Clc02G09720 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTTTTTCTCATTTTGGTTTCTTTTTCCGTAGAGAATGAAGTCTAAAGGTTTTCTTTTTGTGTGTCTTCTTCTTGCGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACACAGCATACCCAAGAAGAGGAACAAGGTATATTCTAACTTTTTAATCATACACTACGCATGACTGTAGGGACAATGGATTAGCTGTACCTAATCCATGTAGTCTTTTCCTATACCTAGTATGAAAAAAATAAAATATATATATATATATATATATTATTATTTATAACAAAGATTAATAATTAGAGCAATACAAATAATACAAATAATAAATCAAAAATATTTTAAAAAATAAGAATTGTATACATAATGGTAAATTATGAATGAACAAAATAGATCCATGCTCAGGATGCTTTCATGTTGCTTACATTGTTTATATTGTATGTTTTATGAATTTTTGTTAGGATACAATAGAAATATTTGTTTCAATAGTAATCATTACTTTTTCTATGTCCTCTTTATCCTATTTGATATTTTTCGCTTCCAGTGAATCTAGGCCATGATGTAGAAGAGTCTAAACATAGAGACAGCGGTGGTGGCAGCTATGGAGGATCTGGCGGAGGGTCTAGTGGAGGAGGGTCTGGCGGCAGTGGATCAGGGGGAGGTGGCTACGGCGGCGGTGGTGGCCATGGCGGAGGTGGGACTGGTAGTGGCGGCCAAGGCGGTGGAGGATCTGGCGGAGGCGGTCACGGAGGTGGCGGAGGGGGTCACGGCGGTGGAGGGTCTGGCGGAGGTGGCGGCTATGGAGGAGGAGGGAAAGGAGGAGGCGGGAAAGGCGGAGGAGGTAGTGGGTCGGGAGGAGGTGGTAAAGGCGGAGGAGGTGGGAAAGGCGGTGGAGGAAGTGGGTCAGGAGGAGGTGGGAAAGGCGGTGGAGGAGGTGGATATGGAGGAGGAGGAAGTGGGTCAGGTGGAGGCGGTAAAGGCGGAGGAGGAGGAGGAGGAGGGTACGAAGATAGCGAGTTCTCAAGAGGAGGCGGCGGAGGCTGGAAGGGAGGTGGCAGAGGAGGCGGTTGGAGAGGCGGTGGAGGAAGAGGAGGTGGCGGAAAGTGAAACCAATCTAATACATGACATAAATATCTAAAAAAGAAAAAGCAAGGAAGTATATATATGTTTAAATAACTACAAATATAAGGTGAATAATAATGAATGATGGTAGGGATAAGGACCTTAGAGAGGATACTGAATAATTCAGAAGCTCCCTTATTCCATAGGATCTTTTTACAAATGTAGGCCTGTACGGCGCAGTAGTGGCTAGTGCTGTATTTTGAACCTTATTACTATTATTATGTATACTACTAATGGTGATATAATATCAATATGTTGTTTAAACTTGAATCTCACTCTTTTCTCAAGAAGAATCAATCCGAATCTCACCTAAAATAATACTAGGTGCTATCATTAGTACATTTTACTAAATTGTCCCATTATTATTTGTTATCTTATAACAATTTTTTCTGTAAGATTTAATTTCAGTTTTGGACAAAAATGTTTAATTTTGCTCCTTTAATACTTAAAAAATAGTCCCTTCTAATAAAGTATCTGAGGTGGCAAAAAAAAAAAAAAAAAAAAATTAATTCCTTTACTTTTCAATTACTTTCTCTCCCTGCCCTCCTCTCTTTCTTCTCCATCTCTATCGTCCCCCTCACATTCTCTCTACCTCTCTTACGTTTCAAGCTCATTCATATCTCCAATTTTAAGAACTCAAAATCATTGAACATGAAACAGTTCCGCTCCATTTCAAATACCCAATAACAGAAAGAAGGGAAAAAAGAAAAAAATAACAGAAAGAAAGGAAAAAAAGAAAAAAAGTACAGATTCTTCATTCTTTTCGTTCCTTTTTTCAGTTCTGGCTAGACACTCTGTTTCAATTAAACTCCAACATACCATGACAACGGCAGTAAGTAAACAAGAAAACGCAGAAGAAAACAAAATGATGATAATCATCTCAAGCAGCACAAAAACCAGTCTTTGTTAAAATGGCGTTTGGAACTTTATTTAAATCCCTTATTTTGATTTTGTTTGAGAGAAAAAAAAAAAAAAAGGAATTTTCTTCGAGAGTTCTTCCAACCCTTTCACAAACGGAGAAAGACGAAACTTAGCTTCTCGCCAATTTCTGAGCAATCCATCGAGTCGGAGGCACCATATCGTCTTCTTCACCATCAATGCCTTCTTGATCTCCATGTCGTCAGTTTTTTCACCGGAAAAGTCGCCGAACAAAGAACCCATCTTGCCGTCAATTTTGAGCCATCCGGGAATATCCACCAGAGCAGAGGATTGATTGATTATCCGTTATCTGGGTTCCGTGTGTTCTTGTCGAAATGGATTTTGGGATCATGTTTAAATTGGAGTTTCTAA GTTTTTTTTCTCATTTTGGTTTCTTTTTCCGTAGAGAATGAAGTCTAAAGGTTTTCTTTTTGTGTGTCTTCTTCTTGCGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACACAGCATACCCAAGAAGAGGAACAAGTGAATCTAGGCCATGATGTAGAAGAGTCTAAACATAGAGACAGCGGTGGTGGCAGCTATGGAGGATCTGGCGGAGGGTCTAGTGGAGGAGGGTCTGGCGGCAGTGGATCAGGGGGAGGTGGCTACGGCGGCGGTGGTGGCCATGGCGGAGGTGGGACTGGTAGTGGCGGCCAAGGCGGTGGAGGATCTGGCGGAGGCGGTCACGGAGGTGGCGGAGGGGGTCACGGCGGTGGAGGGTCTGGCGGAGGTGGCGGCTATGGAGGAGGAGGGAAAGGAGGAGGCGGGAAAGGCGGAGGAGGTAGTGGGTCGGGAGGAGGTGGTAAAGGCGGAGGAGGTGGGAAAGGCGGTGGAGGAAGTGGGTCAGGAGGAGGTGGGAAAGGCGGTGGAGGAGGTGGATATGGAGGAGGAGGAAGTGGGTCAGGTGGAGGCGGTAAAGGCGGAGGAGGAGGAGGAGGAGGGTACGAAGATAGCGAGTTCTCAAGAGGAGGCGGCGGAGGCTGGAAGGGAGGTGGCAGAGGAGGCGGTTGGAGAGGCGGTGGAGGAAGAGGAGTTCTGGCTAGACACTCTGTTTCAATTAAACTCCAACATACCATGACAACGGCAACGAAACTTAGCTTCTCGCCAATTTCTGAGCAATCCATCGAGTCGGAGGCACCATATCGTCTTCTTCACCATCAATGCCTTCTTGATCTCCATGTCGTCAGTTTTTTCACCGGAAAAGTCGCCGAACAAAGAACCCATCTTGCCGTCAATTTTGAGCCATCCGGGAATATCCACCAGAGCAGAGGATTGATTGATTATCCGTTATCTGGGTTCCGTGTGTTCTTGTCGAAATGGATTTTGGGATCATGTTTAAATTGGAGTTTCTAA ATGAAGTCTAAAGGTTTTCTTTTTGTGTGTCTTCTTCTTGCGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACACAGCATACCCAAGAAGAGGAACAAGTGAATCTAGGCCATGATGTAGAAGAGTCTAAACATAGAGACAGCGGTGGTGGCAGCTATGGAGGATCTGGCGGAGGGTCTAGTGGAGGAGGGTCTGGCGGCAGTGGATCAGGGGGAGGTGGCTACGGCGGCGGTGGTGGCCATGGCGGAGGTGGGACTGGTAGTGGCGGCCAAGGCGGTGGAGGATCTGGCGGAGGCGGTCACGGAGGTGGCGGAGGGGGTCACGGCGGTGGAGGGTCTGGCGGAGGTGGCGGCTATGGAGGAGGAGGGAAAGGAGGAGGCGGGAAAGGCGGAGGAGGTAGTGGGTCGGGAGGAGGTGGTAAAGGCGGAGGAGGTGGGAAAGGCGGTGGAGGAAGTGGGTCAGGAGGAGGTGGGAAAGGCGGTGGAGGAGGTGGATATGGAGGAGGAGGAAGTGGGTCAGGTGGAGGCGGTAAAGGCGGAGGAGGAGGAGGAGGAGGGTACGAAGATAGCGAGTTCTCAAGAGGAGGCGGCGGAGGCTGGAAGGGAGGTGGCAGAGGAGGCGGTTGGAGAGGCGGTGGAGGAAGAGGAGTTCTGGCTAGACACTCTGTTTCAATTAAACTCCAACATACCATGACAACGGCAACGAAACTTAGCTTCTCGCCAATTTCTGAGCAATCCATCGAGTCGGAGGCACCATATCGTCTTCTTCACCATCAATGCCTTCTTGATCTCCATGTCGTCAGTTTTTTCACCGGAAAAGTCGCCGAACAAAGAACCCATCTTGCCGTCAATTTTGAGCCATCCGGGAATATCCACCAGAGCAGAGGATTGATTGATTATCCGTTATCTGGGTTCCGTGTGTTCTTGTCGAAATGGATTTTGGGATCATGTTTAAATTGGAGTTTCTAA MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGGGSYGGSGGGSSGGGSGGSGSGGGGYGGGGGHGGGGTGSGGQGGGGSGGGGHGGGGGGHGGGGSGGGGGYGGGGKGGGGKGGGGSGSGGGGKGGGGGKGGGGSGSGGGGKGGGGGGYGGGGSGSGGGGKGGGGGGGGYEDSEFSRGGGGGWKGGGRGGGWRGGGGRGVLARHSVSIKLQHTMTTATKLSFSPISEQSIESEAPYRLLHHQCLLDLHVVSFFTGKVAEQRTHLAVNFEPSGNIHQSRGLIDYPLSGFRVFLSKWILGSCLNWSF Homology
BLAST of Clc02G09720 vs. NCBI nr
Match: KAE8652267.1 (hypothetical protein Csa_022106 [Cucumis sativus]) HSP 1 Score: 94.0 bits (232), Expect = 2.6e-15 Identity = 166/225 (73.78%), Postives = 176/225 (78.22%), Query Frame = 0
BLAST of Clc02G09720 vs. NCBI nr
Match: XP_031737067.1 (acanthoscurrin-2 [Cucumis sativus]) HSP 1 Score: 88.2 bits (217), Expect = 1.4e-13 Identity = 169/230 (73.48%), Postives = 176/230 (76.52%), Query Frame = 0
BLAST of Clc02G09720 vs. NCBI nr
Match: XP_023534315.1 (acanthoscurrin-2-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-12 Identity = 165/225 (73.33%), Postives = 178/225 (79.11%), Query Frame = 0
BLAST of Clc02G09720 vs. NCBI nr
Match: XP_023534314.1 (acanthoscurrin-2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 83.6 bits (205), Expect = 3.5e-12 Identity = 167/239 (69.87%), Postives = 183/239 (76.57%), Query Frame = 0
BLAST of Clc02G09720 vs. NCBI nr
Match: XP_023534313.1 (acanthoscurrin-2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.8 bits (203), Expect = 6.0e-12 Identity = 165/239 (69.04%), Postives = 180/239 (75.31%), Query Frame = 0
BLAST of Clc02G09720 vs. ExPASy TrEMBL
Match: A0A6J1I5V7 (acanthoscurrin-2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.0e-10 Identity = 154/220 (70.00%), Postives = 164/220 (74.55%), Query Frame = 0
BLAST of Clc02G09720 vs. ExPASy TrEMBL
Match: A0A6J1I123 (acanthoscurrin-2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 8.7e-09 Identity = 160/221 (72.40%), Postives = 172/221 (77.83%), Query Frame = 0
BLAST of Clc02G09720 vs. ExPASy TrEMBL
Match: A0A6J1I2D6 (acanthoscurrin-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-08 Identity = 158/221 (71.49%), Postives = 169/221 (76.47%), Query Frame = 0
BLAST of Clc02G09720 vs. ExPASy TrEMBL
Match: A0A5D3CJ77 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00080 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-04 Identity = 146/212 (68.87%), Postives = 156/212 (73.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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