NCBI nr
Match: XP_038902137.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 457.6 bits (1176), Expect = 1.4e-124
Identity = 244/344 (70.93%), Postives = 271/344 (78.78%), Query Frame = 0


Query: 192 DLLDNNLDFELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQ 251
           +L+   LD  LPNKFVKNNG SLL++KATL LPDGA W +Q K  D KICFL+GWPEFV+
Sbjct: 19  NLIQQKLD--LPNKFVKNNGASLLFSKATLSLPDGANWTVQLKNLDGKICFLRGWPEFVE 78

Query: 252 FYSIQPGHLLVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNE 311
           FYSIQPG+ LVFQL+ ICCFNVLIFDT+ATEIDYP   P VLIPK+ENED EESVR +N 
Sbjct: 79  FYSIQPGYFLVFQLRRICCFNVLIFDTSATEIDYPTRPPSVLIPKTENEDGEESVRTLNG 138

Query: 312 AVLKKRRRENDKERAASCSLRETKKMMRKNAKMN-KKHRELTS-------DEDE-EDLET 371
           AVLKKR RE +++  A CS RE KKMMRKN K+  +KHR  T+       DEDE EDLET
Sbjct: 139 AVLKKRSREKEEKTVAYCSFREMKKMMRKNVKIKIEKHRGFTTSQGFSYEDEDEDEDLET 198

Query: 372 NYSRRQSNYRES------EGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNP 431
           NYSRRQS YR S      +GR SPE+MRPMNPRK P  LTENQL V +RA  FKCR  NP
Sbjct: 199 NYSRRQSTYRGSAYNEGDDGRFSPETMRPMNPRKTPPVLTENQLVVLRRARSFKCRTNNP 258

Query: 432 SFMVTMRPSYIQTGNYLSLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTE 491
           SFMVTMRPSYIQTGNYLS+PR F ERYIKESMD+KLE+GDGRSWRV CGVRWAFTRRRTE
Sbjct: 259 SFMVTMRPSYIQTGNYLSIPRIFAERYIKESMDVKLEIGDGRSWRVLCGVRWAFTRRRTE 318

Query: 492 LKGGWKRFVEDNELKEGDICVFELMNKNA-VCFKVAIFRLLNAE 520
           LKGGWKRF  DNEL+EGDICVFEL+NK   V F V IFRL + E
Sbjct: 319 LKGGWKRFAVDNELEEGDICVFELINKTTKVHFHVTIFRLPSPE 360

[Close]

BLAST of Clc02G13900 vs. NCBI nr
Match: XP_008457851.1 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 4.2e-124
Identity = 248/365 (67.95%), Postives = 276/365 (75.62%), Query Frame = 0


Query: 177 LGKFLDTMSSQRFADDLLDNNL---DFELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQF 236
           +G F+    +  F   +L  NL     +LPNKFVKNNGDSLL+N   L LPDGA W  Q 
Sbjct: 1   MGSFIS--PNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQL 60

Query: 237 KKSDAKICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDTTATEIDYPMHQPPVL 296
            K D K CFL+GWPEFV+FYSIQPG+ LVFQLK ICCFNVLIFDT+ATEIDYPM +PPVL
Sbjct: 61  MKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVL 120

Query: 297 IPKSENEDEEESVRIVNEAVLKKRRR--ENDKERAASCSLRETKKMMRKNAKMNKKHREL 356
           IPKSE+EDEEES+ I++EA LKKR+R  + +KE +A CSLR+ KK M        KHRE 
Sbjct: 121 IPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKI---MKHREF 180

Query: 357 T-----SDEDE-----EDLETNYSRRQSNYRES------EGRVSPESMRPMNPRKMPQAL 416
           T     SDEDE     EDLETNYS RQ+NYR S      +GR SPESMRPMNPRK PQ L
Sbjct: 181 TTPQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVL 240

Query: 417 TENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKESMDMKLEVG 476
           TENQL V +RAS FKCR KNPSFMVTMRPSYIQTGN LSLPR F ERYIKESMD+KLEVG
Sbjct: 241 TENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVG 300

Query: 477 DGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKN-AVCFKVAIFR 520
           DGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFEL+NK   V F V IFR
Sbjct: 301 DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFR 360

[Close]

BLAST of Clc02G13900 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-20
Identity = 93/331 (28.10%), Postives = 152/331 (45.92%), Query Frame = 0


Query: 202 LPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHLL 261
           +P+KFV    D L    A L +PDG +W++  +K+D KI F  GW EFV  YSI+ G+LL
Sbjct: 22  VPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLL 81

Query: 262 VFQLKSICCFNVLIFDTTATEIDY-------PMHQPPVLIPKSENEDEEESVRIVNEAVL 321
           +F+ +    F+V IF+ + +EI+Y         H         E+ ++E++  I   +V 
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 141

Query: 322 KKRRREND---KERAASCSLRE------TKKMMRKNAKMNKKHRELTSDEDEEDLETNYS 381
                E+     +  AS +++         +      K+ KK      + D E++ ++  
Sbjct: 142 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAP 201

Query: 382 RRQSNYRESEGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPS 441
           R       S+   S  +      RK      E + A+    ++      NP F V +RPS
Sbjct: 202 RDDDPENRSKFYESASA------RKRTVTAEERERAINAAKTF---EPTNPFFRVVLRPS 261

Query: 442 YIQTGNYLSLPRKFGERYIKE-SMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF 501
           Y+  G  + LP  F E+Y+   S  +K+++ + + W V C     +   R +   GW  F
Sbjct: 262 YLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRC----LYKAGRAKFSQGWYEF 321

Query: 502 VEDNELKEGDICVFELMNKNAVCFKVAIFRL 516
             +N L EGD+CVFEL+       KV  FR+
Sbjct: 322 TLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

[Close]

BLAST of Clc02G13900 vs. ExPASy Swiss-Prot
Match: Q7XS75 (Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0346900 PE=3 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 6.0e-09
Identity = 86/348 (24.71%), Postives = 142/348 (40.80%), Query Frame = 0


Query: 178 GKFLDTMSSQRFADDLLDNNLD-FELPNKFVKN--NGDSLLYNKATLCLPDGAIWKLQFK 237
           G+  DT    +F   LL   +D   +P+KFV++   G++L  N A +  P G  W+++  
Sbjct: 132 GRATDTSRKPQFLTVLLPGIMDKMRIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELD 191

Query: 238 KSDAKICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLI 297
           K  + +    GW +F+ F+ I  G +++F+ +    F + +F     + D+         
Sbjct: 192 KDQSGVFLGGGWLQFLSFHGISRGDVVIFRYEGNLVFKISVFGPNGRQKDF--------- 251

Query: 298 PKSENEDEEESVRIVNEAVLKKRRRENDKERAASCSLRETKKMMRKNAKMNKKHRELTSD 357
                  + + + I         +   +++ A S S R          K N K +    +
Sbjct: 252 -------KAKGISIY--------QGTGEQQEAPSFSRR----------KCNNKKKSRFGE 311

Query: 358 EDEEDLETNYSRRQSNYRESEGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRK 417
           +D    E   SR+ S    ++GR S    + M  RK     T +   +  R SW K +  
Sbjct: 312 DDGNQQEMPCSRKGSG---NKGRTSDRETKRM--RK-----TRSVYEIGPR-SWIK-KEI 371

Query: 418 NPSFMVTMRPSYIQTGNYLSLPRKFGER--YIKES------MDMKLEVGD-------GRS 477
           N          Y+     LSL R F E    ++ES      +D     GD        RS
Sbjct: 372 N---------EYVLERCILSLARTFCESIGLVEESSITLMMIDTTSTQGDQGGSSSSSRS 416

Query: 478 WRVWCGVRWAFTRRRTE-----LKGGWKRFVEDNELKEGDICVFELMN 503
           W V        T RR +     L  GW+RF EDN ++ GD+CVF +++
Sbjct: 432 WEV--------TGRRYKDACYLLGAGWRRFCEDNGVRSGDVCVFTVLD 416

[Close]

BLAST of Clc02G13900 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.0e-08
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 202 LPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHLL 261
           +P +FVK  G S L    TL  P G    ++ K+   +I F +GW EF + +SI+ GH L
Sbjct: 46  IPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFL 105

Query: 262 VFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 321
           +F+ K    F V+IF+ +A E +YP+    + I   ++  E        E   KKR R+
Sbjct: 106 LFEYKKNSSFRVIIFNASACETNYPLDAVHI-IDSDDDVIEITGKEFDTEHKSKKRPRD 162

[Close]

BLAST of Clc02G13900 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.7e-08
Identity = 52/184 (28.26%), Postives = 83/184 (45.11%), Query Frame = 0


Query: 333 ETKKMMRKNAKMNKKHRELTSDEDEEDLETNYSRRQSNYRESEGRVSPESMRPMNPRKMP 392
           ET K+++K  +  KK      + +      + S  +S + ES            + RK  
Sbjct: 60  ETPKVLKKRGR--KKKNPNPEEVNSSTPGGDDSENRSKFYES-----------ASARKRT 119

Query: 393 QALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKE-SMDMK 452
               E + AV    ++      NP F V +RPSY+  G  + LP  F E+Y+   S  +K
Sbjct: 120 VTAEERERAVNAAKTF---EPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIK 179

Query: 453 LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVCFKVA 512
           L++G+ + W V C     +   R +   GW  F  +N + EGD+CVFEL+       +V 
Sbjct: 180 LQLGE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVT 222

Query: 513 IFRL 516
            FR+
Sbjct: 240 AFRV 222

[Close]

BLAST of Clc02G13900 vs. ExPASy Swiss-Prot
Match: Q2R9D2 (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.7e-08
Identity = 77/331 (23.26%), Postives = 138/331 (41.69%), Query Frame = 0


Query: 226 GAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDTTATE--I 285
           G  W  +         F+ GW EFV+  SIQ G  LVF       F+V +F+ +  +   
Sbjct: 70  GNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKIS 129

Query: 286 DYPMHQPPVLIPKSENEDEEESVRIV-----------NEAVLKKRRRENDK--------- 345
            +  H    +I K+E+++       +           N  +  KR R+ D          
Sbjct: 130 TFSAHPSKNVIIKTESDEGGMVTAAITTEKMAPALKENNGITGKRTRDVDYLMEDRVVVF 189

Query: 346 ERAASCSLRETKKMMRKNAKMNK-----------KHRELTSDEDEEDLETN----YSRRQ 405
           ++++  ++ E+ +  R  A   K           +    +SDED    ++       R  
Sbjct: 190 KKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFL 249

Query: 406 SNYRESEGRVSPESMRPMNPRKMPQALTENQL-AVKKRASWFKCRRKNPSFMVTMRPSYI 465
           S      GR   +  R +      + +TE +     +RA  FK   KNP  +  M  SY+
Sbjct: 250 SGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFK--SKNPFAVQIMMESYV 309

Query: 466 QTGNYLSLPRKFGERYIKESMDMKLEVGD--GRSWRVWCGVRWAFTRRRTELKGGWKRFV 517
             G ++++P +F    +  + + ++ + D  G++W V     +   R      GGW +F 
Sbjct: 310 YVGFFMNIPCEFVRECLPHT-NKRITLWDPQGKAWEV--NYVYYSDRSVGSFSGGWGKFA 369

[Close]

BLAST of Clc02G13900 vs. ExPASy TrEMBL
Match: A0A5A7TS22 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002630 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 8.2e-134
Identity = 254/326 (77.91%), Postives = 278/326 (85.28%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           ELPNKFVKNNG S+L+NK TL LPDGA WK+Q KKSD KI F +GWPEFVQFYS+QPG+ 
Sbjct: 27  ELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSDGKIFFRRGWPEFVQFYSVQPGYF 86

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           LVFQLK ICCFNVLIFDT+ATEIDYP+     +IPKS NEDEEES++I+NE VLKKRR E
Sbjct: 87  LVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKSRNEDEEESIQILNEMVLKKRRME 146

Query: 321 NDKERAASCSLRETKKMMRKNAKMN-KKHRELTSDEDEEDLETNYSRRQSNYRES----- 380
            ++E  A  SLR  KKMMRKNAK+   K+R +TSDEDEEDLET+ SRRQSN+R +     
Sbjct: 147 KEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEEDLETDNSRRQSNHRGTAYNEG 206

Query: 381 -EGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYL 440
            +GRVSPESMRPMNPRK P ALTENQLAVKKRAS FK RR NPSFMVTMRPSYIQTGNYL
Sbjct: 207 DDGRVSPESMRPMNPRKTPPALTENQLAVKKRASRFKSRRNNPSFMVTMRPSYIQTGNYL 266

Query: 441 SLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEG 500
           SLPR+FGERYIKES+D+KLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF  DNELKEG
Sbjct: 267 SLPRRFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEG 326

Query: 501 DICVFELMNKN-AVCFKVAIFRLLNA 519
           DICVFELM KN AV FKVAIFRL NA
Sbjct: 327 DICVFELMEKNDAVLFKVAIFRLPNA 352

[Close]

BLAST of Clc02G13900 vs. ExPASy TrEMBL
Match: A0A1S3C6V0 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497522 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 8.2e-134
Identity = 254/326 (77.91%), Postives = 278/326 (85.28%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           ELPNKFVKNNG S+L+NK TL LPDGA WK+Q KKSD KI F +GWPEFVQFYS+QPG+ 
Sbjct: 66  ELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSDGKIFFRRGWPEFVQFYSVQPGYF 125

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           LVFQLK ICCFNVLIFDT+ATEIDYP+     +IPKS NEDEEES++I+NE VLKKRR E
Sbjct: 126 LVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKSRNEDEEESIQILNEMVLKKRRME 185

Query: 321 NDKERAASCSLRETKKMMRKNAKMN-KKHRELTSDEDEEDLETNYSRRQSNYRES----- 380
            ++E  A  SLR  KKMMRKNAK+   K+R +TSDEDEEDLET+ SRRQSN+R +     
Sbjct: 186 KEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEEDLETDNSRRQSNHRGTAYNEG 245

Query: 381 -EGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYL 440
            +GRVSPESMRPMNPRK P ALTENQLAVKKRAS FK RR NPSFMVTMRPSYIQTGNYL
Sbjct: 246 DDGRVSPESMRPMNPRKTPPALTENQLAVKKRASRFKSRRNNPSFMVTMRPSYIQTGNYL 305

Query: 441 SLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEG 500
           SLPR+FGERYIKES+D+KLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF  DNELKEG
Sbjct: 306 SLPRRFGERYIKESVDVKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKEG 365

Query: 501 DICVFELMNKN-AVCFKVAIFRLLNA 519
           DICVFELM KN AV FKVAIFRL NA
Sbjct: 366 DICVFELMEKNDAVLFKVAIFRLPNA 391

[Close]

BLAST of Clc02G13900 vs. ExPASy TrEMBL
Match: A0A0A0LMR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292230 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 6.9e-133
Identity = 252/328 (76.83%), Postives = 277/328 (84.45%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           +LPNKFVKNNG SLL+NK TL LPDGA WK+Q KK D KICF +GWPEFVQFYS+QPGH 
Sbjct: 27  DLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLDGKICFRRGWPEFVQFYSVQPGHF 86

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           LVFQLK ICCFNVLIFDT+ATEIDYP+ +   LIPKS NEDEEES++I+NE VLKKRR E
Sbjct: 87  LVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKSRNEDEEESIQILNEMVLKKRRME 146

Query: 321 NDKER-AASCSLRETKKMMRKNAKMN-KKHRELTSDEDEEDLETNYSRRQSNYR------ 380
            ++E   A  SLR  KKMMRKNAK+   K+R +TSDEDE DLE + SRRQSN+R      
Sbjct: 147 KEEETPPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEGDLEMDNSRRQSNHRGIVYNE 206

Query: 381 ESEGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNY 440
             +GRVSPESMRPMNPRK P ALTENQLAVKKRASWFK RR NPSFMVTMRPSYIQTGNY
Sbjct: 207 GDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASWFKSRRNNPSFMVTMRPSYIQTGNY 266

Query: 441 LSLPRKFGERYIKESMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKE 500
           LSLPR+FGE+YIKES+D+KLEVGDGR WRVWCGVRWAFTRRRTELKGGWKRF  DNELKE
Sbjct: 267 LSLPRRFGEKYIKESVDVKLEVGDGRCWRVWCGVRWAFTRRRTELKGGWKRFAVDNELKE 326

Query: 501 GDICVFELMNKN-AVCFKVAIFRLLNAE 520
           GDICVFELM KN +V FKVAIFRL +AE
Sbjct: 327 GDICVFELMKKNGSVLFKVAIFRLPDAE 354

[Close]

BLAST of Clc02G13900 vs. ExPASy TrEMBL
Match: A0A1S3C614 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497436 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 248/365 (67.95%), Postives = 276/365 (75.62%), Query Frame = 0


Query: 177 LGKFLDTMSSQRFADDLLDNNL---DFELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQF 236
           +G F+    +  F   +L  NL     +LPNKFVKNNGDSLL+N   L LPDGA W  Q 
Sbjct: 1   MGSFIS--PNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQL 60

Query: 237 KKSDAKICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDTTATEIDYPMHQPPVL 296
            K D K CFL+GWPEFV+FYSIQPG+ LVFQLK ICCFNVLIFDT+ATEIDYPM +PPVL
Sbjct: 61  MKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVL 120

Query: 297 IPKSENEDEEESVRIVNEAVLKKRRR--ENDKERAASCSLRETKKMMRKNAKMNKKHREL 356
           IPKSE+EDEEES+ I++EA LKKR+R  + +KE +A CSLR+ KK M        KHRE 
Sbjct: 121 IPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKI---MKHREF 180

Query: 357 T-----SDEDE-----EDLETNYSRRQSNYRES------EGRVSPESMRPMNPRKMPQAL 416
           T     SDEDE     EDLETNYS RQ+NYR S      +GR SPESMRPMNPRK PQ L
Sbjct: 181 TTPQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVL 240

Query: 417 TENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKESMDMKLEVG 476
           TENQL V +RAS FKCR KNPSFMVTMRPSYIQTGN LSLPR F ERYIKESMD+KLEVG
Sbjct: 241 TENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVG 300

Query: 477 DGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKN-AVCFKVAIFR 520
           DGR W+VWCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFEL+NK   V F V IFR
Sbjct: 301 DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFR 360

[Close]

BLAST of Clc02G13900 vs. ExPASy TrEMBL
Match: A0A0A0LM04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287160 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 3.7e-118
Identity = 235/354 (66.38%), Postives = 271/354 (76.55%), Query Frame = 0


Query: 181 LDTMSSQRFADDLLDNNL---DFELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSD 240
           L T  +  F   +L  NL     +LPNKFVKNN  SLL+N ATL LPDG+ W  Q  + D
Sbjct: 3   LFTSPNPHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLD 62

Query: 241 AKICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKS 300
            KICFL+GWPEFV FY++QPG+ LVFQLK ICCFNVLIFDT+ATEIDYPM + PV++PKS
Sbjct: 63  GKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKS 122

Query: 301 ENEDEEESVRIVNEAVLKKRRR--ENDKERAASCSLRETKKMMRKNAKMN-KKHRELTS- 360
           E++DE ES++I++E VLKKRRR  + +KE +A  SLRE    M+KN K+   K RE T+ 
Sbjct: 123 ESDDEGESIQILHEEVLKKRRRMEKKEKETSAYYSLRE----MKKNMKIKIMKRREFTTP 182

Query: 361 -----DEDEEDLETNYSRRQSNYRESE------GRVSPESMRPMNPRKMPQALTENQLAV 420
                D+++EDLET+YS RQ+NYR SE      GR SPESMRPMNPRK  Q LTENQL V
Sbjct: 183 QGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV 242

Query: 421 KKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKESMDMKLEVGDGRSWRV 480
            +RAS FKCR KNPSFMVTMRPSYIQTGN LSLPR F ERYIKES+D+KLEVGDGR W+V
Sbjct: 243 VRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKV 302

Query: 481 WCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKN-AVCFKVAIFRL 516
           WCGVRWAFTRRRTELKGGWKRF  DNEL+EGDICVFELMNK   V F V IFRL
Sbjct: 303 WCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRL 352

[Close]

BLAST of Clc02G13900 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 102.8 bits (255), Expect = 8.3e-22
Identity = 93/331 (28.10%), Postives = 152/331 (45.92%), Query Frame = 0


Query: 202 LPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHLL 261
           +P+KFV    D L    A L +PDG +W++  +K+D KI F  GW EFV  YSI+ G+LL
Sbjct: 22  VPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLL 81

Query: 262 VFQLKSICCFNVLIFDTTATEIDY-------PMHQPPVLIPKSENEDEEESVRIVNEAVL 321
           +F+ +    F+V IF+ + +EI+Y         H         E+ ++E++  I   +V 
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 141

Query: 322 KKRRREND---KERAASCSLRE------TKKMMRKNAKMNKKHRELTSDEDEEDLETNYS 381
                E+     +  AS +++         +      K+ KK      + D E++ ++  
Sbjct: 142 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAP 201

Query: 382 RRQSNYRESEGRVSPESMRPMNPRKMPQALTENQLAVKKRASWFKCRRKNPSFMVTMRPS 441
           R       S+   S  +      RK      E + A+    ++      NP F V +RPS
Sbjct: 202 RDDDPENRSKFYESASA------RKRTVTAEERERAINAAKTF---EPTNPFFRVVLRPS 261

Query: 442 YIQTGNYLSLPRKFGERYIKE-SMDMKLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRF 501
           Y+  G  + LP  F E+Y+   S  +K+++ + + W V C     +   R +   GW  F
Sbjct: 262 YLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRC----LYKAGRAKFSQGWYEF 321

Query: 502 VEDNELKEGDICVFELMNKNAVCFKVAIFRL 516
             +N L EGD+CVFEL+       KV  FR+
Sbjct: 322 TLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337

[Close]

BLAST of Clc02G13900 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-09
Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 202 LPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHLL 261
           +P +FVK  G S L    TL  P G    ++ K+   +I F +GW EF + +SI+ GH L
Sbjct: 46  IPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFL 105

Query: 262 VFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 321
           +F+ K    F V+IF+ +A E +YP+    + I   ++  E        E   KKR R+
Sbjct: 106 LFEYKKNSSFRVIIFNASACETNYPLDAVHI-IDSDDDVIEITGKEFDTEHKSKKRPRD 162

[Close]

BLAST of Clc02G13900 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-09
Identity = 52/184 (28.26%), Postives = 83/184 (45.11%), Query Frame = 0


Query: 333 ETKKMMRKNAKMNKKHRELTSDEDEEDLETNYSRRQSNYRESEGRVSPESMRPMNPRKMP 392
           ET K+++K  +  KK      + +      + S  +S + ES            + RK  
Sbjct: 60  ETPKVLKKRGR--KKKNPNPEEVNSSTPGGDDSENRSKFYES-----------ASARKRT 119

Query: 393 QALTENQLAVKKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKE-SMDMK 452
               E + AV    ++      NP F V +RPSY+  G  + LP  F E+Y+   S  +K
Sbjct: 120 VTAEERERAVNAAKTF---EPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIK 179

Query: 453 LEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNAVCFKVA 512
           L++G+ + W V C     +   R +   GW  F  +N + EGD+CVFEL+       +V 
Sbjct: 180 LQLGE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVT 222

Query: 513 IFRL 516
            FR+
Sbjct: 240 AFRV 222

[Close]

BLAST of Clc02G13900 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 57.0 bits (136), Expect = 5.2e-08
Identity = 42/145 (28.97%), Postives = 67/145 (46.21%), Query Frame = 0


Query: 201 ELPNKFVKNNGDSLLYNKATLCLPDGAIWKLQFKKSDAKICFLKGWPEFVQFYSIQPGHL 260
           ++P +FV+      L +  TL  P G    ++ K+   ++ F KGW EF + +S+  GH 
Sbjct: 49  KVPARFVRFG--PKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHF 108

Query: 261 LVFQLKSICCFNVLIFDTTATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRE 320
           L F  +   CF V+IFD +A+EI+YP+          + +D  E V   +E         
Sbjct: 109 LFFHYEGDSCFRVVIFDVSASEIEYPL---------DDTDDNREEVMDDDEQGFTGFESS 168

Query: 321 NDKERAASCS--LRETKKMMRKNAK 344
           +D          L++ KK  R N K
Sbjct: 169 DDDGEVVDMDELLKKKKKKPRVNIK 182

[Close]

BLAST of Clc02G13900 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-07
Identity = 72/306 (23.53%), Postives = 120/306 (39.22%), Query Frame = 0


Query: 220 TLCLPDGAIWKLQFKKSDAK-ICFLKGWPEFVQFYSIQPGHLLVFQLKSICCFNVLIFDT 279
           TL  P G  + +  ++ D K + F  GW +FV+ +S++   LLVF+   +  F VL+FD 
Sbjct: 56  TLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFD- 115

Query: 280 TATEIDYPMHQPPVLIPKSENEDEEESVRIVNEAVLKKRRRENDKERAASCSLRETKKMM 339
                              +   E+ +   V +                 C   E  K  
Sbjct: 116 ------------------GQTLCEKPTSYFVRK-----------------CGHAEKTKAS 175

Query: 340 RKNAKMNKKHRELTSDEDEEDLETNYSRRQSNYRESEGRVSPESMRPMNPRKMPQALTEN 399
                  ++   + SD D    +       S  R SEG+      + M  R++     + 
Sbjct: 176 HTG---YEQEEHINSDIDTASAQLPVISPTSTVRVSEGKYPLSGFKKMR-RELSNDNLDQ 235

Query: 400 QLAV--------KKRASWFKCRRKNPSFMVTMRPSYIQTGNYLSLPRKFGERYIKESMDM 459
           +  V        KK  S  K       F+V M+ S++ +  +L++P K+  + +  +   
Sbjct: 236 KADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQE 295

Query: 460 KLEVGDGRSWRVWCGVRWAFTRRRTELKGGWKRFVEDNELKEGDICVFELMNKNA--VCF 515
            +   D   W +   +  A  R    +  GWK+FV+DN L+EGD+CVFE  N     +  
Sbjct: 296 VVMQVDQTKWEMKFNIFGA--RGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHL 319

The following BLAST results are available for this feature:

BLAST of Clc02G13900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457957.2	1.7e-133	77.91	PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]	[more]
KAA0045854.1	1.7e-133	77.91	B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa] >...	[more]
XP_031736562.1	1.4e-132	76.83	B3 domain-containing transcription factor VRN1-like [Cucumis sativus]	[more]
XP_038902137.1	1.4e-124	70.93	B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispid...	[more]
XP_008457851.1	4.2e-124	67.95	PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]	[more]

BLAST of Clc02G13900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	1.2e-20	28.10	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q7XS75	6.0e-09	24.71	Putative B3 domain-containing protein Os04g0346900 OS=Oryza sativa subsp. japoni...	[more]
Q9ZSH7	3.0e-08	33.61	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q9XIB5	6.7e-08	28.26	B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1...	[more]
Q2R9D2	8.7e-08	23.26	B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Clc02G13900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TS22	8.2e-134	77.91	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C6V0	8.2e-134	77.91	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LMR6	6.9e-133	76.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292230 PE=4 SV=1	[more]
A0A1S3C614	2.0e-124	67.95	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LM04	3.7e-118	66.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287160 PE=4 SV=1	[more]

BLAST of Clc02G13900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	8.3e-22	28.10	AP2/B3-like transcriptional factor family protein	[more]
AT4G01580.1	2.1e-09	33.61	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	4.7e-09	28.26	related to vernalization1 1	[more]
AT1G49475.1	5.2e-08	28.97	AP2/B3-like transcriptional factor family protein	[more]
AT4G33280.1	1.2e-07	23.53	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 25..126 e-value: 1.1E-10 score: 51.4 coord: 418..519 e-value: 1.9E-13 score: 60.7 coord: 189..279 e-value: 2.2E-6 score: 37.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 200..277 e-value: 3.8E-8 score: 33.1 coord: 43..124 e-value: 9.1E-15 score: 54.4 coord: 418..514 e-value: 7.2E-20 score: 70.7
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 45..126 score: 12.336641
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 418..516 score: 14.451866
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 185..279 score: 10.559853
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 23..124 e-value: 5.06621E-22 score: 88.5388
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 416..514 e-value: 1.48197E-24 score: 95.8576
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 202..277 e-value: 2.58307E-11 score: 58.1081
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 396..517 e-value: 1.6E-31 score: 110.6
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 17..127 e-value: 8.7E-23 score: 82.2 coord: 163..280 e-value: 3.3E-16 score: 61.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 413..514
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 200..286
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 20..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..379
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 195..514 coord: 17..137
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 195..514 coord: 17..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G13900.2	Clc02G13900.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding