Clc01G22430 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G22430
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Autophagy-related protein
Location	ClcChr01: 33588970 .. 33590932 (-)
RNA-Seq Expression	Clc01G22430
Synteny	Clc01G22430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTAATACGTGTTTGAAGTGGAAAGAGCTTCGTTTATCTACGAAACACACGAGTCATGATCATCTACTCTCTGTTTTTAAATTCTCCTTTCGTATTATCCAATTCTTCTCATTCTCACTCCTTTTTGCCGATTCATCACTCAAATACTGAATTTCCAGACCCCCTTTTTTGATCTTCTCTTTGACTGGGTATTCCATTGCCATTCCCCTTCGCCTTTCTTCGCCTTTTCACTTTTGATTATGCTTTTGCTATATACCCTTTACCCAACTCTTTGTGGTGTTCTAATGTTTCTCTTTCTTTAAATTTTCAGCCACCAATCGTAGCGTGAGATTCTAATTTCTTCCATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTAGGTAATCATGTATTTTTAGTCTCTCAAAGACGTCATACATATATATATATATATATCGAGAGAGGTTCTACTGAGGACTTGAAACTGGAATAAGATCAGTTCAATTGCTTAGAATTTGATTGATTTTGTGACTTAGTCGGTGACCTTATTTGAATTCGTGTTCCGTTTGTGAGCACCGAGTAGGCGCATGCCTGTTTGGTTTCATGATTGTTTTCATTATTTTTATCCCCCTTTTGACTAATTCTATTTGGTAAAATCTAACAGGCTATAGTCAGCATTATGTGATACTTCATGCTTTAACTATTATTGCTTACTTTATCGGGATCTTCACTTCTCAGAAAAGAGGCAGGCCGAAGCTGCTCGCATTAAAGAAAAGTACCCGGACAGAATACCTGTAAGAATAATGTTACTAATTAAGCTCTCTACTTCGCTTGGTCTCCTAAATTTACTTTGGTTTTGGTACTGATTCAATTAAGTTAATCAGGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGCTGATATTGATAGGAACAAGTACTCTCTCTTTCTCTCTTCTCTTTGTGAATCAGTGGATTAACATGAACAGATGATAAGATGTTATCACATTTTGAACTGATAAATTAAAGTAGATACTACAGGTATGTTAGCAGCAGCTGCAGCAACATGCCGAATGAAAATAAATGGAGTTGCTAGCATGTAGTTTGAACGTGGAGTTCATTAGAAACAGAAGTACCTAAATCAATCCTATGAATTATGGTTTACTTGAAAGATTTCACTGGCTTTCAGATGGTAACCATTGGATTGACCATTGAGTGGTACATGGAAAAAAAAATTCATGAGAGTTGGTCCCAACAAAGCGTGTTATGTTATAGCATTAAATCCGGTCCTGTGATTGATACTTTTATAATTCTGGATAAATCTTGAATATGGAGAAGTATTGTTTTGTTATAAGCACATGGATGATCCTTTTCGGAAGTTGCCAATATTGTATAGTTGAACAGTTCTTTTCATTCAGTGTGGCACTTTTTTATCTTTCCCATTGCAGATATCTCGTCCCCGCGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGTAAACGGATTAAGCTTAGCGCTGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCAACTGGTGAGTGACGACCCTTTTTATCTTAGTCTCTGATCTTGTATTGAATGTAAGCTTTAAAATAAATTCTTCCGTGCAACAGGTGCATTGATGTCTGCAATTTATGCGGATAATAAGGATGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGAACAATGATACATTTCCCTGTAAATTCTAGCTCTGCCCTTCAGATCAATCAATGCATCAGCTTTATGTTCCATTCTATTCTAGTATATTTAAGTTTCCATCAAAGGTGTTGCTCAAGGAGTGGCCCTGAATGTTTTAGTTTTTTTCCCTTCATCAATTGAGACTGTGAACCAATAAAATAGCTATTGGCATCTTTCTAGTTGTATATCAAGCAGCGAAATGATTAAACTTTCTGATC

mRNA sequence

TGCTAATACGTGTTTGAAGTGGAAAGAGCTTCGTTTATCTACGAAACACACGAGTCATGATCATCTACTCTCTGTTTTTAAATTCTCCTTTCGTATTATCCAATTCTTCTCATTCTCACTCCTTTTTGCCGATTCATCACTCAAATACTGAATTTCCAGACCCCCTTTTTTGATCTTCTCTTTGACTGGCCACCAATCGTAGCGTGAGATTCTAATTTCTTCCATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTAGAAAAGAGGCAGGCCGAAGCTGCTCGCATTAAAGAAAAGTACCCGGACAGAATACCTGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGCTGATATTGATAGGAACAAATATCTCGTCCCCGCGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGTAAACGGATTAAGCTTAGCGCTGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCAACTGGTGCATTGATGTCTGCAATTTATGCGGATAATAAGGATGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGAACAATGATACATTTCCCTGTAAATTCTAGCTCTGCCCTTCAGATCAATCAATGCATCAGCTTTATGTTCCATTCTATTCTAGTATATTTAAGTTTCCATCAAAGGTGTTGCTCAAGGAGTGGCCCTGAATGTTTTAGTTTTTTTCCCTTCATCAATTGAGACTGTGAACCAATAAAATAGCTATTGGCATCTTTCTAGTTGTATATCAAGCAGCGAAATGATTAAACTTTCTGATC

Coding sequence (CDS)

ATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTAGAAAAGAGGCAGGCCGAAGCTGCTCGCATTAAAGAAAAGTACCCGGACAGAATACCTGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGCTGATATTGATAGGAACAAATATCTCGTCCCCGCGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGTAAACGGATTAAGCTTAGCGCTGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCAACTGGTGCATTGATGTCTGCAATTTATGCGGATAATAAGGATGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGAACAATGA

Protein sequence

MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGEQ

Homology

[Close]

BLAST of Clc01G22430 vs. NCBI nr
Match: XP_008439996.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_016899344.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >TYK13044.1 autophagy-related protein 8C [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLEKRQAEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. NCBI nr
Match: XP_004134765.1 (autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related protein 8C [Cucumis sativus] >XP_011658147.1 autophagy-related protein 8C [Cucumis sativus] >KGN49109.1 hypothetical protein Csa_003738 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 4.4e-56
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSS KLGIPLEKR AEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. NCBI nr
Match: KAG6603779.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033949.1 Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 114/123 (92.68%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLEKR+AEAAR++EKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. NCBI nr
Match: XP_022950063.1 (autophagy-related protein 8C-like [Cucurbita moschata])

HSP 1 Score: 224.9 bits (572), Expect = 3.7e-55
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLE+R+AEAAR++EKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. NCBI nr
Match: XP_022142105.1 (autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophagy-related protein 8C-like [Momordica charantia])

HSP 1 Score: 222.6 bits (566), Expect = 1.8e-54
Identity = 115/123 (93.50%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLE+RQAEAARI+EKYP+RIPVIVEKAGRSNIADID+NKYLVPADLTVGQ
Sbjct: 1   MARSSFKLGIPLERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 122

[Close]

BLAST of Clc01G22430 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 8.3e-50
Identity = 101/120 (84.17%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKL  PLE+RQAEA RI+EKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIY +NKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of Clc01G22430 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 8.3e-50
Identity = 101/120 (84.17%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKL  PLE+RQAEA RI+EKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIY +NKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of Clc01G22430 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.0e-49
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA+SSFKL  PLE+RQAEAARI+EKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLSAEKAIF+FVK+ LP T A+MSAIY ++KDEDGFLYM+YSGENTFG F
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF 119

[Close]

BLAST of Clc01G22430 vs. ExPASy Swiss-Prot
Match: Q8LEM4 (Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 2.9e-47
Identity = 93/117 (79.49%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA+SSFK+  PLE R +E++RI+EKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Clc01G22430 vs. ExPASy Swiss-Prot
Match: Q8S927 (Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.0e-47
Identity = 94/117 (80.34%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA SSFKL  PLE+RQ E++RI+EKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Clc01G22430 vs. ExPASy TrEMBL
Match: A0A1S3B043 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.0e-58
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLEKRQAEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. ExPASy TrEMBL
Match: A0A5D3CPT6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006460 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.0e-58
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLEKRQAEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. ExPASy TrEMBL
Match: A0A0A0KJW7 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 117/123 (95.12%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSS KLGIPLEKR AEAARI+EKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. ExPASy TrEMBL
Match: A0A6J1GDU9 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLE+R+AEAAR++EKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 123

[Close]

BLAST of Clc01G22430 vs. ExPASy TrEMBL
Match: A0A6J1CL79 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.9e-55
Identity = 115/123 (93.50%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MARSSFKLGIPLE+RQAEAARI+EKYP+RIPVIVEKAGRSNIADID+NKYLVPADLTVGQ
Sbjct: 1   MARSSFKLGIPLERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFL 120

Query: 121 GEQ 124
           G Q
Sbjct: 121 GGQ 122

[Close]

BLAST of Clc01G22430 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-48
Identity = 93/117 (79.49%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA+SSFK+  PLE R +E++RI+EKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Clc01G22430 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-48
Identity = 93/117 (79.49%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA+SSFK+  PLE R +E++RI+EKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFG
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of Clc01G22430 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.6e-48
Identity = 94/117 (80.34%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA SSFKL  PLE+RQ E++RI+EKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Clc01G22430 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.6e-48
Identity = 94/117 (80.34%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA SSFKL  PLE+RQ E++RI+EKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NKDEDGFLYM+YSGENTFG
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of Clc01G22430 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 7.9e-48
Identity = 96/119 (80.67%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRQAEAARIKEKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQ 60
           MA SSFK   PLEKRQAEAARI+EKYPDRIPVIVE+A +S++ DIDR KYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLS EKAIF+FVK+ LP T A+MSAIY ++KDEDGFLYMSYSGENTFG F
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIF 119

The following BLAST results are available for this feature:

BLAST of Clc01G22430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439996.1	1.0e-57	96.75	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED...	[more]
XP_004134765.1	4.4e-56	95.12	autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related...	[more]
KAG6603779.1	1.7e-55	92.68	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022950063.1	3.7e-55	91.87	autophagy-related protein 8C-like [Cucurbita moschata]	[more]
XP_022142105.1	1.8e-54	93.50	autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophag...	[more]

BLAST of Clc01G22430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YS06	8.3e-50	84.17	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	8.3e-50	84.17	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
M1C146	7.0e-49	82.35	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q8LEM4	2.9e-47	79.49	Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2	[more]
Q8S927	5.0e-47	80.34	Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1	[more]

BLAST of Clc01G22430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B043	5.0e-58	96.75	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1	[more]
A0A5D3CPT6	5.0e-58	96.75	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KJW7	2.1e-56	95.12	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1	[more]
A0A6J1GDU9	1.8e-55	91.87	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=...	[more]
A0A6J1CL79	8.9e-55	93.50	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV...	[more]

BLAST of Clc01G22430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21980.1	2.1e-48	79.49	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	2.1e-48	79.49	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	3.6e-48	80.34	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	3.6e-48	80.34	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	7.9e-48	80.67	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..117 e-value: 1.7E-54 score: 185.0
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..117
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 2.73892E-66 score: 193.831
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 1.7E-48 score: 163.1
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G22430.1	Clc01G22430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule