Clc02G01890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G01890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein translation factor SUI1 homolog
Location	ClcChr02: 1713637 .. 1720445 (+)
RNA-Seq Expression	Clc02G01890
Synteny	Clc02G01890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCGTAAAAAATAAATAGGAGAAAAAAACTAAAACCGACTTAAATCGATATAATAGAGGTTTGTGTGGCTTGCAAAAATTCTCTCTTTCACATAAGCTTCATTGACTTGAAAACCTCGGTGTTTCAGGTCTGTTCGTCTCCGGATTCACATCTTTTTCTCCCGGTAAAATTCTTCTTCATCTCTCTTTCTTTATTGTTGATCCAAGCACTAATTTCTTTTCTGTTCTCGTTTTTATCGATTTCTTCTTCATCATTTTCCGATTTCTCTAAATGGGTTAGGGTTTATTTTTCTCCTTTCTTTGTGCCGGGATCGAAGCGCGAGATCTGTTAGTTTTTTGAGATGTTAAGAGTTTTCTCTTTCTCTTGTGGGGTCTGGGGGGTGGCAAGATATTGACATGGTAATTGCTATCAAATTTGAATTTTGTTTCCGAAGATAGGGGTGGTTATTTGGTTCGTGGTGAAATGGTTTGATCCCGTACAGAATATTTGCTTTTGTAGTTGGTTGTGTTCTATTCATAATTTGGATAAAACAGAATTTAGTGTCGTGAAAAAGGCCTTAATGGTTGTATTCTTTTCATAATCTATAGTTCGATCTACCAATTTGTTGCTATTTGATAGAACGAGGTTATGAATTTTTTAGTATACAGTCTTTTGATGTTTGTTCACGAAGTATGTGAGAGGATCAAAAGGATTGTAGATTAAACGTGGGACTCTGTAGCTATATGAGAACGAGGGGGTGGATTACTATGTTTTTCTTTTGAACAAATAGATGCTTCTGTATCTTGTTGTTTCAACTCTGGATCTGTTATGTCTTGCAGATTTGAGCACAGTTTAATTGAGAGCAAATATCTTATTTGCTGGTTGGTTACCTGTGTTCTACCCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGGTAACTTGACAAGTCTCTAATACTAGCTTTTCGCTATTTAGTTAGTTGTGTTGCATTAGGAGCCTATATATTTGCTTCAAAATTAATTTAACTTATTTGGTGGTTAGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTAGTTCTCCCAGGAGGCCCTCCTTTTCGATGCTAAAATCAATTGTATGAACACAGAACACTTTCACTTTATCCAAATATGGGGTGGCTGAGCTGAAACTTAGCAGTTGTTTTTTGTGTAAAGCTGCTGGTTGACTATGTTTATTTATGTTCGATTTGCATTAGGTTAGTATTAACAAGAACCTAGAGGGTTTTATTAGATTATTATTTGCAATTTTGCCCCTTCCCTTGGGAAAAACATACAATGTTTCTGCTAACTTCGGCTGTTATGATTGCCTTCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGTAACCAAGGATGGTCTGTAAATAGTTTGTGACCTGGAATTATGTTTCTGCTAACAGTTTTTTGATATGTTCGCACTTTTTCCTGCATCGATAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGAAGAGAAGCAAGATCGAATTCTATCACTGTTTACAGCAGCTGAACTAATAGTGGTGGACATTATATAGCTATTTTTAGAACTTGAAGAGTGCCTGTTACAACTCTAGGTCCATGTACGTTTTCTTTTCTTTGTTATGCAGACCAAGTTATGGATCATTGGACCTTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGGTCGGTTGGATGTAACAAGCACTAGATATGATATTTGCTGAGCATCACTCATTCATGGGGCTACTTTTTTGGGATAGAGATTCGGCGATAACTTAATTCTTTTGTTCTTTTTGTGAAAGAGTCTCTGCCTGAATCGAATATATACTCTCAAAGAGAAGAGGGATCATCTCTTCTATTATGATATTCATAAGAAGTGTGGGTTCTTCACTTTTGGCTTACTTTTGAGTCTTTTTGCAGTCCAGAGCTATAGGGTGTCCACAATCTTAATTCAGGACGAGAGGGACTTATTATGTTTTCAAATAGGTCTTGTCAACAAAATAAATAAATGTCTTTTTTGTTTTCTTTGTCAAATGTTGAGTCAATGTCAAATTACCAATTAGAAAAAATTCAAATATTGGACATATAAGTTACTACATTTATGTGGGGTGGCTTTAAACGTTTACTCGTGCACATCGGCTACGTGAGTAAAAATATGTGTACTGATGTTGGTTTAAGTTAAAATCAAAAGATGCCACAAAATCTTTAATTAATTAATACCGTCAATCACTAACGTAAAGTTGAAATGGTTTTGAAATTTCGTATGCTTCTATCTTAATTGCCGACTTATTGAAAAAGAGAGAGAAGAAGAAAAATTAGAGAAGGAATACAGTATTTAATGGTTTTTGTTCCTATGACTTGAAAGGGTGGTTTTGAAATGAATGGTAATTTTGGGACTATTGAACGATTTAAGATATTTTTGACATAAAATATAAAATTTAGAGATATATTATATAATTTAGCTGGCAAAATAAGCTGTTTTTATAATCTTAATGATATGAAGGTTTGTTTAATTACGTTATCATTCACTTACTTTTCATTTCTTATTTTCTCAACAAGGTTGGATAATTGGGTTTTTTTTTCCCTCATTTTTACTTAGAAACGATTCTTTTCTGTAATTGTTTTTTGTTAATTGTTCTTTGAAATTGGGAATTAAAAATTGGGTTGTTTTATATAAAAATAGTTTTGAGGATTAAATATTAACCAATTTATGTTATGTTTATATATAGATCTTTCATTGTCCATTTGATTGATTGAAGAAACTATGATTCAAAATTAAAAAAAAAAAAAAAAAAACAAAGTTAATTTTGATACTTTCCAAATTGAATTTAGGAAACATTTCTTAAAAATAAGAATAAAAAAGAAATGGAAACACAATTACCAAATAAGAAGTTTGAAATAAATTTGTTACTATTACTATATTTACCAAAATATTATTGGGTAGCGTATTCCTTGTAATATACAAAGAAATGATTGCAAGTACCTAGATTTTTGTATAATCTTTTGGTTTAAAGGTTGGTATGGGTTGGTAAAGAAAACATATTATGTGATGTGTAAACAAACGTGTAGGCTAATTTTATTTTAGAAAGCAACGAATAATCTTCATTAGATTCCCATTACACTTTTTTAAGAGTATATCAATAAACAATTCGTAAGGTTGGTCTTTTTTAATGGTAGGAATATCTTGCAAACCTCAATGGAATGATAAGATAGTGGAATCTTTCTTTTTTATTTGTGGAACAAAGGATAATGGAACCCGAAAAAGTAAATATGCAAAGATGAAATTTGTTATTTTCTAAAGTAATTTTGACATTAGAGTCATCATTCATATATGTTCATGTAGAATGTTACGTCTCCCTACAAATATACTTGTAAAAATGTAGAAAATTCTAAGTTGCTTGTTTGGTAGAGAATATTATTATATATTATTTTTATGTAAATTAGTGAGATATATTGAATTTTTAAATATGTATTTAGTAGCAAATTCAAAAATTAGATTCTAATTTAATTTAAGTTGTTATTTAGAAGTGTTTGATATCATATATTTTTAAATCATAAAATTAGTTGTAATTACTAACTAATATTTAGTTTACAACAAATTATTATTAATTTATCTATGAATATGATTTACGTTAAAAGTGTTATATAAGTATTATTTTGTAATACTATATAATCTATAATACATTACATAACATATGTAACATTTTTTTTAAAAAAAATGAATTGAGTTTATAGTATGACCTATTATATTTTTAAATATTTTTTTTTATTTAACATAGTTCTACATTTTAAATTTTAAAATTCAAAATCTAAATACATTGAAAATATAAAAATGTTGATTTCAGGGTTTGCACAGTTTAAATTACATAATTCAAAAACAATTTTTAGAAGCAAAATTTGAATGTTCTTCAAACATATATTTGTTGAATTTGATTTCTCTACCAAACATACGCTTAGAAATTACGGGTGCAATAATCTTATTTATAATGCAGCTAAAATTAAAAAAGCAACTAAAATGACGTCGTTTCCATGGCTTACCATGAGCCGTCAGATCAGCTCCGGTCGTCTCTCATCTGCACTGTCCAAAAAATAAATATGAAGAAAATATTAAAAAAAAAAAAAAAAATCCAAAACCGACTAATATCGATATAATAGAGGTTTGTGTGGCTTGCATGTTTTCTCTCGCATATAACCTTCGTTTTGACTTCAGCCCTTTGGTTTTACGCTCTTCGTCTCCGGATTCACACCTTTTTCTCTTGGTAAAAAATTATTGTTCATCGCTCTATCTTTCGTTTTCATTGATCCACAATTTCAATTCTTTTTGTTTTCTTCTTCACCGTCTTTCTACTTTTCTTTTATAGGGTTAGGGTTTCTCTTTTGTGCTTGCTTGTATTGTTTTTTCTGTTTCTGGGATCGAACCGCAAGATCCGTTTATTTTCTGGGATGTAAGTGTTTTGATGTTTTCGGATTGAAAACTTGTACCTTGGTTGATTGTTATTCTTTTCGATTGAGTGATTTCTGTCTTTTATGCACATTATAAGATAATTAGATGAAGAAACAAAGGGTTTAGATATGATTTAGGTATACATGACTGGTTATTTAGTTTCTTGGAGAAGAGCAGATAAATGGGTTTGTTTTTCCTTTAATTGTTTGATTCCTTTGTAGATCGTTTAATTTTCTTCAATTTGTTCGATTTTGGATTTGGAGAAAAGAAATAAGTAGTGTATGCTCTTTTGATCTTTGTTTAAGAAGTCTATGGGGGCTGTGGGGATTGAGCGGATCAAAGATTGAAAACAGGGCTTGGTGCATGGATGAGGGGCGGATTATATTGTTTCTTGTGGTTTTCATTTTTCGGTCTGGTATGTTTTGCAGTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGGTAGCTTAACAAGTCCCTGGTCTTGGTTTTAACCTTTTTGTTGTGTTGTACTGTATAAGAAGCCTGAATGTTCGTTTCGAAATTAATTAATTTCGTTTGGTGGTTAGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTCTGTTCTCCCACCCTAAATTATTTGTATTTAAGCCCCCTCTTTTGTTGATTTGCCTGACATCAAAACTAAAAGAGAAAAAAGTTTCGATTTCGGATAAAGTTGGGATTAGTGTTATAACATTGGGGGGTGCAAGAATAATGGTAATGCTCTCCTTTGGCAAAATAAAGAGGGAAAGGAAAACTTACTCATTGGAAGTTTGCTCTGCCTGTCACTTAGCAGTCAATCCCTGTTTATGGGTTGTGGTTTGGACGTTTGGTTACATATCATAAACAAGAATCTAGATGGTGTTGTTGGTACTGTTGCATATAACAAGATAGTAGGAATGCTTACATGCATGTGCTTTTCTTTCTTTGTTTCCTTTTCTGTAATATGATAATATACCATGCTAATCAATTACATCATTTGTATTGATTGCCCTGCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGGTAATGGTTGACTGTATATAGTTTGTGGTGATAAATGTTTTTCGGTAATCATCTTTGATACATGCTCCACTTGTTCTGCATCGATAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGTTTCTAAAGAACATCAAGATTGTGTTTACAGCAGCTTATAACTGATAGTAGTGGACATAATATAACTATTTTTAGATCTTACGAGTGCATGCTACAACTCTGGATAAATGTACGTTTGCTTTGCTTTGTTATGCAAACCAAGTTATGGATTGGTGGACCCGTTTAGTTAATAATATGTTTCTTGCTTTCTCACCTCGACAGAAACTATAGGACCTTGGTCTCTCATTTTCCTGGTTTTTGTTGATTTGTTTACAATATGCTCGAGATATAATTATGTGCAGAGCATTGTTCAACCTTTCGCCCTGCTTTCTCGTCATCGAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTGCTGCATTCGGGCACTATTCCCCAACTCCTGATTGAGTTGGTTCTCAGTTCTCACTAATTACTAAGCTCTGAAATGTTATTATATATAGGTTTAAATTACTGAACTTTCAACTTCCATGAATAGGTCTTCGAATCTTTTGGGTATCTAAATATAACATTAACAGTATTAGTTTGAATGGGACTTTGATAATACAGTTTCAAGTTTGCAGATTGGTTGAAGGATCTAG

mRNA sequence

ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCAGCAAATATCTTATTTGCTGGTTGGTTACCTGTGTTCTACCCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGACCAAGTTATGGATCATTGGACCTTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGGTCGGTTGGATAGTCTCTGCCTGAATCGAATATATACTCTCAAAGAGAAGAGGGATCATCTCTTCTATTATGATATTCATAAGAAGTGTGGTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGTTTCTAAAGAACATCAAGATTGTGTTTACAGCAGCTTATAACTGATAGTAGTGGACATAATATAACTATTTTTAGATCTTACGAGTGCATGCTACAACTCTGGATAAATGTACGTTTGCTTTGCTTTGTTATGCAAACCAAGTTATGGATTGGTGGACCCGTTTAGTTAATAATATGTTTCTTGCTTTCTCACCTCGACAGAAACTATAGGACCTTGGTCTCTCATTTTCCTGGTTTTTGTTGATTTGTTTACAATATGCTCGAGATATAATTATGTGCAGAGCATTGTTCAACCTTTCGCCCTGCTTTCTCGTCATCGAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTGCTGCATTCGGGCACTATTCCCCAACTCCTGATTGAGTTGGTTCTCAGTTCTCACTAATTACTAAGCTCTGAAATGTTATTATATATAGGTTTAAATTACTGAACTTTCAACTTCCATGAATAGGTCTTCGAATCTTTTGGGTATCTAAATATAACATTAACAGTATTAGTTTGAATGGGACTTTGATAATACAGTTTCAAGTTTGCAGATTGGTTGAAGGATCTAG

Coding sequence (CDS)

ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCAGCAAATATCTTATTTGCTGGTTGGTTACCTGTGTTCTACCCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGACCAAGTTATGGATCATTGGACCTTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGGTCGGTTGGATAGTCTCTGCCTGAATCGAATATATACTCTCAAAGAGAAGAGGGATCATCTCTTCTATTATGATATTCATAAGAAGTGTGGTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGTTTCTAA

Protein sequence

MSRRINYEILSAPANILFAGWLPVFYPGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTFLINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKKCGFEELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF

Homology

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BLAST of Clc02G01890 vs. NCBI nr
Match: KAG7011916.1 (hypothetical protein SDJN02_26824 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.9 bits (1060), Expect = 2.6e-111
Identity = 226/308 (73.38%), Postives = 232/308 (75.32%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTF 152
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH+ V      
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHECV------ 120

Query: 153 LINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKKCGF 212
                        L+ L H F            LCL  ++    +  H F +        
Sbjct: 121 -------------LQLLVHGFF-----------LCLRCLFCSCIEAQHPFVF-------- 180

Query: 213 EELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLT 272
                                 IPSAFDPFADANAEDSGAG KEYVHVRIQQRNGRKSLT
Sbjct: 181 --------------------CDIPSAFDPFADANAEDSGAGGKEYVHVRIQQRNGRKSLT 240

Query: 273 TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK 332
           TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK
Sbjct: 241 TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK 250

Query: 333 ENIKIHGF 341
           ENIKIHGF
Sbjct: 301 ENIKIHGF 250

[Close]

BLAST of Clc02G01890 vs. NCBI nr
Match: KAF9679100.1 (hypothetical protein SADUNF_Sadunf07G0104900 [Salix dunnii])

HSP 1 Score: 351.3 bits (900), Expect = 9.4e-93
Identity = 194/308 (62.99%), Postives = 207/308 (67.21%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSEF+  IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLTTVQGLKKE+SYNKIL
Sbjct: 1   MSEFDNTIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYNKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTF 152
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ                     
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ--------------------- 120

Query: 153 LINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKKCGF 212
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 213 EELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLT 272
              NL   + F        D+ IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLT
Sbjct: 181 ---NLSFMSEF--------DNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLT 216

Query: 273 TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK 332
           TVQGLKKE+SYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK
Sbjct: 241 TVQGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK 216

Query: 333 ENIKIHGF 341
           ENIKIHGF
Sbjct: 301 ENIKIHGF 216

[Close]

BLAST of Clc02G01890 vs. NCBI nr
Match: KAF3601457.1 (hypothetical protein F2Q69_00034151 [Brassica cretica])

HSP 1 Score: 327.0 bits (837), Expect = 1.9e-85
Identity = 183/318 (57.55%), Postives = 209/318 (65.72%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSE + Q+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH--------- 152
           KDLKKEFCCNGTVVQD ELGQV          V      +   + E  ++H         
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQV---------RVLKLRCYSASRRPEEERLHVPSPGWPCE 120

Query: 153 -DQVMDHWTFLINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLF 212
             Q  D W       +FP                 P +    SL  + +           
Sbjct: 121 EGQHQDTWFLSCLCCSFPR----------------PFASFCSSLSFSVV----------- 180

Query: 213 YYDIHKKCGFEELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRI 272
                  C  ++ +            S  DSQ+P+AFDPFADANAEDSGAG KEYVH+R+
Sbjct: 181 -------CPPDQQS----------FMSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRV 240

Query: 273 QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVST 332
           QQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVST
Sbjct: 241 QQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVST 265

Query: 333 FLVQAGIVKKENIKIHGF 341
           FLVQAG+VKK+NIKIHGF
Sbjct: 301 FLVQAGLVKKDNIKIHGF 265

[Close]

BLAST of Clc02G01890 vs. NCBI nr
Match: KAB5548380.1 (hypothetical protein DKX38_011786 [Salix brachista])

HSP 1 Score: 323.6 bits (828), Expect = 2.1e-84
Identity = 190/352 (53.98%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSEF+  IP+AFDPFA+AN EDS AG K+YVHVR+QQRNGRKSLTTVQGLKKE+SYNKIL
Sbjct: 1   MSEFDNAIPTAFDPFAEANVEDSSAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYNKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTF 152
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ                     
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ--------------------- 120

Query: 153 LINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKKCGF 212
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 213 EELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLT 272
              NL   + F        D+ IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLT
Sbjct: 181 ---NLSFMSEF--------DNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLT 240

Query: 273 TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ------------------------ 332
           TVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQ                        
Sbjct: 241 TVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQMIFFPSIPPKPLRNFHHYSLLVDS 260

Query: 333 --------------------VIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
                               VIQLQGDQRKNVS+FLVQAGIVKKENIKIHGF
Sbjct: 301 VSGPQRMNACSMDLRISSGMVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 260

[Close]

BLAST of Clc02G01890 vs. NCBI nr
Match: MBC9852351.1 (hypothetical protein [Adiantum capillus-veneris])

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-62
Identity = 145/311 (46.62%), Postives = 170/311 (54.66%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDS---GAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYN 92
           MSE  + +PSAFDPF + +   +   G+ AK  VH+ +QQRNGRK LTTVQG+ K FSYN
Sbjct: 1   MSEVEIHLPSAFDPFKEVDINTTVTCGSVAKGAVHICVQQRNGRKCLTTVQGISKSFSYN 60

Query: 93  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDH 152
           KILKDLKKEFCCNG VV D ELGQVIQLQGDQRKNV+ FLVQ G+ KKE+IKIHD     
Sbjct: 61  KILKDLKKEFCCNGNVVNDLELGQVIQLQGDQRKNVAQFLVQTGVAKKEHIKIHDP---- 120

Query: 153 WTFLINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKK 212
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 213 CGFEELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRK 272
             F+E+++                                 G+ AK  VH+R+QQRNGRK
Sbjct: 181 --FKEVDIN---------------------------TTVTRGSVAKGVVHIRVQQRNGRK 218

Query: 273 SLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGI 332
            LTTVQG+ K F YNKILKDLKKEFC N  V+ D ELGQVI+LQGD RKNV  FLVQ G+
Sbjct: 241 CLTTVQGISKSFIYNKILKDLKKEFCSNSNVLNDLELGQVIRLQGDHRKNVGQFLVQTGV 218

Query: 333 VKKENIKIHGF 341
            KKE++KIHGF
Sbjct: 301 AKKEHVKIHGF 218

[Close]

BLAST of Clc02G01890 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 2.2e-52
Identity = 99/109 (90.83%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           DSQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLK
Sbjct: 5   DSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIHGF
Sbjct: 65  KEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc02G01890 vs. ExPASy Swiss-Prot
Match: O48650 (Protein translation factor SUI1 homolog OS=Salix bakko OX=72444 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.8e-52
Identity = 99/109 (90.83%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           D+ IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLTTVQGLKK++SYNKILKDLK
Sbjct: 5   DNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQAGIVKKENIKIHGF
Sbjct: 65  KEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113

[Close]

BLAST of Clc02G01890 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.4e-52
Identity = 98/111 (88.29%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MS+  VQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH 144
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIH
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIH 111

[Close]

BLAST of Clc02G01890 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.4e-51
Identity = 97/109 (88.99%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           DSQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLK
Sbjct: 5   DSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++I+IHGF
Sbjct: 65  KEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]

BLAST of Clc02G01890 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.1e-50
Identity = 101/111 (90.99%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSG--AGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKD 291
           D QIP+AFDPFA+ANA DSG  AG+K+YVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKD
Sbjct: 5   DIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKD 64

Query: 292 LKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           LKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKE+IKIHGF
Sbjct: 65  LKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of Clc02G01890 vs. ExPASy TrEMBL
Match: A0A6N2MLZ5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS393316 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.3e-91
Identity = 190/308 (61.69%), Postives = 205/308 (66.56%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSEF+  IP+AFDPFA+AN EDS AG K+YVHVR+QQRNGRKSLTTVQGLKKE+SYNKIL
Sbjct: 1   MSEFDNAIPTAFDPFAEANVEDSSAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYNKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTF 152
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ                     
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ--------------------- 120

Query: 153 LINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKKCGF 212
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 213 EELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLT 272
              NL   + F        D+ IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLT
Sbjct: 181 ---NLSFMSEF--------DNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLT 216

Query: 273 TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKK 332
           TVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQAGIVKK
Sbjct: 241 TVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKK 216

Query: 333 ENIKIHGF 341
           ENIKIHGF
Sbjct: 301 ENIKIHGF 216

[Close]

BLAST of Clc02G01890 vs. ExPASy TrEMBL
Match: A0A5N5LZY1 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_011786 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84
Identity = 190/352 (53.98%), Postives = 205/352 (58.24%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSEF+  IP+AFDPFA+AN EDS AG K+YVHVR+QQRNGRKSLTTVQGLKKE+SYNKIL
Sbjct: 1   MSEFDNAIPTAFDPFAEANVEDSSAGTKDYVHVRVQQRNGRKSLTTVQGLKKEYSYNKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTF 152
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ                     
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQ--------------------- 120

Query: 153 LINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHKKCGF 212
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 213 EELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLT 272
              NL   + F        D+ IP+AFDPFA+ANAEDSGAG K+YVHVR+QQRNGRKSLT
Sbjct: 181 ---NLSFMSEF--------DNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLT 240

Query: 273 TVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQ------------------------ 332
           TVQGLKK++SYNKILKDLKKEFCCNGTVVQDPELGQ                        
Sbjct: 241 TVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQMIFFPSIPPKPLRNFHHYSLLVDS 260

Query: 333 --------------------VIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
                               VIQLQGDQRKNVS+FLVQAGIVKKENIKIHGF
Sbjct: 301 VSGPQRMNACSMDLRISSGMVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 260

[Close]

BLAST of Clc02G01890 vs. ExPASy TrEMBL
Match: A0A5C7IE53 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008868 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.4e-57
Identity = 135/302 (44.70%), Postives = 166/302 (54.97%), Query Frame = 0


Query: 29  QPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSY 88
           Q ++M + +VQIPSA+DPF+D   +DS  GAK YVH+R+QQRNG+K LTTVQGL+++FSY
Sbjct: 676 QTNYMVDLDVQIPSAYDPFSD--TKDSAPGAKGYVHLRVQQRNGKKCLTTVQGLREDFSY 735

Query: 89  NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMD 148
            KILKDLKKEFCCNG VVQD  +G+V+QLQGDQR NV  FLV+  IV KE IKIHD +  
Sbjct: 736 QKILKDLKKEFCCNGNVVQDKVMGKVLQLQGDQRMNVLNFLVKGKIVDKEQIKIHDSI-- 795

Query: 149 HWTFLINDDAFPAFSSRLRHLTHHFIEYGPVSGRLDSLCLNRIYTLKEKRDHLFYYDIHK 208
                       +  S LR+                                        
Sbjct: 796 ------------SLRSILRY---------------------------------------- 855

Query: 209 KCGFEELNLRAHNLFAGYLCSTPDSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGR 268
                                                         K +VH+R+QQRNG+
Sbjct: 856 ----------------------------------------------KRHVHLRVQQRNGK 875

Query: 269 KSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 328
           K LTTVQGL+++FSY KILKDLKKEFCCNG VVQD  +G+V+QLQGDQR NV  FLV+  
Sbjct: 916 KCLTTVQGLREDFSYQKILKDLKKEFCCNGNVVQDKVMGKVLQLQGDQRMNVLNFLVKGK 875

Query: 329 IV 331
           IV
Sbjct: 976 IV 875

[Close]

BLAST of Clc02G01890 vs. ExPASy TrEMBL
Match: M5WVD0 (SUI1 domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022105mg PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.9e-55
Identity = 114/142 (80.28%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 2   SRRINYEILSAPANILFAGWLPVFYPGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKE 61
           S R N  IL  P    F G+L +F+  Q SFMSEF+ Q+PSAFDPFADANAEDSGAG KE
Sbjct: 32  SCRFNINILRKP----FVGYL-IFFLQQSSFMSEFDTQVPSAFDPFADANAEDSGAGTKE 91

Query: 62  YVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 121
           YVHVR+QQRNGRKSLTTVQGLKKE+SYNKILKDLKKEFCCNGTVV+DPELGQVIQLQGDQ
Sbjct: 92  YVHVRVQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQ 151

Query: 122 RKNVSTFLVQAGIVKKENIKIH 144
           RKNVS+FLVQAGIVKKE+IK+H
Sbjct: 152 RKNVSSFLVQAGIVKKEDIKLH 168

[Close]

BLAST of Clc02G01890 vs. ExPASy TrEMBL
Match: A0A6J1HZK0 (protein translation factor SUI1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468348 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH 144
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH 111

[Close]

BLAST of Clc02G01890 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-53
Identity = 99/109 (90.83%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           DSQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLK
Sbjct: 5   DSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIHGF
Sbjct: 65  KEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc02G01890 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-53
Identity = 98/111 (88.29%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 33  MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 92
           MS+  VQ+P+AFDPFADANAEDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 93  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIH 144
           KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIH
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIH 111

[Close]

BLAST of Clc02G01890 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-53
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           DSQ+P+AFDPFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLK
Sbjct: 5   DSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIHGF
Sbjct: 65  KEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc02G01890 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-53
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           DSQ+P+AFDPFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLK
Sbjct: 5   DSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIHGF
Sbjct: 65  KEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc02G01890 vs. TAIR 10
Match: AT5G54760.3 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-53
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 232 DSQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLK 291
           DSQ+P+AFDPFADAN EDSGAG KEYVH+R+QQRNGRKSLTTVQGLKKE+SY KILKDLK
Sbjct: 5   DSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLK 64

Query: 292 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 341
           KEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+NIKIHGF
Sbjct: 65  KEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of Clc02G01890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011916.1	2.6e-111	73.38	hypothetical protein SDJN02_26824 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAF9679100.1	9.4e-93	62.99	hypothetical protein SADUNF_Sadunf07G0104900 [Salix dunnii]	[more]
KAF3601457.1	1.9e-85	57.55	hypothetical protein F2Q69_00034151 [Brassica cretica]	[more]
KAB5548380.1	2.1e-84	53.98	hypothetical protein DKX38_011786 [Salix brachista]	[more]
MBC9852351.1	2.3e-62	46.62	hypothetical protein [Adiantum capillus-veneris]	[more]

BLAST of Clc02G01890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41568	2.2e-52	90.83	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
O48650	3.8e-52	90.83	Protein translation factor SUI1 homolog OS=Salix bakko OX=72444 PE=3 SV=1	[more]
Q94JV4	6.4e-52	88.29	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q9SQF4	2.4e-51	88.99	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
A6MZM2	2.1e-50	90.99	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of Clc02G01890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6N2MLZ5	4.3e-91	61.69	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS393316 PE=3 SV=...	[more]
A0A5N5LZY1	1.0e-84	53.98	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_011786 PE=3 SV=1	[more]
A0A5C7IE53	2.4e-57	44.70	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008868 PE=3 SV=1	[more]
M5WVD0	2.9e-55	80.28	SUI1 domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa...	[more]
A0A6J1HZK0	1.1e-54	100.00	protein translation factor SUI1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

BLAST of Clc02G01890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27130.1	1.6e-53	90.83	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	4.6e-53	88.29	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	4.6e-53	89.91	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	4.6e-53	89.91	Translation initiation factor SUI1 family protein	[more]
AT5G54760.3	4.6e-53	89.91	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.780.10		coord: 229..340 e-value: 4.9E-47 score: 161.3 coord: 29..144 e-value: 6.0E-46 score: 157.8
None	No IPR available	PANTHER	PTHR10388:SF52	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 33..143 coord: 231..340
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 33..143 coord: 231..340
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 38..143 e-value: 1.6E-53 score: 177.9 coord: 233..340 e-value: 6.0E-55 score: 182.5
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 61..143 e-value: 4.47901E-50 score: 160.008
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 256..339 e-value: 5.18549E-51 score: 162.319
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 60..134 e-value: 4.0E-25 score: 88.1 coord: 255..329 e-value: 4.0E-25 score: 88.1
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 258..328 score: 24.348866
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 63..133 score: 24.348866
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 232..340
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 30..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G01890.2	Clc02G01890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity