Clc01G15620 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G15620
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor ABR1
Location	ClcChr01: 28395194 .. 28396825 (+)
RNA-Seq Expression	Clc01G15620
Synteny	Clc01G15620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACACCTTTGAAAAATGAACTCACAAATATCCTTTATAATGATTTTATATATAATCTTCCTCTCCAAAAAAAGGAAAGAAAAGAAAAAAAAAACCACAATTCGAATTTCCATAAAAAGAATTTAAGGTTGAAGCTTTTGATTAAAATTATTGCATGGCGGATCCAGAGGACACCAAAGCTCCAGAGATGTTGTTTTTAGGTTTCAGTAGAGAGATGGAGATGTCGGCTATGGTTTCCGCTCTGACCCACGTCGTCGCCGGAGATGTGCCGGACAGTGATTCTTATTGTGATTCCACCTGGAGCTTCTCCTCTGTTTCTGCTTCCGCTGCACCTTCCGCCCCTCACGGCGGCGGTCGATATAAGAGAGGCCGAACACTGGCCATGGAAGACGGTGGCTCTGTTTCAACTTGGTCGCCATCCTCTGTAATTTCAGGTGAACTTTCTTATGGTTGCTAAGCTTATATAAAATTCTAATCAATTTGTTTGTAAAAAAAATGAATTCGATCGAAAAATATTGTTGATAGAAAGGAAAAGAAGATTGCAATTATTGTAGCTGTTCTTCTTTCTAATTTGTAAAAAATAATGAAATCTGACCTGTTTAATTAGTAATTATAATTTGAATTCTACAAAATAGAATAGATAGATATGGGAAGTTTTAAATTGGGAATAATTTTATGATCCTGAAAATAATGCAATTTGACAAAAATCCAACCATTTGAATCCTTTTAATTTCAAGAATGAAGAACAGAGGGCTTTAAATTTCTTCAAGTCTGTAGGAAAAAAACAGAGGATTGTTCGCTGTTAATTAATAAATTGGCATTTTTTTGCAGGAGATTCGAGCAATCTAGTGATCATAAGGCCACAAACAGGGTCGGTGGCGATGGAAAATTCCGTCTACGAATACGGCGGAGAGATTCCAACCACGGCCGAGGAACCACCGGCGAGAAGAAAATACAGGGGCGTAAGACAGAGGCCATGGGGGAAATGGGCAGCCGAGATACGAGACCCGTACAAGGCGGCGAGAGTTTGGTTAGGTACTTTTGACACGGCGGAATCCGCCGCACGGGCTTACGACGAAGCCGCCCTCCGATTCCGAGGCAATAAAGCCAAGCTTAACTTCCCGGAAAATGTCCGTCTCCGGCAGCTTCCGACCACCGAATCTTCGGCTACCCATTTTAGCAGTTCGAATTCTACGAACACCCTTTTGGCAATTCCGACCAATTCCGAATCGATTGTCCATTCTCGGCCAACTGCTAACCTGCAGAGCTCCTCCGATACTTCGCCGGCCAAATTTCTCAATTTCTCCGACGGTCAATTGCAGACGCCGATCGACATGTACAGTGAAATTAACTTCTCATCTTCAACATCAATGCCTTCCCCTTTTTATTCTTCTTCCTACGGATCGACGAATTCTCAATTTTCGTCGTCGTCTTCTTCTTCGCCGGTTGTTTCTCTTTCTTTCCCACCTCAGTCCTCTTCCGGCCGTCGGAACAACGCCGGCGACAATGAACATTATCCGATTTCAGATTGGTCTGAATTTTTCAATCATGCTGCCTCGTCGGGATGAATACGTTGTTTGTTTTGGATTTCCGGTCGAGTTAGGTAATTGAATTAGTAGAGTTGAGGTTGAG

mRNA sequence

AAACACCTTTGAAAAATGAACTCACAAATATCCTTTATAATGATTTTATATATAATCTTCCTCTCCAAAAAAAGGAAAGAAAAGAAAAAAAAAACCACAATTCGAATTTCCATAAAAAGAATTTAAGGTTGAAGCTTTTGATTAAAATTATTGCATGGCGGATCCAGAGGACACCAAAGCTCCAGAGATGTTGTTTTTAGGTTTCAGTAGAGAGATGGAGATGTCGGCTATGGTTTCCGCTCTGACCCACGTCGTCGCCGGAGATGTGCCGGACAGTGATTCTTATTGTGATTCCACCTGGAGCTTCTCCTCTGTTTCTGCTTCCGCTGCACCTTCCGCCCCTCACGGCGGCGGTCGATATAAGAGAGGCCGAACACTGGCCATGGAAGACGGTGGCTCTGTTTCAACTTGGTCGCCATCCTCTGTAATTTCAGGAGATTCGAGCAATCTAGTGATCATAAGGCCACAAACAGGGTCGGTGGCGATGGAAAATTCCGTCTACGAATACGGCGGAGAGATTCCAACCACGGCCGAGGAACCACCGGCGAGAAGAAAATACAGGGGCGTAAGACAGAGGCCATGGGGGAAATGGGCAGCCGAGATACGAGACCCGTACAAGGCGGCGAGAGTTTGGTTAGGTACTTTTGACACGGCGGAATCCGCCGCACGGGCTTACGACGAAGCCGCCCTCCGATTCCGAGGCAATAAAGCCAAGCTTAACTTCCCGGAAAATGTCCGTCTCCGGCAGCTTCCGACCACCGAATCTTCGGCTACCCATTTTAGCAGTTCGAATTCTACGAACACCCTTTTGGCAATTCCGACCAATTCCGAATCGATTGTCCATTCTCGGCCAACTGCTAACCTGCAGAGCTCCTCCGATACTTCGCCGGCCAAATTTCTCAATTTCTCCGACGGTCAATTGCAGACGCCGATCGACATGTACAGTGAAATTAACTTCTCATCTTCAACATCAATGCCTTCCCCTTTTTATTCTTCTTCCTACGGATCGACGAATTCTCAATTTTCGTCGTCGTCTTCTTCTTCGCCGGTTGTTTCTCTTTCTTTCCCACCTCAGTCCTCTTCCGGCCGTCGGAACAACGCCGGCGACAATGAACATTATCCGATTTCAGATTGGTCTGAATTTTTCAATCATGCTGCCTCGTCGGGATGAATACGTTGTTTGTTTTGGATTTCCGGTCGAGTTAGGTAATTGAATTAGTAGAGTTGAGGTTGAG

Coding sequence (CDS)

ATGGCGGATCCAGAGGACACCAAAGCTCCAGAGATGTTGTTTTTAGGTTTCAGTAGAGAGATGGAGATGTCGGCTATGGTTTCCGCTCTGACCCACGTCGTCGCCGGAGATGTGCCGGACAGTGATTCTTATTGTGATTCCACCTGGAGCTTCTCCTCTGTTTCTGCTTCCGCTGCACCTTCCGCCCCTCACGGCGGCGGTCGATATAAGAGAGGCCGAACACTGGCCATGGAAGACGGTGGCTCTGTTTCAACTTGGTCGCCATCCTCTGTAATTTCAGGAGATTCGAGCAATCTAGTGATCATAAGGCCACAAACAGGGTCGGTGGCGATGGAAAATTCCGTCTACGAATACGGCGGAGAGATTCCAACCACGGCCGAGGAACCACCGGCGAGAAGAAAATACAGGGGCGTAAGACAGAGGCCATGGGGGAAATGGGCAGCCGAGATACGAGACCCGTACAAGGCGGCGAGAGTTTGGTTAGGTACTTTTGACACGGCGGAATCCGCCGCACGGGCTTACGACGAAGCCGCCCTCCGATTCCGAGGCAATAAAGCCAAGCTTAACTTCCCGGAAAATGTCCGTCTCCGGCAGCTTCCGACCACCGAATCTTCGGCTACCCATTTTAGCAGTTCGAATTCTACGAACACCCTTTTGGCAATTCCGACCAATTCCGAATCGATTGTCCATTCTCGGCCAACTGCTAACCTGCAGAGCTCCTCCGATACTTCGCCGGCCAAATTTCTCAATTTCTCCGACGGTCAATTGCAGACGCCGATCGACATGTACAGTGAAATTAACTTCTCATCTTCAACATCAATGCCTTCCCCTTTTTATTCTTCTTCCTACGGATCGACGAATTCTCAATTTTCGTCGTCGTCTTCTTCTTCGCCGGTTGTTTCTCTTTCTTTCCCACCTCAGTCCTCTTCCGGCCGTCGGAACAACGCCGGCGACAATGAACATTATCCGATTTCAGATTGGTCTGAATTTTTCAATCATGCTGCCTCGTCGGGATGA

Protein sequence

MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAPSAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGGEIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSSSDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQFSSSSSSSPVVSLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG

Homology

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BLAST of Clc01G15620 vs. NCBI nr
Match: KAG6604257.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 523.1 bits (1346), Expect = 1.8e-144
Identity = 281/338 (83.14%), Postives = 303/338 (89.64%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPEDT++ EMLFLGFS EMEMSAMVSALTHVVAGDVPD D+Y DS W+ SSVSASA  
Sbjct: 1   MADPEDTRSSEMLFLGFSSEMEMSAMVSALTHVVAGDVPDRDAYYDSAWTSSSVSASAVA 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SAP+GGG +KRGRTLA+EDGGSVSTW  SSVISGDSSN VIIRPQTGS+AMENSVYEYGG
Sbjct: 61  SAPYGGGGHKRGRTLALEDGGSVSTWPQSSVISGDSSNGVIIRPQTGSLAMENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EIP TAE+PPARRKYRGVRQRPWGKWAAEIRDPYKA RVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EIPVTAEQPPARRKYRGVRQRPWGKWAAEIRDPYKATRVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLP     ATHFS+SNSTNTLLAIPTNSESIVHS+P  NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLP-----ATHFSNSNSTNTLLAIPTNSESIVHSQPILNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQFSSSSSSSPVV 300
           S+ SP  F+NFS+GQLQ PID YSEINFSSS+SM SPF+SS+ G +NSQFSSSSSSSP V
Sbjct: 241 SNASPVNFVNFSNGQLQPPIDTYSEINFSSSSSMASPFHSSTAGLSNSQFSSSSSSSPGV 300

Query: 301 SLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           SLSFPPQS SGRR++  D+E YP SDWSEFFNHAASSG
Sbjct: 301 SLSFPPQSVSGRRSS--DDEPYPTSDWSEFFNHAASSG 331

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BLAST of Clc01G15620 vs. NCBI nr
Match: XP_023545181.1 (ethylene-responsive transcription factor ABR1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.0 bits (1338), Expect = 1.5e-143
Identity = 280/338 (82.84%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPEDT++ EMLFLGFS EMEMSAMVSALTHVVAGDVPD D+Y DS W+ SSVSASA  
Sbjct: 1   MADPEDTRSSEMLFLGFSSEMEMSAMVSALTHVVAGDVPDRDAYYDSAWTSSSVSASAVA 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SAP+GGG +KRGRTLA EDGGSVSTWS SSVISGDSSN VIIRPQTGS+ MENSVYEYGG
Sbjct: 61  SAPYGGGGHKRGRTLAQEDGGSVSTWSQSSVISGDSSNGVIIRPQTGSLEMENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EIP TAE+PPARRKYRGVRQRPWGKWAAEIRDPYKA RVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EIPITAEQPPARRKYRGVRQRPWGKWAAEIRDPYKATRVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLP     ATHFS+SNSTNTLLAIPTNSESIVHS+P  NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLP-----ATHFSNSNSTNTLLAIPTNSESIVHSQPILNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQFSSSSSSSPVV 300
           S+ SP  F+NFS+GQLQ PID YSEINFSSS+SM SPF+SS+ G +NSQFSSS SSSP V
Sbjct: 241 SNASPVNFVNFSNGQLQPPIDTYSEINFSSSSSMASPFHSSTAGLSNSQFSSSPSSSPGV 300

Query: 301 SLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           SLSFPPQS SGRR++  D+E YP SDWSEFFNHAASSG
Sbjct: 301 SLSFPPQSVSGRRSS--DDEPYPTSDWSEFFNHAASSG 331

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BLAST of Clc01G15620 vs. NCBI nr
Match: XP_022950524.1 (ethylene-responsive transcription factor ABR1 [Cucurbita moschata])

HSP 1 Score: 516.9 bits (1330), Expect = 1.3e-142
Identity = 279/338 (82.54%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPEDT++ EMLFLGFS EMEMSAMVSALTHVVAGDVPD D+Y DS W+ SSVSASA  
Sbjct: 1   MADPEDTRSSEMLFLGFSSEMEMSAMVSALTHVVAGDVPDRDAYYDSAWTSSSVSASAVA 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SAP+G G +KRGRTLA+EDGGSVSTW  SSVISGDSSN VIIR QTGS+AMENSVYEYGG
Sbjct: 61  SAPYGRGGHKRGRTLALEDGGSVSTWPQSSVISGDSSNGVIIRSQTGSLAMENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EIP TAE+PPARRKYRGVRQRPWGKWAAEIRDPYKA RVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EIPVTAEQPPARRKYRGVRQRPWGKWAAEIRDPYKATRVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLP     ATHFS+SNSTNTLLAIPTNSESIVHS+P  NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLP-----ATHFSNSNSTNTLLAIPTNSESIVHSQPILNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQFSSSSSSSPVV 300
           S+ SP  F+NFS+GQLQ PID YSEINFSSS+SM SPF+SS+ G +NSQFSSSSSSSP V
Sbjct: 241 SNASPVNFVNFSNGQLQPPIDTYSEINFSSSSSMASPFHSSTAGLSNSQFSSSSSSSPGV 300

Query: 301 SLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           SLSFPPQS SGRR++  D+E YP SDWSEFFNHAASSG
Sbjct: 301 SLSFPPQSVSGRRSS--DDEPYPTSDWSEFFNHAASSG 331

[Close]

BLAST of Clc01G15620 vs. NCBI nr
Match: XP_004142046.1 (ethylene-responsive transcription factor ABR1 [Cucumis sativus])

HSP 1 Score: 511.9 bits (1317), Expect = 4.2e-141
Identity = 279/339 (82.30%), Postives = 296/339 (87.32%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPED KA EM FL FSREMEMSAMVSALTHVVAGD PD D+  DSTW+ SSVSA A  
Sbjct: 1   MADPEDNKASEM-FLNFSREMEMSAMVSALTHVVAGDTPDRDASYDSTWTSSSVSAPAET 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SA HGGG YKRGRTLA+E+GGSVS WSPSSVISG+SSN+VIIRPQTGS  +ENSVYEYGG
Sbjct: 61  SALHGGGGYKRGRTLALENGGSVSAWSPSSVISGNSSNVVIIRPQTGSATVENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EI T AEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EITTMAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLPTTES  THF++S+ TNTLLAIPT+SE IV  RPT NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLPTTESQTTHFTNSSPTNTLLAIPTHSEPIVSYRPTFNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQF-SSSSSSSPV 300
           SD SPA FLNFSDGQL  PIDMYSEI+FSSS+SM S FYSSS G +N QF SSSSSSSPV
Sbjct: 241 SDASPANFLNFSDGQLPPPIDMYSEIHFSSSSSMASSFYSSSAGLSNPQFSSSSSSSSPV 300

Query: 301 VSLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           VSLS PP S  GRRN+AGDNEHY  + WSEFFNHAASSG
Sbjct: 301 VSLSSPPLSFPGRRNSAGDNEHYSTAGWSEFFNHAASSG 338

[Close]

BLAST of Clc01G15620 vs. NCBI nr
Match: XP_008440983.1 (PREDICTED: ethylene-responsive transcription factor ABR1 [Cucumis melo] >KAA0025573.1 ethylene-responsive transcription factor ABR1 [Cucumis melo var. makuwa] >TYK12448.1 ethylene-responsive transcription factor ABR1 [Cucumis melo var. makuwa])

HSP 1 Score: 504.2 bits (1297), Expect = 8.7e-139
Identity = 273/340 (80.29%), Postives = 293/340 (86.18%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPED KA EM FL FSREMEMSAMVSALTHVVAGDVPD D+  DSTW+ SSVSA A P
Sbjct: 1   MADPEDNKASEM-FLNFSREMEMSAMVSALTHVVAGDVPDRDACYDSTWTSSSVSAPAEP 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           S  HGGG YKRGRTLA+EDGGSVSTW  S+ ISGDSSN+VI+RPQ+GS  +ENSVYEYGG
Sbjct: 61  SNLHGGGGYKRGRTLALEDGGSVSTWPSSAAISGDSSNVVIVRPQSGSATVENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EI T AEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EITTAAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLPTTE   THF++S+ TNT+LAIPT+SE IV  RPT NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLPTTEYPITHFTNSSPTNTVLAIPTHSEPIVSYRPTFNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQF--SSSSSSSP 300
           SD SP  FLNFSDGQLQTPIDMYSEINFSSS+SM S FYSSS G +N QF  SSSSSSSP
Sbjct: 241 SDASPGNFLNFSDGQLQTPIDMYSEINFSSSSSMASSFYSSSAGQSNPQFSSSSSSSSSP 300

Query: 301 VVSLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           +VSLSF P S  GRR++AGDNE Y  + WSEFFNHA SSG
Sbjct: 301 MVSLSFQPLSFPGRRDSAGDNEQYSTAGWSEFFNHATSSG 339

[Close]

BLAST of Clc01G15620 vs. ExPASy Swiss-Prot
Match: Q9FGF8 (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-43
Identity = 141/355 (39.72%), Postives = 187/355 (52.68%), Query Frame = 0


Query: 4   PEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAPSAP 63
           P  + +   L  GFSREMEMSA+VSALTHVVAG+VP               S     ++ 
Sbjct: 54  PPPSSSSSSLISGFSREMEMSAIVSALTHVVAGNVPQHQQ------GGGEGSGEGTSNSS 113

Query: 64  HGGGRYKRGRTLAMEDGG-----SVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEY 123
              G+ +R     +E+GG     + +T +     SG SS    +R  + +++     YEY
Sbjct: 114 SSSGQKRRRE---VEEGGAKAVKAANTLTVDQYFSGGSSTSK-VREASSNMSGPGPTYEY 173

Query: 124 GGEIPTTAEE-----PPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARA 183
                 ++E         RR+YRGVRQRPWGKWAAEIRDP+KAARVWLGTFD AESAARA
Sbjct: 174 TTTATASSETSSFSGDQPRRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARA 233

Query: 184 YDEAALRFRGNKAKLNFPENVRLRQLPTTESSATHFS---------SSNSTNTLLAIPTN 243
           YDEAALRFRGNKAKLNFPENV+L +  +TE+   H +         +S ST TLL I   
Sbjct: 234 YDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPA 293

Query: 244 SESIVHSRPTANLQSSSDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYG 303
           S   VHS+P     + S +  A+         Q  +D+Y +++F      P  F  +   
Sbjct: 294 SNQSVHSQPLMQSYNLSYSEMARQQQQFQQHHQQSLDLYDQMSF------PLRFGHTGGS 353

Query: 304 STNSQFSSSSSSSPVVSLSF--PPQSSSGRRNNAGDNEHYPISDWSEFFNHAASS 338
              S  SSSS S P+ S +   PP  S+       D + +P    S  +N++ SS
Sbjct: 354 MMQSTSSSSSHSRPLFSPAAVQPPPESASETGYLQDIQ-WPSDKTSNNYNNSPSS 391

[Close]

BLAST of Clc01G15620 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-29
Identity = 92/178 (51.69%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 23  MSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAPSAPHGGGRYKRGRTLAMEDGGS 82
           MSAMVSALT VV+              + S   A  A S+    G +KRG        G 
Sbjct: 1   MSAMVSALTQVVS--------------ARSQTEAEGAHSSSSSAG-HKRGWL------GI 60

Query: 83  VSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGGEIPTTAEEPPARRKYRGVRQRP 142
            S   PSS    DSS+  I          E S+ +     P  A E   +R+YRGVRQRP
Sbjct: 61  DSAPIPSSFARVDSSHNPI----------EESMSK---AFPEEARE--KKRRYRGVRQRP 120

Query: 143 WGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKAKLNFPENVRLRQLP 201
           WGKWAAEIRDP++AARVWLGTFDTAE+AARAYDEAALRFRGNKAKLNFPE+VR+   P
Sbjct: 121 WGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPPP 142

[Close]

BLAST of Clc01G15620 vs. ExPASy Swiss-Prot
Match: Q7G1L2 (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 8.7e-25
Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 133 RKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKAKLNFPE 192
           +KYRGVRQRPWGKWAAEIRDP+KA RVWLGTF+TAE+AARAYD AALRFRG+KAKLNFPE
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118

Query: 193 NVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSR 233
           NV  +    T    +HF  ++   +L  I      + +SR
Sbjct: 119 NVGTQ----TIQRNSHFLQNSMQPSLTYIDQCPTLLSYSR 154

[Close]

BLAST of Clc01G15620 vs. ExPASy Swiss-Prot
Match: Q9LYU3 (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.6e-24
Identity = 89/200 (44.50%), Postives = 107/200 (53.50%), Query Frame = 0


Query: 127 EEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKA 186
           ++ P RR YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE AA AYD AAL+F+G KA
Sbjct: 31  QDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKA 90

Query: 187 KLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSSSDTSPA 246
           KLNFPE V   Q PTT ++ +H           A    SES+    P     S++ TS  
Sbjct: 91  KLNFPERV---QGPTTTTTISH-----------APRGVSESMNSPPPRPGPPSTTTTSWP 150

Query: 247 KFLNFSDGQLQTPIDMYSEINFS--SSTSMPSPFYSSSYGSTNSQFSSSSSSSPVVSLSF 306
              N    Q    +   +E++ S  +ST    PF      ST S  SSSS  +    L  
Sbjct: 151 MTYNQDILQYAQLLTSNNEVDLSYYTSTLFSQPF------STPSSSSSSSQQTQQQQLQQ 210

Query: 307 PPQSSSGRRNNAGDNEH-YP 324
             Q       N G N + YP
Sbjct: 211 QQQQREEEEKNYGYNYYNYP 210

[Close]

BLAST of Clc01G15620 vs. ExPASy Swiss-Prot
Match: Q9LY29 (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-23
Identity = 76/170 (44.71%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 123 PTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFR 182
           PT  +    +R YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE+AA AYD AAL+F+
Sbjct: 80  PTQDQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFK 139

Query: 183 GNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRP---TANLQS 242
           G+KAKLNFPE  +L    +T +   ++ SSN+        TN ++I +         L  
Sbjct: 140 GSKAKLNFPERAQLASNTSTTTGPPNYYSSNNQIYYSNPQTNPQTIPYFNQYYYNQYLHQ 199

Query: 243 SSDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQ 290
             +++ A  L++S    +T   MY+    S++ S      SSS GS+  Q
Sbjct: 200 GGNSNDA--LSYSLAGGETGGSMYNHQTLSTTNS------SSSGGSSRQQ 241

[Close]

BLAST of Clc01G15620 vs. ExPASy TrEMBL
Match: A0A6J1GG23 (ethylene-responsive transcription factor ABR1 OS=Cucurbita moschata OX=3662 GN=LOC111453608 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 6.3e-143
Identity = 279/338 (82.54%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPEDT++ EMLFLGFS EMEMSAMVSALTHVVAGDVPD D+Y DS W+ SSVSASA  
Sbjct: 1   MADPEDTRSSEMLFLGFSSEMEMSAMVSALTHVVAGDVPDRDAYYDSAWTSSSVSASAVA 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SAP+G G +KRGRTLA+EDGGSVSTW  SSVISGDSSN VIIR QTGS+AMENSVYEYGG
Sbjct: 61  SAPYGRGGHKRGRTLALEDGGSVSTWPQSSVISGDSSNGVIIRSQTGSLAMENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EIP TAE+PPARRKYRGVRQRPWGKWAAEIRDPYKA RVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EIPVTAEQPPARRKYRGVRQRPWGKWAAEIRDPYKATRVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLP     ATHFS+SNSTNTLLAIPTNSESIVHS+P  NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLP-----ATHFSNSNSTNTLLAIPTNSESIVHSQPILNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQFSSSSSSSPVV 300
           S+ SP  F+NFS+GQLQ PID YSEINFSSS+SM SPF+SS+ G +NSQFSSSSSSSP V
Sbjct: 241 SNASPVNFVNFSNGQLQPPIDTYSEINFSSSSSMASPFHSSTAGLSNSQFSSSSSSSPGV 300

Query: 301 SLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           SLSFPPQS SGRR++  D+E YP SDWSEFFNHAASSG
Sbjct: 301 SLSFPPQSVSGRRSS--DDEPYPTSDWSEFFNHAASSG 331

[Close]

BLAST of Clc01G15620 vs. ExPASy TrEMBL
Match: A0A0A0KKX4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486790 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.0e-141
Identity = 279/339 (82.30%), Postives = 296/339 (87.32%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPED KA EM FL FSREMEMSAMVSALTHVVAGD PD D+  DSTW+ SSVSA A  
Sbjct: 1   MADPEDNKASEM-FLNFSREMEMSAMVSALTHVVAGDTPDRDASYDSTWTSSSVSAPAET 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SA HGGG YKRGRTLA+E+GGSVS WSPSSVISG+SSN+VIIRPQTGS  +ENSVYEYGG
Sbjct: 61  SALHGGGGYKRGRTLALENGGSVSAWSPSSVISGNSSNVVIIRPQTGSATVENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EI T AEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EITTMAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLPTTES  THF++S+ TNTLLAIPT+SE IV  RPT NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLPTTESQTTHFTNSSPTNTLLAIPTHSEPIVSYRPTFNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQF-SSSSSSSPV 300
           SD SPA FLNFSDGQL  PIDMYSEI+FSSS+SM S FYSSS G +N QF SSSSSSSPV
Sbjct: 241 SDASPANFLNFSDGQLPPPIDMYSEIHFSSSSSMASSFYSSSAGLSNPQFSSSSSSSSPV 300

Query: 301 VSLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           VSLS PP S  GRRN+AGDNEHY  + WSEFFNHAASSG
Sbjct: 301 VSLSSPPLSFPGRRNSAGDNEHYSTAGWSEFFNHAASSG 338

[Close]

BLAST of Clc01G15620 vs. ExPASy TrEMBL
Match: A0A5A7SLN1 (Ethylene-responsive transcription factor ABR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00230 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.2e-139
Identity = 273/340 (80.29%), Postives = 293/340 (86.18%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPED KA EM FL FSREMEMSAMVSALTHVVAGDVPD D+  DSTW+ SSVSA A P
Sbjct: 1   MADPEDNKASEM-FLNFSREMEMSAMVSALTHVVAGDVPDRDACYDSTWTSSSVSAPAEP 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           S  HGGG YKRGRTLA+EDGGSVSTW  S+ ISGDSSN+VI+RPQ+GS  +ENSVYEYGG
Sbjct: 61  SNLHGGGGYKRGRTLALEDGGSVSTWPSSAAISGDSSNVVIVRPQSGSATVENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EI T AEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EITTAAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLPTTE   THF++S+ TNT+LAIPT+SE IV  RPT NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLPTTEYPITHFTNSSPTNTVLAIPTHSEPIVSYRPTFNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQF--SSSSSSSP 300
           SD SP  FLNFSDGQLQTPIDMYSEINFSSS+SM S FYSSS G +N QF  SSSSSSSP
Sbjct: 241 SDASPGNFLNFSDGQLQTPIDMYSEINFSSSSSMASSFYSSSAGQSNPQFSSSSSSSSSP 300

Query: 301 VVSLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           +VSLSF P S  GRR++AGDNE Y  + WSEFFNHA SSG
Sbjct: 301 MVSLSFQPLSFPGRRDSAGDNEQYSTAGWSEFFNHATSSG 339

[Close]

BLAST of Clc01G15620 vs. ExPASy TrEMBL
Match: A0A1S3B312 (ethylene-responsive transcription factor ABR1 OS=Cucumis melo OX=3656 GN=LOC103485232 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.2e-139
Identity = 273/340 (80.29%), Postives = 293/340 (86.18%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPED KA EM FL FSREMEMSAMVSALTHVVAGDVPD D+  DSTW+ SSVSA A P
Sbjct: 1   MADPEDNKASEM-FLNFSREMEMSAMVSALTHVVAGDVPDRDACYDSTWTSSSVSAPAEP 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           S  HGGG YKRGRTLA+EDGGSVSTW  S+ ISGDSSN+VI+RPQ+GS  +ENSVYEYGG
Sbjct: 61  SNLHGGGGYKRGRTLALEDGGSVSTWPSSAAISGDSSNVVIVRPQSGSATVENSVYEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EI T AEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR
Sbjct: 121 EITTAAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQLPTTE   THF++S+ TNT+LAIPT+SE IV  RPT NLQSS
Sbjct: 181 FRGSKAKLNFPENVRLRQLPTTEYPITHFTNSSPTNTVLAIPTHSEPIVSYRPTFNLQSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQF--SSSSSSSP 300
           SD SP  FLNFSDGQLQTPIDMYSEINFSSS+SM S FYSSS G +N QF  SSSSSSSP
Sbjct: 241 SDASPGNFLNFSDGQLQTPIDMYSEINFSSSSSMASSFYSSSAGQSNPQFSSSSSSSSSP 300

Query: 301 VVSLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           +VSLSF P S  GRR++AGDNE Y  + WSEFFNHA SSG
Sbjct: 301 MVSLSFQPLSFPGRRDSAGDNEQYSTAGWSEFFNHATSSG 339

[Close]

BLAST of Clc01G15620 vs. ExPASy TrEMBL
Match: A0A6J1IRD6 (ethylene-responsive transcription factor ABR1 OS=Cucurbita maxima OX=3661 GN=LOC111477784 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.8e-137
Identity = 271/338 (80.18%), Postives = 295/338 (87.28%), Query Frame = 0


Query: 1   MADPEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAP 60
           MADPEDT++ EMLFLGFS EMEMSAMVSALTHVVAGDVPD D+Y DS W+ SSVSASA  
Sbjct: 1   MADPEDTRSSEMLFLGFSSEMEMSAMVSALTHVVAGDVPDRDAYYDSAWTSSSVSASAVA 60

Query: 61  SAPHGGGRYKRGRTLAMEDGGSVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGG 120
           SAP+GGG +KRGRTLA+EDGGSVSTW  SSVISGDSSN V  RPQTGS+AMENSV+EYGG
Sbjct: 61  SAPYGGGGHKRGRTLALEDGGSVSTWPQSSVISGDSSNGVTKRPQTGSLAMENSVFEYGG 120

Query: 121 EIPTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALR 180
           EIP TAE+PPARRKYRGVRQRPWGKWAAEIRDP KA R+WLGTFDTAESAARAYDEAALR
Sbjct: 121 EIPITAEQPPARRKYRGVRQRPWGKWAAEIRDPNKATRLWLGTFDTAESAARAYDEAALR 180

Query: 181 FRGNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSS 240
           FRG+KAKLNFPENVRLRQ P     ATHFS+SNSTNTLLAIPTNSESIVHS+P  NL SS
Sbjct: 181 FRGSKAKLNFPENVRLRQSP-----ATHFSNSNSTNTLLAIPTNSESIVHSQPILNLPSS 240

Query: 241 SDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQFSSSSSSSPVV 300
           S  SP  F+NFS+GQLQ PID +SEINFSSS+SM SPF+SS+   +NSQFSSSSSSSP V
Sbjct: 241 SIASPVNFINFSNGQLQPPIDTFSEINFSSSSSMASPFHSSTARLSNSQFSSSSSSSPGV 300

Query: 301 SLSFPPQSSSGRRNNAGDNEHYPISDWSEFFNHAASSG 339
           SLSFPPQS SGR ++  DNE +P SDWSEFFNHAASSG
Sbjct: 301 SLSFPPQSVSGRWSS--DNEPFPTSDWSEFFNHAASSG 331

[Close]

BLAST of Clc01G15620 vs. TAIR 10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-44
Identity = 141/355 (39.72%), Postives = 187/355 (52.68%), Query Frame = 0


Query: 4   PEDTKAPEMLFLGFSREMEMSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAPSAP 63
           P  + +   L  GFSREMEMSA+VSALTHVVAG+VP               S     ++ 
Sbjct: 54  PPPSSSSSSLISGFSREMEMSAIVSALTHVVAGNVPQHQQ------GGGEGSGEGTSNSS 113

Query: 64  HGGGRYKRGRTLAMEDGG-----SVSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEY 123
              G+ +R     +E+GG     + +T +     SG SS    +R  + +++     YEY
Sbjct: 114 SSSGQKRRRE---VEEGGAKAVKAANTLTVDQYFSGGSSTSK-VREASSNMSGPGPTYEY 173

Query: 124 GGEIPTTAEE-----PPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARA 183
                 ++E         RR+YRGVRQRPWGKWAAEIRDP+KAARVWLGTFD AESAARA
Sbjct: 174 TTTATASSETSSFSGDQPRRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARA 233

Query: 184 YDEAALRFRGNKAKLNFPENVRLRQLPTTESSATHFS---------SSNSTNTLLAIPTN 243
           YDEAALRFRGNKAKLNFPENV+L +  +TE+   H +         +S ST TLL I   
Sbjct: 234 YDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPA 293

Query: 244 SESIVHSRPTANLQSSSDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYG 303
           S   VHS+P     + S +  A+         Q  +D+Y +++F      P  F  +   
Sbjct: 294 SNQSVHSQPLMQSYNLSYSEMARQQQQFQQHHQQSLDLYDQMSF------PLRFGHTGGS 353

Query: 304 STNSQFSSSSSSSPVVSLSF--PPQSSSGRRNNAGDNEHYPISDWSEFFNHAASS 338
              S  SSSS S P+ S +   PP  S+       D + +P    S  +N++ SS
Sbjct: 354 MMQSTSSSSSHSRPLFSPAAVQPPPESASETGYLQDIQ-WPSDKTSNNYNNSPSS 391

[Close]

BLAST of Clc01G15620 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-30
Identity = 92/178 (51.69%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 23  MSAMVSALTHVVAGDVPDSDSYCDSTWSFSSVSASAAPSAPHGGGRYKRGRTLAMEDGGS 82
           MSAMVSALT VV+              + S   A  A S+    G +KRG        G 
Sbjct: 1   MSAMVSALTQVVS--------------ARSQTEAEGAHSSSSSAG-HKRGWL------GI 60

Query: 83  VSTWSPSSVISGDSSNLVIIRPQTGSVAMENSVYEYGGEIPTTAEEPPARRKYRGVRQRP 142
            S   PSS    DSS+  I          E S+ +     P  A E   +R+YRGVRQRP
Sbjct: 61  DSAPIPSSFARVDSSHNPI----------EESMSK---AFPEEARE--KKRRYRGVRQRP 120

Query: 143 WGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKAKLNFPENVRLRQLP 201
           WGKWAAEIRDP++AARVWLGTFDTAE+AARAYDEAALRFRGNKAKLNFPE+VR+   P
Sbjct: 121 WGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPPP 142

[Close]

BLAST of Clc01G15620 vs. TAIR 10
Match: AT1G43160.1 (related to AP2 6 )

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-26
Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 133 RKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKAKLNFPE 192
           +KYRGVRQRPWGKWAAEIRDP+KA RVWLGTF+TAE+AARAYD AALRFRG+KAKLNFPE
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118

Query: 193 NVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSR 233
           NV  +    T    +HF  ++   +L  I      + +SR
Sbjct: 119 NVGTQ----TIQRNSHFLQNSMQPSLTYIDQCPTLLSYSR 154

[Close]

BLAST of Clc01G15620 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-25
Identity = 89/200 (44.50%), Postives = 107/200 (53.50%), Query Frame = 0


Query: 127 EEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFRGNKA 186
           ++ P RR YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE AA AYD AAL+F+G KA
Sbjct: 31  QDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKA 90

Query: 187 KLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRPTANLQSSSDTSPA 246
           KLNFPE V   Q PTT ++ +H           A    SES+    P     S++ TS  
Sbjct: 91  KLNFPERV---QGPTTTTTISH-----------APRGVSESMNSPPPRPGPPSTTTTSWP 150

Query: 247 KFLNFSDGQLQTPIDMYSEINFS--SSTSMPSPFYSSSYGSTNSQFSSSSSSSPVVSLSF 306
              N    Q    +   +E++ S  +ST    PF      ST S  SSSS  +    L  
Sbjct: 151 MTYNQDILQYAQLLTSNNEVDLSYYTSTLFSQPF------STPSSSSSSSQQTQQQQLQQ 210

Query: 307 PPQSSSGRRNNAGDNEH-YP 324
             Q       N G N + YP
Sbjct: 211 QQQQREEEEKNYGYNYYNYP 210

[Close]

BLAST of Clc01G15620 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-24
Identity = 76/170 (44.71%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 123 PTTAEEPPARRKYRGVRQRPWGKWAAEIRDPYKAARVWLGTFDTAESAARAYDEAALRFR 182
           PT  +    +R YRGVRQRPWGKWAAEIRDP KAARVWLGTF+TAE+AA AYD AAL+F+
Sbjct: 80  PTQDQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFK 139

Query: 183 GNKAKLNFPENVRLRQLPTTESSATHFSSSNSTNTLLAIPTNSESIVHSRP---TANLQS 242
           G+KAKLNFPE  +L    +T +   ++ SSN+        TN ++I +         L  
Sbjct: 140 GSKAKLNFPERAQLASNTSTTTGPPNYYSSNNQIYYSNPQTNPQTIPYFNQYYYNQYLHQ 199

Query: 243 SSDTSPAKFLNFSDGQLQTPIDMYSEINFSSSTSMPSPFYSSSYGSTNSQ 290
             +++ A  L++S    +T   MY+    S++ S      SSS GS+  Q
Sbjct: 200 GGNSNDA--LSYSLAGGETGGSMYNHQTLSTTNS------SSSGGSSRQQ 241

The following BLAST results are available for this feature:

BLAST of Clc01G15620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604257.1	1.8e-144	83.14	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023545181.1	1.5e-143	82.84	ethylene-responsive transcription factor ABR1 [Cucurbita pepo subsp. pepo]	[more]
XP_022950524.1	1.3e-142	82.54	ethylene-responsive transcription factor ABR1 [Cucurbita moschata]	[more]
XP_004142046.1	4.2e-141	82.30	ethylene-responsive transcription factor ABR1 [Cucumis sativus]	[more]
XP_008440983.1	8.7e-139	80.29	PREDICTED: ethylene-responsive transcription factor ABR1 [Cucumis melo] >KAA0025...	[more]

BLAST of Clc01G15620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGF8	3.2e-43	39.72	Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q70II3	2.0e-29	51.69	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7G1L2	8.7e-25	62.00	Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYU3	9.6e-24	44.50	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LY29	2.8e-23	44.71	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc01G15620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GG23	6.3e-143	82.54	ethylene-responsive transcription factor ABR1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0KKX4	2.0e-141	82.30	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486790 PE=...	[more]
A0A5A7SLN1	4.2e-139	80.29	Ethylene-responsive transcription factor ABR1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B312	4.2e-139	80.29	ethylene-responsive transcription factor ABR1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1IRD6	1.8e-137	80.18	ethylene-responsive transcription factor ABR1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Clc01G15620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64750.1	2.3e-44	39.72	Integrase-type DNA-binding superfamily protein	[more]
AT5G50080.1	1.4e-30	51.69	ethylene response factor 110	[more]
AT1G43160.1	6.2e-26	62.00	related to AP2 6	[more]
AT5G13330.1	6.8e-25	44.50	related to AP2 6l	[more]
AT5G07310.1	2.0e-24	44.71	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 135..146 score: 76.67 coord: 157..173 score: 72.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 134..197 e-value: 2.4E-36 score: 136.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 134..183 e-value: 5.6E-15 score: 55.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 134..191 score: 25.488174
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 134..193 e-value: 7.41208E-35 score: 119.684
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 133..193 e-value: 3.8E-28 score: 99.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..316
None	No IPR available	PANTHER	PTHR31190:SF262	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110	coord: 18..314
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 18..314
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 134..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G15620.1	Clc01G15620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity