Homology
BLAST of Clc02G02030 vs. NCBI nr
Match:
XP_011658699.1 (protein RRP6-like 3 isoform X1 [Cucumis sativus] >KGN43518.1 hypothetical protein Csa_020572 [Cucumis sativus])
HSP 1 Score: 1650.2 bits (4272), Expect = 0.0e+00
Identity = 827/881 (93.87%), Postives = 847/881 (96.14%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHK+KIALVVASFAALTILFT R+RRKRRSV +SCYLRDDQKPQ AFKRVLADNSYS
Sbjct: 1 MELQHKLKIALVVASFAALTILFTARRRRKRRSVSTSCYLRDDQKPQYAFKRVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
AFKHL+LNMNKD DVNSHPYESEILSLLENSSPEF+FISERTDLTLSDTY WVET SQLE
Sbjct: 61 AFKHLKLNMNKDNDVNSHPYESEILSLLENSSPEFNFISERTDLTLSDTYAWVETVSQLE 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTH+EDYLVDTIALHDSMNLLRPVFAN
Sbjct: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLLRPVFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGV+TNKM
Sbjct: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPL ADMVQYARTDAHYLLYIANCLL ELKQVNENSSTDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLPADMVQYARTDAHYLLYIANCLLVELKQVNENSSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMAR 360
NMTCLQLYSKETEGSPGESAASSI SRHLNSQ GS LISCKTQFQD VRRLCAWRDLMAR
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSIWSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMAR 360
Query: 361 VHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHLD 420
VHDESLRYVLSDQAIVA+A QV KN GELYATI+Q DLNVDL S LFLPSPS VVCSHLD
Sbjct: 361 VHDESLRYVLSDQAIVAIAIQVPKNTGELYATIAQVDLNVDLSSSLFLPSPSSVVCSHLD 420
Query: 421 DIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN- 480
DIH LLHD GDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN
Sbjct: 421 DIHCLLHDNFGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNA 480
Query: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP
Sbjct: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
Query: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYR+HFPEHLKSHR
Sbjct: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHR 600
Query: 601 SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDM-AEPSDSGTNVE 660
SHDIVLLCVDCHE AHAAAEK+KRELAAEFGIPLFVRRVVDTKEAFDM AEPSDS TNV+
Sbjct: 601 SHDIVLLCVDCHETAHAAAEKYKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVQ 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMP KRQEELM +VM+YYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPLKRQEELMFVVMKYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRRLQKKKGLAFKHS QSVFPDAE Q+GACNIDTSTV +SSVD NNHMNSDSGSVSETC
Sbjct: 721 ERRRLQKKKGLAFKHSPQSVFPDAERQNGACNIDTSTVDSSSVDVNNHMNSDSGSVSETC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
VPGGEV+FSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVD+LL+EYGEDGIRQFCQRWRQV
Sbjct: 781 VPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDYLLKEYGEDGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKA P NE
Sbjct: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKAFPDNE 881
BLAST of Clc02G02030 vs. NCBI nr
Match:
XP_038887745.1 (protein RRP6-like 3 [Benincasa hispida] >XP_038887746.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887747.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887748.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887749.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887750.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887751.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887752.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887753.1 protein RRP6-like 3 [Benincasa hispida] >XP_038887754.1 protein RRP6-like 3 [Benincasa hispida])
HSP 1 Score: 1648.3 bits (4267), Expect = 0.0e+00
Identity = 822/880 (93.41%), Postives = 850/880 (96.59%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHK+KIALVVASFAALTILFT +RRKRRSVR+SCYLRDDQKPQ AFK VLADNSYS
Sbjct: 1 MELQHKLKIALVVASFAALTILFTAGRRRKRRSVRTSCYLRDDQKPQYAFKCVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
FKHL+LN NKD DVNSHPYESEILSLLENS PEFDFISERTDLTLSDTYVWVETESQLE
Sbjct: 61 QFKHLKLNPNKDLDVNSHPYESEILSLLENSKPEFDFISERTDLTLSDTYVWVETESQLE 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
EL+DVLNKE VFAVDTEQHSLRSFLGFTALIQIST +EDYLVDTIALHDSM+LLRP+FAN
Sbjct: 121 ELLDVLNKETVFAVDTEQHSLRSFLGFTALIQISTPKEDYLVDTIALHDSMSLLRPIFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGV+TNKM
Sbjct: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPL ADMVQYARTDAHYLLYIANCLL ELKQVNEN+STDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLPADMVQYARTDAHYLLYIANCLLSELKQVNENTSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMAR 360
NMTCLQLYSKETEGSPGESAASSISSRHLNSQ GS L+SCKTQFQDHVRRLCAWRDLMAR
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQGGSMLVSCKTQFQDHVRRLCAWRDLMAR 360
Query: 361 VHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHLD 420
VHDE+LRYVLSDQAIVALANQVSKN GELYATI+QADLNVDL S L+LPSPSPVVCSHLD
Sbjct: 361 VHDENLRYVLSDQAIVALANQVSKNTGELYATIAQADLNVDLSSSLYLPSPSPVVCSHLD 420
Query: 421 DIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN- 480
DIH LLHDKSGDLD+IFL ILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISK +DRKN
Sbjct: 421 DIHCLLHDKSGDLDDIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKQSDRKNA 480
Query: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAEL+ADDP
Sbjct: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELIADDP 540
Query: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR
Sbjct: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
Query: 601 SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGTNVEE 660
SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGT+V+E
Sbjct: 601 SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGTDVQE 660
Query: 661 EGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPHE 720
EGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLE+ALLVGMSPHE
Sbjct: 661 EGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLEKALLVGMSPHE 720
Query: 721 RRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETCV 780
+RRLQKKKGLA KHSAQSVFP AEHQ+G CNIDTSTVVNSSVD NHMN+DSGSVSETC+
Sbjct: 721 KRRLQKKKGLALKHSAQSVFPAAEHQNGGCNIDTSTVVNSSVDVKNHMNADSGSVSETCL 780
Query: 781 PGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQVF 840
PGGEV+FSD+GYAKT QPKFN KLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQVF
Sbjct: 781 PGGEVSFSDDGYAKTVQPKFNPKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQVF 840
Query: 841 VAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
VAAIQPRFLPAGWDVNHSG+RDFGEFSLYNP KKAS ANE
Sbjct: 841 VAAIQPRFLPAGWDVNHSGKRDFGEFSLYNPIKKASLANE 880
BLAST of Clc02G02030 vs. NCBI nr
Match:
XP_008455438.1 (PREDICTED: protein RRP6-like 3 isoform X1 [Cucumis melo])
HSP 1 Score: 1641.3 bits (4249), Expect = 0.0e+00
Identity = 824/881 (93.53%), Postives = 843/881 (95.69%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHKVKIALVVASFAALTILFT R+RRKRRS +SCYLRDDQKPQ AFKRVLADNSYS
Sbjct: 1 MELQHKVKIALVVASFAALTILFTARRRRKRRSGSTSCYLRDDQKPQYAFKRVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
AFKHL+LNMNKD DVNSHPYESEILSLLENSSPE +FISERTDLTLSDTY WVETESQLE
Sbjct: 61 AFKHLKLNMNKDNDVNSHPYESEILSLLENSSPELNFISERTDLTLSDTYAWVETESQLE 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTH+EDYLVDTIALHDSMNLLRPVFAN
Sbjct: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLLRPVFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP KSLAYLLETYC V+TNKM
Sbjct: 181 RSICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPMKSLAYLLETYCRVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMAR 360
NMTCLQLYSKETEGSPGESAASSISSRHLNSQ GS LISCKTQFQD VRRLCAWRDLMAR
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMAR 360
Query: 361 VHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHLD 420
VHDESLRYVLSDQAI+A+A QV K+ GELYATI+QADLNVDL S FLPSPS VVCSHLD
Sbjct: 361 VHDESLRYVLSDQAILAIAIQVPKSTGELYATIAQADLNVDLSSSPFLPSPSSVVCSHLD 420
Query: 421 DIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN- 480
DIH LLHD GDLD FL ILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN
Sbjct: 421 DIHCLLHDNFGDLDRFFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNA 480
Query: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP
Sbjct: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
Query: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR
Sbjct: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
Query: 601 SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDM-AEPSDSGTNVE 660
SHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDM AEPSDS TNV
Sbjct: 601 SHDIVLLCVDCHETAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVH 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMP KRQEELML+VM+YYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPLKRQEELMLVVMKYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRR+QKKKGLAFKHS QSVFPDAEHQ+GACNIDTSTV NSSVD NNHMNSDSGSVS+TC
Sbjct: 721 ERRRVQKKKGLAFKHSPQSVFPDAEHQNGACNIDTSTVDNSSVDVNNHMNSDSGSVSDTC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
PGGEV+FSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVD+LL+EY EDGIRQFCQRWRQV
Sbjct: 781 GPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDYLLKEYHEDGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE
Sbjct: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 881
BLAST of Clc02G02030 vs. NCBI nr
Match:
XP_022135803.1 (protein RRP6-like 3 isoform X1 [Momordica charantia])
HSP 1 Score: 1592.0 bits (4121), Expect = 0.0e+00
Identity = 794/881 (90.12%), Postives = 833/881 (94.55%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLR-DDQKPQCAFKRVLADNSY 60
MEL+HKVKI L VASFAALTILFT R+RRK++SVRSSCYLR DDQK Q FKRVLADNSY
Sbjct: 1 MELKHKVKIVLAVASFAALTILFTARRRRKQKSVRSSCYLRGDDQKXQYTFKRVLADNSY 60
Query: 61 SAFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQL 120
S FKHL+LNMN D DVNSHPYESEILSLLENS PE+DF+SER D T SD YVWVETESQL
Sbjct: 61 SVFKHLKLNMNTDNDVNSHPYESEILSLLENSFPEYDFVSERKDFTSSDAYVWVETESQL 120
Query: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFA 180
EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQIST +EDYLVD IALHDSMNLLRP+FA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTRKEDYLVDAIALHDSMNLLRPIFA 180
Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNK 240
NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACE+LSKPQKSLAYLLETYCGV+TNK
Sbjct: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACELLSKPQKSLAYLLETYCGVATNK 240
Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRR 300
MLQREDWRQRPLSA+MVQYARTDAHYLL+IANCLL ELKQVNENSSTDDKFNF+LEASRR
Sbjct: 241 MLQREDWRQRPLSAEMVQYARTDAHYLLHIANCLLSELKQVNENSSTDDKFNFLLEASRR 300
Query: 301 SNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMA 360
SNM CLQLY+KETEGSPGESAASSISSR LNSQ ST+ISCKTQFQD VRRLCAWRDLMA
Sbjct: 301 SNMICLQLYAKETEGSPGESAASSISSRRLNSQGVSTIISCKTQFQDLVRRLCAWRDLMA 360
Query: 361 RVHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHL 420
RVHDESLRYVLSDQAIVALAN+V KN ELYATI+QADL+VDL LFLPSPSPVVCSHL
Sbjct: 361 RVHDESLRYVLSDQAIVALANKVPKNTMELYATIAQADLHVDLSPSLFLPSPSPVVCSHL 420
Query: 421 DDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN 480
DD+H LLHDKSGDLDNIFLVILQNCIGS+GSCPLSIFNYALLVKYNLKMMTISKHN RKN
Sbjct: 421 DDLHCLLHDKSGDLDNIFLVILQNCIGSDGSCPLSIFNYALLVKYNLKMMTISKHNHRKN 480
Query: 481 -KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADD 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWY+RRELAELV DD
Sbjct: 481 AKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYVRRELAELVDDD 540
Query: 541 PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH 600
PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH
Sbjct: 541 PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH 600
Query: 601 RSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGTNVE 660
RSHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAF++AEPSDSGTN +
Sbjct: 601 RSHDIVLLCVDCHEIAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFNLAEPSDSGTNFQ 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMPSKRQEELML VMRYYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLTVMRYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRRLQKK+G+A KHSAQS FP+AEHQ+GAC+IDTST VNSSVD N+H NSDSGSVS+ C
Sbjct: 721 ERRRLQKKRGIALKHSAQSNFPNAEHQNGACDIDTSTAVNSSVDINSHTNSDSGSVSDKC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
+PGG+V FSDNG A+TAQPKFN KLSLLGHGPHGK VVDHLLREYGE+GIRQFCQRWRQV
Sbjct: 781 LPGGQVGFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEEGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
FVAA +PRFLPAGWDVNHSGRRDFGEFS+YNP KKASP+NE
Sbjct: 841 FVAATKPRFLPAGWDVNHSGRRDFGEFSVYNPIKKASPSNE 881
BLAST of Clc02G02030 vs. NCBI nr
Match:
KAA0040242.1 (protein RRP6-like 3 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1579.3 bits (4088), Expect = 0.0e+00
Identity = 804/907 (88.64%), Postives = 831/907 (91.62%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHKVKIALVVASFAALTILFT R+RRKRRS +SCYLRDDQKPQ AFKRVLADNSYS
Sbjct: 1 MELQHKVKIALVVASFAALTILFTARRRRKRRSGSTSCYLRDDQKPQYAFKRVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
AFKHL+LNMNKD DVNSHPYESEILSLLENSSPE +FISERTDLTLSDTY WVETESQL+
Sbjct: 61 AFKHLKLNMNKDNDVNSHPYESEILSLLENSSPELNFISERTDLTLSDTYAWVETESQLK 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTH+EDYLVDTIALHDSMNLLRPVFAN
Sbjct: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLLRPVFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP KSLAYLLETYC V+TNKM
Sbjct: 181 RSICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPMKSLAYLLETYCRVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKT------------------ 360
NMTCLQLYSKETEGSPGESAASSISSRHLNSQ GS LISCKT
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQGGSALISCKTQVSCPPDDFDGVTFEAVS 360
Query: 361 --------QFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVALANQVSKNKGELYATIS 420
QFQD VRRLCAWRDLMARVHDESLRYVLSDQAI+A+A QV K+ GELYATI+
Sbjct: 361 YTNLCFLIQFQDRVRRLCAWRDLMARVHDESLRYVLSDQAILAIAIQVPKSTGELYATIA 420
Query: 421 QADLNVDLGSRLFLPSPSPVVCSHLDDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLS 480
QADLNVDL S FLPSPS VVCSHLDDIH LLH+ GDLD FL ILQNCIGSNGSCPLS
Sbjct: 421 QADLNVDLSSSPFLPSPSSVVCSHLDDIHCLLHNNFGDLDKFFLGILQNCIGSNGSCPLS 480
Query: 481 IFNYALLVKYNLKMMTISKHNDRKN-KQISKKASRELFVQKFSCKSPVYHNCRIYANDGR 540
IFNYALLVKYNLKMMTISKHNDRKN KQISKKASRELFVQKFSCKSPVYHNCRIYANDGR
Sbjct: 481 IFNYALLVKYNLKMMTISKHNDRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGR 540
Query: 541 LLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGE 600
LLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGE
Sbjct: 541 LLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGE 600
Query: 601 GNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPL 660
GNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPL
Sbjct: 601 GNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHETAHAAAEKHKRELAAEFGIPL 660
Query: 661 FVRRVVDTKEAFDM-AEPSDSGTNVEEEGVSPLELRTAAMALLRHGPRMPSKRQEELMLI 720
FVRRVVDTKEAFDM AEPSDS TNV EEGVSPLELRTAAMALLRHGPRMP KRQEELML+
Sbjct: 661 FVRRVVDTKEAFDMAAEPSDSETNVHEEGVSPLELRTAAMALLRHGPRMPLKRQEELMLV 720
Query: 721 VMRYYGRREISEEDLERALLVGMSPHERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNID 780
VM+YYGRREISEEDLERALLVGMSPHERRR+QKKKGLAFKHS QSVFPDAEHQ+GACNID
Sbjct: 721 VMKYYGRREISEEDLERALLVGMSPHERRRVQKKKGLAFKHSPQSVFPDAEHQNGACNID 780
Query: 781 TSTVVNSSVDANNHMNSDSGSVSETCVPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHG 840
TSTV NSSVD NNHMNSDSGSVS+TC PGGEV+FSDNGYAKTAQPKFNSKLSLLGHGPHG
Sbjct: 781 TSTVDNSSVDVNNHMNSDSGSVSDTCGPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGPHG 840
Query: 841 KLVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKK 880
KLVVD+LL+EY EDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNH +++ SL +
Sbjct: 841 KLVVDYLLKEYHEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHRPNKEW--ISLICVRL 900
BLAST of Clc02G02030 vs. ExPASy Swiss-Prot
Match:
A9LLI8 (Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1)
HSP 1 Score: 1117.4 bits (2889), Expect = 0.0e+00
Identity = 571/898 (63.59%), Postives = 697/898 (77.62%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTT-----RQRRKRRSVRSSCYLRDDQKPQCAFKRVLA 60
MEL+ K K+ + VAS A+TILF T RQRRK+ S SSCYL + KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 61 DNSYSAFKHLEL----NMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYV 120
DNSYS FKHL+L + + +K N HPYE+EI LLEN EF F+ L +SD+YV
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 121 WVETESQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSM 180
WVETESQL+EL ++L KE VFAVDTEQHSLRSFLGFTALIQISTHEED+LVDTIALHD M
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 181 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 240
++LRPVF++ ICKVFHGADND++WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 241 YCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQV--NENSSTDDK 300
CGV+TNK+LQREDWRQRPLS +MV+YARTDAHYLLYIA+ L ELKQ+ ++SS DD+
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATEDSSSPDDR 300
Query: 301 FNFILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVR 360
F+F+LEASRRSNMTCLQLY+KETE PG +A+SSI RHLN + IS ++ VR
Sbjct: 301 FHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNA--EELVR 360
Query: 361 RLCAWRDLMARVHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRL--F 420
+LCAWRDLM R+HDES RYVLSDQAIV L+ + E+Y TI+ DL + L
Sbjct: 361 KLCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSS 420
Query: 421 LPSPSPVVCSHLDDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLK 480
+ SP PV+CSHLDDI+ ++ DK LD++ V+L+ C+G+NG+CP+S+FNY+LLV + K
Sbjct: 421 VQSPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTK 480
Query: 481 MMTIS--KHNDRKN--KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKL 540
+ + S K N KN +Q ++KASRELFV+KFSCK+PVYHNCRIYANDGRLLCYCD+RKL
Sbjct: 481 LSSHSAPKQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKL 540
Query: 541 EWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRII 600
EWYL R LA+LV ++PPAI LLFEPKGRPEDEGNDFYIQ+K+NICVGCGEG HYLRYRII
Sbjct: 541 EWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRII 600
Query: 601 PSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKE 660
PSCYR+HFPEHLKSHRSHDIVLLCVDCHE AHAAAE++K+++A EFGIPLFVRRV+D+KE
Sbjct: 601 PSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKE 660
Query: 661 A---FDMAEPSDSGTNVEEEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRR 720
A + E +G + E+ GVSPL LR+AAMALLRHG RMPS R+EEL+ V YYG R
Sbjct: 661 AQGTSSLVEDESTGDS-EDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGR 720
Query: 721 EISEEDLERALLVGMSPHERRRLQKKKGLAFKHSAQSVFPDA---EHQHGACNIDTSTVV 780
++SEEDLE+ALL+G+SPHERR+L++KKG++FKHSA+ D E+ G D ++
Sbjct: 721 DLSEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQEDENNDGEALADFEKIM 780
Query: 781 NSSVDANNHMNSDSGSVSETCVPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVD 840
+V+ + ++ SE G +D + NSKLSLLGHGPHGK +V+
Sbjct: 781 --TVERSTVVDDSGDGTSE---GDGAKELNDTQCNGNTLHQQNSKLSLLGHGPHGKQIVE 840
Query: 841 HLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKAS 876
+LLRE+GEDG+R FCQRWR+VFV A+ PR LP GW+V+HSGRRDFGEFS+YNP K+ S
Sbjct: 841 YLLREHGEDGVRDFCQRWRKVFVDAVHPRHLPGGWNVSHSGRRDFGEFSVYNPTKRLS 890
BLAST of Clc02G02030 vs. ExPASy Swiss-Prot
Match:
A9LLI7 (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 1.1e-50
Identity = 135/382 (35.34%), Postives = 203/382 (53.14%), Query Frame = 0
Query: 10 ALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYSAFKHLELNM 69
A V + + + R + + ++ +KPQ + +L +N+ F+H+ L
Sbjct: 162 AAVNGGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEY-NILVNNANLPFEHVWLER 221
Query: 70 NKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDT-YVWVETESQLEELVDVLNK 129
++D HP E S+L+ + + + L L T + +V+ L+ELV L
Sbjct: 222 SEDDLRAMHPLEK--FSVLDFVDKDVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRS 281
Query: 130 EMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMN-LLRPVFANSRICKVF 189
FAVD E + RSF G T L+QIST EDY+VDT L + LR +F + + KV
Sbjct: 282 VEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVM 341
Query: 190 HGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKMLQREDWR 249
HGAD DI+WLQRDF IYV NLFDT +A VL+ + SL +LL+ +CGV+ NK Q DWR
Sbjct: 342 HGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERNSLEFLLQHFCGVTANKEYQNADWR 401
Query: 250 QRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRSNMTCLQL 309
RPL +M +YAR D HYLLYI + + EL+++ ++ + D + +LE +RS C QL
Sbjct: 402 IRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKDDAHTD--SPLLEVYKRSYDVCTQL 461
Query: 310 YSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMARVHDESLR 369
Y KE + S H+ + + + V LC WRD +AR DES
Sbjct: 462 YEKE--------LLTENSYLHVYGLQAAGFNAAQLAI---VAGLCEWRDFIARAEDESTG 521
Query: 370 YVLSDQAIVALANQVSKNKGEL 390
YVL ++ ++ +A ++ + G+L
Sbjct: 522 YVLPNKVLLEIAKEMPDSVGKL 527
BLAST of Clc02G02030 vs. ExPASy Swiss-Prot
Match:
Q0WVE8 (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)
HSP 1 Score: 201.4 bits (511), Expect = 4.1e-50
Identity = 132/340 (38.82%), Postives = 183/340 (53.82%), Query Frame = 0
Query: 45 KPQCAFKRVLADNSYSAFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDL 104
KPQ +K +L DN+ + F+H+ L ++D HP E LS+++ + L
Sbjct: 52 KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLEE--LSVMDFVDRNLSEMRPVKPL 111
Query: 105 TLSDT-YVWVETESQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVD 164
L +T + VE LE+L L FAVD E + R+F G T L+QIST EDY+VD
Sbjct: 112 PLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTRTEDYIVD 171
Query: 165 TIALHDSMN-LLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQ 224
L D + LR +F + + KV HGAD DI+WLQRDF IYV NLFDT +A VL +
Sbjct: 172 IFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLER 231
Query: 225 KSLAYLLETYCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNE 284
SL +LL+ YCGV+ NK Q+ DWR RPL M +YAR D HYLLYI + + EL + +
Sbjct: 232 NSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRMELHTMAK 291
Query: 285 NSSTDDKFNFILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKT 344
D + ++E +RS C+QLY KE + + +LN+ S
Sbjct: 292 EDEQSD--SPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQLSI------ 351
Query: 345 QFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVALANQV 383
V LC WRD +AR DES YVL ++ + +A ++
Sbjct: 352 -----VAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEM 375
BLAST of Clc02G02030 vs. ExPASy Swiss-Prot
Match:
Q10146 (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)
HSP 1 Score: 194.1 bits (492), Expect = 6.5e-48
Identity = 126/322 (39.13%), Postives = 174/322 (54.04%), Query Frame = 0
Query: 78 HPYESEILSLLENS--SPEFDFISERTDLTLSDTY--VWVETESQLEELVDVLNKEMVFA 137
HPYE EI +NS P +S D D +WV TESQL +++ L A
Sbjct: 186 HPYEPEI----QNSVYPPWVSEMSNPIDTGSVDETEPIWVSTESQLSDMLKELQNSKEIA 245
Query: 138 VDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFANSRICKVFHGADND 197
VD E H RSF GF L+QIS E+D++VDT+ L + + L VF N I KVFHGA D
Sbjct: 246 VDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREELEALNVVFTNPNIIKVFHGATMD 305
Query: 198 ILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKMLQREDWRQRPLSA 257
I+WLQRDF +YVVNLFDT A +VL LA+LL+ YC +K Q DWR RPL
Sbjct: 306 IIWLQRDFGLYVVNLFDTYYATKVLGFEGHGLAFLLQKYCDYDADKRYQMADWRIRPLPR 365
Query: 258 DMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRSNMTCLQLYSKETE 317
+M++YA++D HYLLYI + L EL + S + K N + S L+ Y E E
Sbjct: 366 EMLKYAQSDTHYLLYIWDHLRNEL----ISKSAERKENLMQSVFNSSKQISLRKY--ELE 425
Query: 318 GSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQ 377
+ R++ ++ GS+ I + + R L WRD +AR DES+RYVL ++
Sbjct: 426 PYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIY-RALHDWRDSVARKEDESVRYVLPNR 485
Query: 378 AIVALANQVSKNKGELYATISQ 396
++A+A ++++ Q
Sbjct: 486 LLIAIAASKPVEAADVFSISKQ 496
BLAST of Clc02G02030 vs. ExPASy Swiss-Prot
Match:
P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)
HSP 1 Score: 191.0 bits (484), Expect = 5.5e-47
Identity = 127/333 (38.14%), Postives = 176/333 (52.85%), Query Frame = 0
Query: 62 FKHLELNMNKDKDVNSHPYESEI------LSLLENSSPEFDFISERTDLTLSDTYVWVET 121
F H + ++D+ +HPY+ E+ S+L+ P+ T L
Sbjct: 240 FIHQQRTQQVEQDMFAHPYQYELDHFTPPQSVLQRPKPQLYRAVGETPCHL--------- 299
Query: 122 ESQLEELVDVLNKEMV----FAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSM 181
S L+ELV+ LN++++ FAVD E HS RSFLG T L+QIST ED++VDT+ L M
Sbjct: 300 VSSLDELVE-LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDM 359
Query: 182 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 241
+L + I KVFHGAD+DI WLQ+DF +YVVN+FDT +A +L+ + SL +LL
Sbjct: 360 YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRL 419
Query: 242 YCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFN 301
YCGV +NK Q DWR RPL +M+ YAR D HYLLYI + + EL + +
Sbjct: 420 YCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPVQ---- 479
Query: 302 FILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRL 361
+ +RS CL+ + K +HLNSQ T FQ L
Sbjct: 480 -LQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQ-------QLTAFQ----LL 539
Query: 362 CAWRDLMARVHDESLRYVLSDQAIVALANQVSK 385
AWRD AR DES YVL + ++ +A ++ K
Sbjct: 540 FAWRDKTARREDESYGYVLPNHMMLKIAEELPK 546
BLAST of Clc02G02030 vs. ExPASy TrEMBL
Match:
A0A0A0K254 (HRDC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G043600 PE=4 SV=1)
HSP 1 Score: 1650.2 bits (4272), Expect = 0.0e+00
Identity = 827/881 (93.87%), Postives = 847/881 (96.14%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHK+KIALVVASFAALTILFT R+RRKRRSV +SCYLRDDQKPQ AFKRVLADNSYS
Sbjct: 1 MELQHKLKIALVVASFAALTILFTARRRRKRRSVSTSCYLRDDQKPQYAFKRVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
AFKHL+LNMNKD DVNSHPYESEILSLLENSSPEF+FISERTDLTLSDTY WVET SQLE
Sbjct: 61 AFKHLKLNMNKDNDVNSHPYESEILSLLENSSPEFNFISERTDLTLSDTYAWVETVSQLE 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTH+EDYLVDTIALHDSMNLLRPVFAN
Sbjct: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLLRPVFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGV+TNKM
Sbjct: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPL ADMVQYARTDAHYLLYIANCLL ELKQVNENSSTDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLPADMVQYARTDAHYLLYIANCLLVELKQVNENSSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMAR 360
NMTCLQLYSKETEGSPGESAASSI SRHLNSQ GS LISCKTQFQD VRRLCAWRDLMAR
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSIWSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMAR 360
Query: 361 VHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHLD 420
VHDESLRYVLSDQAIVA+A QV KN GELYATI+Q DLNVDL S LFLPSPS VVCSHLD
Sbjct: 361 VHDESLRYVLSDQAIVAIAIQVPKNTGELYATIAQVDLNVDLSSSLFLPSPSSVVCSHLD 420
Query: 421 DIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN- 480
DIH LLHD GDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN
Sbjct: 421 DIHCLLHDNFGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNA 480
Query: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP
Sbjct: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
Query: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYR+HFPEHLKSHR
Sbjct: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHR 600
Query: 601 SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDM-AEPSDSGTNVE 660
SHDIVLLCVDCHE AHAAAEK+KRELAAEFGIPLFVRRVVDTKEAFDM AEPSDS TNV+
Sbjct: 601 SHDIVLLCVDCHETAHAAAEKYKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVQ 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMP KRQEELM +VM+YYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPLKRQEELMFVVMKYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRRLQKKKGLAFKHS QSVFPDAE Q+GACNIDTSTV +SSVD NNHMNSDSGSVSETC
Sbjct: 721 ERRRLQKKKGLAFKHSPQSVFPDAERQNGACNIDTSTVDSSSVDVNNHMNSDSGSVSETC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
VPGGEV+FSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVD+LL+EYGEDGIRQFCQRWRQV
Sbjct: 781 VPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDYLLKEYGEDGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKA P NE
Sbjct: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKAFPDNE 881
BLAST of Clc02G02030 vs. ExPASy TrEMBL
Match:
A0A1S3C120 (protein RRP6-like 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495596 PE=4 SV=1)
HSP 1 Score: 1641.3 bits (4249), Expect = 0.0e+00
Identity = 824/881 (93.53%), Postives = 843/881 (95.69%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHKVKIALVVASFAALTILFT R+RRKRRS +SCYLRDDQKPQ AFKRVLADNSYS
Sbjct: 1 MELQHKVKIALVVASFAALTILFTARRRRKRRSGSTSCYLRDDQKPQYAFKRVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
AFKHL+LNMNKD DVNSHPYESEILSLLENSSPE +FISERTDLTLSDTY WVETESQLE
Sbjct: 61 AFKHLKLNMNKDNDVNSHPYESEILSLLENSSPELNFISERTDLTLSDTYAWVETESQLE 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTH+EDYLVDTIALHDSMNLLRPVFAN
Sbjct: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLLRPVFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP KSLAYLLETYC V+TNKM
Sbjct: 181 RSICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPMKSLAYLLETYCRVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMAR 360
NMTCLQLYSKETEGSPGESAASSISSRHLNSQ GS LISCKTQFQD VRRLCAWRDLMAR
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMAR 360
Query: 361 VHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHLD 420
VHDESLRYVLSDQAI+A+A QV K+ GELYATI+QADLNVDL S FLPSPS VVCSHLD
Sbjct: 361 VHDESLRYVLSDQAILAIAIQVPKSTGELYATIAQADLNVDLSSSPFLPSPSSVVCSHLD 420
Query: 421 DIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN- 480
DIH LLHD GDLD FL ILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN
Sbjct: 421 DIHCLLHDNFGDLDRFFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNA 480
Query: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP
Sbjct: 481 KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDP 540
Query: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR
Sbjct: 541 PAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHR 600
Query: 601 SHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDM-AEPSDSGTNVE 660
SHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDM AEPSDS TNV
Sbjct: 601 SHDIVLLCVDCHETAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVH 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMP KRQEELML+VM+YYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPLKRQEELMLVVMKYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRR+QKKKGLAFKHS QSVFPDAEHQ+GACNIDTSTV NSSVD NNHMNSDSGSVS+TC
Sbjct: 721 ERRRVQKKKGLAFKHSPQSVFPDAEHQNGACNIDTSTVDNSSVDVNNHMNSDSGSVSDTC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
PGGEV+FSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVD+LL+EY EDGIRQFCQRWRQV
Sbjct: 781 GPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDYLLKEYHEDGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE
Sbjct: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 881
BLAST of Clc02G02030 vs. ExPASy TrEMBL
Match:
A0A6J1C5X3 (protein RRP6-like 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007668 PE=4 SV=1)
HSP 1 Score: 1592.0 bits (4121), Expect = 0.0e+00
Identity = 794/881 (90.12%), Postives = 833/881 (94.55%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLR-DDQKPQCAFKRVLADNSY 60
MEL+HKVKI L VASFAALTILFT R+RRK++SVRSSCYLR DDQK Q FKRVLADNSY
Sbjct: 1 MELKHKVKIVLAVASFAALTILFTARRRRKQKSVRSSCYLRGDDQKXQYTFKRVLADNSY 60
Query: 61 SAFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQL 120
S FKHL+LNMN D DVNSHPYESEILSLLENS PE+DF+SER D T SD YVWVETESQL
Sbjct: 61 SVFKHLKLNMNTDNDVNSHPYESEILSLLENSFPEYDFVSERKDFTSSDAYVWVETESQL 120
Query: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFA 180
EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQIST +EDYLVD IALHDSMNLLRP+FA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTRKEDYLVDAIALHDSMNLLRPIFA 180
Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNK 240
NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACE+LSKPQKSLAYLLETYCGV+TNK
Sbjct: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACELLSKPQKSLAYLLETYCGVATNK 240
Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRR 300
MLQREDWRQRPLSA+MVQYARTDAHYLL+IANCLL ELKQVNENSSTDDKFNF+LEASRR
Sbjct: 241 MLQREDWRQRPLSAEMVQYARTDAHYLLHIANCLLSELKQVNENSSTDDKFNFLLEASRR 300
Query: 301 SNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMA 360
SNM CLQLY+KETEGSPGESAASSISSR LNSQ ST+ISCKTQFQD VRRLCAWRDLMA
Sbjct: 301 SNMICLQLYAKETEGSPGESAASSISSRRLNSQGVSTIISCKTQFQDLVRRLCAWRDLMA 360
Query: 361 RVHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHL 420
RVHDESLRYVLSDQAIVALAN+V KN ELYATI+QADL+VDL LFLPSPSPVVCSHL
Sbjct: 361 RVHDESLRYVLSDQAIVALANKVPKNTMELYATIAQADLHVDLSPSLFLPSPSPVVCSHL 420
Query: 421 DDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN 480
DD+H LLHDKSGDLDNIFLVILQNCIGS+GSCPLSIFNYALLVKYNLKMMTISKHN RKN
Sbjct: 421 DDLHCLLHDKSGDLDNIFLVILQNCIGSDGSCPLSIFNYALLVKYNLKMMTISKHNHRKN 480
Query: 481 -KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADD 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWY+RRELAELV DD
Sbjct: 481 AKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYVRRELAELVDDD 540
Query: 541 PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH 600
PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH
Sbjct: 541 PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH 600
Query: 601 RSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGTNVE 660
RSHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAF++AEPSDSGTN +
Sbjct: 601 RSHDIVLLCVDCHEIAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFNLAEPSDSGTNFQ 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMPSKRQEELML VMRYYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLTVMRYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRRLQKK+G+A KHSAQS FP+AEHQ+GAC+IDTST VNSSVD N+H NSDSGSVS+ C
Sbjct: 721 ERRRLQKKRGIALKHSAQSNFPNAEHQNGACDIDTSTAVNSSVDINSHTNSDSGSVSDKC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
+PGG+V FSDNG A+TAQPKFN KLSLLGHGPHGK VVDHLLREYGE+GIRQFCQRWRQV
Sbjct: 781 LPGGQVGFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEEGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKASPANE 880
FVAA +PRFLPAGWDVNHSGRRDFGEFS+YNP KKASP+NE
Sbjct: 841 FVAATKPRFLPAGWDVNHSGRRDFGEFSVYNPIKKASPSNE 881
BLAST of Clc02G02030 vs. ExPASy TrEMBL
Match:
A0A5A7T9W4 (Protein RRP6-like 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold888G00270 PE=4 SV=1)
HSP 1 Score: 1579.3 bits (4088), Expect = 0.0e+00
Identity = 804/907 (88.64%), Postives = 831/907 (91.62%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYS 60
MELQHKVKIALVVASFAALTILFT R+RRKRRS +SCYLRDDQKPQ AFKRVLADNSYS
Sbjct: 1 MELQHKVKIALVVASFAALTILFTARRRRKRRSGSTSCYLRDDQKPQYAFKRVLADNSYS 60
Query: 61 AFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQLE 120
AFKHL+LNMNKD DVNSHPYESEILSLLENSSPE +FISERTDLTLSDTY WVETESQL+
Sbjct: 61 AFKHLKLNMNKDNDVNSHPYESEILSLLENSSPELNFISERTDLTLSDTYAWVETESQLK 120
Query: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFAN 180
ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTH+EDYLVDTIALHDSMNLLRPVFAN
Sbjct: 121 ELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLLRPVFAN 180
Query: 181 SRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKM 240
ICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKP KSLAYLLETYC V+TNKM
Sbjct: 181 RSICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPMKSLAYLLETYCRVATNKM 240
Query: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRS 300
LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNF+LEASRRS
Sbjct: 241 LQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFLLEASRRS 300
Query: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKT------------------ 360
NMTCLQLYSKETEGSPGESAASSISSRHLNSQ GS LISCKT
Sbjct: 301 NMTCLQLYSKETEGSPGESAASSISSRHLNSQGGSALISCKTQVSCPPDDFDGVTFEAVS 360
Query: 361 --------QFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVALANQVSKNKGELYATIS 420
QFQD VRRLCAWRDLMARVHDESLRYVLSDQAI+A+A QV K+ GELYATI+
Sbjct: 361 YTNLCFLIQFQDRVRRLCAWRDLMARVHDESLRYVLSDQAILAIAIQVPKSTGELYATIA 420
Query: 421 QADLNVDLGSRLFLPSPSPVVCSHLDDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLS 480
QADLNVDL S FLPSPS VVCSHLDDIH LLH+ GDLD FL ILQNCIGSNGSCPLS
Sbjct: 421 QADLNVDLSSSPFLPSPSSVVCSHLDDIHCLLHNNFGDLDKFFLGILQNCIGSNGSCPLS 480
Query: 481 IFNYALLVKYNLKMMTISKHNDRKN-KQISKKASRELFVQKFSCKSPVYHNCRIYANDGR 540
IFNYALLVKYNLKMMTISKHNDRKN KQISKKASRELFVQKFSCKSPVYHNCRIYANDGR
Sbjct: 481 IFNYALLVKYNLKMMTISKHNDRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGR 540
Query: 541 LLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGE 600
LLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGE
Sbjct: 541 LLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGE 600
Query: 601 GNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPL 660
GNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPL
Sbjct: 601 GNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHETAHAAAEKHKRELAAEFGIPL 660
Query: 661 FVRRVVDTKEAFDM-AEPSDSGTNVEEEGVSPLELRTAAMALLRHGPRMPSKRQEELMLI 720
FVRRVVDTKEAFDM AEPSDS TNV EEGVSPLELRTAAMALLRHGPRMP KRQEELML+
Sbjct: 661 FVRRVVDTKEAFDMAAEPSDSETNVHEEGVSPLELRTAAMALLRHGPRMPLKRQEELMLV 720
Query: 721 VMRYYGRREISEEDLERALLVGMSPHERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNID 780
VM+YYGRREISEEDLERALLVGMSPHERRR+QKKKGLAFKHS QSVFPDAEHQ+GACNID
Sbjct: 721 VMKYYGRREISEEDLERALLVGMSPHERRRVQKKKGLAFKHSPQSVFPDAEHQNGACNID 780
Query: 781 TSTVVNSSVDANNHMNSDSGSVSETCVPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHG 840
TSTV NSSVD NNHMNSDSGSVS+TC PGGEV+FSDNGYAKTAQPKFNSKLSLLGHGPHG
Sbjct: 781 TSTVDNSSVDVNNHMNSDSGSVSDTCGPGGEVSFSDNGYAKTAQPKFNSKLSLLGHGPHG 840
Query: 841 KLVVDHLLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKK 880
KLVVD+LL+EY EDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNH +++ SL +
Sbjct: 841 KLVVDYLLKEYHEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHRPNKEW--ISLICVRL 900
BLAST of Clc02G02030 vs. ExPASy TrEMBL
Match:
A0A6J1C2I3 (protein RRP6-like 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007668 PE=4 SV=1)
HSP 1 Score: 1550.4 bits (4013), Expect = 0.0e+00
Identity = 774/858 (90.21%), Postives = 811/858 (94.52%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTTRQRRKRRSVRSSCYLR-DDQKPQCAFKRVLADNSY 60
MEL+HKVKI L VASFAALTILFT R+RRK++SVRSSCYLR DDQK Q FKRVLADNSY
Sbjct: 1 MELKHKVKIVLAVASFAALTILFTARRRRKQKSVRSSCYLRGDDQKXQYTFKRVLADNSY 60
Query: 61 SAFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYVWVETESQL 120
S FKHL+LNMN D DVNSHPYESEILSLLENS PE+DF+SER D T SD YVWVETESQL
Sbjct: 61 SVFKHLKLNMNTDNDVNSHPYESEILSLLENSFPEYDFVSERKDFTSSDAYVWVETESQL 120
Query: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMNLLRPVFA 180
EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQIST +EDYLVD IALHDSMNLLRP+FA
Sbjct: 121 EELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTRKEDYLVDAIALHDSMNLLRPIFA 180
Query: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNK 240
NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACE+LSKPQKSLAYLLETYCGV+TNK
Sbjct: 181 NSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACELLSKPQKSLAYLLETYCGVATNK 240
Query: 241 MLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRR 300
MLQREDWRQRPLSA+MVQYARTDAHYLL+IANCLL ELKQVNENSSTDDKFNF+LEASRR
Sbjct: 241 MLQREDWRQRPLSAEMVQYARTDAHYLLHIANCLLSELKQVNENSSTDDKFNFLLEASRR 300
Query: 301 SNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMA 360
SNM CLQLY+KETEGSPGESAASSISSR LNSQ ST+ISCKTQFQD VRRLCAWRDLMA
Sbjct: 301 SNMICLQLYAKETEGSPGESAASSISSRRLNSQGVSTIISCKTQFQDLVRRLCAWRDLMA 360
Query: 361 RVHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRLFLPSPSPVVCSHL 420
RVHDESLRYVLSDQAIVALAN+V KN ELYATI+QADL+VDL LFLPSPSPVVCSHL
Sbjct: 361 RVHDESLRYVLSDQAIVALANKVPKNTMELYATIAQADLHVDLSPSLFLPSPSPVVCSHL 420
Query: 421 DDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKN 480
DD+H LLHDKSGDLDNIFLVILQNCIGS+GSCPLSIFNYALLVKYNLKMMTISKHN RKN
Sbjct: 421 DDLHCLLHDKSGDLDNIFLVILQNCIGSDGSCPLSIFNYALLVKYNLKMMTISKHNHRKN 480
Query: 481 -KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADD 540
KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWY+RRELAELV DD
Sbjct: 481 AKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYVRRELAELVDDD 540
Query: 541 PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH 600
PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH
Sbjct: 541 PPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSH 600
Query: 601 RSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAEPSDSGTNVE 660
RSHDIVLLCVDCHE AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAF++AEPSDSGTN +
Sbjct: 601 RSHDIVLLCVDCHEIAHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFNLAEPSDSGTNFQ 660
Query: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRREISEEDLERALLVGMSPH 720
EEGVSPLELRTAAMALLRHGPRMPSKRQEELML VMRYYGRREISEEDLERALLVGMSPH
Sbjct: 661 EEGVSPLELRTAAMALLRHGPRMPSKRQEELMLTVMRYYGRREISEEDLERALLVGMSPH 720
Query: 721 ERRRLQKKKGLAFKHSAQSVFPDAEHQHGACNIDTSTVVNSSVDANNHMNSDSGSVSETC 780
ERRRLQKK+G+A KHSAQS FP+AEHQ+GAC+IDTST VNSSVD N+H NSDSGSVS+ C
Sbjct: 721 ERRRLQKKRGIALKHSAQSNFPNAEHQNGACDIDTSTAVNSSVDINSHTNSDSGSVSDKC 780
Query: 781 VPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDHLLREYGEDGIRQFCQRWRQV 840
+PGG+V FSDNG A+TAQPKFN KLSLLGHGPHGK VVDHLLREYGE+GIRQFCQRWRQV
Sbjct: 781 LPGGQVGFSDNGSARTAQPKFNPKLSLLGHGPHGKQVVDHLLREYGEEGIRQFCQRWRQV 840
Query: 841 FVAAIQPRFLPAGWDVNH 857
FVAA +PRFLPAGWDVNH
Sbjct: 841 FVAATKPRFLPAGWDVNH 858
BLAST of Clc02G02030 vs. TAIR 10
Match:
AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 571/897 (63.66%), Postives = 697/897 (77.70%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTT-----RQRRKRRSVRSSCYLRDDQKPQCAFKRVLA 60
MEL+ K K+ + VAS A+TILF T RQRRK+ S SSCYL + KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 61 DNSYSAFKHLEL----NMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYV 120
DNSYS FKHL+L + + +K N HPYE+EI LLEN EF F+ L +SD+YV
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 121 WVETESQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSM 180
WVETESQL+EL ++L KE VFAVDTEQHSLRSFLGFTALIQISTHEED+LVDTIALHD M
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 181 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 240
++LRPVF++ ICKVFHGADND++WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 241 YCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQV-NENSSTDDKF 300
CGV+TNK+LQREDWRQRPLS +MV+YARTDAHYLLYIA+ L ELKQ+ ++SS DD+F
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATDSSSPDDRF 300
Query: 301 NFILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRR 360
+F+LEASRRSNMTCLQLY+KETE PG +A+SSI RHLN + IS ++ VR+
Sbjct: 301 HFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNA--EELVRK 360
Query: 361 LCAWRDLMARVHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRL--FL 420
LCAWRDLM R+HDES RYVLSDQAIV L+ + E+Y TI+ DL + L +
Sbjct: 361 LCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSV 420
Query: 421 PSPSPVVCSHLDDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKM 480
SP PV+CSHLDDI+ ++ DK LD++ V+L+ C+G+NG+CP+S+FNY+LLV + K+
Sbjct: 421 QSPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKL 480
Query: 481 MTIS--KHNDRKN--KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLE 540
+ S K N KN +Q ++KASRELFV+KFSCK+PVYHNCRIYANDGRLLCYCD+RKLE
Sbjct: 481 SSHSAPKQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKLE 540
Query: 541 WYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIP 600
WYL R LA+LV ++PPAI LLFEPKGRPEDEGNDFYIQ+K+NICVGCGEG HYLRYRIIP
Sbjct: 541 WYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRIIP 600
Query: 601 SCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEA 660
SCYR+HFPEHLKSHRSHDIVLLCVDCHE AHAAAE++K+++A EFGIPLFVRRV+D+KEA
Sbjct: 601 SCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKEA 660
Query: 661 ---FDMAEPSDSGTNVEEEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRRE 720
+ E +G + E+ GVSPL LR+AAMALLRHG RMPS R+EEL+ V YYG R+
Sbjct: 661 QGTSSLVEDESTGDS-EDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGRD 720
Query: 721 ISEEDLERALLVGMSPHERRRLQKKKGLAFKHSAQSVFPDA---EHQHGACNIDTSTVVN 780
+SEEDLE+ALL+G+SPHERR+L++KKG++FKHSA+ D E+ G D ++
Sbjct: 721 LSEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQEDENNDGEALADFEKIM- 780
Query: 781 SSVDANNHMNSDSGSVSETCVPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDH 840
+V+ + ++ SE G +D + NSKLSLLGHGPHGK +V++
Sbjct: 781 -TVERSTVVDDSGDGTSE---GDGAKELNDTQCNGNTLHQQNSKLSLLGHGPHGKQIVEY 840
Query: 841 LLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSLYNPKKKAS 876
LLRE+GEDG+R FCQRWR+VFV A+ PR LP GW+V+HSGRRDFGEFS+YNP K+ S
Sbjct: 841 LLREHGEDGVRDFCQRWRKVFVDAVHPRHLPGGWNVSHSGRRDFGEFSVYNPTKRLS 889
BLAST of Clc02G02030 vs. TAIR 10
Match:
AT2G32415.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 556/878 (63.33%), Postives = 680/878 (77.45%), Query Frame = 0
Query: 1 MELQHKVKIALVVASFAALTILFTT-----RQRRKRRSVRSSCYLRDDQKPQCAFKRVLA 60
MEL+ K K+ + VAS A+TILF T RQRRK+ S SSCYL + KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 61 DNSYSAFKHLEL----NMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDTYV 120
DNSYS FKHL+L + + +K N HPYE+EI LLEN EF F+ L +SD+YV
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 121 WVETESQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSM 180
WVETESQL+EL ++L KE VFAVDTEQHSLRSFLGFTALIQISTHEED+LVDTIALHD M
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 181 NLLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 240
++LRPVF++ ICKVFHGADND++WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 241 YCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQV-NENSSTDDKF 300
CGV+TNK+LQREDWRQRPLS +MV+YARTDAHYLLYIA+ L ELKQ+ ++SS DD+F
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATDSSSPDDRF 300
Query: 301 NFILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRR 360
+F+LEASRRSNMTCLQLY+KETE PG +A+SSI RHLN + IS ++ VR+
Sbjct: 301 HFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNA--EELVRK 360
Query: 361 LCAWRDLMARVHDESLRYVLSDQAIVALANQVSKNKGELYATISQADLNVDLGSRL--FL 420
LCAWRDLM R+HDES RYVLSDQAIV L+ + E+Y TI+ DL + L +
Sbjct: 361 LCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSV 420
Query: 421 PSPSPVVCSHLDDIHHLLHDKSGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKM 480
SP PV+CSHLDDI+ ++ DK LD++ V+L+ C+G+NG+CP+S+FNY+LLV + K+
Sbjct: 421 QSPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKL 480
Query: 481 MTIS--KHNDRKN--KQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLE 540
+ S K N KN +Q ++KASRELFV+KFSCK+PVYHNCRIYANDGRLLCYCD+RKLE
Sbjct: 481 SSHSAPKQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKLE 540
Query: 541 WYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIP 600
WYL R LA+LV ++PPAI LLFEPKGRPEDEGNDFYIQ+K+NICVGCGEG HYLRYRIIP
Sbjct: 541 WYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRIIP 600
Query: 601 SCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKHKRELAAEFGIPLFVRRVVDTKEA 660
SCYR+HFPEHLKSHRSHDIVLLCVDCHE AHAAAE++K+++A EFGIPLFVRRV+D+KEA
Sbjct: 601 SCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKEA 660
Query: 661 ---FDMAEPSDSGTNVEEEGVSPLELRTAAMALLRHGPRMPSKRQEELMLIVMRYYGRRE 720
+ E +G + E+ GVSPL LR+AAMALLRHG RMPS R+EEL+ V YYG R+
Sbjct: 661 QGTSSLVEDESTGDS-EDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGRD 720
Query: 721 ISEEDLERALLVGMSPHERRRLQKKKGLAFKHSAQSVFPDA---EHQHGACNIDTSTVVN 780
+SEEDLE+ALL+G+SPHERR+L++KKG++FKHSA+ D E+ G D ++
Sbjct: 721 LSEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQEDENNDGEALADFEKIM- 780
Query: 781 SSVDANNHMNSDSGSVSETCVPGGEVNFSDNGYAKTAQPKFNSKLSLLGHGPHGKLVVDH 840
+V+ + ++ SE G +D + NSKLSLLGHGPHGK +V++
Sbjct: 781 -TVERSTVVDDSGDGTSE---GDGAKELNDTQCNGNTLHQQNSKLSLLGHGPHGKQIVEY 840
Query: 841 LLREYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNH 857
LLRE+GEDG+R FCQRWR+VFV A+ PR LP GW+V+H
Sbjct: 841 LLREHGEDGVRDFCQRWRKVFVDAVHPRHLPGGWNVSH 870
BLAST of Clc02G02030 vs. TAIR 10
Match:
AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 203.4 bits (516), Expect = 7.7e-52
Identity = 135/382 (35.34%), Postives = 203/382 (53.14%), Query Frame = 0
Query: 10 ALVVASFAALTILFTTRQRRKRRSVRSSCYLRDDQKPQCAFKRVLADNSYSAFKHLELNM 69
A V + + + R + + ++ +KPQ + +L +N+ F+H+ L
Sbjct: 162 AAVNGGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEY-NILVNNANLPFEHVWLER 221
Query: 70 NKDKDVNSHPYESEILSLLENSSPEFDFISERTDLTLSDT-YVWVETESQLEELVDVLNK 129
++D HP E S+L+ + + + L L T + +V+ L+ELV L
Sbjct: 222 SEDDLRAMHPLEK--FSVLDFVDKDVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRS 281
Query: 130 EMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVDTIALHDSMN-LLRPVFANSRICKVF 189
FAVD E + RSF G T L+QIST EDY+VDT L + LR +F + + KV
Sbjct: 282 VEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVM 341
Query: 190 HGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVSTNKMLQREDWR 249
HGAD DI+WLQRDF IYV NLFDT +A VL+ + SL +LL+ +CGV+ NK Q DWR
Sbjct: 342 HGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERNSLEFLLQHFCGVTANKEYQNADWR 401
Query: 250 QRPLSADMVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFILEASRRSNMTCLQL 309
RPL +M +YAR D HYLLYI + + EL+++ ++ + D + +LE +RS C QL
Sbjct: 402 IRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKDDAHTD--SPLLEVYKRSYDVCTQL 461
Query: 310 YSKETEGSPGESAASSISSRHLNSQCGSTLISCKTQFQDHVRRLCAWRDLMARVHDESLR 369
Y KE + S H+ + + + V LC WRD +AR DES
Sbjct: 462 YEKE--------LLTENSYLHVYGLQAAGFNAAQLAI---VAGLCEWRDFIARAEDESTG 521
Query: 370 YVLSDQAIVALANQVSKNKGEL 390
YVL ++ ++ +A ++ + G+L
Sbjct: 522 YVLPNKVLLEIAKEMPDSVGKL 527
BLAST of Clc02G02030 vs. TAIR 10
Match:
AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 201.4 bits (511), Expect = 2.9e-51
Identity = 132/340 (38.82%), Postives = 183/340 (53.82%), Query Frame = 0
Query: 45 KPQCAFKRVLADNSYSAFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDL 104
KPQ +K +L DN+ + F+H+ L ++D HP E LS+++ + L
Sbjct: 52 KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLEE--LSVMDFVDRNLSEMRPVKPL 111
Query: 105 TLSDT-YVWVETESQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVD 164
L +T + VE LE+L L FAVD E + R+F G T L+QIST EDY+VD
Sbjct: 112 PLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTRTEDYIVD 171
Query: 165 TIALHDSMN-LLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQ 224
L D + LR +F + + KV HGAD DI+WLQRDF IYV NLFDT +A VL +
Sbjct: 172 IFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLER 231
Query: 225 KSLAYLLETYCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNE 284
SL +LL+ YCGV+ NK Q+ DWR RPL M +YAR D HYLLYI + + EL + +
Sbjct: 232 NSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRMELHTMAK 291
Query: 285 NSSTDDKFNFILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKT 344
D + ++E +RS C+QLY KE + + +LN+ S
Sbjct: 292 EDEQSD--SPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQLSI------ 351
Query: 345 QFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVALANQV 383
V LC WRD +AR DES YVL ++ + +A ++
Sbjct: 352 -----VAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEM 375
BLAST of Clc02G02030 vs. TAIR 10
Match:
AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 201.4 bits (511), Expect = 2.9e-51
Identity = 132/340 (38.82%), Postives = 183/340 (53.82%), Query Frame = 0
Query: 45 KPQCAFKRVLADNSYSAFKHLELNMNKDKDVNSHPYESEILSLLENSSPEFDFISERTDL 104
KPQ +K +L DN+ + F+H+ L ++D HP E LS+++ + L
Sbjct: 52 KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLEE--LSVMDFVDRNLSEMRPVKPL 111
Query: 105 TLSDT-YVWVETESQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHEEDYLVD 164
L +T + VE LE+L L FAVD E + R+F G T L+QIST EDY+VD
Sbjct: 112 PLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTRTEDYIVD 171
Query: 165 TIALHDSMN-LLRPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQ 224
L D + LR +F + + KV HGAD DI+WLQRDF IYV NLFDT +A VL +
Sbjct: 172 IFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQASRVLKLER 231
Query: 225 KSLAYLLETYCGVSTNKMLQREDWRQRPLSADMVQYARTDAHYLLYIANCLLFELKQVNE 284
SL +LL+ YCGV+ NK Q+ DWR RPL M +YAR D HYLLYI + + EL + +
Sbjct: 232 NSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRMELHTMAK 291
Query: 285 NSSTDDKFNFILEASRRSNMTCLQLYSKETEGSPGESAASSISSRHLNSQCGSTLISCKT 344
D + ++E +RS C+QLY KE + + +LN+ S
Sbjct: 292 EDEQSD--SPLVEVYKRSYDVCMQLYEKELWTRDSYLHVYGVQTGNLNAVQLSI------ 351
Query: 345 QFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVALANQV 383
V LC WRD +AR DES YVL ++ + +A ++
Sbjct: 352 -----VAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEM 375
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_011658699.1 | 0.0e+00 | 93.87 | protein RRP6-like 3 isoform X1 [Cucumis sativus] >KGN43518.1 hypothetical protei... | [more] |
XP_038887745.1 | 0.0e+00 | 93.41 | protein RRP6-like 3 [Benincasa hispida] >XP_038887746.1 protein RRP6-like 3 [Ben... | [more] |
XP_008455438.1 | 0.0e+00 | 93.53 | PREDICTED: protein RRP6-like 3 isoform X1 [Cucumis melo] | [more] |
XP_022135803.1 | 0.0e+00 | 90.12 | protein RRP6-like 3 isoform X1 [Momordica charantia] | [more] |
KAA0040242.1 | 0.0e+00 | 88.64 | protein RRP6-like 3 isoform X1 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A9LLI8 | 0.0e+00 | 63.59 | Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1 | [more] |
A9LLI7 | 1.1e-50 | 35.34 | Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1 | [more] |
Q0WVE8 | 4.1e-50 | 38.82 | Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1 | [more] |
Q10146 | 6.5e-48 | 39.13 | Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC... | [more] |
P56960 | 5.5e-47 | 38.14 | Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K254 | 0.0e+00 | 93.87 | HRDC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G043600 PE=4 S... | [more] |
A0A1S3C120 | 0.0e+00 | 93.53 | protein RRP6-like 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495596 PE=4 SV=1 | [more] |
A0A6J1C5X3 | 0.0e+00 | 90.12 | protein RRP6-like 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007668 PE... | [more] |
A0A5A7T9W4 | 0.0e+00 | 88.64 | Protein RRP6-like 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A6J1C2I3 | 0.0e+00 | 90.21 | protein RRP6-like 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007668 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT2G32415.1 | 0.0e+00 | 63.66 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT2G32415.2 | 0.0e+00 | 63.33 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT5G35910.1 | 7.7e-52 | 35.34 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT1G54440.1 | 2.9e-51 | 38.82 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT1G54440.2 | 2.9e-51 | 38.82 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |