Clc02G05470 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTCCTTAAACTCAGAAACAAAAAGCAAGCAATTGTAGTTACGAGAAGCACTTTATCATATCTACTTATGGGTATCTTCAAGAAAAACATGTTGATTTTTGTTGGTGTTCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAGTTATATTGGAGCTCCTCAAGGTGGTGTGGAGGTTGTATGTAGTCCAGAAGATCCAAGAGTTTACAACCTGAATTATGCTAACCAAGAACCAAGTGAATTCAATGATGTTGATGGTTGCAGACCTCAAAAAGATCATCAACATAACATCAATGGTGATGGATTGGGAAATATGGCTCCTCAAAGCCCAAAAGAAGATAAAAGTATTGTTACTTCTCTACCATATATGAATTAAATTCATGTGGAAAGTCCATTCTCTTTTTGTTTTTTAAAAGGATTCTTTGCTTGTTGTCTTATCCCCATATAAATTGCAATG ATTGTCCTTAAACTCAGAAACAAAAAGCAAGCAATTGTAGTTACGAGAAGCACTTTATCATATCTACTTATGGGTATCTTCAAGAAAAACATGTTGATTTTTGTTGGTGTTCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAGTTATATTGGAGCTCCTCAAGGTGGTGTGGAGGTTGTATGTAGTCCAGAAGATCCAAGAGTTTACAACCTGAATTATGCTAACCAAGAACCAAGTGAATTCAATGATGTTGATGGTTGCAGACCTCAAAAAGATCATCAACATAACATCAATGGTGATGGATTGGGAAATATGGCTCCTCAAAGCCCAAAAGAAGATAAAAGTATTGTTACTTCTCTACCATATATGAATTAAATTCATGTGGAAAGTCCATTCTCTTTTTGTTTTTTAAAAGGATTCTTTGCTTGTTGTCTTATCCCCATATAAATTGCAATG ATGGGTATCTTCAAGAAAAACATGTTGATTTTTGTTGGTGTTCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAGTTATATTGGAGCTCCTCAAGGTGGTGTGGAGGTTGTATGTAGTCCAGAAGATCCAAGAGTTTACAACCTGAATTATGCTAACCAAGAACCAAGTGAATTCAATGATGTTGATGGTTGCAGACCTCAAAAAGATCATCAACATAACATCAATGGTGATGGATTGGGAAATATGGCTCCTCAAAGCCCAAAAGAAGATAAAAGTATTGTTACTTCTCTACCATATATGAATTAA MGIFKKNMLIFVGVLVISTNLIEITKAIRSISYIGAPQGGVEVVCSPEDPRVYNLNYANQEPSEFNDVDGCRPQKDHQHNINGDGLGNMAPQSPKEDKSIVTSLPYMN Homology
BLAST of Clc02G05470 vs. NCBI nr
Match: KAE8646139.1 (hypothetical protein Csa_016560, partial [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17 Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 0
BLAST of Clc02G05470 vs. NCBI nr
Match: KAA0036627.1 (hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa] >TYK03365.1 hypothetical protein E5676_scaffold2392G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 62/118 (52.54%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of Clc02G05470 vs. ExPASy TrEMBL
Match: A0A0A0K4C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269040 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17 Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Clc02G05470 vs. ExPASy TrEMBL
Match: A0A0A0K7P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269030 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17 Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 0
BLAST of Clc02G05470 vs. ExPASy TrEMBL
Match: A0A5D3BWB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2392G00270 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.4e-17 Identity = 62/118 (52.54%), Postives = 72/118 (61.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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