|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAGACCCAGAGGAACTAGACTATGGTGTGCAGAAGTATCAAAAGGAAAAGGTAAAGTGGCATCTCGTTCTTTTCTCCATCCAATCAACGATAAACAGTTAAAAGTTGAAGGGAAATGATACCAATTCTAGGCTTAAACTTTTTCAATCATTTGGTCCTTGGGTAAAAAGGTAGTACAAGAATCTAATGAAAGTGATTTTTCTCTCTCAACAATCAACAACCAGAGCAGAAGCAGAGTAAAAAAAATGAACAGATAGTTTGGTAGAGAGAGATATATAGAGGGAGAGGGTTGTAAGAACCCCAAAATAAATGCAGGTCATGTTAGGAGGTAGCACGTACATCGTAAACTTCCACTGCCCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACAAGAGTCCTACTTCTTCTTTGGCCCGTCCTGACAGCAATGTGCTAGATGTAGATCTTCAAAAGAGACATCTCCATTGTTGCCATAAAAATCTTCACTGTTTCTTCACATTCAAAGCAATCCCATTCACAATTATCTAG mRNA sequence ATGGCAGACCCAGAGGAACTAGACTATGGTGTGCAGAAGTATCAAAAGGAAAAGGTCATGTTAGGAGGTAGCACGTACATCGTAAACTTCCACTGCCCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACAAGAGTCCTACTTCTTCTTTGGCCCGTCCTGACAGCAATGTGCTAGATGTAGATCTTCAAAAGAGACATCTCCATTGTTGCCATAAAAATCTTCACTGTTTCTTCACATTCAAAGCAATCCCATTCACAATTATCTAG Coding sequence (CDS) ATGGCAGACCCAGAGGAACTAGACTATGGTGTGCAGAAGTATCAAAAGGAAAAGGTCATGTTAGGAGGTAGCACGTACATCGTAAACTTCCACTGCCCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACAAGAGTCCTACTTCTTCTTTGGCCCGTCCTGACAGCAATGTGCTAGATGTAGATCTTCAAAAGAGACATCTCCATTGTTGCCATAAAAATCTTCACTGTTTCTTCACATTCAAAGCAATCCCATTCACAATTATCTAG Protein sequence MADPEELDYGVQKYQKEKVMLGGSTYIVNFHCPPFAYGVESLVVKCWHHQVGDADTATRWSIYKSPTSSLARPDSNVLDVDLQKRHLHCCHKNLHCFFTFKAIPFTII
Homology
BLAST of Clc02G03000 vs. NCBI nr
Match: KGN43406.1 (hypothetical protein Csa_020315 [Cucumis sativus]) HSP 1 Score: 104.8 bits (260), Expect = 4.9e-19 Identity = 50/62 (80.65%), Postives = 51/62 (82.26%), Query Frame = 0
Query: 18 KVMLGGSTYIVNFHCPPFAYGVESLVVKCWHHQVGDADTATRWSIYKS-PTSSLARPDSN 77
+ MLGGSTYIVN HC PFAYGVESLVVKCWHHQVGDADTATRWSIY S SL DSN
Sbjct: 2 QAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADSN 61
Query: 78 VL 79
VL
Sbjct: 62 VL 63
BLAST of Clc02G03000 vs. ExPASy TrEMBL
Match: A0A0A0K6F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031670 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.4e-19 Identity = 50/62 (80.65%), Postives = 51/62 (82.26%), Query Frame = 0
Query: 18 KVMLGGSTYIVNFHCPPFAYGVESLVVKCWHHQVGDADTATRWSIYKS-PTSSLARPDSN 77
+ MLGGSTYIVN HC PFAYGVESLVVKCWHHQVGDADTATRWSIY S SL DSN
Sbjct: 2 QAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADSN 61
Query: 78 VL 79
VL
Sbjct: 62 VL 63
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN43406.1 | 4.9e-19 | 80.65 | hypothetical protein Csa_020315 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K6F3 | 2.4e-19 | 80.65 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031670 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
