Clc01G14980 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAGAAATATAGAAGTAGATTAAAATGGTATGAACTAAAATAATATTTTAATATTCTTTCTAAAGGAAAAGAAAAAAGAAAAAAGAAAAAGAATGCCCCTTGGTTCTTACTTCTGTTCCCAATTTGTAATTGTGCCTAAAACGCCACAGTAAAAGTCAGTCAGCAGAAAATGGCGAACTCCGATGAAGCAAAGCTCGAACTGTTCCTCCAATGGTTACAGGTATAATGGTAAACTCGTGCTCAGTTTCCTGAACAGGAACCAAAAGAAAATGACGTCAGAAAATTAAGCAGCTTAGTGGTTTCAGCTTCCATGATTCCAGAAACCCCTTCCATCTTTTTCTGCTTTTCATTAATTGGGATTCAATTCAGGTTAACGGAGCAGACCTTCGAGGTTGCATGATCAAGTACAGCGATTTAAGCAAAGGATGTGGACTTTTTTCTGCCAACGATGCCTCTGATGGTATTCTTAATTTCGATTTTCTGTTTATCCACATTAATATATGTTCATGCGGTAGTATTTGAGTCTGAAGCCAAATTGTTTTGTAGTTTTTAGCTTTCGCTGTTGTTTGATTATTTGGGAAAAAATAAATGTCGGGCTCGAAAGCTCATGAATTTCTATGTGGAGAGTTATGATTTTAAAGTTTATTTTTTTTTACAAACGGTCCATTTTGGAAATGATTTTTAACTTCGTAGATGTGCCATTCAAATAATTCTAACTAAAGGCGTCTATTTGAAGAATATGGAAAAAAGAAAAAGAAAAATAGTTTCTTTTTCATAAAAATGAATTCTATCCACCTTGATGTTGGTGGTAGGATTTTCATTAACAGTAAATCTGGTTTTTCCATTGGGGGTGGTGATTGAGTTCCTGCTGAGTAGCTCTGGTGATGAAGTCAATGGAATTGACATAATACTCTTAAAGTATTTGGTGGACGGGCAGAGTTAATTTAAAGTAGAAAGAAATAGTAATATTCTTTTTGGAAGGACTTTTGGGCGCTGAACTTGTTGCTACATAGCCAATTTCCTTGGCTCTTTGTTCTCTGTGATGAGAATGAATTGATGATAGACAGCACATCAGTCGCTGGTAATGTGATGAGGATGTGTTGGGTCCTTAATCCTAGAAGGGGTCTTAATGAGCTAGAATTCTCCCGAGTGGATCCTTGCTATGAAACTGTGAGCCTTCCAACAGCCAAGATTAGAAAGAGTTGACTGGTAAAAGCTCAGGTGTTTTCTTTTCCAAGTCCGTTTTTCTTGAAATTTTGCAGTGGGTAGAAATACAGTCTTCAAAGTTACAAATTTTCTTTGATCTTAACACTTATAGGTATCAACATTTAGCATACGAGATAGTTTCCAGACCAAACACCATCAAATGTCCCTCTCGTATTGCTACTTATGCAAGGAACATTGGGAAACCTCAGACGTATCTTCTGGTGTTTCCTTTCTATTTTTGAGTTGCCTCTTCTTGAAAGGACTTCAGAAGTTTTCTGATCATCAATCTTTCTAGCCAAGGGTTCAAAGGCAAGGGGAACGTGCTTTAGAACATCATGGTCAAGAGCTTTTTGTGGTAAGTTTAGAAGGAAAGAAATATAGGAAATATTCCAACACTTAGAAAAGGAGGCGTCTACTTGAGAAAACGTAGTTCTGACTGCTGCTTGTTGGTCAAGTATTCCTTTTGTACTTGGTACTTGATGTGTATGTGCACCAACTGGAAATCATTTTCTTAACTTCCTTTCACTTTTCCTTGTTATTGTCATTAATCATTCTATCCACGAAAGTTTAGTTTCTTACTAAAAAGAAAATTTACTTAACTTGCTTTTGGAATCATATTGGTTAGCAGTAGTACTTCAGGGTAACTTTTGTCCATAATTTCTCAGTTTCCTCAGGGAAATAGATAATTTTCTTACTTGTGCAGGGGTTCTATTAGTCGTTCCCCTAGATTTAGCAATCACTCCAATGAGAGTTTTGCAAGATCCTCTTTATGGACCAGAGTGTAGAGCAATGTATGAAGAAGATGAAGTAGATGATAGATTTCTGATGATTTTATTCCTCATGGTTGAGTGGCTGCGTGAAAATTCTTCATGGAAACCGTATGTACTTTAACATTCTTAAGTTATGTTTATGATGAACATTCTTTCTAAATGATCATTTATTTTTCTGTCTTATGGTTGGTGAGAGCTCAGTGATTTATTATTAGGTACCTTGATGTGCTTCCTACCAGATTTGGGAATCCACTTTGGTTTACTGATAACGAGCTTTTGGAACTGAAGGGTACCACACTCTATCGAGCAACTGAACTGCAGGTGCAAAGTTCATTTGGAATATGTTATATAAAACCTTATTGTTAGTTCACTACAGAATAGTTGCTACTCTCTCATCACCTGAAGAAATGGAGTCAAACTATAGATATTGTTGAATACCATTTATGATCAATCTTCATGATCAACTGCATGATTATGAGTCTCAAGGTTGCACATTAAAATGATGGTTAATGCAGTTGTAGTTCTACACCAATTGACCTAAATTTAGTTTTGTTTTCCAAATGGATGCCCCCGCCCCAACCACCCACACACGGAGAATCACACTGTATGTGGTTATACGAATTATCATGTTCTGCATTTCAATTTTATGGCAATGTCTCATACTGCCTGTTGACCAAGAAACAATTATTTTTTTCTTTTTTGCAGAAAAATTCATTGCAGTCATTGTATGAAAATAAAGTGAAGAAATTGGTTAATAGATTGTTGACTATTGAAGGGTTTTCAGTAAGGTTTGTAGAACTTGGATGTCATTTCTCCTTCTACTTCATACTGATTCTTGGAAACAGTTCTATTTATACTGTATGTCCTTAGAAAATGCGAGTCTGTTTTGTCCACTTTCTCCATCCCCCTCTATCAAAATCAAAAAAAAGGAGGCGAGCTTTGCTTCTTTATTCCCGTGTTCGATCTCTTCCATCTCTGCCTCACTCGTTGTCACCTAGAGTTGAAGAAAGGTTTGGAACCCTGTAGAGAATGAAGAGGGGCCAAACATCTGCCTCTCAACAGTGCTTCTTGAGACTTTCCTACTCTGATATAAGGACCATGTCTTCTTATTCTTTAAGTTCCTCTTTCTGAGTAACCATAAAACCTTTGAAGGGGTTGAGAGGTCCTCCGATGTGTATTTCCTGGTTAGATCCATTCCATGAATCTCCATGGTCTTTGGTATTTGAAGTGTTTGTAATTATCTTTGAAGTCTTATTTGGCTTGATTGGAGTCCCTTTTTATTACTTGGCTCCTTTTGTTTCGAGTTTTTTTATACCCTATTATTTCTTTCATTTGTTCTTAATGAAAGCTTCTTTCTTTTTCTCTTTTTATTTTATTTTTTAAGTTAGAGTTTTGCACGGTCTGTTTTTGTATCTGGTGTTTGTATGCTATTCGTTGGTGCAAAGGGCAAGCCAGTTTATGTGCTATATTCTGTTTTATTTTTCCAGGGAGGTGAGCTTTGAAGATTTCCTATGGTATGCAACTTAGCAGGATAGTTTTATCTAACCTTATTCAATGGCCTCTGCTTAACTATCCATTCATTGTTTCATCAAAGATTGAACATGATTGCTTTTTGTAGGGCAAATTCCATTTTCTGGGCACGTGCCTTGAACATCCAATGCACATGA TAGAAATATAGAAGTAGATTAAAATGGTATGAACTAAAATAATATTTTAATATTCTTTCTAAAGGAAAAGAAAAAAGAAAAAAGAAAAAGAATGCCCCTTGGTTCTTACTTCTGTTCCCAATTTGTAATTGTGCCTAAAACGCCACAGTAAAAGTCAGTCAGCAGAAAATGGCGAACTCCGATGAAGCAAAGCTCGAACTGTTCCTCCAATGGTTACAGGTTAACGGAGCAGACCTTCGAGGTTGCATGATCAAGTACAGCGATTTAAGCAAAGGATGTGGACTTTTTTCTGCCAACGATGCCTCTGATGGGGTTCTATTAGTCGTTCCCCTAGATTTAGCAATCACTCCAATGAGAGTTTTGCAAGATCCTCTTTATGGACCAGAGTGTAGAGCAATGTATGAAGAAGATGAAGTAGATGATAGATTTCTGATGATTTTATTCCTCATGGTTGAGTGGCTGCGTGAAAATTCTTCATGGAAACCGTACCTTGATGTGCTTCCTACCAGATTTGGGAATCCACTTTGGTTTACTGATAACGAGCTTTTGGAACTGAAGGGTACCACACTCTATCGAGCAACTGAACTGCAGAAAAATTCATTGCAGTCATTGTATGAAAATAAAGTGAAGAAATTGGTTAATAGATTGTTGACTATTGAAGGGTTTTCAGTAAGGGAGGTGAGCTTTGAAGATTTCCTATGGGCAAATTCCATTTTCTGGGCACGTGCCTTGAACATCCAATGCACATGA ATGGCGAACTCCGATGAAGCAAAGCTCGAACTGTTCCTCCAATGGTTACAGGTTAACGGAGCAGACCTTCGAGGTTGCATGATCAAGTACAGCGATTTAAGCAAAGGATGTGGACTTTTTTCTGCCAACGATGCCTCTGATGGGGTTCTATTAGTCGTTCCCCTAGATTTAGCAATCACTCCAATGAGAGTTTTGCAAGATCCTCTTTATGGACCAGAGTGTAGAGCAATGTATGAAGAAGATGAAGTAGATGATAGATTTCTGATGATTTTATTCCTCATGGTTGAGTGGCTGCGTGAAAATTCTTCATGGAAACCGTACCTTGATGTGCTTCCTACCAGATTTGGGAATCCACTTTGGTTTACTGATAACGAGCTTTTGGAACTGAAGGGTACCACACTCTATCGAGCAACTGAACTGCAGAAAAATTCATTGCAGTCATTGTATGAAAATAAAGTGAAGAAATTGGTTAATAGATTGTTGACTATTGAAGGGTTTTCAGTAAGGGAGGTGAGCTTTGAAGATTTCCTATGGGCAAATTCCATTTTCTGGGCACGTGCCTTGAACATCCAATGCACATGA MANSDEAKLELFLQWLQVNGADLRGCMIKYSDLSKGCGLFSANDASDGVLLVVPLDLAITPMRVLQDPLYGPECRAMYEEDEVDDRFLMILFLMVEWLRENSSWKPYLDVLPTRFGNPLWFTDNELLELKGTTLYRATELQKNSLQSLYENKVKKLVNRLLTIEGFSVREVSFEDFLWANSIFWARALNIQCT Homology
BLAST of Clc01G14980 vs. NCBI nr
Match: XP_008462641.1 (PREDICTED: uncharacterized protein LOC103500952 isoform X2 [Cucumis melo]) HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. NCBI nr
Match: TYK07464.1 (SET domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. NCBI nr
Match: XP_016902908.1 (PREDICTED: uncharacterized protein LOC103500952 isoform X3 [Cucumis melo]) HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. NCBI nr
Match: XP_016902907.1 (PREDICTED: uncharacterized protein LOC103500952 isoform X1 [Cucumis melo]) HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. NCBI nr
Match: XP_038881850.1 (protein-lysine N-methyltransferase EFM1 isoform X2 [Benincasa hispida]) HSP 1 Score: 367.9 bits (943), Expect = 5.5e-98 Identity = 181/190 (95.26%), Postives = 184/190 (96.84%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy Swiss-Prot
Match: Q43088 (Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum OX=3888 GN=RBCMT PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12 Identity = 56/183 (30.60%), Postives = 91/183 (49.73%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy Swiss-Prot
Match: P94026 (Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RBCMT PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11 Identity = 51/182 (28.02%), Postives = 89/182 (48.90%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy Swiss-Prot
Match: Q9XI84 ([Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LSMT-L PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.3e-11 Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy Swiss-Prot
Match: E2RBS6 (Actin-histidine N-methyltransferase OS=Canis lupus familiaris OX=9615 GN=SETD3 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.7e-07 Identity = 47/184 (25.54%), Postives = 88/184 (47.83%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy Swiss-Prot
Match: A9X1D0 (Actin-histidine N-methyltransferase OS=Papio anubis OX=9555 GN=SETD3 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 8.0e-07 Identity = 47/184 (25.54%), Postives = 87/184 (47.28%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy TrEMBL
Match: A0A5D3C897 (SET domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001950 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy TrEMBL
Match: A0A1S4E3V3 (uncharacterized protein LOC103500952 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500952 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy TrEMBL
Match: A0A1S4E3V9 (uncharacterized protein LOC103500952 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500952 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy TrEMBL
Match: A0A1S3CHD9 (uncharacterized protein LOC103500952 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500952 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99 Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of Clc01G14980 vs. ExPASy TrEMBL
Match: A0A0A0KIV6 (SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476080 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96 Identity = 178/190 (93.68%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of Clc01G14980 vs. TAIR 10
Match: AT1G01920.1 (SET domain-containing protein ) HSP 1 Score: 275.0 bits (702), Expect = 4.5e-74 Identity = 134/190 (70.53%), Postives = 158/190 (83.16%), Query Frame = 0
BLAST of Clc01G14980 vs. TAIR 10
Match: AT1G01920.2 (SET domain-containing protein ) HSP 1 Score: 275.0 bits (702), Expect = 4.5e-74 Identity = 134/190 (70.53%), Postives = 158/190 (83.16%), Query Frame = 0
BLAST of Clc01G14980 vs. TAIR 10
Match: AT1G14030.1 (Rubisco methyltransferase family protein ) HSP 1 Score: 69.3 bits (168), Expect = 3.8e-12 Identity = 56/181 (30.94%), Postives = 89/181 (49.17%), Query Frame = 0
BLAST of Clc01G14980 vs. TAIR 10
Match: AT3G56570.1 (SET domain-containing protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04 Identity = 43/188 (22.87%), Postives = 78/188 (41.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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