Clc02G00730 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G00730
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	RING-type E3 ubiquitin transferase
Location	ClcChr02: 673617 .. 677482 (+)
RNA-Seq Expression	Clc02G00730
Synteny	Clc02G00730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTCCAACAAACATTCAAAATCCCAAAGAAAAGGAAAGAAAAAATGTCAGCTGCTTCCATCTCCACTCCTCATCACCTCATTCATCACGAAGAGTTTTATTCTTCCAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCGCCACCCCTCCCTCCGCCCTCCACGACCAAACTGAATTCTACTCCGGTAGCGGCGGAGACACCACCTTCGACACCAATGTCGTCATGGTCCTCTCCGTTCTCCTCTGCGCCTTAATATGCTCCTTAGGCCTCAACTCCATCATCAGATGCGCTTTGAAATGCTCCCGTTTCGTCGTCTCCGACGACCGCCGCCGCCCCTCCTCCGCCACCCCCGCCTCCACCGGAGTCCACAAGAAGGCCATCAAAAGCTTCACCGTTGTTCAATTCTCGCCGGAACTCAACCTCCCCGGCCTAGACTCCGAGTGCGTCATTTGCCTGTCGGAGTTCGCCGCCGGCGAGAAGCTCCGGCTGCTCCCGAAATGCAACCATGGGTTCCATGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCGGTGTTTAGTCCAGACTTGTCAGAAAATCGCCGGCGTCGCCTCCGCCTCCGCTTCTGCACCGCCGCCTGCGGTTGTCAACTTAGCGCCGCTGGATCCCGAAGCTCCGGTACGGAATTTACGGCTGTAATGGATGACAAATACGAATTAGGCGAAATTATTTAGAGTTTAATTAAAGTTTAAGGAAATTGTATATATTTTTGTTTAATTTTTCCTTCATCATTTTCTCTTCTTCCTTCACTTCTCTCTCTTTTTTAGTTATAAATTGGAAAATTATTCAATCAAATTTGTGTGTCTAATCTGTCTTCCAACTCTTAAAATTATAAATTTAATCTTCAAGTTTTAAATTTTTTAAAATTTATGAACTTCACGCAAAATTTAAAATAATTTGGCCAAGTTCTTTAGATGTATAATTCAAATTTAGATGTAATACAACAATTAATTCTTAAATTTTTTTAATTTGTTTGAGACTTATTAAATAAAGAAGTTAAAAGATGTATTAGATCAAATTAAAAGTCTAGGATGGATTGTAACATTTTGACACTATAGAAATCCTAATAGACACAAACTTTGTAGTTTAACTCCTATCTAGTAACCATTTTGTTTTTAATTTTTAGTTTTTAAAAATTAAATCTATTTCTTTACATTTTTCTTACCATTGTTTACATTTTTTTTTAGTAAAATAGTTGAATTATTAGTCAAATTTTAAAAAAAAAAAAAAACAAAATTTTAAAGACTATTTTTAGTTTTTAAAATTTGGGCTGATCCTTTAAAACATGATAAAAAGTAGATGAAAAATAAGAAATTTAGAATTATAAGAGATATTTGTGAGCTTAATTTTAAAGAATTAAATTTGTGATTTACTTTTTTCTTTATTGAATGAAAACAAAAGGAGAAATTAGTTTTCGGCCACAATTATTTTCTTCAATTCTTTCTCACAAATTCTAATAATTTTCCAATAATTTTATTTTATGAATAAAATTAGATTCAAATTGATTATATCTGGGGGAAGTAATAAATTTTTATTGGGAGGCAGAACATTTTACATTATAGCTTTTTAAATAAATAACATTTTAGATTAAGATTTAGTGGAGAAATTAGACAGAAAAAAACTTACAAATTTTAACCAATTTATTTGCTCTCTACATTTAACTTTATCAATTTATATAACTAATGTTGGAGGAGTTTGAGGTTAATTATTTTTATGGTTCATGAGAAGTGGAGTTTTTAAATATTATTTTAATGATAATGCTTTGAATTATGTGACGACAATTATATTTGACTTCTATATTTTCTTATATTTTTTTAATCTGATCTGATTAGAATACAAAAAATAATTGCATGTGTACACTGTTTCATCCCACTTATTAAATTATAATGAGTTCTAAGATGGTGTTTGGTTTTGACCCATTTCTTTCAATTTAATTCTCATCAAATCAAAATGTTGGAAAATGTGCATCTATTTGAAAAATAAATAAAAATATGAGCTGAGTTTTTTTTTTTTTTTTTAAATAATAAATAAATCAAGTTCCATGTAGCTAGTTACATTTTAAGGGTAGAAACATCAATACTTGTGCTTTTTAAAGTTTTAAAATTTTGATTGAGACATCAAAAAGCACTTTAATATAAAAACAATAAAGATGTTCATTTCTTAAAAATAAAAAATAACGATTTCATCAATTATGAAATCATAAATCAACCAACAACAAGTTGTAACGCCTAGAGTTTTAGAGGGGATATAAATGACCCGAATTCAAATCTGAATGACAAAGATTTTAAGAATATAAAAGTATGAAAAAGAAAGATTTAAAAAATTAAAAAATATTACTTATATCAACAAAGTGTACTTTTCTTTTTAAGTGACTCAATCATAGAAACTTCAAAGTTAAACATGTTTCGCTTAAACAATTCTATGTTGGGTGATTTCTTGAGAATTTTTCTAAGGAGTATGTGAGTGAGGATAAAACATCTTGAAATTACTTGTGTTGGTTTACGATGATATAAATAGAATAGTCTTCACTCTTAAAAGTAGTTGATAAATAATTTGATCATATTTTATTTCAAAAATAGGTGAATACTATTTTGAAAATGAAACTTAAAAATAAAAATATATATGTTAGAAAAAAAAAAAAGAAAAAAAAGAAAGAAAAGAAGAAGATTAGATTAAAATAAAAAGAAAAATAGAAAGGCACTTTGAATAAATGGGAGATGAGGGGGAGAGCACTAATTAATAAATGAAATGAAGTAGGGGGCTACATTAATTGCATCAAAAGGAAAATTTTGTACCATTTGTAATTGGTTTTGGTTAGGGAACATTGGGGCCATTACCCTTATCATTTGACCAACAACACAACAATTAACTCAACTCTATACAATTGGACACCCACCCTGGGATTCATCATAACTATAAATCCTCCTAATTCATTCTTTTACATAAATATTATTAATTATACCAAAAAAAAAAATAATTTAACCAATTACGTTAAATAAAACCTGAATGACAATTATCATTTTTTAATTTCATTATGGGGATGCTTAAAATTGATAAAAATTAAATATGTCAAATTATTGCAATTAGCCTAATGAAAGATGTCTATTTGTTTTTGTTTTTGTTTTTTTTGTTTGTTTTTTTTTTTTTTTTTTTGTCATATTGTTGCTAATTTCTTATTTAGATGCTCACGAGAAATGAAATGAAAATTGGGTTAACCCTGACATCCGTAGATGGCAACCGAAGCGCACAAGCAAGTCCCCTCGACACTTCGTCGAGACTCCTTCGCCCCTGGGCTGCCTTTTCAATCAATCTCCGGCCGCTCATTGCCCGCAGGGAAACAAGCCATTAGCCCACACTGCGTCAGAAAATCTTCGTCTTCGATCTCTCTTCACAACGCTCGTCCCCTCAAGCATCTTGCTTGGAAAAAATCGTTGCCGAAGAGCCTAGACCGGTCGGTAATGCCCGAGAGAGAATTTCCACTATCCATTCCGAGTTGTTATGAATCGATTCCAATATCTCCAAGTTGAAAAAAGAATCGAATATTCATTGATCAAATCATTTGAGAGGAAGATGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTATTTCTAGGCTAATTCAGTGTCTTGTGAATGCTATCTATGAGCATAACTATTTAGTGTGTTATGTCCTTATAATTTTATTTATTTACTTTAGTTTGTTCATTTTCTCAACACAACCAAGTTTTTTTCAATTTTTTTCCTTACCAAGGGCTGGAAATTTTCAAATACAATGTAATTGTGT

mRNA sequence

CAAAATTCCAACAAACATTCAAAATCCCAAAGAAAAGGAAAGAAAAAATGTCAGCTGCTTCCATCTCCACTCCTCATCACCTCATTCATCACGAAGAGTTTTATTCTTCCAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCGCCACCCCTCCCTCCGCCCTCCACGACCAAACTGAATTCTACTCCGGTAGCGGCGGAGACACCACCTTCGACACCAATGTCGTCATGGTCCTCTCCGTTCTCCTCTGCGCCTTAATATGCTCCTTAGGCCTCAACTCCATCATCAGATGCGCTTTGAAATGCTCCCGTTTCGTCGTCTCCGACGACCGCCGCCGCCCCTCCTCCGCCACCCCCGCCTCCACCGGAGTCCACAAGAAGGCCATCAAAAGCTTCACCGTTGTTCAATTCTCGCCGGAACTCAACCTCCCCGGCCTAGACTCCGAGTGCGTCATTTGCCTGTCGGAGTTCGCCGCCGGCGAGAAGCTCCGGCTGCTCCCGAAATGCAACCATGGGTTCCATGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCGGTGTTTAGTCCAGACTTGTCAGAAAATCGCCGGCGTCGCCTCCGCCTCCGCTTCTGCACCGCCGCCTGCGGTTGTCAACTTAGCGCCGCTGGATCCCGAAGCTCCGATGCTCACGAGAAATGAAATGAAAATTGGGTTAACCCTGACATCCGTAGATGGCAACCGAAGCGCACAAGCAAGTCCCCTCGACACTTCGTCGAGACTCCTTCGCCCCTGGGCTGCCTTTTCAATCAATCTCCGGCCGCTCATTGCCCGCAGGGAAACAAGCCATTAGCCCACACTGCGTCAGAAAATCTTCGTCTTCGATCTCTCTTCACAACGCTCGTCCCCTCAAGCATCTTGCTTGGAAAAAATCGTTGCCGAAGAGCCTAGACCGGTCGGTAATGCCCGAGAGAGAATTTCCACTATCCATTCCGAGTTGTTATGAATCGATTCCAATATCTCCAAGTTGAAAAAAGAATCGAATATTCATTGATCAAATCATTTGAGAGGAAGATGCTTGGCCCCTCTTCATTCTCTACAGGGTTCCAAACCTATTTCTAGGCTAATTCAGTGTCTTGTGAATGCTATCTATGAGCATAACTATTTAGTGTGTTATGTCCTTATAATTTTATTTATTTACTTTAGTTTGTTCATTTTCTCAACACAACCAAGTTTTTTTCAATTTTTTTCCTTACCAAGGGCTGGAAATTTTCAAATACAATGTAATTGTGT

Coding sequence (CDS)

ATGTCAGCTGCTTCCATCTCCACTCCTCATCACCTCATTCATCACGAAGAGTTTTATTCTTCCAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCGCCACCCCTCCCTCCGCCCTCCACGACCAAACTGAATTCTACTCCGGTAGCGGCGGAGACACCACCTTCGACACCAATGTCGTCATGGTCCTCTCCGTTCTCCTCTGCGCCTTAATATGCTCCTTAGGCCTCAACTCCATCATCAGATGCGCTTTGAAATGCTCCCGTTTCGTCGTCTCCGACGACCGCCGCCGCCCCTCCTCCGCCACCCCCGCCTCCACCGGAGTCCACAAGAAGGCCATCAAAAGCTTCACCGTTGTTCAATTCTCGCCGGAACTCAACCTCCCCGGCCTAGACTCCGAGTGCGTCATTTGCCTGTCGGAGTTCGCCGCCGGCGAGAAGCTCCGGCTGCTCCCGAAATGCAACCATGGGTTCCATGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGCCGGTGTTTAGTCCAGACTTGTCAGAAAATCGCCGGCGTCGCCTCCGCCTCCGCTTCTGCACCGCCGCCTGCGGTTGTCAACTTAGCGCCGCTGGATCCCGAAGCTCCGATGCTCACGAGAAATGAAATGAAAATTGGGTTAACCCTGACATCCGTAGATGGCAACCGAAGCGCACAAGCAAGTCCCCTCGACACTTCGTCGAGACTCCTTCGCCCCTGGGCTGCCTTTTCAATCAATCTCCGGCCGCTCATTGCCCGCAGGGAAACAAGCCATTAG

Protein sequence

MSAASISTPHHLIHHEEFYSSRKLLLHSSLHKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAGVASASASAPPPAVVNLAPLDPEAPMLTRNEMKIGLTLTSVDGNRSAQASPLDTSSRLLRPWAAFSINLRPLIARRETSH

Homology

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BLAST of Clc02G00730 vs. NCBI nr
Match: XP_038901957.1 (RING-H2 finger protein ATL78-like [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 5.0e-97
Identity = 187/218 (85.78%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MSAASISTPHHLIHHEEFYSSRKLLLHSSLHKLSFTATPPSALHDQTEFYSG-SGGDTTF 60
           MSAASIST     H+EEF+ SRKLLLH SLHKLSFTA  PS LHDQ+EFYSG S GDTTF
Sbjct: 1   MSAASISTS----HYEEFHYSRKLLLHPSLHKLSFTAAAPSTLHDQSEFYSGSSSGDTTF 60

Query: 61  DTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKS 120
           DTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFV+SDD RR SS  PASTGVHKKAIKS
Sbjct: 61  DTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVISDDGRRSSSTAPASTGVHKKAIKS 120

Query: 121 FTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFSP LNLPGLDSECVICLS+FAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSPNLNLPGLDSECVICLSDFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RRCLVQTCQKIAGVASASASAPPPAVVNLAPLDPEAPM 218
           R+CLV TCQKIAGVA+AS S PPPAVV +APLD EAP+
Sbjct: 181 RQCLVHTCQKIAGVATASGSPPPPAVVGIAPLDHEAPV 214

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BLAST of Clc02G00730 vs. NCBI nr
Match: XP_008460910.1 (PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo] >KAA0040778.1 RING-H2 finger protein ATL78-like [Cucumis melo var. makuwa] >TYK02094.1 RING-H2 finger protein ATL78-like [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.6e-87
Identity = 179/231 (77.49%), Postives = 192/231 (83.12%), Query Frame = 0


Query: 1   MSAASISTPHHLIHHEEFYSSRKLLLHSSLHKLSFTATPPSALHDQTEFYSGSGGDTTFD 60
           MS A+IST    IHHE F  SRKLLLHSSLHKLSFTA  PSA+HDQ+EFYSG G  TTFD
Sbjct: 1   MSIATISTN---IHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSG-GDSTTFD 60

Query: 61  TNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKSF 120
           TNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D RR     P STGVHKKAIKSF
Sbjct: 61  TNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRR--HPAPTSTGVHKKAIKSF 120

Query: 121 TVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
           TVVQFSP+LNLPGLDSECVICLSEF  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR
Sbjct: 121 TVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180

Query: 181 RCLVQTCQKIAGV-ASASASA-------------PPPAVVNLAPLDPEAPM 218
           +CLVQTC+KIAGV ASASAS+             PP  VVNLAPL+PEAP+
Sbjct: 181 QCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPV 225

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BLAST of Clc02G00730 vs. NCBI nr
Match: XP_004147380.1 (RING-H2 finger protein ATL78 [Cucumis sativus] >KGN62136.1 hypothetical protein Csa_006555 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 5.8e-85
Identity = 177/234 (75.64%), Postives = 191/234 (81.62%), Query Frame = 0


Query: 1   MSAASISTPHHLIH-HEEFYSSRKLLLHSSLHKLSFTAT---PPSALHDQTEFYSGSGGD 60
           MS ASIST +     H+ F+ SRKLLLHSSLHKLSFT T   PPSA+HDQ+EFYSG G  
Sbjct: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSG-GDS 60

Query: 61  TTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKA 120
           TTFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS+D R     TP STGVHKKA
Sbjct: 61  TTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRH--RLTPTSTGVHKKA 120

Query: 121 IKSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSC 180
           IKSFTVVQFS +LNLPGLD ECVICLSEFA G+KLRLLPKCNHGFHVKCIDKWLSSHSSC
Sbjct: 121 IKSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSC 180

Query: 181 PKCRRCLVQTCQKIAGVASASASA-------------PPPAVVNLAPLDPEAPM 218
           PKCR+CLVQTC+KIAGVASASASA             PP  VV+LAPL+PEAP+
Sbjct: 181 PKCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPV 231

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BLAST of Clc02G00730 vs. NCBI nr
Match: XP_023512393.1 (RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo] >XP_023522416.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 7.8e-82
Identity = 172/218 (78.90%), Postives = 180/218 (82.57%), Query Frame = 0


Query: 1   MSAASISTPHHLIHH--EEFYSSRKLLLHSSLHKLSFTA-TPPSALHDQTEFYSGSGGDT 60
           MSA SIS+PH LIHH  + FY SRKLLLHSSLH L+FTA  P S LH   E Y       
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------- 60

Query: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAI 120
           TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD   PSS T A  GVHKKAI
Sbjct: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD-PHPSSTTSAPVGVHKKAI 120

Query: 121 KSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFSP+LNLPGLDSECVICLS+F  GEKLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTMVQFSPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRRCLVQTCQKIAGVASASASAPPPAVVNLAPLDPEA 216
           KCR+CLVQT QKIAGV S  AS PPPA +NL PLDPEA
Sbjct: 181 KCRQCLVQTSQKIAGV-SGPASPPPPA-INLTPLDPEA 208

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BLAST of Clc02G00730 vs. NCBI nr
Match: XP_022927999.1 (RING-H2 finger protein ATL78-like [Cucurbita moschata])

HSP 1 Score: 312.4 bits (799), Expect = 3.9e-81
Identity = 168/218 (77.06%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MSAASISTPHHLIHH--EEFYSSRKLLLHSSLHKLSFTA-TPPSALHDQTEFYSGSGGDT 60
           MSA SIS+PH LIHH  + FY SRKLLLHSSLH L+FTA  P S LH   E Y       
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------- 60

Query: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAI 120
           TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD   PSS T A  GVHKKAI
Sbjct: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD-THPSSTTAAPVGVHKKAI 120

Query: 121 KSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFS +LNLPGLDSECVICLS+F  GEKLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRRCLVQTCQKIAGVASASASAPPPAVVNLAPLDPEA 216
           KCR+CLVQT QKIAGV     ++PPP  +NLAPLDPEA
Sbjct: 181 KCRQCLVQTSQKIAGV--GGPTSPPPPAINLAPLDPEA 208

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BLAST of Clc02G00730 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-53
Identity = 114/199 (57.29%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 21  SRKLLLHSSLHKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALICSLGL 80
           SRKLL H+  H  S T  P           S   GD  FD NVVMVLSVLLCAL+CSLGL
Sbjct: 27  SRKLLFHT--HDQSPTPAP-----------SPYVGDNNFDANVVMVLSVLLCALVCSLGL 86

Query: 81  NSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKSFTVVQFSPELNLPGLDSECVI 140
           NSIIRCAL+CS  V S+           +TGV +KA+KSF  V +S ELNLPGLD+EC I
Sbjct: 87  NSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAI 146

Query: 141 CLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAGVASASA-- 200
           CLSEF A E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QTC+KIA  +  S+  
Sbjct: 147 CLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLN 206

Query: 201 SAPPP---AVVNLAPLDPE 215
           S  PP    ++ +APL+PE
Sbjct: 207 STQPPQDSIILQIAPLEPE 212

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BLAST of Clc02G00730 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.2e-46
Identity = 104/203 (51.23%), Postives = 133/203 (65.52%), Query Frame = 0


Query: 19  YSSRKLLLHSSL--HKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALIC 78
           + SRKLLLH+    +     A  PS L       SG         NV+M+LS+L+C +IC
Sbjct: 21  FVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG---------NVMMLLSILICGIIC 80

Query: 79  SLGLNSIIRCALKCS-RFVVSDDRRRPSSATPAST-GVHKKAIKSFTVVQFSPELNLPGL 138
            LGL+ IIRCAL+ S RF++S+     SS   +S  G+ KKA++ F VV +SPE+NLPGL
Sbjct: 81  CLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGL 140

Query: 139 DSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAG-- 198
           D ECVICLS+F +GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  
Sbjct: 141 DEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDF 200

Query: 199 --VASASASAPPPAVVNLAPLDP 214
               S +A      +V + PL+P
Sbjct: 201 SQADSVTAEPTEIVIVTIVPLEP 214

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BLAST of Clc02G00730 vs. ExPASy Swiss-Prot
Match: Q6NML0 (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-45
Identity = 107/214 (50.00%), Postives = 138/214 (64.49%), Query Frame = 0


Query: 19  YSSRKLLLHSSL--HKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALIC 78
           + +RKLLLH     + L   A  PS L        G         NV+M+LSVL+C +IC
Sbjct: 21  FVTRKLLLHDPFDHNSLRVFAVAPSPLITHENNLKG---------NVLMLLSVLICGIIC 80

Query: 79  SLGLNSIIRCAL-KCSRFVVSDDRRRPSSATPAST---GVHKKAIKSFTVVQFSPELNLP 138
            LGL+ IIRCA  + SRF++S+     S +TP S+   G+ KKA++ F VV +S E+NLP
Sbjct: 81  CLGLHYIIRCAFRRSSRFMISEP--ISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLP 140

Query: 139 GLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAG 198
           G+  ECVICLS+F +GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G
Sbjct: 141 GIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILG 200

Query: 199 ---VASASASAPPPAV-VNLAPLDPEAPMLTRNE 223
               A + AS P  +V V + PL+PE  + T  E
Sbjct: 201 DFSQADSMASTPTESVIVRIDPLEPEGRVNTFRE 223

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BLAST of Clc02G00730 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.1e-45
Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 0


Query: 62  NVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDDRRRPSSATPAST--GVHKKAIK 121
           NV+M+LS+LLC +ICSLGL+ IIRCA   SR F++SD    PS+   +S   G+ KKA+K
Sbjct: 51  NVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALK 110

Query: 122 SFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPK 181
              VV +SPE+NLPG+  ECVICLS+F AGE+LR+LPKCNHGFH++CIDKWL+ H +CPK
Sbjct: 111 MLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPK 170

Query: 182 CRRCLVQTCQKIAGVASA----SASAPPPAVVNLAPLDPEAPMLTRNE 223
           CR CLV TCQK+     A    +A+A     + ++PL+PEA + T  E
Sbjct: 171 CRHCLVDTCQKVLSDCDAADQVAATATESIDIRISPLEPEARVATFRE 218

[Close]

BLAST of Clc02G00730 vs. ExPASy Swiss-Prot
Match: Q94BY6 (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-44
Identity = 102/204 (50.00%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 19  YSSRKLLLHSSL--HKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALIC 78
           + SRKLLLH+    +     A  PS L       SG         NV+M+LSVL+C +IC
Sbjct: 22  FVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG---------NVLMLLSVLICGIIC 81

Query: 79  SLGLNSIIRCAL-KCSRFVVSDDRRRPSSATPAST-GVHKKAIKSFTVVQFSPELNLPGL 138
            LGL+ IIRCA  + S F++S+     S+   +S  G++KKA++ F VV +SPE+NLPGL
Sbjct: 82  CLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGL 141

Query: 139 DSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAGVA 198
             ECVICLS+F +GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  
Sbjct: 142 GEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDF 201

Query: 199 SAS--ASAPPPA--VVNLAPLDPE 215
           S +   +A P A  +V +APL+PE
Sbjct: 202 SQADQVAATPTASVIVRIAPLEPE 216

[Close]

BLAST of Clc02G00730 vs. ExPASy TrEMBL
Match: A0A5A7TCX2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00810 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.9e-88
Identity = 179/231 (77.49%), Postives = 192/231 (83.12%), Query Frame = 0


Query: 1   MSAASISTPHHLIHHEEFYSSRKLLLHSSLHKLSFTATPPSALHDQTEFYSGSGGDTTFD 60
           MS A+IST    IHHE F  SRKLLLHSSLHKLSFTA  PSA+HDQ+EFYSG G  TTFD
Sbjct: 1   MSIATISTN---IHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSG-GDSTTFD 60

Query: 61  TNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKSF 120
           TNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D RR     P STGVHKKAIKSF
Sbjct: 61  TNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRR--HPAPTSTGVHKKAIKSF 120

Query: 121 TVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
           TVVQFSP+LNLPGLDSECVICLSEF  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR
Sbjct: 121 TVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180

Query: 181 RCLVQTCQKIAGV-ASASASA-------------PPPAVVNLAPLDPEAPM 218
           +CLVQTC+KIAGV ASASAS+             PP  VVNLAPL+PEAP+
Sbjct: 181 QCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPV 225

[Close]

BLAST of Clc02G00730 vs. ExPASy TrEMBL
Match: A0A1S3CDJ3 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.9e-88
Identity = 179/231 (77.49%), Postives = 192/231 (83.12%), Query Frame = 0


Query: 1   MSAASISTPHHLIHHEEFYSSRKLLLHSSLHKLSFTATPPSALHDQTEFYSGSGGDTTFD 60
           MS A+IST    IHHE F  SRKLLLHSSLHKLSFTA  PSA+HDQ+EFYSG G  TTFD
Sbjct: 1   MSIATISTN---IHHEVFRYSRKLLLHSSLHKLSFTAAAPSAVHDQSEFYSG-GDSTTFD 60

Query: 61  TNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKSF 120
           TNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D RR     P STGVHKKAIKSF
Sbjct: 61  TNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRR--HPAPTSTGVHKKAIKSF 120

Query: 121 TVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180
           TVVQFSP+LNLPGLDSECVICLSEF  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR
Sbjct: 121 TVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCR 180

Query: 181 RCLVQTCQKIAGV-ASASASA-------------PPPAVVNLAPLDPEAPM 218
           +CLVQTC+KIAGV ASASAS+             PP  VVNLAPL+PEAP+
Sbjct: 181 QCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPV 225

[Close]

BLAST of Clc02G00730 vs. ExPASy TrEMBL
Match: A0A0A0LQ73 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.8e-85
Identity = 177/234 (75.64%), Postives = 191/234 (81.62%), Query Frame = 0


Query: 1   MSAASISTPHHLIH-HEEFYSSRKLLLHSSLHKLSFTAT---PPSALHDQTEFYSGSGGD 60
           MS ASIST +     H+ F+ SRKLLLHSSLHKLSFT T   PPSA+HDQ+EFYSG G  
Sbjct: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSG-GDS 60

Query: 61  TTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKA 120
           TTFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS+D R     TP STGVHKKA
Sbjct: 61  TTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRH--RLTPTSTGVHKKA 120

Query: 121 IKSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSC 180
           IKSFTVVQFS +LNLPGLD ECVICLSEFA G+KLRLLPKCNHGFHVKCIDKWLSSHSSC
Sbjct: 121 IKSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSC 180

Query: 181 PKCRRCLVQTCQKIAGVASASASA-------------PPPAVVNLAPLDPEAPM 218
           PKCR+CLVQTC+KIAGVASASASA             PP  VV+LAPL+PEAP+
Sbjct: 181 PKCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPV 231

[Close]

BLAST of Clc02G00730 vs. ExPASy TrEMBL
Match: A0A6J1I2P6 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111470371 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.9e-81
Identity = 169/218 (77.52%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MSAASISTPHHLIHH--EEFYSSRKLLLHSSLHKLSFTA-TPPSALHDQTEFYSGSGGDT 60
           MSAASIS+PH LIHH  + FY SRKLLLHSSL  LSFTA  P S LH   E Y       
Sbjct: 1   MSAASISSPHQLIHHGDQVFYYSRKLLLHSSLRTLSFTADAPSSVLHRPLESY------- 60

Query: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAI 120
           TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD   PSS T A  GVHKKAI
Sbjct: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD-PHPSSNTSAPIGVHKKAI 120

Query: 121 KSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQF+P+LNLPGLDSECVICLS+F  GEKLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTMVQFTPDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRRCLVQTCQKIAGVASASASAPPPAVVNLAPLDPEA 216
           KCR+CLVQT QKIAGV     ++PPP  +NLAPLDPEA
Sbjct: 181 KCRQCLVQTSQKIAGV--GGPTSPPPPAINLAPLDPEA 208

[Close]

BLAST of Clc02G00730 vs. ExPASy TrEMBL
Match: A0A6J1EJK6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.9e-81
Identity = 168/218 (77.06%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MSAASISTPHHLIHH--EEFYSSRKLLLHSSLHKLSFTA-TPPSALHDQTEFYSGSGGDT 60
           MSA SIS+PH LIHH  + FY SRKLLLHSSLH L+FTA  P S LH   E Y       
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------- 60

Query: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAI 120
           TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD   PSS T A  GVHKKAI
Sbjct: 61  TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD-THPSSTTAAPVGVHKKAI 120

Query: 121 KSFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFS +LNLPGLDSECVICLS+F  GEKLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRRCLVQTCQKIAGVASASASAPPPAVVNLAPLDPEA 216
           KCR+CLVQT QKIAGV     ++PPP  +NLAPLDPEA
Sbjct: 181 KCRQCLVQTSQKIAGV--GGPTSPPPPAINLAPLDPEA 208

[Close]

BLAST of Clc02G00730 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-54
Identity = 114/199 (57.29%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 21  SRKLLLHSSLHKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALICSLGL 80
           SRKLL H+  H  S T  P           S   GD  FD NVVMVLSVLLCAL+CSLGL
Sbjct: 27  SRKLLFHT--HDQSPTPAP-----------SPYVGDNNFDANVVMVLSVLLCALVCSLGL 86

Query: 81  NSIIRCALKCSRFVVSDDRRRPSSATPASTGVHKKAIKSFTVVQFSPELNLPGLDSECVI 140
           NSIIRCAL+CS  V S+           +TGV +KA+KSF  V +S ELNLPGLD+EC I
Sbjct: 87  NSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAI 146

Query: 141 CLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAGVASASA-- 200
           CLSEF A E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QTC+KIA  +  S+  
Sbjct: 147 CLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLN 206

Query: 201 SAPPP---AVVNLAPLDPE 215
           S  PP    ++ +APL+PE
Sbjct: 207 STQPPQDSIILQIAPLEPE 212

[Close]

BLAST of Clc02G00730 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-47
Identity = 104/203 (51.23%), Postives = 133/203 (65.52%), Query Frame = 0


Query: 19  YSSRKLLLHSSL--HKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALIC 78
           + SRKLLLH+    +     A  PS L       SG         NV+M+LS+L+C +IC
Sbjct: 21  FVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG---------NVMMLLSILICGIIC 80

Query: 79  SLGLNSIIRCALKCS-RFVVSDDRRRPSSATPAST-GVHKKAIKSFTVVQFSPELNLPGL 138
            LGL+ IIRCAL+ S RF++S+     SS   +S  G+ KKA++ F VV +SPE+NLPGL
Sbjct: 81  CLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGL 140

Query: 139 DSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAG-- 198
           D ECVICLS+F +GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  
Sbjct: 141 DEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDF 200

Query: 199 --VASASASAPPPAVVNLAPLDP 214
               S +A      +V + PL+P
Sbjct: 201 SQADSVTAEPTEIVIVTIVPLEP 214

[Close]

BLAST of Clc02G00730 vs. TAIR 10
Match: AT1G49210.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-46
Identity = 107/214 (50.00%), Postives = 138/214 (64.49%), Query Frame = 0


Query: 19  YSSRKLLLHSSL--HKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALIC 78
           + +RKLLLH     + L   A  PS L        G         NV+M+LSVL+C +IC
Sbjct: 21  FVTRKLLLHDPFDHNSLRVFAVAPSPLITHENNLKG---------NVLMLLSVLICGIIC 80

Query: 79  SLGLNSIIRCAL-KCSRFVVSDDRRRPSSATPAST---GVHKKAIKSFTVVQFSPELNLP 138
            LGL+ IIRCA  + SRF++S+     S +TP S+   G+ KKA++ F VV +S E+NLP
Sbjct: 81  CLGLHYIIRCAFRRSSRFMISEP--ISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLP 140

Query: 139 GLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAG 198
           G+  ECVICLS+F +GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TCQKI G
Sbjct: 141 GIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILG 200

Query: 199 ---VASASASAPPPAV-VNLAPLDPEAPMLTRNE 223
               A + AS P  +V V + PL+PE  + T  E
Sbjct: 201 DFSQADSMASTPTESVIVRIDPLEPEGRVNTFRE 223

[Close]

BLAST of Clc02G00730 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-46
Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 0


Query: 62  NVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDDRRRPSSATPAST--GVHKKAIK 121
           NV+M+LS+LLC +ICSLGL+ IIRCA   SR F++SD    PS+   +S   G+ KKA+K
Sbjct: 51  NVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALK 110

Query: 122 SFTVVQFSPELNLPGLDSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPK 181
              VV +SPE+NLPG+  ECVICLS+F AGE+LR+LPKCNHGFH++CIDKWL+ H +CPK
Sbjct: 111 MLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPK 170

Query: 182 CRRCLVQTCQKIAGVASA----SASAPPPAVVNLAPLDPEAPMLTRNE 223
           CR CLV TCQK+     A    +A+A     + ++PL+PEA + T  E
Sbjct: 171 CRHCLVDTCQKVLSDCDAADQVAATATESIDIRISPLEPEARVATFRE 218

[Close]

BLAST of Clc02G00730 vs. TAIR 10
Match: AT1G49200.1 (RING/U-box superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 9.6e-46
Identity = 102/204 (50.00%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 19  YSSRKLLLHSSL--HKLSFTATPPSALHDQTEFYSGSGGDTTFDTNVVMVLSVLLCALIC 78
           + SRKLLLH+    +     A  PS L       SG         NV+M+LSVL+C +IC
Sbjct: 22  FVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSG---------NVLMLLSVLICGIIC 81

Query: 79  SLGLNSIIRCAL-KCSRFVVSDDRRRPSSATPAST-GVHKKAIKSFTVVQFSPELNLPGL 138
            LGL+ IIRCA  + S F++S+     S+   +S  G++KKA++ F VV +SPE+NLPGL
Sbjct: 82  CLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGL 141

Query: 139 DSECVICLSEFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRRCLVQTCQKIAGVA 198
             ECVICLS+F +GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TCQKI G  
Sbjct: 142 GEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDF 201

Query: 199 SAS--ASAPPPA--VVNLAPLDPE 215
           S +   +A P A  +V +APL+PE
Sbjct: 202 SQADQVAATPTASVIVRIAPLEPE 216

The following BLAST results are available for this feature:

BLAST of Clc02G00730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901957.1	5.0e-97	85.78	RING-H2 finger protein ATL78-like [Benincasa hispida]	[more]
XP_008460910.1	1.6e-87	77.49	PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo] >KAA0040778.1 RING-H...	[more]
XP_004147380.1	5.8e-85	75.64	RING-H2 finger protein ATL78 [Cucumis sativus] >KGN62136.1 hypothetical protein ...	[more]
XP_023512393.1	7.8e-82	78.90	RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo] >XP_023522416.1 R...	[more]
XP_022927999.1	3.9e-81	77.06	RING-H2 finger protein ATL78-like [Cucurbita moschata]	[more]

BLAST of Clc02G00730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQG7	3.5e-53	57.29	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
P0C034	3.2e-46	51.23	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q6NML0	4.6e-45	50.00	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 ...	[more]
Q9LS99	6.1e-45	54.76	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]
Q94BY6	1.4e-44	50.00	RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1	[more]

BLAST of Clc02G00730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TCX2	7.9e-88	77.49	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CDJ3	7.9e-88	77.49	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 ...	[more]
A0A0A0LQ73	2.8e-85	75.64	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE...	[more]
A0A6J1I2P6	1.9e-81	77.52	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111470371 P...	[more]
A0A6J1EJK6	1.9e-81	77.06	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900...	[more]

BLAST of Clc02G00730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49230.1	2.5e-54	57.29	RING/U-box superfamily protein	[more]
AT1G49220.1	2.3e-47	51.23	RING/U-box superfamily protein	[more]
AT1G49210.1	3.3e-46	50.00	RING/U-box superfamily protein	[more]
AT3G18773.1	4.3e-46	54.76	RING/U-box superfamily protein	[more]
AT1G49200.1	9.6e-46	50.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 138..179 e-value: 2.5E-7 score: 40.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 137..180 e-value: 7.7E-14 score: 51.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 138..180 score: 12.267982
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 97..185 e-value: 1.5E-21 score: 77.8
None	No IPR available	PANTHER	PTHR46905:SF7	RING-H2 FINGER PROTEIN ATL78	coord: 7..219
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 137..180 e-value: 1.40324E-16 score: 69.6381
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 116..185
IPR044602	RING-H2 finger protein ATL10/ATL75-79	PANTHER	PTHR46905	RING-H2 FINGER PROTEIN ATL78	coord: 7..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G00730.1	Clc02G00730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity