Clc01G19980 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G19980
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	heavy metal-associated isoprenylated plant protein 3-like
Location	ClcChr01: 32060420 .. 32061331 (+)
RNA-Seq Expression	Clc01G19980
Synteny	Clc01G19980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGTACCCAACAAACAAAAAAGACTGTCCAAAGGCTTTATAAAAATGTTCCCATCAATGTATAAATGTCTTCTATTCGAGCATCCCAAGGAAGCTCTATTACTCTTTCCTAATTCCCCATGGCCCAAACCAAAACCGTTCTGAAACTTGACATTGCATGTCAAAAATGCAAGACCAAAGTCCTCAAAGCTGTTACTGCCATAGAAGGTATCTTCTTCTTCTTCTTTTTTTCAGATATTAAATTGGTTGGAATTCGGTTCCATATTTTAATTGAATTACAAGCACTTTTTTTAATTCTTTTTTGAATTTGTAAATTAATTTTGGTTTTAGGCGTGGACAAGGTCGAGACAGACGAAGTCAAGGGGACTCTGGCCGTGACGGGCACTGCGGATCCCTTCGACATCGTTAAACGTACGAGGAAGGCGATTGCTTGCGCCGGTAAGGTTGTCGATGTCGTGACCATTGGACCGCCACCCAAACCGGAGGAGAAGAAACCGGACGACAAAAAACCCGACAACAAAAAACCGGACGACAAGAAACCGGACGACAAGAAGCCCGACCCGCCGCCGGTTTGCCCATGTCCGCCCTACCCCCCTTATTATGGATCGTCCTACATCGTCGTGCCTCGTGAAACCTATCCTTCTTGCACTATTCTTTAATCGGAAGTACAAATTATTTGAGAAATGCTGAAACCAATTTAATGTAATTTGTCTTCTGTCTCTATATCATTATAGGATATGTTTGTAAAATAATTTTAAATTTGTATTTTCTTAATCTTTTATCTTAGCATTGTTAGATTAGAAGGCAGCTACATTAATAAGACCATTTCATCGTGTTTTTTTTTAGTTTTGTTTTGTAATTGGTACTAATAATTAATGAAGAAGCGCCAATCTTTTTTTTTTCTTCTCTCTC

mRNA sequence

CGTGTACCCAACAAACAAAAAAGACTGTCCAAAGGCTTTATAAAAATGTTCCCATCAATGTATAAATGTCTTCTATTCGAGCATCCCAAGGAAGCTCTATTACTCTTTCCTAATTCCCCATGGCCCAAACCAAAACCGTTCTGAAACTTGACATTGCATGTCAAAAATGCAAGACCAAAGTCCTCAAAGCTGTTACTGCCATAGAAGGCGTGGACAAGGTCGAGACAGACGAAGTCAAGGGGACTCTGGCCGTGACGGGCACTGCGGATCCCTTCGACATCGTTAAACGTACGAGGAAGGCGATTGCTTGCGCCGGTAAGGTTGTCGATGTCGTGACCATTGGACCGCCACCCAAACCGGAGGAGAAGAAACCGGACGACAAAAAACCCGACAACAAAAAACCGGACGACAAGAAACCGGACGACAAGAAGCCCGACCCGCCGCCGGTTTGCCCATGTCCGCCCTACCCCCCTTATTATGGATCGTCCTACATCGTCGTGCCTCGTGAAACCTATCCTTCTTGCACTATTCTTTAATCGGAAGTACAAATTATTTGAGAAATGCTGAAACCAATTTAATGTAATTTGTCTTCTGTCTCTATATCATTATAGGATATGTTTGTAAAATAATTTTAAATTTGTATTTTCTTAATCTTTTATCTTAGCATTGTTAGATTAGAAGGCAGCTACATTAATAAGACCATTTCATCGTGTTTTTTTTTAGTTTTGTTTTGTAATTGGTACTAATAATTAATGAAGAAGCGCCAATCTTTTTTTTTTCTTCTCTCTC

Coding sequence (CDS)

ATGGCCCAAACCAAAACCGTTCTGAAACTTGACATTGCATGTCAAAAATGCAAGACCAAAGTCCTCAAAGCTGTTACTGCCATAGAAGGCGTGGACAAGGTCGAGACAGACGAAGTCAAGGGGACTCTGGCCGTGACGGGCACTGCGGATCCCTTCGACATCGTTAAACGTACGAGGAAGGCGATTGCTTGCGCCGGTAAGGTTGTCGATGTCGTGACCATTGGACCGCCACCCAAACCGGAGGAGAAGAAACCGGACGACAAAAAACCCGACAACAAAAAACCGGACGACAAGAAACCGGACGACAAGAAGCCCGACCCGCCGCCGGTTTGCCCATGTCCGCCCTACCCCCCTTATTATGGATCGTCCTACATCGTCGTGCCTCGTGAAACCTATCCTTCTTGCACTATTCTTTAA

