Clc01G18240 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G18240
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	transcription factor bHLH93
Location	ClcChr01: 30821363 .. 30822994 (-)
RNA-Seq Expression	Clc01G18240
Synteny	Clc01G18240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAACTTGGTGCAACTCCATGTTCATTAGTCTGTTTTCCACTTTCTTCAGACCAAAAGAAAGAAGAAGAAGACAATGGAGCTCAGTCAACATGGTTTTTTAGAAGAGTTATTAGCTTCAACGCCTTGGACCTCTTCATACTCAAATGGTTTCAATGATTTCTTCCAAAATGGATGCAATTTCAGCACTTTTGATGAGAATCCCCAAATGGGTACATCTAATTTCCCTAATTTTCCCGGTATCCAAACAGCTAATGATTTTTCTTTCGCCGATCAACAGCTCTACGGCAATTTTCTCGAAGGGTTTGCAATGCCGGAGCTTGATTCCTCATCGTACACTAAGAACAACGAAACCTCACCATTTATTTCTCAAGAAGAAATGAGTAATAAGAACAGTGGTTACCCTCCGGCGGCGATGGAGGAGGAAGAACTTGGTTTTATAGAGATTGAAACAGCTCCAAGTGTTTGCAAAGTGGAAATGGACCAAATGGGTTTGCGTGAAACTAATGGTTCTAAAATGGGTGTGGCAGAATTAGGGAAAAGAAGCAGCATCAAGGCTAAAAAGATTGAAGGACAGCCCTCAAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCAATGCTCAGAGCCATAGTCCCTAAAATAAGCAAGGTGAAGATGAATCCAAGACTTCCTAATTTTTTTTTGTATCTGTACTTTTAGTGGAAATTTCCGTTACTTTTTCTCATTTTTTTATGTAAAGCAGATGGATAGAACGTCTATACTTGGAGACACAATCGATTATGTGAAAGAGCTGATAGAAAGAATCAATAACTTGAAAGAAGAAGAGGAAATTGGTTTAGATTCAAATCACGTGGGCTTCTTCAATGGGATCTCCAAGGAAGGGAAGTCCAACGAAGTTCAAGTGAGGAATTCCCCAAAGGTATGTGCTTTCGCTGTTGTTACTGTTTAGTTTTAGTCTGCCATTGTTGAGCTAATGGCTGAAACTTTGTTGTTTGTTACACAGTTCGAAGTTGAAAGGACGGAGAGGGAGACTCGAATCGACATTTGCTGTGCAACGAGGCCAGGGTTATTGCTGTCTACAGTCAACACATTAGAAGCATTGGGGCTTGAGATTCAACAGTGTGTTATTAGCTGTTTCAATGATTTTTCAATGCAAGCTTCTTGTTCAGAGGTTTTGTTTTGTTGTGTTTTGTTTGTTTCTTTTGGTTTGTAATATTTCGATGTCTGTGTTTGTCTCTCTTTTTTTTCTCTCTTTTCTGAATGTTAAAAAATGTTGGTCTTTTTTGTCGGCAGGGAAGTGCTCAGAAAGCTGTGGCAAGTTCTGATGATATAAAGGAATCACTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAGGGGAAACACTTCAAAGTTTAAATCCGGAGCTCTCACCTTGGGGAACCTTGAAGTGAAGAACATTAATGGCATTCTTCATATGAATGAGTGAATCTGTCTCAATTAGAAATAATGGATCCGGAAGGCTCTTTCCAATAATTAATCTGGGTTTTATTTGCTGCATTTAGTGATTAGACTTAAATATACCGAAAATGACACTCCAATAATGTACTGAATGAGATGAACAAAAGAG

mRNA sequence

CCAACTTGGTGCAACTCCATGTTCATTAGTCTGTTTTCCACTTTCTTCAGACCAAAAGAAAGAAGAAGAAGACAATGGAGCTCAGTCAACATGGTTTTTTAGAAGAGTTATTAGCTTCAACGCCTTGGACCTCTTCATACTCAAATGGTTTCAATGATTTCTTCCAAAATGGATGCAATTTCAGCACTTTTGATGAGAATCCCCAAATGGGTACATCTAATTTCCCTAATTTTCCCGGTATCCAAACAGCTAATGATTTTTCTTTCGCCGATCAACAGCTCTACGGCAATTTTCTCGAAGGGTTTGCAATGCCGGAGCTTGATTCCTCATCGTACACTAAGAACAACGAAACCTCACCATTTATTTCTCAAGAAGAAATGAGTAATAAGAACAGTGGTTACCCTCCGGCGGCGATGGAGGAGGAAGAACTTGGTTTTATAGAGATTGAAACAGCTCCAAGTGTTTGCAAAGTGGAAATGGACCAAATGGGTTTGCGTGAAACTAATGGTTCTAAAATGGGTGTGGCAGAATTAGGGAAAAGAAGCAGCATCAAGGCTAAAAAGATTGAAGGACAGCCCTCAAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCAATGCTCAGAGCCATAGTCCCTAAAATAAGCAAGATGGATAGAACGTCTATACTTGGAGACACAATCGATTATGTGAAAGAGCTGATAGAAAGAATCAATAACTTGAAAGAAGAAGAGGAAATTGGTTTAGATTCAAATCACGTGGGCTTCTTCAATGGGATCTCCAAGGAAGGGAAGTCCAACGAAGTTCAAGTGAGGAATTCCCCAAAGTCTGCCATTGTTGAGCTAATGGCTGAAACTTTGTTGTTTGTTACACAGTTCGAAGTTGAAAGGACGGAGAGGGAGACTCGAATCGACATTTGCTGTGCAACGAGGCCAGGGTTATTGCTGTCTACAGTCAACACATTAGAAGCATTGGGGCTTGAGATTCAACAGTGTGTTATTAGCTGTTTCAATGATTTTTCAATGCAAGCTTCTTGTTCAGAGGGAAGTGCTCAGAAAGCTGTGGCAAGTTCTGATGATATAAAGGAATCACTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAGGGGAAACACTTCAAAGTTTAAATCCGGAGCTCTCACCTTGGGGAACCTTGAAGTGAAGAACATTAATGGCATTCTTCATATGAATGAGTGAATCTGTCTCAATTAGAAATAATGGATCCGGAAGGCTCTTTCCAATAATTAATCTGGGTTTTATTTGCTGCATTTAGTGATTAGACTTAAATATACCGAAAATGACACTCCAATAATGTACTGAATGAGATGAACAAAAGAG

Coding sequence (CDS)

ATGGAGCTCAGTCAACATGGTTTTTTAGAAGAGTTATTAGCTTCAACGCCTTGGACCTCTTCATACTCAAATGGTTTCAATGATTTCTTCCAAAATGGATGCAATTTCAGCACTTTTGATGAGAATCCCCAAATGGGTACATCTAATTTCCCTAATTTTCCCGGTATCCAAACAGCTAATGATTTTTCTTTCGCCGATCAACAGCTCTACGGCAATTTTCTCGAAGGGTTTGCAATGCCGGAGCTTGATTCCTCATCGTACACTAAGAACAACGAAACCTCACCATTTATTTCTCAAGAAGAAATGAGTAATAAGAACAGTGGTTACCCTCCGGCGGCGATGGAGGAGGAAGAACTTGGTTTTATAGAGATTGAAACAGCTCCAAGTGTTTGCAAAGTGGAAATGGACCAAATGGGTTTGCGTGAAACTAATGGTTCTAAAATGGGTGTGGCAGAATTAGGGAAAAGAAGCAGCATCAAGGCTAAAAAGATTGAAGGACAGCCCTCAAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCAATGCTCAGAGCCATAGTCCCTAAAATAAGCAAGATGGATAGAACGTCTATACTTGGAGACACAATCGATTATGTGAAAGAGCTGATAGAAAGAATCAATAACTTGAAAGAAGAAGAGGAAATTGGTTTAGATTCAAATCACGTGGGCTTCTTCAATGGGATCTCCAAGGAAGGGAAGTCCAACGAAGTTCAAGTGAGGAATTCCCCAAAGTCTGCCATTGTTGAGCTAATGGCTGAAACTTTGTTGTTTGTTACACAGTTCGAAGTTGAAAGGACGGAGAGGGAGACTCGAATCGACATTTGCTGTGCAACGAGGCCAGGGTTATTGCTGTCTACAGTCAACACATTAGAAGCATTGGGGCTTGAGATTCAACAGTGTGTTATTAGCTGTTTCAATGATTTTTCAATGCAAGCTTCTTGTTCAGAGGGAAGTGCTCAGAAAGCTGTGGCAAGTTCTGATGATATAAAGGAATCACTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAG

Protein sequence

MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTANDFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELGFIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNGISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL

Homology

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BLAST of Clc01G18240 vs. NCBI nr
Match: XP_038882570.1 (transcription factor bHLH93-like isoform X2 [Benincasa hispida])

HSP 1 Score: 607.1 bits (1564), Expect = 1.0e-169
Identity = 319/358 (89.11%), Postives = 330/358 (92.18%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NF++FDENPQMGTS FPNFP IQ AN
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFNSFDENPQMGTSIFPNFPSIQPAN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNS-GYPPAAMEEEEL 120
           DFSFADQQLYGNFLEGFAMPELDSSSYTKNNET PF+SQEE+SNKNS GYPPAAMEEEEL
Sbjct: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETPPFVSQEEISNKNSGGYPPAAMEEEEL 120

Query: 121 GFIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRR 180
           GFIE ETAPSVCKVEM+Q+G+RETN SKMGVAELGKR+S KAKKIEGQPSKNLMAERRRR
Sbjct: 121 GFIESETAPSVCKVEMEQLGVRETNVSKMGVAELGKRNSNKAKKIEGQPSKNLMAERRRR 180

Query: 181 KRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFN 240
           KRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFN
Sbjct: 181 KRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFN 240

Query: 241 GISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLST 300
           GISKE KSNEVQVRNSPK                F+VER ERETRIDICCATRPGLLLST
Sbjct: 241 GISKERKSNEVQVRNSPK----------------FDVERKERETRIDICCATRPGLLLST 300

Query: 301 VNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           VNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKA+ASSD IKE+LFRNAGYGGKCL
Sbjct: 301 VNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKALASSDVIKEALFRNAGYGGKCL 342

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BLAST of Clc01G18240 vs. NCBI nr
Match: XP_004143539.2 (transcription factor bHLH93 isoform X2 [Cucumis sativus] >KGN48675.1 hypothetical protein Csa_003823 [Cucumis sativus])

HSP 1 Score: 605.5 bits (1560), Expect = 2.9e-169
Identity = 314/357 (87.96%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NF++FDENPQM +S F NFP IQT N
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFTSFDENPQMASSTFSNFPTIQTPN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQQLY NFLEGFAMPELDSSSYTKNNET PF+SQEEMSNKN+GYPP AMEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           FIE ETAPSVCKVEM+QMG+RE NGS MGVAELGKRSS KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FIETETAPSVCKVEMEQMGVREINGSIMGVAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLKEEEE GLDSNHVGFFNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEEETGLDSNHVGFFNG 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           ISKEGKSNEVQVRNSPK                F+VER E+ETRIDICCATRPGLLLSTV
Sbjct: 241 ISKEGKSNEVQVRNSPK----------------FDVERKEKETRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQASC+EGSAQKAVASSDDIKE+LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQASCAEGSAQKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Clc01G18240 vs. NCBI nr
Match: XP_038882569.1 (transcription factor bHLH93-like isoform X1 [Benincasa hispida])

HSP 1 Score: 602.4 bits (1552), Expect = 2.5e-168
Identity = 319/359 (88.86%), Postives = 330/359 (91.92%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NF++FDENPQMGTS FPNFP IQ AN
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFNSFDENPQMGTSIFPNFPSIQPAN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNS-GYPPAAMEEEEL 120
           DFSFADQQLYGNFLEGFAMPELDSSSYTKNNET PF+SQEE+SNKNS GYPPAAMEEEEL
Sbjct: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETPPFVSQEEISNKNSGGYPPAAMEEEEL 120

Query: 121 GFIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRR 180
           GFIE ETAPSVCKVEM+Q+G+RETN SKMGVAELGKR+S KAKKIEGQPSKNLMAERRRR
Sbjct: 121 GFIESETAPSVCKVEMEQLGVRETNVSKMGVAELGKRNSNKAKKIEGQPSKNLMAERRRR 180

Query: 181 KRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFN 240
           KRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFN
Sbjct: 181 KRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFN 240

Query: 241 GISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLST 300
           GISKE KSNEVQVRNSPK                F+VER ERETRIDICCATRPGLLLST
Sbjct: 241 GISKERKSNEVQVRNSPK----------------FDVERKERETRIDICCATRPGLLLST 300

Query: 301 VNTLEALGLEIQQCVISCFNDFSMQASCSE-GSAQKAVASSDDIKESLFRNAGYGGKCL 358
           VNTLEALGLEIQQCVISCFNDFSMQASCSE GSAQKA+ASSD IKE+LFRNAGYGGKCL
Sbjct: 301 VNTLEALGLEIQQCVISCFNDFSMQASCSEQGSAQKALASSDVIKEALFRNAGYGGKCL 343

[Close]

BLAST of Clc01G18240 vs. NCBI nr
Match: XP_011657932.1 (transcription factor bHLH93 isoform X1 [Cucumis sativus])

HSP 1 Score: 600.9 bits (1548), Expect = 7.2e-168
Identity = 314/358 (87.71%), Postives = 326/358 (91.06%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NF++FDENPQM +S F NFP IQT N
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFTSFDENPQMASSTFSNFPTIQTPN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQQLY NFLEGFAMPELDSSSYTKNNET PF+SQEEMSNKN+GYPP AMEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           FIE ETAPSVCKVEM+QMG+RE NGS MGVAELGKRSS KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FIETETAPSVCKVEMEQMGVREINGSIMGVAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLKEEEE GLDSNHVGFFNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEEETGLDSNHVGFFNG 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           ISKEGKSNEVQVRNSPK                F+VER E+ETRIDICCATRPGLLLSTV
Sbjct: 241 ISKEGKSNEVQVRNSPK----------------FDVERKEKETRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSE-GSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQASC+E GSAQKAVASSDDIKE+LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQASCAEQGSAQKAVASSDDIKEALFRNAGYGGKCL 342

[Close]

BLAST of Clc01G18240 vs. NCBI nr
Match: XP_008440501.1 (PREDICTED: transcription factor bHLH93 isoform X2 [Cucumis melo])

HSP 1 Score: 600.5 bits (1547), Expect = 9.4e-168
Identity = 312/357 (87.39%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NFS+FDENPQMG+S FPNFP IQTAN
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFSSFDENPQMGSSTFPNFPTIQTAN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQQLY NFLEGFAMPELDSSSYTKNNET PF+SQEEMSNKN+GYPP AMEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           F+E ETAPSVCKVEM+QMG+RE NGS MG+AELGKRSS KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMESETAPSVCKVEMEQMGVREINGSIMGIAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLK EEE GLDSNHVG FNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLK-EEETGLDSNHVGLFNG 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           IS EGKSNEVQVRNSPK                F+VER E+ETRIDICCATRPGLLLSTV
Sbjct: 241 ISNEGKSNEVQVRNSPK----------------FDVERKEKETRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQASC+EGSAQKAVASSDDIK++LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQASCAEGSAQKAVASSDDIKDALFRNAGYGGKCL 340

[Close]

BLAST of Clc01G18240 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-62
Identity = 170/379 (44.85%), Postives = 226/379 (59.63%), Query Frame = 0


Query: 1   MELS-QHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTA 60
           MELS Q    EELL  T   ++ +N  N  F  G     FD +      N  N   +   
Sbjct: 1   MELSTQMNVFEELLVPTKQETTDNNINNLSFNGG-----FDHHHHQFFPNGYNIDYLCFN 60

Query: 61  NDFSFADQQLY-GNFLEGFAM----------------PELDSSSYTKNNETSPFI-SQEE 120
           N+    +  LY  +F++  +                 P L SS+        PF+ + +E
Sbjct: 61  NEEEDENTLLYPSSFMDLISQPPPLLLHQPPPLQPLSPPLSSSATAGATFDYPFLEALQE 120

Query: 121 MSNKNSGYPPAAMEE-EELGFIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIK 180
           + + +S  PP  ++  +E  F    + PS   +E DQ     +    +G    G+ +  K
Sbjct: 121 IIDSSSSSPPLILQNGQEENFNNPMSYPSPL-MESDQ-----SKSFSVGYCG-GETNKKK 180

Query: 181 AKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERIN 240
           +KK+EGQPSKNLMAERRRRKRLNDRLSMLR+IVPKISKMDRTSILGD IDY+KEL+++IN
Sbjct: 181 SKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKIN 240

Query: 241 NLK-EEEEIGLDSN-HVGFFNGISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVER 300
            L+ EE+E+G  +N H     G  K+  +NE  VRNSPK                FE++R
Sbjct: 241 KLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK----------------FEIDR 300

Query: 301 TERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVAS 358
            + +TR+DICC+ +PGLLLSTVNTLE LGLEI+QCVISCF+DFS+QASCSEG+ Q+   +
Sbjct: 301 RDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFIT 351

[Close]

BLAST of Clc01G18240 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.5e-54
Identity = 120/198 (60.61%), Postives = 144/198 (72.73%), Query Frame = 0


Query: 163 KIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNL 222
           K+ G PSKNLMAERRRRKRLNDRLSMLR+IVPKISKMDRTSILGDTIDYVKEL ERI  L
Sbjct: 175 KLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTL 234

Query: 223 KEEEEIGLDSNHVGFFNGI--SKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVE-RT 282
             EEEIG+    +   N +  S  G +NE+ VRNS                T+F+VE R 
Sbjct: 235 --EEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNS----------------TKFDVENRG 294

Query: 283 ERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASS 342
              TRI+ICC   PG+LLSTV+ LE LGLEI+QCV+SCF+DF MQASC +   ++ V S+
Sbjct: 295 SGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVST 354

Query: 343 DDIKESLFRNAGYGGKCL 358
           D+IK++LFR+AGYGG+CL
Sbjct: 355 DEIKQTLFRSAGYGGRCL 354

[Close]

BLAST of Clc01G18240 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.2e-54
Identity = 120/218 (55.05%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 140 LRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKM 199
           L E + S + + E  K+ S   KK+EGQPSKNLMAERRRRKRLNDRLS+LR+IVPKI+KM
Sbjct: 123 LMEESKSFISIGETNKKRS--NKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKM 182

Query: 200 DRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNGISKEGKSNEVQVRNSPKSA 259
           DRTSILGD IDY+KEL+++IN L+E+E+    ++H+           +NE  VRNS K  
Sbjct: 183 DRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTL-------ITNESMVRNSLK-- 242

Query: 260 IVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFN 319
                         FEV++ E  T IDICC T+PGL++STV+TLE LGLEI+QCVISCF+
Sbjct: 243 --------------FEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFS 302

Query: 320 DFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           DFS+QASC E   Q+ + +S+  K++L RNAGYGG+CL
Sbjct: 303 DFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Clc01G18240 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-42
Identity = 106/195 (54.36%), Postives = 135/195 (69.23%), Query Frame = 0


Query: 166 GQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEE 225
           G PSKNLMAERRRRKRLNDRLSMLR++VP+ISKMDRTSILGDTI YVKEL++RI NL+ E
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251

Query: 226 EEIGLDSNHVGFFNGISKEGKSN-EVQVRNSPKSAIVELMAETLLFVTQFEVERTER-ET 285
              G  S+        S E  S  ++     P S+        +   T+FEVER E   T
Sbjct: 252 AATGDSSSS-------STENLSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERRENGST 311

Query: 286 RIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVA-SSDDI 345
           RI++ CA  P LL ST+  LEALG+EI+QCVISCF+DF+MQASC +   ++ +   +++I
Sbjct: 312 RIEMACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEI 371

Query: 346 KESLFRNAGYGGKCL 358
           K++LFR+AGYG  CL
Sbjct: 372 KQTLFRSAGYGDGCL 379

[Close]

BLAST of Clc01G18240 vs. ExPASy Swiss-Prot
Match: Q9LPW3 (Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-30
Identity = 89/196 (45.41%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 160 KAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERI 219
           K KK +G P+KNLMAERRRRK+LNDRL MLR++VPKISKMDR SILGD IDY+KEL++RI
Sbjct: 258 KGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 317

Query: 220 NNLKEEEEIGLDSNHVGFFNGISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVE-R 279
           N+L  E E    S+        + +  S  V+    P S++     +      + EV  R
Sbjct: 318 NDLHTELESTPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQ----PRVEVRLR 377

Query: 280 TERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVAS 339
             +   I + C  RPGLLLST+  L+ LGL++QQ VISCFN F++    +E   +     
Sbjct: 378 EGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVL 437

Query: 340 SDDIKESLFRNAGYGG 355
            + IK  L   AGY G
Sbjct: 438 PEQIKAVLLDTAGYAG 448

[Close]

BLAST of Clc01G18240 vs. ExPASy TrEMBL
Match: A0A0A0KG39 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497260 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.4e-169
Identity = 314/357 (87.96%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NF++FDENPQM +S F NFP IQT N
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFTSFDENPQMASSTFSNFPTIQTPN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQQLY NFLEGFAMPELDSSSYTKNNET PF+SQEEMSNKN+GYPP AMEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           FIE ETAPSVCKVEM+QMG+RE NGS MGVAELGKRSS KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FIETETAPSVCKVEMEQMGVREINGSIMGVAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLKEEEE GLDSNHVGFFNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEEETGLDSNHVGFFNG 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           ISKEGKSNEVQVRNSPK                F+VER E+ETRIDICCATRPGLLLSTV
Sbjct: 241 ISKEGKSNEVQVRNSPK----------------FDVERKEKETRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQASC+EGSAQKAVASSDDIKE+LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQASCAEGSAQKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Clc01G18240 vs. ExPASy TrEMBL
Match: A0A1S3B0U8 (transcription factor bHLH93 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484909 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.5e-168
Identity = 312/357 (87.39%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NFS+FDENPQMG+S FPNFP IQTAN
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFSSFDENPQMGSSTFPNFPTIQTAN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQQLY NFLEGFAMPELDSSSYTKNNET PF+SQEEMSNKN+GYPP AMEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           F+E ETAPSVCKVEM+QMG+RE NGS MG+AELGKRSS KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMESETAPSVCKVEMEQMGVREINGSIMGIAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLK EEE GLDSNHVG FNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLK-EEETGLDSNHVGLFNG 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           IS EGKSNEVQVRNSPK                F+VER E+ETRIDICCATRPGLLLSTV
Sbjct: 241 ISNEGKSNEVQVRNSPK----------------FDVERKEKETRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQASC+EGSAQKAVASSDDIK++LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQASCAEGSAQKAVASSDDIKDALFRNAGYGGKCL 340

[Close]

BLAST of Clc01G18240 vs. ExPASy TrEMBL
Match: A0A1S3B204 (transcription factor bHLH93 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484909 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 1.1e-166
Identity = 312/358 (87.15%), Postives = 326/358 (91.06%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPWTSSYSNGFNDFFQNG NFS+FDENPQMG+S FPNFP IQTAN
Sbjct: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGWNFSSFDENPQMGSSTFPNFPTIQTAN 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQQLY NFLEGFAMPELDSSSYTKNNET PF+SQEEMSNKN+GYPP AMEEEELG
Sbjct: 61  DFSFADQQLYSNFLEGFAMPELDSSSYTKNNETPPFVSQEEMSNKNNGYPPVAMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           F+E ETAPSVCKVEM+QMG+RE NGS MG+AELGKRSS KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMESETAPSVCKVEMEQMGVREINGSIMGIAELGKRSSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLK EEE GLDSNHVG FNG
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLK-EEETGLDSNHVGLFNG 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           IS EGKSNEVQVRNSPK                F+VER E+ETRIDICCATRPGLLLSTV
Sbjct: 241 ISNEGKSNEVQVRNSPK----------------FDVERKEKETRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSE-GSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQASC+E GSAQKAVASSDDIK++LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQASCAEQGSAQKAVASSDDIKDALFRNAGYGGKCL 341

[Close]

BLAST of Clc01G18240 vs. ExPASy TrEMBL
Match: A0A6J1GDE8 (transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452970 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 295/357 (82.63%), Postives = 313/357 (87.68%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPW+SSYSNGFNDFFQN  NF  FDENPQMGTS  P+FP +QTA 
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQ LY NF+EGFAMPELDSSSYT+NNET PF+SQEEMSNKNSG+PP  MEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           F+E E APSVCKVEM+QMG RETN SKMGVAE  KR+S KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLKEE+E GLDSNHVG FN 
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVG-FNA 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           ISKEGK NEVQVRNSPK                F++E+ E +TRIDICCATRPGLLLSTV
Sbjct: 241 ISKEGKPNEVQVRNSPK----------------FDIEKRESKTRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQA CSEGS +KAVASSDDIKE+LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQACCSEGSGEKAVASSDDIKEALFRNAGYGGKCL 340

[Close]

BLAST of Clc01G18240 vs. ExPASy TrEMBL
Match: A0A6J1GCM1 (transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452970 PE=4 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 5.2e-156
Identity = 295/358 (82.40%), Postives = 313/358 (87.43%), Query Frame = 0


Query: 1   MELSQHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTAN 60
           MELSQHGFLEELLASTPW+SSYSNGFNDFFQN  NF  FDENPQMGTS  P+FP +QTA 
Sbjct: 1   MELSQHGFLEELLASTPWSSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPALQTAT 60

Query: 61  DFSFADQQLYGNFLEGFAMPELDSSSYTKNNETSPFISQEEMSNKNSGYPPAAMEEEELG 120
           DFSFADQ LY NF+EGFAMPELDSSSYT+NNET PF+SQEEMSNKNSG+PP  MEEEELG
Sbjct: 61  DFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGMEEEELG 120

Query: 121 FIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRK 180
           F+E E APSVCKVEM+QMG RETN SKMGVAE  KR+S KAKKIEGQPSKNLMAERRRRK
Sbjct: 121 FMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAERRRRK 180

Query: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNG 240
           RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKEL+ERINNLKEE+E GLDSNHVG FN 
Sbjct: 181 RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHVG-FNA 240

Query: 241 ISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTV 300
           ISKEGK NEVQVRNSPK                F++E+ E +TRIDICCATRPGLLLSTV
Sbjct: 241 ISKEGKPNEVQVRNSPK----------------FDIEKRESKTRIDICCATRPGLLLSTV 300

Query: 301 NTLEALGLEIQQCVISCFNDFSMQASCSE-GSAQKAVASSDDIKESLFRNAGYGGKCL 358
           NTLEALGLEIQQCVISCFNDFSMQA CSE GS +KAVASSDDIKE+LFRNAGYGGKCL
Sbjct: 301 NTLEALGLEIQQCVISCFNDFSMQACCSEQGSGEKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Clc01G18240 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-63
Identity = 170/379 (44.85%), Postives = 226/379 (59.63%), Query Frame = 0


Query: 1   MELS-QHGFLEELLASTPWTSSYSNGFNDFFQNGCNFSTFDENPQMGTSNFPNFPGIQTA 60
           MELS Q    EELL  T   ++ +N  N  F  G     FD +      N  N   +   
Sbjct: 1   MELSTQMNVFEELLVPTKQETTDNNINNLSFNGG-----FDHHHHQFFPNGYNIDYLCFN 60

Query: 61  NDFSFADQQLY-GNFLEGFAM----------------PELDSSSYTKNNETSPFI-SQEE 120
           N+    +  LY  +F++  +                 P L SS+        PF+ + +E
Sbjct: 61  NEEEDENTLLYPSSFMDLISQPPPLLLHQPPPLQPLSPPLSSSATAGATFDYPFLEALQE 120

Query: 121 MSNKNSGYPPAAMEE-EELGFIEIETAPSVCKVEMDQMGLRETNGSKMGVAELGKRSSIK 180
           + + +S  PP  ++  +E  F    + PS   +E DQ     +    +G    G+ +  K
Sbjct: 121 IIDSSSSSPPLILQNGQEENFNNPMSYPSPL-MESDQ-----SKSFSVGYCG-GETNKKK 180

Query: 181 AKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERIN 240
           +KK+EGQPSKNLMAERRRRKRLNDRLSMLR+IVPKISKMDRTSILGD IDY+KEL+++IN
Sbjct: 181 SKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKIN 240

Query: 241 NLK-EEEEIGLDSN-HVGFFNGISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVER 300
            L+ EE+E+G  +N H     G  K+  +NE  VRNSPK                FE++R
Sbjct: 241 KLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK----------------FEIDR 300

Query: 301 TERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVAS 358
            + +TR+DICC+ +PGLLLSTVNTLE LGLEI+QCVISCF+DFS+QASCSEG+ Q+   +
Sbjct: 301 RDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFIT 351

[Close]

BLAST of Clc01G18240 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 3.0e-55
Identity = 120/218 (55.05%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 140 LRETNGSKMGVAELGKRSSIKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKM 199
           L E + S + + E  K+ S   KK+EGQPSKNLMAERRRRKRLNDRLS+LR+IVPKI+KM
Sbjct: 123 LMEESKSFISIGETNKKRS--NKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKM 182

Query: 200 DRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNGISKEGKSNEVQVRNSPKSA 259
           DRTSILGD IDY+KEL+++IN L+E+E+    ++H+           +NE  VRNS K  
Sbjct: 183 DRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTL-------ITNESMVRNSLK-- 242

Query: 260 IVELMAETLLFVTQFEVERTERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFN 319
                         FEV++ E  T IDICC T+PGL++STV+TLE LGLEI+QCVISCF+
Sbjct: 243 --------------FEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFS 302

Query: 320 DFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGGKCL 358
           DFS+QASC E   Q+ + +S+  K++L RNAGYGG+CL
Sbjct: 303 DFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Clc01G18240 vs. TAIR 10
Match: AT1G12860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-31
Identity = 89/196 (45.41%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 160 KAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELIERI 219
           K KK +G P+KNLMAERRRRK+LNDRL MLR++VPKISKMDR SILGD IDY+KEL++RI
Sbjct: 258 KGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 317

Query: 220 NNLKEEEEIGLDSNHVGFFNGISKEGKSNEVQVRNSPKSAIVELMAETLLFVTQFEVE-R 279
           N+L  E E    S+        + +  S  V+    P S++     +      + EV  R
Sbjct: 318 NDLHTELESTPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQ----PRVEVRLR 377

Query: 280 TERETRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVAS 339
             +   I + C  RPGLLLST+  L+ LGL++QQ VISCFN F++    +E   +     
Sbjct: 378 EGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVL 437

Query: 340 SDDIKESLFRNAGYGG 355
            + IK  L   AGY G
Sbjct: 438 PEQIKAVLLDTAGYAG 448

[Close]

BLAST of Clc01G18240 vs. TAIR 10
Match: AT3G26744.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-31
Identity = 100/235 (42.55%), Postives = 128/235 (54.47%), Query Frame = 0


Query: 134 EMDQMGLRET--NGSKMGVAELGKRSSI-------KAKKIEGQPSKNLMAERRRRKRLND 193
           +MD+ G+  +  N     + E GK +         K KK +G P+KNLMAERRRRK+LND
Sbjct: 263 DMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKK-KGMPAKNLMAERRRRKKLND 322

Query: 194 RLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNGISKE 253
           RL MLR++VPKISKMDR SILGD IDY+KEL++RIN+L  E    L+S   G     S  
Sbjct: 323 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE----LESTPPGSLPPTSSS 382

Query: 254 GKSNEVQVRNSPKSAIVELMAETLLFV--TQFEVE---RTERETRIDICCATRPGLLLST 313
                   +        EL   +L      Q  VE   R  R   I + C  RPGLLL+T
Sbjct: 383 FHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLAT 442

Query: 314 VNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGG 355
           +  L+ LGL++QQ VISCFN F++    +E   +      D IK  LF  AGY G
Sbjct: 443 MKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492

[Close]

BLAST of Clc01G18240 vs. TAIR 10
Match: AT3G26744.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-31
Identity = 100/235 (42.55%), Postives = 128/235 (54.47%), Query Frame = 0


Query: 134 EMDQMGLRET--NGSKMGVAELGKRSSI-------KAKKIEGQPSKNLMAERRRRKRLND 193
           +MD+ G+  +  N     + E GK +         K KK +G P+KNLMAERRRRK+LND
Sbjct: 263 DMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKK-KGMPAKNLMAERRRRKKLND 322

Query: 194 RLSMLRAIVPKISKMDRTSILGDTIDYVKELIERINNLKEEEEIGLDSNHVGFFNGISKE 253
           RL MLR++VPKISKMDR SILGD IDY+KEL++RIN+L  E    L+S   G     S  
Sbjct: 323 RLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE----LESTPPGSLPPTSSS 382

Query: 254 GKSNEVQVRNSPKSAIVELMAETLLFV--TQFEVE---RTERETRIDICCATRPGLLLST 313
                   +        EL   +L      Q  VE   R  R   I + C  RPGLLL+T
Sbjct: 383 FHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLAT 442

Query: 314 VNTLEALGLEIQQCVISCFNDFSMQASCSEGSAQKAVASSDDIKESLFRNAGYGG 355
           +  L+ LGL++QQ VISCFN F++    +E   +      D IK  LF  AGY G
Sbjct: 443 MKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492

The following BLAST results are available for this feature:

BLAST of Clc01G18240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882570.1	1.0e-169	89.11	transcription factor bHLH93-like isoform X2 [Benincasa hispida]	[more]
XP_004143539.2	2.9e-169	87.96	transcription factor bHLH93 isoform X2 [Cucumis sativus] >KGN48675.1 hypothetica...	[more]
XP_038882569.1	2.5e-168	88.86	transcription factor bHLH93-like isoform X1 [Benincasa hispida]	[more]
XP_011657932.1	7.2e-168	87.71	transcription factor bHLH93 isoform X1 [Cucumis sativus]	[more]
XP_008440501.1	9.4e-168	87.39	PREDICTED: transcription factor bHLH93 isoform X2 [Cucumis melo]	[more]

BLAST of Clc01G18240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL1	1.9e-62	44.85	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]
Q10S44	2.5e-54	60.61	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q9LXA9	4.2e-54	55.05	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q336V8	1.3e-42	54.36	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q9LPW3	4.3e-30	45.41	Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1	[more]

BLAST of Clc01G18240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG39	1.4e-169	87.96	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497260 PE=4 S...	[more]
A0A1S3B0U8	4.5e-168	87.39	transcription factor bHLH93 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484909 P...	[more]
A0A1S3B204	1.1e-166	87.15	transcription factor bHLH93 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484909 P...	[more]
A0A6J1GDE8	2.1e-157	82.63	transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GCM1	5.2e-156	82.40	transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Clc01G18240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65640.1	1.3e-63	44.85	beta HLH protein 93	[more]
AT5G10570.1	3.0e-55	55.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12860.1	3.0e-31	45.41	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.1	4.0e-31	42.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.2	4.0e-31	42.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 172..221 e-value: 6.9E-11 score: 52.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 172..215 e-value: 2.2E-9 score: 37.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 166..215 score: 15.192548
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 158..229 e-value: 2.4E-13 score: 51.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 169..228
None	No IPR available	PANTHER	PTHR31945:SF72	DNA BINDING PROTEIN	coord: 5..357
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 5..357
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 283..324 e-value: 0.00274604 score: 34.0609

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G18240.2	Clc01G18240.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding