Clc02G02070 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G02070
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich cell wall structural protein 1-like
LocationClcChr02: 1934529 .. 1936021 (+)
RNA-Seq ExpressionClc02G02070
SyntenyClc02G02070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACAAGCTAAAAAGATCTTTTTGGTCGAGAAATTAAAGAAGCTACCAAGCTACTCATGGGTGGCTCTCCAAAATGGTTCTCTCTTGCTCTTCTCATTCTCTGCATTGTCCTCCATTTGAGTGCTATTGCTCTTGGGGATGATAAGCTTGATAAGACTGGGTTTCGGGATGATGATTGTCGTTGGGGCAGGCGCTGCGGTGGTAGATTTGGAGGACGTGGACCGCGCTTCGGTAGGGGAGGTGGTTTTGGTGGCGGTAGAGGTGGTGGATTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGCGGTGGAGTAGGTGGCGGTGCTGGAGGTGGTGTTGGTGGAGGTGGCGGTTTTGGAGGCGGTGGAGGAGGTGGGTTGGGAGGTGGTTCAGGACATGGTGGAGGATTTGGGGCTGGAGGTGGCGTTGGAGGTGGTGCTGGAGGAGGAGTTGGGGGTGGAAGTGGATTTGGTGGGGGCGGTGGCGGCGGTATTGGTGGTGGGTCTGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTGTTGGTAGTGGTGTTGGTGGAGGTGCTGGAGGAGGAGGTGGAGGCGGAGGAGGAGGTGGTGGCGGCGGCGGTGGCATTGGTGGTGGTCATGGTGGGGGCTTTGGAGCTGGCGGAGGTGTTGGTGGTGGTATTGGTGGTGGTGCAGGAGGAGGAGGTGGTGGTGGAGGTAGCGGTGGTGGTGGCGGCATTGGTGGTGGGTCCGGCCATGGTGGGGGCTTTGGAGCTGGTGGAGGTATAGGTAGCGGTGTCGGTGGAGGTGCTGGCGGTGGAGGTGGAGGCGGAGGAGGAGGTGGTGGTGGTGGTTTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGAGGTGGCATTGGAGGTGGAGCTGGTGGAGGAATTGGAGGTGGTGGAGGAGCTGGAGGTGGTGCAGGTGGAGGGATTGGAGGAGGTGCTGGAAGTGGTGGTGGCTTAGGAGGAGGTGGTGGTCATGGAGGAGGATTTGGAATCGGAATAGGGATTGGAGTGGGAATAGGTGGTGGATCTGGTCATGGTGTCGGTGTTGGCTCTGGATCTGGTGGAGGAGGCAGTGGTCATTAAAATTGATCTATTTCGTTTTATAGATTACTCCAAAGTTCATAGTATGTGAATCAAAGTTCAAATATTGTAACCTTCTCAAAGATCAAATGGTTACGTCTCCATCCCTACAATCATTGAACTAAAAGAAGACTTAGGAGAATGGATTTTGTAATGTTTTTAAGTACATTGATCTCTTATAAAATTTCATCCTCTAATTGTCTCTCCCATTGAATTTTATAATCCTAAAACTATTGTCACATGTAATAAAATAAAAGTAGAGATATCAAAATCAAGCAAAGTAAAGTTTGTAATGTGTTAATGATCATTAATGGAGTTTACATGTCAATTCGAACATAATTATGTGGATAATGCATT

mRNA sequence

AGACAAGCTAAAAAGATCTTTTTGGTCGAGAAATTAAAGAAGCTACCAAGCTACTCATGGGTGGCTCTCCAAAATGGTTCTCTCTTGCTCTTCTCATTCTCTGCATTGTCCTCCATTTGAGTGCTATTGCTCTTGGGGATGATAAGCTTGATAAGACTGGGTTTCGGGATGATGATTGTCGTTGGGGCAGGCGCTGCGGTGGTAGATTTGGAGGACGTGGACCGCGCTTCGGTAGGGGAGGTGGTTTTGGTGGCGGTAGAGGTGGTGGATTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGCGGTGGAGTAGGTGGCGGTGCTGGAGGTGGTGTTGGTGGAGGTGGCGGTTTTGGAGGCGGTGGAGGAGGTGGGTTGGGAGGTGGTTCAGGACATGGTGGAGGATTTGGGGCTGGAGGTGGCGTTGGAGGTGGTGCTGGAGGAGGAGTTGGGGGTGGAAGTGGATTTGGTGGGGGCGGTGGCGGCGGTATTGGTGGTGGGTCTGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTGTTGGTAGTGGTGTTGGTGGAGGTGCTGGAGGAGGAGGTGGAGGCGGAGGAGGAGGTGGTGGCGGCGGCGGTGGCATTGGTGGTGGTCATGGTGGGGGCTTTGGAGCTGGCGGAGGTGTTGGTGGTGGTATTGGTGGTGGTGCAGGAGGAGGAGGTGGTGGTGGAGGTAGCGGTGGTGGTGGCGGCATTGGTGGTGGGTCCGGCCATGGTGGGGGCTTTGGAGCTGGTGGAGGTATAGGTAGCGGTGTCGGTGGAGGTGCTGGCGGTGGAGGTGGAGGCGGAGGAGGAGGTGGTGGTGGTGGTTTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGAGGTGGCATTGGAGGTGGAGCTGGTGGAGGAATTGGAGGTGGTGGAGGAGCTGGAGGTGGTGCAGGTGGAGGGATTGGAGGAGGTGCTGGAAGTGGTGGTGGCTTAGGAGGAGGTGGTGGTCATGGAGGAGGATTTGGAATCGGAATAGGGATTGGAGTGGGAATAGGTGGTGGATCTGGTCATGGTGTCGGTGTTGGCTCTGGATCTGGTGGAGGAGGCAGTGGTCATTAAAATTGATCTATTTCGTTTTATAGATTACTCCAAAGTTCATAGTATGTGAATCAAAGTTCAAATATTGTAACCTTCTCAAAGATCAAATGGTTACGTCTCCATCCCTACAATCATTGAACTAAAAGAAGACTTAGGAGAATGGATTTTGTAATGTTTTTAAGTACATTGATCTCTTATAAAATTTCATCCTCTAATTGTCTCTCCCATTGAATTTTATAATCCTAAAACTATTGTCACATGTAATAAAATAAAAGTAGAGATATCAAAATCAAGCAAAGTAAAGTTTGTAATGTGTTAATGATCATTAATGGAGTTTACATGTCAATTCGAACATAATTATGTGGATAATGCATT

Coding sequence (CDS)

ATGGGTGGCTCTCCAAAATGGTTCTCTCTTGCTCTTCTCATTCTCTGCATTGTCCTCCATTTGAGTGCTATTGCTCTTGGGGATGATAAGCTTGATAAGACTGGGTTTCGGGATGATGATTGTCGTTGGGGCAGGCGCTGCGGTGGTAGATTTGGAGGACGTGGACCGCGCTTCGGTAGGGGAGGTGGTTTTGGTGGCGGTAGAGGTGGTGGATTTGGTGGTGGTAGGGGTGGAGGACTTGGTGGTGGATCGGGTGGAGGGTTTGGAGGTGGCGGTGGAGTAGGTGGCGGTGCTGGAGGTGGTGTTGGTGGAGGTGGCGGTTTTGGAGGCGGTGGAGGAGGTGGGTTGGGAGGTGGTTCAGGACATGGTGGAGGATTTGGGGCTGGAGGTGGCGTTGGAGGTGGTGCTGGAGGAGGAGTTGGGGGTGGAAGTGGATTTGGTGGGGGCGGTGGCGGCGGTATTGGTGGTGGGTCTGGTCATGGTGGAGGTTTTGGAGCTGGAGGAGGTGTTGGTAGTGGTGTTGGTGGAGGTGCTGGAGGAGGAGGTGGAGGCGGAGGAGGAGGTGGTGGCGGCGGCGGTGGCATTGGTGGTGGTCATGGTGGGGGCTTTGGAGCTGGCGGAGGTGTTGGTGGTGGTATTGGTGGTGGTGCAGGAGGAGGAGGTGGTGGTGGAGGTAGCGGTGGTGGTGGCGGCATTGGTGGTGGGTCCGGCCATGGTGGGGGCTTTGGAGCTGGTGGAGGTATAGGTAGCGGTGTCGGTGGAGGTGCTGGCGGTGGAGGTGGAGGCGGAGGAGGAGGTGGTGGTGGTGGTTTGGGAGGAGGTTCTGGTCATGGAGGTGGATTTGGAGCCGGAGGTGGCATTGGAGGTGGAGCTGGTGGAGGAATTGGAGGTGGTGGAGGAGCTGGAGGTGGTGCAGGTGGAGGGATTGGAGGAGGTGCTGGAAGTGGTGGTGGCTTAGGAGGAGGTGGTGGTCATGGAGGAGGATTTGGAATCGGAATAGGGATTGGAGTGGGAATAGGTGGTGGATCTGGTCATGGTGTCGGTGTTGGCTCTGGATCTGGTGGAGGAGGCAGTGGTCATTAA

Protein sequence

MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFRDDDCRWGRRCGGRFGGRGPRFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGSGHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGGGAGGGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGAGGGGGGGGSGGGGGIGGGSGHGGGFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGGAGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGSGH
Homology
BLAST of Clc02G02070 vs. NCBI nr
Match: XP_011659702.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypothetical protein Csa_020488 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 5.5e-59
Identity = 314/366 (85.79%), Postives = 320/366 (87.43%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFR-DDDCRWGRRCGGRFGGRGP--- 60
           MGGS KWFSL LL LCIVLHLSAI LGDDKL+K GFR DDDCRWGRRCGGRFGGRG    
Sbjct: 1   MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGRGGF 60

Query: 61  RFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120
             GRGGGFGGGRGGG GGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL
Sbjct: 61  GGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GGGSGHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGG 180
           GGGSGHGGGF  GGGVGGGAGGGVGGG GFGGGGGGG+GGGSGHGGG GAGGGVG GVGG
Sbjct: 121 GGGSGHGGGF--GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGIGAGGGVGGGVGG 180

Query: 181 GAGGGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGA-GGGGGGGGSGGGGGIGGG 240
           GA GGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGG+GGGA GGGGGGGG GGGGGIGGG
Sbjct: 181 GA-GGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIGGG 240

Query: 241 SGHGGGFGAGGGIGSGVGGGA-GGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGG 300
           SGHGGGFGAGGG+G G+GGGA GGGGGGGGGGGGGGLGGGSGHGGGFG GGG+GGGAGG 
Sbjct: 241 SGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGLGGGSGHGGGFGGGGGLGGGAGG- 300

Query: 301 IGGGGGAGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSG 360
                      GGGIGGGA        GGGHGGG GIGIGIGVGIGGGSGHGVGVGSGSG
Sbjct: 301 -----------GGGIGGGA--------GGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSG 343

BLAST of Clc02G02070 vs. NCBI nr
Match: XP_023511646.1 (glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 4.8e-55
Identity = 313/359 (87.19%), Postives = 317/359 (88.30%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFRDDDCRWGRRCGGRFGGRGPRFGR 60
           MGGSPKW SL LL LCIVLHLSAIALGDDKL K+ FRDDDC WGRRCGGRFGGRGPRFGR
Sbjct: 1   MGGSPKWVSLGLLTLCIVLHLSAIALGDDKLGKSRFRDDDC-WGRRCGGRFGGRGPRFGR 60

Query: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGS 120
           GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGG GGG+GGGGG GGGGGGGLGGGS
Sbjct: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGGGGGIGGGGGLGGGGGGGLGGGS 120

Query: 121 GHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGGGAGG 180
           G GGGFGAGGGVGGGA    GGG G GGGGGGGIGGGSGHGGGFGAGGGVG G GGG GG
Sbjct: 121 GQGGGFGAGGGVGGGA----GGGGGLGGGGGGGIGGGSGHGGGFGAGGGVGGGAGGGGGG 180

Query: 181 GGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGAGGGGGGGGSGGGGGIGGGSGHGG 240
           GGGGGGGGGGG GG G GHGGGFGAGGGVGGGIGGGAGGGGGGGG GGGGGIGGGSGHGG
Sbjct: 181 GGGGGGGGGGGIGG-GSGHGGGFGAGGGVGGGIGGGAGGGGGGGG-GGGGGIGGGSGHGG 240

Query: 241 GFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGG 300
           GFGAGG    GVGGG  GGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGG   GG GGGGG
Sbjct: 241 GFGAGG----GVGGGGLGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGG--VGGAGGGGG 300

Query: 301 AGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGSG 360
            GGG+GGGIGGG+        GGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGG G
Sbjct: 301 LGGGSGGGIGGGS--------GGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 338

BLAST of Clc02G02070 vs. NCBI nr
Match: KAG7011907.1 (hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.3 bits (534), Expect = 2.8e-50
Identity = 302/359 (84.12%), Postives = 305/359 (84.96%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFRDDDCRWGRRCGGRFGGRGPRFGR 60
           MGGSPKW SL LL LCIVLHLSA ALGDDKLDK+ FRDDDC WGRRCGGRFGGRGPRFGR
Sbjct: 1   MGGSPKWVSLGLLALCIVLHLSAFALGDDKLDKSRFRDDDC-WGRRCGGRFGGRGPRFGR 60

Query: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGS 120
           GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGG      GGGGG GGGGGGGLGGGS
Sbjct: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGG------GGGGGLGGGGGGGLGGGS 120

Query: 121 GHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGGGAGG 180
           G GGGFGAGGGVGGGA    GGG G GGGGGGGIGGGSGHGGGFGAGGG+G G GGG GG
Sbjct: 121 GQGGGFGAGGGVGGGA----GGGGGLGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGG 180

Query: 181 GGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGAGGGGGGGGSGGGGGIGGGSGHGG 240
           GGGGGGGGGGG GG G GHGGGFGAGGGVGGGIGGGAGGGGGGGG GGGGGIGGGSGHGG
Sbjct: 181 GGGGGGGGGGGIGG-GSGHGGGFGAGGGVGGGIGGGAGGGGGGGG-GGGGGIGGGSGHGG 240

Query: 241 GFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGG 300
           GFGAGG    GVGGG  GGGGGGGGGGGGGLGGGSGHG GF        GAGGGIGGGGG
Sbjct: 241 GFGAGG----GVGGGGLGGGGGGGGGGGGGLGGGSGHGSGF--------GAGGGIGGGGG 300

Query: 301 AGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGSG 360
           AGG  GGGIGGG+G         GHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGG G
Sbjct: 301 AGG--GGGIGGGSGI--------GHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 324

BLAST of Clc02G02070 vs. NCBI nr
Match: KAG6572290.1 (hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-49
Identity = 297/359 (82.73%), Postives = 301/359 (83.84%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFRDDDCRWGRRCGGRFGGRGPRFGR 60
           MGGSPKW SL LL LCIVLHLSA ALGDDKLDK+ FRDDDC WGRRCGGRFGGRGPRFGR
Sbjct: 1   MGGSPKWVSLGLLALCIVLHLSAFALGDDKLDKSRFRDDDC-WGRRCGGRFGGRGPRFGR 60

Query: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGS 120
           GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGG      GGGGG GGGGGGGLGGGS
Sbjct: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGG------GGGGGLGGGGGGGLGGGS 120

Query: 121 GHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGGGAGG 180
           G GGGFGAGGGVGGGA    GGG G GGGGGGGIGGGSGHGGGFGAGGG+G G GGG GG
Sbjct: 121 GQGGGFGAGGGVGGGA----GGGGGLGGGGGGGIGGGSGHGGGFGAGGGLGGGAGGGGGG 180

Query: 181 GGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGAGGGGGGGGSGGGGGIGGGSGHGG 240
           GGGGGGGGGGG GG G GHGGGFGAGGGVGGGIGGGAGGGGGGGG GGGGGIGGGSGHGG
Sbjct: 181 GGGGGGGGGGGIGG-GSGHGGGFGAGGGVGGGIGGGAGGGGGGGG-GGGGGIGGGSGHGG 240

Query: 241 GFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGG 300
           GFGAGGG+      G GG GGGGGGGGGGGLGGGSGHG GFGAGGGIGG  GGG GGGGG
Sbjct: 241 GFGAGGGV------GGGGLGGGGGGGGGGGLGGGSGHGSGFGAGGGIGG--GGGAGGGGG 300

Query: 301 AGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGSG 360
            GGG+                G GHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGG G
Sbjct: 301 IGGGS----------------GVGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGGG 322

BLAST of Clc02G02070 vs. NCBI nr
Match: KAG6589159.1 (hypothetical protein SDJN03_17724, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.7 bits (465), Expect = 2.8e-42
Identity = 271/361 (75.07%), Postives = 284/361 (78.67%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFRDDDCRWGRRCGGRFGGRGPRFGR 60
           MGGSPKW SL  L++CIVLHLSA+AL D+KL+K+ FRDDDC WGRRCGGR+GGRGPR+GR
Sbjct: 1   MGGSPKWVSLGFLVICIVLHLSALALADNKLEKSRFRDDDC-WGRRCGGRYGGRGPRYGR 60

Query: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGS 120
           GGGFGGGRGGGFGGGR    GGGSGGGFGGGGGVGGG             GGGGG+GGGS
Sbjct: 61  GGGFGGGRGGGFGGGR----GGGSGGGFGGGGGVGGGV------------GGGGGVGGGS 120

Query: 121 GHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGGGAGG 180
           GHGGGFGAGGGVGGGAGGG GGG G GGGGGGG GGGSGHGGGFGAGGG+GS    GAGG
Sbjct: 121 GHGGGFGAGGGVGGGAGGG-GGGGGGGGGGGGGNGGGSGHGGGFGAGGGIGS----GAGG 180

Query: 181 GGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGAGGGGGGGGSGGGGGIGGGSGHGG 240
           GGGGGGGGGGGG G G GHGGGFGAGGGVG G G   GGGGGGGG GGGGG GGGSGHGG
Sbjct: 181 GGGGGGGGGGGGSGSGSGHGGGFGAGGGVGSGAG---GGGGGGGGGGGGGGSGGGSGHGG 240

Query: 241 GFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGG 300
           GFG GGG+GSG GG  GGGGGGGGGGGGGGLGGGSGHGGGFGA                 
Sbjct: 241 GFGVGGGVGSGAGG--GGGGGGGGGGGGGGLGGGSGHGGGFGA----------------- 300

Query: 301 AGGGAGGGIGGGAGSGGGL--GGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGS 360
                    GGGAGSGGGL  GG GGHGGGFGIGIGIG+G+G GSG GVGVGSGSGGGG 
Sbjct: 301 ---------GGGAGSGGGLGHGGSGGHGGGFGIGIGIGIGVGSGSGRGVGVGSGSGGGGG 308

BLAST of Clc02G02070 vs. ExPASy Swiss-Prot
Match: P09789 (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.6e-27
Identity = 278/395 (70.38%), Postives = 300/395 (75.95%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGF-RDDDCRWGRR-C-GGRFGGRGPR 60
           MG S KW    LL   I   L+AI L DDKL+++ +  D+ C +GRR C GGRFGGRGP 
Sbjct: 1   MGSSQKWVIGLLLFSSIFFELTAITLADDKLEESRWGNDNGCGFGRRGCGGGRFGGRGPS 60

Query: 61  FGRGGGFGGGRGGGFGGGRGGGLGG----------GSGGGFGG--------GGGVGGGAG 120
           FGRG G GGG GGG GGG GGGLGG          G GGG GG        GGG GGGAG
Sbjct: 61  FGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGAG 120

Query: 121 GGVGGGGGFGG------GGGGGLGGGSGHGGGFGAGGGVGG--GAGGGVGGGSGFGGGGG 180
           GG+GGGGG GG      GGGGG+GGG+G GGGFGAGGGVGG  GAGGGVGGG GFGGGGG
Sbjct: 121 GGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAGAGGGVGGGGGFGGGGG 180

Query: 181 GGIGGGSGHGGGFGAGGGVGSGVGGGAGGG-GGGGGGGGGGGGGIGG--GHGGGFGAGGG 240
           GG+GGGSGHGGGFGAGGGVG G GGG GGG GGGGGGG GGGGGIGG  GHGGGFGAGGG
Sbjct: 181 GGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGG 240

Query: 241 VGGGIGGGA---GGGGGGGGSGGGGGIGGGSGHGGGFGAGGGIGSGVGGGAGGGGGGGGG 300
           VGGG+GGGA   GGGGGGGG GGGGG+GGGSGHGGGFGAGGG+G G  GG  GGGGG GG
Sbjct: 241 VGGGVGGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAAGGV-GGGGGFGG 300

Query: 301 GGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGGAGGGAGGGIGGGAGSGGGLGGGGGH 360
           GGGGG+GGGSGHGGGFGAGGG+GGGAGGG+GGGGGAGG            GGG+GGG G 
Sbjct: 301 GGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGGGAGG------------GGGIGGGHGG 360

BLAST of Clc02G02070 vs. ExPASy TrEMBL
Match: A0A0A0K3J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.7e-59
Identity = 314/366 (85.79%), Postives = 320/366 (87.43%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFR-DDDCRWGRRCGGRFGGRGP--- 60
           MGGS KWFSL LL LCIVLHLSAI LGDDKL+K GFR DDDCRWGRRCGGRFGGRG    
Sbjct: 1   MGGSQKWFSLGLLTLCIVLHLSAIVLGDDKLNKNGFRDDDDCRWGRRCGGRFGGRGRGGF 60

Query: 61  RFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120
             GRGGGFGGGRGGG GGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL
Sbjct: 61  GGGRGGGFGGGRGGGLGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GGGSGHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGG 180
           GGGSGHGGGF  GGGVGGGAGGGVGGG GFGGGGGGG+GGGSGHGGG GAGGGVG GVGG
Sbjct: 121 GGGSGHGGGF--GGGVGGGAGGGVGGGGGFGGGGGGGVGGGSGHGGGIGAGGGVGGGVGG 180

Query: 181 GAGGGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGA-GGGGGGGGSGGGGGIGGG 240
           GA GGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGG+GGGA GGGGGGGG GGGGGIGGG
Sbjct: 181 GA-GGGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGVGGGAGGGGGGGGGGGGGGGIGGG 240

Query: 241 SGHGGGFGAGGGIGSGVGGGA-GGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGG 300
           SGHGGGFGAGGG+G G+GGGA GGGGGGGGGGGGGGLGGGSGHGGGFG GGG+GGGAGG 
Sbjct: 241 SGHGGGFGAGGGVGGGIGGGAGGGGGGGGGGGGGGGLGGGSGHGGGFGGGGGLGGGAGG- 300

Query: 301 IGGGGGAGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSG 360
                      GGGIGGGA        GGGHGGG GIGIGIGVGIGGGSGHGVGVGSGSG
Sbjct: 301 -----------GGGIGGGA--------GGGHGGGIGIGIGIGVGIGGGSGHGVGVGSGSG 343

BLAST of Clc02G02070 vs. ExPASy TrEMBL
Match: A0A6J1JK95 (glycine-rich cell wall structural protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486564 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-40
Identity = 272/361 (75.35%), Postives = 283/361 (78.39%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIALGDDKLDKTGFRDDDCRWGRRCGGRFGGRGPRFGR 60
           MGGSPKW SL  L++CIVLHLSA+AL D KL+K+ FRDDDC WGRRCGGR+GGRGPR+GR
Sbjct: 1   MGGSPKWVSLGFLVICIVLHLSALALADKKLEKSRFRDDDC-WGRRCGGRYGGRGPRYGR 60

Query: 61  GGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGLGGGS 120
           GGGFGGGRGGGFGGGR    GGGSGGG GG GGV    GGGVGGGGGFGG      GGGS
Sbjct: 61  GGGFGGGRGGGFGGGR----GGGSGGGLGGDGGV----GGGVGGGGGFGG------GGGS 120

Query: 121 GHGGGFGAGGGVGGGAGGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGVGGGAGG 180
           GHGGGFGAGGGVGGGAGGG GGG G GGGGGGG GGGSGHGGGFGAGGG+GS    GAGG
Sbjct: 121 GHGGGFGAGGGVGGGAGGG-GGGGGGGGGGGGGNGGGSGHGGGFGAGGGIGS----GAGG 180

Query: 181 GGGGGGGGGGGGGGIGGGHGGGFGAGGGVGGGIGGGAGGGGGGGGSGGGGGIGGGSGHGG 240
           GGGGGGGGGGGG G G GHGGGFGAGGGVG G      GGGGGGG GGGGG GGGSGHGG
Sbjct: 181 GGGGGGGGGGGGSGSGSGHGGGFGAGGGVGSG-----AGGGGGGGGGGGGGSGGGSGHGG 240

Query: 241 GFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAGGGIGGGGG 300
           GFG GGG+GSG GG  GGGGGGGGGGGGGGLGGGSGHGGGFGA                 
Sbjct: 241 GFGVGGGVGSGAGG--GGGGGGGGGGGGGGLGGGSGHGGGFGA----------------- 300

Query: 301 AGGGAGGGIGGGAGSGGGL--GGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSGSGGGGS 360
                    GGGAGSGGGL  GGGGGHGGGFGIGIGIG+G+G GSG GVGVGSGSGGGG 
Sbjct: 301 ---------GGGAGSGGGLGHGGGGGHGGGFGIGIGIGIGVGSGSGRGVGVGSGSGGGGG 308

BLAST of Clc02G02070 vs. ExPASy TrEMBL
Match: A0A5E4EQA0 (PREDICTED: glycine-rich cell wall structural OS=Prunus dulcis OX=3755 GN=ALMOND_2B009860 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.6e-38
Identity = 290/365 (79.45%), Postives = 308/365 (84.38%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIA-LGDDKLDKTGFR--DDDCRWGRR-CGGRFGGRGP 60
           MG SPKW SL+L++L IVL LSAI+ LGDDK+DKT FR  DDDC WGRR CGG       
Sbjct: 1   MGISPKWLSLSLVVLYIVLQLSAISTLGDDKVDKTRFRGDDDDCPWGRRSCGG------- 60

Query: 61  RFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120
           RFGRG    GGRGGG GGG G G GGG GGG G GGG+GGGAGGGVGGGGGFGGGGGGG+
Sbjct: 61  RFGRGRRGNGGRGGGIGGGGGFGGGGGHGGGGGAGGGLGGGAGGGVGGGGGFGGGGGGGV 120

Query: 121 GGGSGHGGGFGAGGGVGGGA--GGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGV 180
           GGGSGHGGGFGAGGGVGGGA  GGG+GGG G GGGGGGG+GGGSGHGGGFGAGGGVG G 
Sbjct: 121 GGGSGHGGGFGAGGGVGGGAGGGGGLGGGGGSGGGGGGGVGGGSGHGGGFGAGGGVGGGA 180

Query: 181 GGGAGGGGGGGGGGGGGGG-GIGGGHGGGFGAGGGVGGGIGGGAG-GGGGGGGSGGGGGI 240
           GGG GGGGGGG GGGGGGG G G GHGGGFGAGGGVGGG+GGG G GGGGGGGSGGGGG+
Sbjct: 181 GGGVGGGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGGGLGGGGGGGSGGGGGL 240

Query: 241 GGGSGHGGGFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAG 300
           GGGSGHGGGFGAGGG+G G GGG GGGGG GGGGGGGG+GGGSGHGGGFGAGGG+GGGAG
Sbjct: 241 GGGSGHGGGFGAGGGVGGGAGGGVGGGGGAGGGGGGGGVGGGSGHGGGFGAGGGVGGGAG 300

Query: 301 GGIGGGGGAGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSG 358
           GGIGGGGG G G GGG     G+GGG+GGGGGHGGGFGIGIGIGVG+G G+G G G GSG
Sbjct: 301 GGIGGGGGGGSGHGGGF----GAGGGVGGGGGHGGGFGIGIGIGVGVGAGAGSGQGSGSG 354

BLAST of Clc02G02070 vs. ExPASy TrEMBL
Match: A0A6J5UFK5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22601 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.8e-37
Identity = 286/365 (78.36%), Postives = 301/365 (82.47%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIA-LGDDKLDKTGFR--DDDCRWGRR-CGGRFGGRGP 60
           MG SPKW SL+L++L IVL LSAI+ LGDDK+DKT FR  DDDC WGRR CGGRF GRGP
Sbjct: 1   MGISPKWLSLSLVVLYIVLQLSAISTLGDDKVDKTRFRGDDDDCPWGRRSCGGRF-GRGP 60

Query: 61  RFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120
           R        GGRGGG GGG G G GGG GGG G GGG+GGGAGGGVGGGGGFGGGGGGGL
Sbjct: 61  R------GNGGRGGGIGGGGGFGGGGGHGGGRGAGGGLGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GGGSGHGGGFGAGGGVGGGA--GGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGV 180
           GGGSGHGGGFGAGGGVGGGA  GGG+GGG G GGGGGGG+GGGSGHGGGFGAGGGVG G 
Sbjct: 121 GGGSGHGGGFGAGGGVGGGAGGGGGLGGGGGSGGGGGGGVGGGSGHGGGFGAGGGVGGGA 180

Query: 181 GGGAGGGGGGGGGGGGGGG-GIGGGHGGGFGAGGGVGGGIGGGAG-GGGGGGGSGGGGGI 240
           GGG GGGGGGG GGGGGGG G G GHGGGFGAGGGVGGG+GGG G GGGGGGGSGGGGG+
Sbjct: 181 GGGLGGGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGGGLGGGGGGGSGGGGGL 240

Query: 241 GGGSGHGGGFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAG 300
           GGGSGHGGGFGAGGG+G G GGG  GGGGG GGGGGGG+GGGSGHGGGFGAGGG+GGGAG
Sbjct: 241 GGGSGHGGGFGAGGGVGGGAGGGV-GGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGAG 300

Query: 301 GGIGGGGGAGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSG 358
           GGIGGGGGAGG                GGGGGHGGGFGIGIGIGVG+G G+G G G GSG
Sbjct: 301 GGIGGGGGAGG----------------GGGGGHGGGFGIGIGIGVGVGAGAGSGQGSGSG 341

BLAST of Clc02G02070 vs. ExPASy TrEMBL
Match: A0A6J5WSF6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22343 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-36
Identity = 278/362 (76.80%), Postives = 294/362 (81.22%), Query Frame = 0

Query: 1   MGGSPKWFSLALLILCIVLHLSAIA-LGDDKLDKTGFR--DDDCRWGRR-CGGRFGGRGP 60
           MG SPKW SL+L++L IVL LSAI+ LGDDK+DKT FR  DDDC WGRR CGGRF GRGP
Sbjct: 1   MGISPKWLSLSLVVLYIVLQLSAISTLGDDKVDKTRFRGDDDDCPWGRRSCGGRF-GRGP 60

Query: 61  RFGRGGGFGGGRGGGFGGGRGGGLGGGSGGGFGGGGGVGGGAGGGVGGGGGFGGGGGGGL 120
           R                GGRGGG+GGG GGG G GGG+GGGAGGGVGGGGGFGGGGGGGL
Sbjct: 61  R--------------GNGGRGGGIGGGHGGGRGAGGGLGGGAGGGVGGGGGFGGGGGGGL 120

Query: 121 GGGSGHGGGFGAGGGVGGGA--GGGVGGGSGFGGGGGGGIGGGSGHGGGFGAGGGVGSGV 180
           GGGSGHGGGFGAGGGVGGGA  GGG+GGG G GGGGGGG+GGGSGHGGGFGAGGGVG G 
Sbjct: 121 GGGSGHGGGFGAGGGVGGGAGGGGGLGGGGGSGGGGGGGVGGGSGHGGGFGAGGGVGGGA 180

Query: 181 GGGAGGGGGGGGGGGGGGG-GIGGGHGGGFGAGGGVGGGIGGGAG-GGGGGGGSGGGGGI 240
           GGG GGGGGGG GGGGGGG G G GHGGGFGAGGGVGGG+GGG G GGGGGGGSGGGGG+
Sbjct: 181 GGGLGGGGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGVGGGGGLGGGGGGGSGGGGGL 240

Query: 241 GGGSGHGGGFGAGGGIGSGVGGGAGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGIGGGAG 300
           GGGSGHGGGFGAGGG+G G GGG  GGGGG GGGGGGG+GGGSGHGGGFGAGGG+GGGAG
Sbjct: 241 GGGSGHGGGFGAGGGVGGGAGGGV-GGGGGAGGGGGGGVGGGSGHGGGFGAGGGVGGGAG 300

Query: 301 GGIGGGGGAGGGAGGGIGGGAGSGGGLGGGGGHGGGFGIGIGIGVGIGGGSGHGVGVGSG 355
           GGIGGGGGAGG                GGGGGHGGGFGIGIGIGVG+G G+G G G GSG
Sbjct: 301 GGIGGGGGAGG----------------GGGGGHGGGFGIGIGIGVGVGAGAGSGQGSGSG 330

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659702.15.5e-5985.79glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN43514.1 hypoth... [more]
XP_023511646.14.8e-5587.19glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo][more]
KAG7011907.12.8e-5084.12hypothetical protein SDJN02_26814, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6572290.12.3e-4982.73hypothetical protein SDJN03_29018, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6589159.12.8e-4275.07hypothetical protein SDJN03_17724, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
P097897.6e-2770.38Glycine-rich cell wall structural protein 1 OS=Petunia hybrida OX=4102 GN=GRP-1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0K3J82.7e-5985.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043560 PE=4 SV=1[more]
A0A6J1JK951.6e-4075.35glycine-rich cell wall structural protein 1-like OS=Cucurbita maxima OX=3661 GN=... [more]
A0A5E4EQA07.6e-3879.45PREDICTED: glycine-rich cell wall structural OS=Prunus dulcis OX=3755 GN=ALMOND_... [more]
A0A6J5UFK53.8e-3778.36Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS22601 PE=4 S... [more]
A0A6J5WSF62.4e-3676.80Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22343 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 130..145
score: 53.91
coord: 182..200
score: 48.03
coord: 155..165
score: 39.77
coord: 7..23
score: 31.62
NoneNo IPR availablePANTHERPTHR40903GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKEcoord: 4..229
coord: 180..357

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G02070.1Clc02G02070.1mRNA