Clc02G00810 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G00810
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr02: 777443 .. 777968 (+)
RNA-Seq ExpressionClc02G00810
SyntenyClc02G00810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCGAGTTATATCGTAAATGTGCCAAAAATTGAGGTGAGGGGCTCGGCTTAGTTGATCCGGGTTTGAGAAAATATTTGGTTCAAACGAACCGAACCGGTTTAAGTACATGGGGTTTTTCCTTTTTTTGCCAAAAGATATGTAGGGTTTAAGTCCTTTTCCTTTCCCTCCCATTCTGTCGAGCTCTTCTTCGTCGTCTCCGGGTACCAACGTCGTTCCCGGCCGTTCTCCTCCAACCCGAAGCTGTTCGCCGCCGATCGCTGCCGAATGGTCCTTCTTCATTCTATTCTATACTTAGTTTTACTGCCATTTGCAATGCTCTGTTTGTTCACCTGCAACACTATTTGCATTCATTCTTGAGAATAAGAAATGATGATGATTTCCAACCGTTTGATCATTGTTGGAAAATGTTGATGCACAAACTACTACTTGACTTGTATGTTACTGTAAGGTTTTCAATTTGTAACTTTGCTTCAGGTTAGAGATGGCTCAAAATCTGCTACAAGGAGATGAGGACTTTTAG

mRNA sequence

ATGAATCCGAGTTATATCGTAAATGTGCCAAAAATTGAGGGTTTAAGTCCTTTTCCTTTCCCTCCCATTCTGTCGAGCTCTTCTTCGTCGTCTCCGGGTACCAACGTCGTTCCCGGCCGTTCTCCTCCAACCCGAAGCTGTTCGCCGCCGATCGCTGCCGAATGGTTAGAGATGGCTCAAAATCTGCTACAAGGAGATGAGGACTTTTAG

Coding sequence (CDS)

ATGAATCCGAGTTATATCGTAAATGTGCCAAAAATTGAGGGTTTAAGTCCTTTTCCTTTCCCTCCCATTCTGTCGAGCTCTTCTTCGTCGTCTCCGGGTACCAACGTCGTTCCCGGCCGTTCTCCTCCAACCCGAAGCTGTTCGCCGCCGATCGCTGCCGAATGGTTAGAGATGGCTCAAAATCTGCTACAAGGAGATGAGGACTTTTAG

Protein sequence

MNPSYIVNVPKIEGLSPFPFPPILSSSSSSSPGTNVVPGRSPPTRSCSPPIAAEWLEMAQNLLQGDEDF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..42

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G00810.1Clc02G00810.1mRNA