Protein sequence

MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRKAIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPYPPYYGSSYIVVPRETYPSCTIL

Homology

[Close]

BLAST of Clc01G19980 vs. NCBI nr
Match: XP_008440757.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51
Identity = 116/140 (82.86%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDE KGTLAVTGTADPF+IVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFEIVKRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPY--PP 120
           AIACAGK+ DVV+IGPPPKP EKKPD+KK  +KKP     D KKP+PPP CPCPPY  PP
Sbjct: 61  AIACAGKIADVVSIGPPPKPGEKKPDEKKEGDKKP----ADPKKPEPPP-CPCPPYHCPP 120

Query: 121 YYGSSYIVVPRETYPSCTIL 139
           YYGSSY++VPRETYP C+IL
Sbjct: 121 YYGSSYVIVPRETYPPCSIL 135

[Close]

BLAST of Clc01G19980 vs. NCBI nr
Match: KGN48859.1 (hypothetical protein Csa_003365 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 4.7e-51
Identity = 113/140 (80.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDE KGTLAV GTADPF+IVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPY--PP 120
           AIACAGKV DVV+IGPPPKP+EKKP++KK + KKP DKKPD      PP CPCPPY  PP
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPD------PPPCPCPPYPCPP 120

Query: 121 YYGSSYIVVPRETYPSCTIL 139
           YYGSSY++VP ETYPSC+IL
Sbjct: 121 YYGSSYVIVPHETYPSCSIL 134

[Close]

BLAST of Clc01G19980 vs. NCBI nr
Match: XP_004149991.2 (uncharacterized protein LOC101205995 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 4.7e-51
Identity = 113/140 (80.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDE KGTLAV GTADPF+IVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPY--PP 120
           AIACAGKV DVV+IGPPPKP+EKKP++KK + KKP DKKPD      PP CPCPPY  PP
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPD------PPPCPCPPYPCPP 120

Query: 121 YYGSSYIVVPRETYPSCTIL 139
           YYGSSY++VP ETYPSC+IL
Sbjct: 121 YYGSSYVIVPHETYPSCSIL 134

[Close]

BLAST of Clc01G19980 vs. NCBI nr
Match: XP_038877711.1 (heavy metal-associated isoprenylated plant protein 43-like [Benincasa hispida])

HSP 1 Score: 203.8 bits (517), Expect = 9.9e-49
Identity = 113/139 (81.29%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MAQTKTVLKLDIACQKCKTKVLKAVT+IEGVDKVETDE KGTL+VTGTADP DIVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTSIEGVDKVETDEAKGTLSVTGTADPVDIVKRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPV-CPCPPYPPY 120
           AI+CAGK+VDVV+IGPPPKPEE          KKPDDKKPDDKKP PPP  CPCPPYPPY
Sbjct: 61  AISCAGKIVDVVSIGPPPKPEE----------KKPDDKKPDDKKPAPPPCPCPCPPYPPY 120

Query: 121 YGSSYIVVPRETYPSCTIL 139
            G SY+VVP ET PSC+IL
Sbjct: 121 SG-SYVVVPCETNPSCSIL 128

[Close]

BLAST of Clc01G19980 vs. NCBI nr
Match: KAG7034127.1 (Heavy metal-associated isoprenylated plant protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 6.9e-42
Identity = 96/138 (69.57%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA TKT+LKLDIAC KCKTKVLKAVTA+EGVDK+E DE KGTLAVTGTADP+DIV RTRK
Sbjct: 1   MAMTKTILKLDIACHKCKTKVLKAVTALEGVDKIEMDEAKGTLAVTGTADPYDIVTRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPYPPYY 120
           AI+CAGK+ D+ TIGPPPKP        +P    P         P PPP CPCP YPPYY
Sbjct: 61  AISCAGKIADIDTIGPPPKPNPPPKPTPQPSCSCP---------PCPPPYCPCPSYPPYY 120

Query: 121 GSSYIVVPRETYPSCTIL 139
           GSSY+VVP ETYPSC+IL
Sbjct: 121 GSSYVVVPHETYPSCSIL 129

[Close]

BLAST of Clc01G19980 vs. ExPASy Swiss-Prot
Match: Q9SFF7 (Heavy metal-associated isoprenylated plant protein 43 OS=Arabidopsis thaliana OX=3702 GN=HIPP43 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-09
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           M   K  +K+DI C KC + +++AVT IEGV+ +  DE    L V GT DP  +  R +K
Sbjct: 1   MTVKKVEIKVDINCGKCNSAIMEAVTEIEGVNHISLDEGNSILTVVGTMDPVCVATRLKK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPP----Y 120
                 K V ++++GPPPKP    P+  KP         P+ +KP PPP  P PP     
Sbjct: 61  ---IKQKPV-IISVGPPPKP----PEPPKP---------PEPEKPKPPP-APEPPKHVCK 120

Query: 121 PPYYGSSYI--VVPRETYPSCTIL 139
           PPY  S  +  V   E+   CTIL
Sbjct: 121 PPYCNSCDVVSVTTYESGSGCTIL 126

[Close]

BLAST of Clc01G19980 vs. ExPASy Swiss-Prot
Match: Q8GWS3 (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 1  MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
          M   K  +K+DI C+KCK  +++AVT +EGV+ V  D+ K  L V GT DP  + ++ +K
Sbjct: 1  MTTKKIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKK 60

Query: 61 AIACAGKVVDVVTIGPPPKPEEKKPDDKK 90
                K   V+++GPP KP + KPD KK
Sbjct: 61 ----INKKPVVISVGPPKKP-DPKPDPKK 84

[Close]

BLAST of Clc01G19980 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.7e-07
Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLKLD+ C+K K K +  V  + GV+ VE  +  G L VTG  D + IVK+ +K      
Sbjct: 5   VLKLDVHCEKTKQKAMSTVCCLSGVNSVEVKD--GKLTVTGEIDAYMIVKKLKKICH--- 64

Query: 67  KVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPYPPYYGSSY 125
              + +++GP  +PE+KKPDD     KKP+ K PD      P   PCPPY   +   Y
Sbjct: 65  --TEFISVGPVKEPEKKKPDDP----KKPETKPPDVIYHYVP---PCPPYYHNFNGCY 108

[Close]

BLAST of Clc01G19980 vs. ExPASy Swiss-Prot
Match: Q9FJH5 (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=HIPP03 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLK+D+ C+ C ++++K V + +GV+ V+++   G L VTG  DP   VK   K      
Sbjct: 29  VLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTGALDP---VKLREKLEEKTK 88

Query: 67  KVVDVVTIGPPPKPEEKKPDDKKPD---NKKPDDKKPD--DKKPDPPPV 111
           K VD+V+  P PK E++K +  K D    K  + KKPD  DKKP   PV
Sbjct: 89  KKVDLVS--PQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKETPV 132

[Close]

BLAST of Clc01G19980 vs. ExPASy TrEMBL
Match: A0A1S3B1X1 (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103485075 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.9e-52
Identity = 116/140 (82.86%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDE KGTLAVTGTADPF+IVKRTRK
Sbjct: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVTGTADPFEIVKRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPY--PP 120
           AIACAGK+ DVV+IGPPPKP EKKPD+KK  +KKP     D KKP+PPP CPCPPY  PP
Sbjct: 61  AIACAGKIADVVSIGPPPKPGEKKPDEKKEGDKKP----ADPKKPEPPP-CPCPPYHCPP 120

Query: 121 YYGSSYIVVPRETYPSCTIL 139
           YYGSSY++VPRETYP C+IL
Sbjct: 121 YYGSSYVIVPRETYPPCSIL 135

[Close]

BLAST of Clc01G19980 vs. ExPASy TrEMBL
Match: A0A0A0KJ75 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504410 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 113/140 (80.71%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA TKTV+KLDIACQKCKTKVLKAVTAIEGVDKVETDE KGTLAV GTADPF+IVKRTRK
Sbjct: 1   MAVTKTVMKLDIACQKCKTKVLKAVTAIEGVDKVETDEAKGTLAVIGTADPFEIVKRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPY--PP 120
           AIACAGKV DVV+IGPPPKP+EKKP++KK + KKP DKKPD      PP CPCPPY  PP
Sbjct: 61  AIACAGKVADVVSIGPPPKPDEKKPEEKKQEEKKPVDKKPD------PPPCPCPPYPCPP 120

Query: 121 YYGSSYIVVPRETYPSCTIL 139
           YYGSSY++VP ETYPSC+IL
Sbjct: 121 YYGSSYVIVPHETYPSCSIL 134

[Close]

BLAST of Clc01G19980 vs. ExPASy TrEMBL
Match: A0A6J1GFG8 (heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata OX=3662 GN=LOC111453697 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.7e-42
Identity = 95/138 (68.84%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA TKT+LKLDI C KCKTKVLKAVTA+EGVDK+E DE KGTLAVTGTADP+DIV RTRK
Sbjct: 1   MAMTKTILKLDITCHKCKTKVLKAVTALEGVDKIEMDEAKGTLAVTGTADPYDIVTRTRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPYPPYY 120
           AI+CAGK+ D+ TIGPPPKP        +P    P         P PPP CPCP YPPYY
Sbjct: 61  AISCAGKIADIDTIGPPPKPNPPPKPTPQPSCSCP---------PFPPPYCPCPSYPPYY 120

Query: 121 GSSYIVVPRETYPSCTIL 139
           GSSY+VVP ETYPSC+IL
Sbjct: 121 GSSYVVVPHETYPSCSIL 129

[Close]

BLAST of Clc01G19980 vs. ExPASy TrEMBL
Match: A0A6J1HG22 (heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata OX=3662 GN=LOC111463168 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.3e-41
Identity = 97/138 (70.29%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA  KTVLKLDI+CQKCKTKVLKAVT++E VDKVETDE KGT+ V G ADP+ IVK TRK
Sbjct: 1   MAMIKTVLKLDISCQKCKTKVLKAVTSLEDVDKVETDEAKGTIGVIGKADPYKIVKITRK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPYPPYY 120
           A++ AGKVV+VV+IGPPPKP+EKKP++KKPD KKPD           P +C CPPYPP Y
Sbjct: 61  AVSSAGKVVEVVSIGPPPKPDEKKPEEKKPDGKKPD---------SVPCICTCPPYPP-Y 120

Query: 121 GSSYIVVPRETYPSCTIL 139
           GSSYIVVP ET PSC+IL
Sbjct: 121 GSSYIVVPHETQPSCSIL 128

[Close]

BLAST of Clc01G19980 vs. ExPASy TrEMBL
Match: A0A6J1IQI9 (heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita maxima OX=3661 GN=LOC111478514 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39
Identity = 96/142 (67.61%), Postives = 104/142 (73.24%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           MA TKT+LKLDIACQKCK KVLKAV AIEGVDK+ETDE KGTLAVTGTADP+DIV RTRK
Sbjct: 9   MAMTKTILKLDIACQKCKIKVLKAVAAIEGVDKIETDEAKGTLAVTGTADPYDIVTRTRK 68

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPY---- 120
           AI+CAGK+ D+ TIGPP KP           N  P        KP P P CPCPPY    
Sbjct: 69  AISCAGKIADIDTIGPPIKP-----------NPPP--------KPTPTPSCPCPPYPPPH 128

Query: 121 PPYYGSSYIVVPRETYPSCTIL 139
           PP YGSSY+VVP ETYPSC+IL
Sbjct: 129 PPCYGSSYVVVPHETYPSCSIL 131

[Close]

BLAST of Clc01G19980 vs. TAIR 10
Match: AT3G05920.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.3e-10
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 1   MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
           M   K  +K+DI C KC + +++AVT IEGV+ +  DE    L V GT DP  +  R +K
Sbjct: 1   MTVKKVEIKVDINCGKCNSAIMEAVTEIEGVNHISLDEGNSILTVVGTMDPVCVATRLKK 60

Query: 61  AIACAGKVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPP----Y 120
                 K V ++++GPPPKP    P+  KP         P+ +KP PPP  P PP     
Sbjct: 61  ---IKQKPV-IISVGPPPKP----PEPPKP---------PEPEKPKPPP-APEPPKHVCK 120

Query: 121 PPYYGSSYI--VVPRETYPSCTIL 139
           PPY  S  +  V   E+   CTIL
Sbjct: 121 PPYCNSCDVVSVTTYESGSGCTIL 126

[Close]

BLAST of Clc01G19980 vs. TAIR 10
Match: AT5G26690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 1  MAQTKTVLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRK 60
          M   K  +K+DI C+KCK  +++AVT +EGV+ V  D+ K  L V GT DP  + ++ +K
Sbjct: 1  MTTKKIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKK 60

Query: 61 AIACAGKVVDVVTIGPPPKPEEKKPDDKK 90
                K   V+++GPP KP + KPD KK
Sbjct: 61 ----INKKPVVISVGPPKKP-DPKPDPKK 84

[Close]

BLAST of Clc01G19980 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family )

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-08
Identity = 46/118 (38.98%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLKLD+ C+K K K +  V  + GV+ VE  +  G L VTG  D + IVK+ +K      
Sbjct: 5   VLKLDVHCEKTKQKAMSTVCCLSGVNSVEVKD--GKLTVTGEIDAYMIVKKLKKICH--- 64

Query: 67  KVVDVVTIGPPPKPEEKKPDDKKPDNKKPDDKKPDDKKPDPPPVCPCPPYPPYYGSSY 125
              + +++GP  +PE+KKPDD     KKP+ K PD      P   PCPPY   +   Y
Sbjct: 65  --TEFISVGPVKEPEKKKPDDP----KKPETKPPDVIYHYVP---PCPPYYHNFNGCY 108

[Close]

BLAST of Clc01G19980 vs. TAIR 10
Match: AT5G60800.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 8.4e-06
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLK+D+ C+ C ++++K V + +GV+ V+++   G L VTG  DP   VK   K      
Sbjct: 29  VLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTGALDP---VKLREKLEEKTK 88

Query: 67  KVVDVVTIGPPPKPEEKKPDDKKPD---NKKPDDKKPD--DKKPDPPPV 111
           K VD+V+  P PK E++K +  K D    K  + KKPD  DKKP   PV
Sbjct: 89  KKVDLVS--PQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKETPV 132

[Close]

BLAST of Clc01G19980 vs. TAIR 10
Match: AT5G60800.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 8.4e-06
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 7   VLKLDIACQKCKTKVLKAVTAIEGVDKVETDEVKGTLAVTGTADPFDIVKRTRKAIACAG 66
           VLK+D+ C+ C ++++K V + +GV+ V+++   G L VTG  DP   VK   K      
Sbjct: 29  VLKVDMHCEGCASRIVKCVRSFQGVETVKSESATGKLTVTGALDP---VKLREKLEEKTK 88

Query: 67  KVVDVVTIGPPPKPEEKKPDDKKPD---NKKPDDKKPD--DKKPDPPPV 111
           K VD+V+  P PK E++K +  K D    K  + KKPD  DKKP   PV
Sbjct: 89  KKVDLVS--PQPKKEKEKENKNKNDEDKKKSEEKKKPDNNDKKPKETPV 132

The following BLAST results are available for this feature:

BLAST of Clc01G19980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440757.1	1.6e-51	82.86	PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis me...	[more]
KGN48859.1	4.7e-51	80.71	hypothetical protein Csa_003365 [Cucumis sativus]	[more]
XP_004149991.2	4.7e-51	80.71	uncharacterized protein LOC101205995 [Cucumis sativus]	[more]
XP_038877711.1	9.9e-49	81.29	heavy metal-associated isoprenylated plant protein 43-like [Benincasa hispida]	[more]
KAG7034127.1	6.9e-42	69.57	Heavy metal-associated isoprenylated plant protein 43, partial [Cucurbita argyro...	[more]

BLAST of Clc01G19980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFF7	4.7e-09	38.19	Heavy metal-associated isoprenylated plant protein 43 OS=Arabidopsis thaliana OX...	[more]
Q8GWS3	1.8e-08	41.57	Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=...	[more]
Q9LTE3	9.7e-07	38.98	Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX...	[more]
Q9FJH5	1.2e-04	39.45	Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Clc01G19980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B1X1	7.9e-52	82.86	heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=365...	[more]
A0A0A0KJ75	2.3e-51	80.71	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504410 PE=4 SV...	[more]
A0A6J1GFG8	9.7e-42	68.84	heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata...	[more]
A0A6J1HG22	6.3e-41	70.29	heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita moschata...	[more]
A0A6J1IQI9	2.6e-39	67.61	heavy metal-associated isoprenylated plant protein 43-like OS=Cucurbita maxima O...	[more]

BLAST of Clc01G19980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05920.1	3.3e-10	38.19	Heavy metal transport/detoxification superfamily protein	[more]
AT5G26690.1	1.3e-09	41.57	Heavy metal transport/detoxification superfamily protein	[more]
AT5G52740.1	6.9e-08	38.98	Copper transport protein family	[more]
AT5G60800.1	8.4e-06	39.45	Heavy metal transport/detoxification superfamily protein	[more]
AT5G60800.2	8.4e-06	39.45	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..76 e-value: 7.1E-14 score: 53.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..112
None	No IPR available	PANTHER	PTHR45811:SF13	OS04G0661100 PROTEIN	coord: 4..137
None	No IPR available	PANTHER	PTHR45811	COPPER TRANSPORT PROTEIN FAMILY-RELATED	coord: 4..137
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 11..62 e-value: 2.4E-9 score: 37.5
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 3..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G19980.1	Clc01G19980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding