Clc02G09740 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCATCAACAACACTTGTTGTACTCACCTCACGAAATTCCTTTTTTATTTTCCTCCAAAGTACTAAAAAAACAATGAAGTCGAAAGCTGTTGTGTTTGCATGGCTGCTGTTGTTAGTCTTAGCTGTCGTTGCTTTTGCCGAAGAAAATCAAGAGCAGCCTGAGAAAGCTAAAGGTATATGGTGCTGTAATTGTAATTTGTATCAATATTCGACACCTATACATTGAGTCACTATGACAAATTAAAACAAAGTGTTCATGAAGGATACTGAATTCTCACATTCATTTTTCATTTCTAATACCATTTTTTTAAATTTATTTATGGTTGAAATGTAAGTTTTGTTTTTTTTTTTTTAATCAATTTTCTTACCTACGACAGTTTAAAAGACTTTTGAAATTTTATAAACAAAAACAAACACATATAGCTATCAATAATTTCCCTTTTATCTGGTCAATAGTGATTAAGATGATATATCAGCAAGTGGTTCGAGAAATTTTGTATTCAAATTCTTCTAATGTTATTGTTTATTGATTCTTCATATTTCAAGTCTCTCAAGCCTACATGGAAAAAGAGTAAGGAATTTGCCTTTTATCTTGTCAATAGTGATTAAGATGATATATCAGCAAGTGGTTCCAGAAATTTTGTGTTTAAATTCTTCTAATGTTATTGTTCAATTGATTTTTCATATTTCAAGAGTCTCAAGCCTACATGGAAAAAGAGTGCAAGGAAAAGTGAATGTTGGATGATATAAAGTTGAAAACTGAATGTATTAAATTTATCTTCATTCATCCATTTAAATTTTTTGATTGGTTTATGAATACGTCTGAAGATGTTTGTTTAGAAGAATAATTATTGGGCATGTACGCATGCATATGTATATAAATTTTTTTCTTTGGATGAATTGGGTGATGAAGGCACAGGTGAAAAAGAAAAAGGAGTAGAAGAGTCAAAGCTACACTGCTACCATGGATGCTGCAAATATTATGGGCATAACTGCGTGAGATGCTGCAGAAGTCTTGCAGAAGCACAGGCCAATGCCCACAATAATAATAACAAAAATAATGATGATGATGATAATAATAATAATAATGAGGAGGAGGATGCTGGACAAGAGGAGAATGAAGTGGAAGCAGCCGCACATAGATGGGGTGGCTGGGGTGGACACAGAGGCGGAGGTGGATGGGGAGGCGGGAGAGGTGGATGGGGAGGCGGCAGAGGTGGATGGGGTGGAGGTGGGAAGTGAGTACTGGAAGAAAAAAGAGCTGTAATAATGTGTGTGTGTTAAGTTACGTATTATGTAGGGTGCCCTCTACTGAAGGTAATGTTGAAGAAGGGTAGAATAAAGGTAGAAGGAAGGAAAATTATAAAATAATAATGAATTAGCTAGGGGGCATAGTGAACTAGAATAGAAGGGTTAGATCCCTTCACCAATATTGTACTTTAGCGCCAATCACTCCATATGTGAAATATACAAATATATATGTGCTTTAATATTATGTTACGCCCAGTATTATCTCTCTC AAATCATCAACAACACTTGTTGTACTCACCTCACGAAATTCCTTTTTTATTTTCCTCCAAAGTACTAAAAAAACAATGAAGTCGAAAGCTGTTGTGTTTGCATGGCTGCTGTTGTTAGTCTTAGCTGTCGTTGCTTTTGCCGAAGAAAATCAAGAGCAGCCTGAGAAAGCTAAAGGCACAGGTGAAAAAGAAAAAGGAGTAGAAGAGTCAAAGCTACACTGCTACCATGGATGCTGCAAATATTATGGGCATAACTGCGTGAGATGCTGCAGAAGTCTTGCAGAAGCACAGGCCAATGCCCACAATAATAATAACAAAAATAATGATGATGATGATAATAATAATAATAATGAGGAGGAGGATGCTGGACAAGAGGAGAATGAAGTGGAAGCAGCCGCACATAGATGGGGTGGCTGGGGTGGACACAGAGGCGGAGGTGGATGGGGAGGCGGGAGAGGTGGATGGGGAGGCGGCAGAGGTGGATGGGGTGGAGGTGGGAAGTGAGTACTGGAAGAAAAAAGAGCTGTAATAATGTGTGTGTGTTAAGTTACGTATTATGTAGGGTGCCCTCTACTGAAGGTAATGTTGAAGAAGGGTAGAATAAAGGTAGAAGGAAGGAAAATTATAAAATAATAATGAATTAGCTAGGGGGCATAGTGAACTAGAATAGAAGGGTTAGATCCCTTCACCAATATTGTACTTTAGCGCCAATCACTCCATATGTGAAATATACAAATATATATGTGCTTTAATATTATGTTACGCCCAGTATTATCTCTCTC ATGAAGTCGAAAGCTGTTGTGTTTGCATGGCTGCTGTTGTTAGTCTTAGCTGTCGTTGCTTTTGCCGAAGAAAATCAAGAGCAGCCTGAGAAAGCTAAAGGCACAGGTGAAAAAGAAAAAGGAGTAGAAGAGTCAAAGCTACACTGCTACCATGGATGCTGCAAATATTATGGGCATAACTGCGTGAGATGCTGCAGAAGTCTTGCAGAAGCACAGGCCAATGCCCACAATAATAATAACAAAAATAATGATGATGATGATAATAATAATAATAATGAGGAGGAGGATGCTGGACAAGAGGAGAATGAAGTGGAAGCAGCCGCACATAGATGGGGTGGCTGGGGTGGACACAGAGGCGGAGGTGGATGGGGAGGCGGGAGAGGTGGATGGGGAGGCGGCAGAGGTGGATGGGGTGGAGGTGGGAAGTGA MKSKAVVFAWLLLLVLAVVAFAEENQEQPEKAKGTGEKEKGVEESKLHCYHGCCKYYGHNCVRCCRSLAEAQANAHNNNNKNNDDDDNNNNNEEEDAGQEENEVEAAAHRWGGWGGHRGGGGWGGGRGGWGGGRGGWGGGGK Homology
BLAST of Clc02G09740 vs. NCBI nr
Match: XP_031737253.1 (glycine-rich cell wall structural protein-like isoform X1 [Cucumis sativus] >KAE8652268.1 hypothetical protein Csa_021972 [Cucumis sativus]) HSP 1 Score: 118.2 bits (295), Expect = 5.6e-23 Identity = 88/143 (61.54%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of Clc02G09740 vs. NCBI nr
Match: KAA0053261.1 (BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 5.6e-23 Identity = 92/146 (63.01%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of Clc02G09740 vs. NCBI nr
Match: XP_031737254.1 (late embryogenesis abundant protein M17-like isoform X2 [Cucumis sativus]) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22 Identity = 87/142 (61.27%), Postives = 94/142 (66.20%), Query Frame = 0
BLAST of Clc02G09740 vs. NCBI nr
Match: XP_016901862.1 (PREDICTED: CYC02 protein-like isoform X1 [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 4.8e-22 Identity = 93/155 (60.00%), Postives = 99/155 (63.87%), Query Frame = 0
BLAST of Clc02G09740 vs. NCBI nr
Match: XP_008455979.1 (PREDICTED: BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo] >TYK02908.1 BPTI/Kunitz domain-containing protein 2-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 115.2 bits (287), Expect = 4.8e-22 Identity = 92/154 (59.74%), Postives = 99/154 (64.29%), Query Frame = 0
BLAST of Clc02G09740 vs. ExPASy Swiss-Prot
Match: P25923 (CYC02 protein OS=Catharanthus roseus OX=4058 GN=CYC02 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.6e-04 Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Clc02G09740 vs. ExPASy TrEMBL
Match: A0A5A7UI77 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00550 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.7e-23 Identity = 92/146 (63.01%), Postives = 99/146 (67.81%), Query Frame = 0
BLAST of Clc02G09740 vs. ExPASy TrEMBL
Match: A0A5D3BV93 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold755G00080 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22 Identity = 92/154 (59.74%), Postives = 99/154 (64.29%), Query Frame = 0
BLAST of Clc02G09740 vs. ExPASy TrEMBL
Match: A0A1S4E0U4 (CYC02 protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22 Identity = 93/155 (60.00%), Postives = 99/155 (63.87%), Query Frame = 0
BLAST of Clc02G09740 vs. ExPASy TrEMBL
Match: A0A1S3C295 (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22 Identity = 92/154 (59.74%), Postives = 99/154 (64.29%), Query Frame = 0
BLAST of Clc02G09740 vs. ExPASy TrEMBL
Match: A0A6J1JB01 (CYC02 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484148 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 6.3e-20 Identity = 78/139 (56.12%), Postives = 90/139 (64.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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