Clc01G12610 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G12610
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPMD domain-containing protein
LocationClcChr01: 23546254 .. 23551243 (+)
RNA-Seq ExpressionClc01G12610
SyntenyClc01G12610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTGAAACGAATACTGGACGAAGATGAAAAAAGCGACAGCTGCTGTAACTCTCGGAGAAAAATAGAAGAAGAAGTTAGTGATACTTGCAGAACTCAATGGAATAATGGAAGAATGTGTGAGAGTGACCGTCCATTAGTACCCTTGCATTCAATTTTGTTGGTATAATGGTAGTTGGCATTGATTGATTCTGGAAAATGCTGGTGATGAAGGCTTCGACATTCAATGTAATCAATTTCGGGGGAGAGAGAAAGTTATGGGCTCATTTAAATTTGGGGGTAAAATTGGTATTTCACGTGTCCAAAAGGTCATTGGTGATAAAGTTTCTAGGAGCGGGTCATCCATAGATAAGTTTTTAGTTTTTAGGTCATTTCGTGCAATTTTCCCGGGAAAAGTGAAAGGTTGAGAGAGAAAGCAAAAGGTTCAGAAGGTTCAGAGAGAAAGCGGAAAGGTTGAGAGAGAAATCGAAAGGGTCAGAGAGAAAACGAAAGCGAAAAGGTTGAAAGGCAAAATGGGGAAGTTCAGAGAGAAAGCGGGAAATTTTGAGAGAGAAAGTGAAATGTTGTGAGAGAAAGCGAAAGCAGAAAAGCATTTCAACGGGTAGGAGGCGACTTTTAAAGAAAAAATGGAAAGGCACTTTTTGGGCTGTTTTAAGTTCGAGAGGGTAAAATTTGTATTTCACGTGTCCAAAAGGTCACTTATGATAAAGTTTTTGGGAGTGGGTCATCCATAGATAAGTTTTTAGTTTTTGGGTCATTTCGCACAATTTTCCATTTGTTTTAGATGTTGGTTTCATTTTGTCTTATTTATTTTTGTTCATCTTCTTCCTCTTCCATGGTTTTTCTTTATTGTTGTTTAAGAAAAAAAGGAAAATATGTGTAAAAAGAAGAGGTGAGATAAAAAAATGAAGTAAAAAAAATAAACACATCTTAGAAGAGAATAGGTTGGTAGAGAGCAAGCTTAGAGCAAGTTTAGGAGAAAATAAGTAGTTGGAGTTTTATTTTTATAAGGGAAATTATTTCGAATGGCAAAATCGTTGAAATATTTACCAAATAATGAAAAAATATTACTGTCTATAATGACAGAGATAGTAGTCTATTGCGATCTATCATGGTCTATCAATGATAGGCAGTAAAATTTTGTTATATTTGTAAATATTTTAGTTCATTTTGTTATATTTGAAAACAACCCAAAGAAAAAGAAATGAGTTTAAATAAATATGTTAAACTTTTTATTATTATTATTATGGAATATGTAAAGTTTGGGTGTTTTTCCATTCATTTTTTCTATTGTTATTTATTTGTTTATTTATTCACTATTCATTATTTATTATTATTATTATTATTATTATTATTATTTCTTTTCTTTTCTTTAGTTTATTTATTTTATATTCTTTATTTGACATTTTTCTTAGTTTTGAGGGAAATTATTTTAAATGTCAAAACTGCTGAAAACATTTACAACTAATAGTAAAATATATAGTTTATCTGCGATAAACCACGATAGATCGTGATAAACTACTATCTGTGTCTATCGTGATATAGATACTAGTTTATCGAGATCTATCGCGGTCTATCGCAGATAGACGGTAAAATTTTGCTATATTTGTAAATATTTTGGTTCATTTTTCTATAGTTGAAAAGAGTTCTAGTTTTATTTGTTTATTTTATCTTAAGTATTGCATTTAATCATTTTAACTTTCAAGCATTTTGTTTTGTTACTATTTTAATATATTTATGTTGTGTTATAACTAATTTATATTATCCTAATGTTCTTAATCTTTGTTTTTTTAAAAAAAAAAAAAAAAAAAAAAACTCCTAAGACGGATTCTAGAAATATTTGGGAGTCTAATTTTCTAGAATCTTAAGGTGAGGAAGCCGATTCTTTGAGAGTCTGACATTGATTTCCAATATATTTTATTAAACGTTTAATATATTTGTAAATATCATAGCTTATTTATTTATTGCTTAAGTGTATTATTAAATTGTATATTTTATCAATGTCTGTTCGACGAGATTTTCGAAGAAGATTTAATTCGTGGAACTTGAACTTCATATTTGTATTAATTTCAGTTTTGTGAGTACAATCTCTAATATATTTAATCCTTTGATTCATTCTCTCCAAAAGTAAACGCGTGCGGCTTGAATTCTTGAGATCTTCTATGAAGCTTTTCTCTCAAGGTCTTCAACTCCAGAGTCTTCAATCTTTGGGTCTTTGAATCTTTAGCTTCTTTGGAGCTTCAGGGAGCTTCAATCTTTAGAGCTTGTGAGCTTGGGAGCTTCGGTCTTTAGATCTTCAGCTTCGGCCTTCAATTCTTCAGAATCCGGACTTCCAGAGCTTCAATACTTTTCTTCACTCTCCAAAAGGATTCCCTCAATGAAGAGATAAAGCCTCTATTTATAGAGTTTCTATGGGCCTTTATGGGCTTGGGCCCAATTGCTTTTGGGCCTCAAAATTTGGGATTGGGCTTGGGCCCAATATCTTCTTTGGCCTAGAAAAAAAATTTACCATGGACTTGAATTAGGTTGAATTTTTTAACTTGAGCCATTTTAATTACTCGACCCAATCTGATTTATAAATTTCACGACGCATTTGGACTCATGATGACGTGGCGAAATTTGGTTGGCCGAAATTTTTCATTCAACAAATGCCCCCTTTTTGAGATTTTTGCGTGTGTATGGGTGGATGAATCTCGAAAAAGAAGATAAAGTTGGAATCAAAATGCAAATTATACGTTCTTGATTTTGACCCTACTGGATATGTCAATTTAATCAGACTTATGCGTTTAGTACATAAATTTGATTCAAACTCTGCGTATTTGACACGCACTTTTTGGCAACTTATCAAAACATGAATTTGTAGTCAAATGTTTTGATTTTTTAATGTTAACGACATCTCCAATTTAAACTCTAGCAAAATTCGTGCTCTACTTAATTCAAAACCGAATTTGGAGTTAAGTTGAATTTCTATCCAATATGTCTTAATTGAATGTGGGATAGAATTTGGGGTAAATTTGAATTTCAATCGATTTTAGTTAAAAGTTTAGAATATGCCTAAATTTTGACTTGAGATAGATTTGGTTTTGAATATAATTTGAGCTTAATCCGAATTTTGGTTTGGATTTGGATCTCACTCTAATTTATATCCACTCCCGATTTGGGGATATGATTCGAGATTAAATCAATTTTTTATTTATTTATTTAAGAAGTATTTAATTTTGGAATATAATTTGGATACAATCCAAAATTTTGTTTGGATTTGAATTGAGATTTGGGTTTAGGATTTGGAAGAATCTCAAACTAAAATTTGGATGCAATCTTAGTTTAAGAAGTTAAACTAAGATTTTTTTGTAGGGATTCCTAAATTTCTTTAGATACCAAAAGAAAATAGGAAAAATTCCCCAAATCGCGCGCAAAAAATCCCGTCGTCCTTTGGCTATATATATGTCCGGGCGTACAATGGTTTCTTCATTCCAAACTTGCTCCGCCTTTACTGCTACAACTGCTGTTCGGACATTGCCGGAATATCACGCGATTCTCCTGCTGTTATTGGAAGCCGTGGAACGCCGCCGGAGGTAGATCGTCGTCGCGTTGCTCTTCTATCGCCGGGTAATTCCTTCCACCGCAGTTTTCGTCGTCCACCACAAGGTTACCACTGGTTTGAGAGCTGGGCGCGAATGATACACGACGGGAAGGCGTGACAGCGTGAGTCAGGAAGCAGACTGAGCGAGAGAGTGAGAGTGAGCGAGAGTCTGAGAGTGCGAGACAGCGGGAGGGCGAGTGAGCGAGACTTGAGCGAGAGTGAGCGAGAGTCTGAGAGTTGAGTGAGATTCTGGGAGTTGAGCGAGAGTTTGAGAGTTGAGCGACCTTTTTTTTTTTTTTTTTTTTTTTCCGACCCTAATCATTTACTCCCCTCATTTGCAGGCTACCTTGCATCCCAACAGAACAACTCTCTCTCTTTTTTTTTTTTTGGGGCTCGCAAACCTTCTTGCCAACGATGGATTTGACGTATCCACTACGGACTCGATGTGTGATGACTTGATTTATTAATTTGTCATCCCTCTGTTGCTTTAGTGCATGAAGATTTGAGTGACTGACTCACCTCCTTTTTGCTGCCTTGGCAAGATTTAAATTGTCGATCCGTCGTCTCCCTACAGGTAGGGATGACCCTGGATATCTGAACTATTGAGTTAGGGATGAGACCGGGAAGATCTTAACGATTTGAAGGTCTTAGCGACTGAAAGTCGCCGTCACCCTACAGGTAGGGATGACCCTGGATATCTGAACTATTGAGTTAGGGATGAGACCGGGAAGATCTTAACGATTTGAAATCTTAGCGACTGAAACTCGCCGTCACCTTACAGGTAGGGATGACCCTGGGTCTCTGAACTATTGAGTTAAGGATGAGACCGGGAAGATCTTAGCGATTTGAATTTTAAGCCTAAGCGCGCTTAAGGGTGGTGATGTTGTGATGTCAATATCGGAGGCAGAAATTATTATTATTTTTATTATTATTATTATTATTATTATTTTGAATATGTTCACGTCTGCTTCACCATATAAAACTTTGATGCCTCTGTTTCTTTTGGATCGGGTAATTAAGATCTAACTTCTTATGGTGACGTTTTCCTTGCAGGACAATGGTTTACTTTGCGGAGCATGTCTCGTCTGGAAAAACACAGCTCGTGATCCTTGTAGAGAGGCACCAGACTATACAGAGTGGACTTACCTTTACTGTGGAGGCTCCCCTAACTGGTTTCTTTTCAGATGTTTGGCTAGAGCTGGATGACGATATGACCCTCCCCGAGTTATCTGTTGAGGTGCCTTTTCATCAGGGGGAAAAGGTATGGATCCTAAGGTCGCCGATTCATGACACGGCCCCTTCCTCGGATCCATTGTTAACTCTCGGGCGGCGCATGCTGGAAGGCGAGACCCGCTGGAGCACCATTGTGAAAGTCCCAGGTGAATTCACTTTTACCGACTACTAG

mRNA sequence

ATGTTGCTGAAACGAATACTGGACGAAGATGAAAAAAGCGACAGCTGCTGTAACTCTCGGAGAAAAATAGAAGAAGAAGTTAGTGATACTTGCAGAACTCAATGGAATAATGGAAGAATGTGTGAGAGTGACCGTCCATTAGTACCCTTGCATTCAATTTTGTTGATACCAAAAGAAAATAGGAAAAATTCCCCAAATCGCGCGCAAAAAATCCCGTCGTCCTTTGGCTATATATATGTCCGGGCGTACAATGGTTTCTTCATTCCAAACTTGCTCCGCCTTTACTGCTACAACTGCTGTTCGGACATTGCCGGAATATCACGCGATTCTCCTGCTGTTATTGGAAGCCGTGGAACGCCGCCGGAGGTAGATCGTCGTCGCGTTGCTCTTCTATCGCCGGGTAATTCCTTCCACCGCAGTTTTCGTCGTCCACCACAAGGTTACCACTGGACAATGGTTTACTTTGCGGAGCATGTCTCGTCTGGAAAAACACAGCTCGTGATCCTTGTAGAGAGGCACCAGACTATACAGAGTGGACTTACCTTTACTGTGGAGGCTCCCCTAACTGGTTTCTTTTCAGATGTTTGGCTAGAGCTGGATGACGATATGACCCTCCCCGAGTTATCTGTTGAGGTGCCTTTTCATCAGGGGGAAAAGGTATGGATCCTAAGGTCGCCGATTCATGACACGGCCCCTTCCTCGGATCCATTGTTAACTCTCGGGCGGCGCATGCTGGAAGGCGAGACCCGCTGGAGCACCATTGTGAAAGTCCCAGGTGAATTCACTTTTACCGACTACTAG

Coding sequence (CDS)

ATGTTGCTGAAACGAATACTGGACGAAGATGAAAAAAGCGACAGCTGCTGTAACTCTCGGAGAAAAATAGAAGAAGAAGTTAGTGATACTTGCAGAACTCAATGGAATAATGGAAGAATGTGTGAGAGTGACCGTCCATTAGTACCCTTGCATTCAATTTTGTTGATACCAAAAGAAAATAGGAAAAATTCCCCAAATCGCGCGCAAAAAATCCCGTCGTCCTTTGGCTATATATATGTCCGGGCGTACAATGGTTTCTTCATTCCAAACTTGCTCCGCCTTTACTGCTACAACTGCTGTTCGGACATTGCCGGAATATCACGCGATTCTCCTGCTGTTATTGGAAGCCGTGGAACGCCGCCGGAGGTAGATCGTCGTCGCGTTGCTCTTCTATCGCCGGGTAATTCCTTCCACCGCAGTTTTCGTCGTCCACCACAAGGTTACCACTGGACAATGGTTTACTTTGCGGAGCATGTCTCGTCTGGAAAAACACAGCTCGTGATCCTTGTAGAGAGGCACCAGACTATACAGAGTGGACTTACCTTTACTGTGGAGGCTCCCCTAACTGGTTTCTTTTCAGATGTTTGGCTAGAGCTGGATGACGATATGACCCTCCCCGAGTTATCTGTTGAGGTGCCTTTTCATCAGGGGGAAAAGGTATGGATCCTAAGGTCGCCGATTCATGACACGGCCCCTTCCTCGGATCCATTGTTAACTCTCGGGCGGCGCATGCTGGAAGGCGAGACCCGCTGGAGCACCATTGTGAAAGTCCCAGGTGAATTCACTTTTACCGACTACTAG

Protein sequence

MLLKRILDEDEKSDSCCNSRRKIEEEVSDTCRTQWNNGRMCESDRPLVPLHSILLIPKENRKNSPNRAQKIPSSFGYIYVRAYNGFFIPNLLRLYCYNCCSDIAGISRDSPAVIGSRGTPPEVDRRRVALLSPGNSFHRSFRRPPQGYHWTMVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSVEVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTDY
Homology
[Close]
BLAST of Clc01G12610 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-27
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 152 MVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSVE 211
           MVYF E   SG   LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 212 VPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           VP  +G+  W+L+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 114

[Close]
BLAST of Clc01G12610 vs. NCBI nr
Match: KAA0053734.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-27
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 152 MVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSVE 211
           MVYF E   SG   LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 212 VPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           +P  +G+  WIL+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 114

[Close]
BLAST of Clc01G12610 vs. NCBI nr
Match: KAA0057574.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 7.0e-27
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 151 TMVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSV 210
           TMVYF E   SG   LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSV
Sbjct: 16  TMVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSV 75

Query: 211 EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           EVP  +G+  W+L+S IH+ A +S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 76  EVPLSEGKSAWVLQSSIHNEASNSGKALTLGQRLIEGQTRWGTVTKVPGEFCFTD 130

[Close]
BLAST of Clc01G12610 vs. NCBI nr
Match: KAA0048380.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 9.2e-27
Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 151 TMVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSV 210
           TMVYF E   S    LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSV
Sbjct: 59  TMVYFTERFLSEVRHLVILSDRNQPREDGLSLIVETPWAGAFADHWPRLDNNSVLPRLSV 118

Query: 211 EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           E+P  +G+  W+L+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 119 EIPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 173

[Close]
BLAST of Clc01G12610 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-26
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 152 MVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSVE 211
           MVYF E   SG   LVIL +R+Q  + GL+  +E P  G F+D W  LD++  LP LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 212 VPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           +P  +G+  WIL+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTD 114

[Close]
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-27
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 152 MVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSVE 211
           MVYF E   SG   LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 212 VPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           VP  +G+  W+L+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 114

[Close]
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match: A0A5A7UET3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001110 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.0e-27
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 152 MVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSVE 211
           MVYF E   SG   LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 212 VPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           +P  +G+  WIL+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 114

[Close]
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match: A0A5A7UR46 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00460 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-27
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 151 TMVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSV 210
           TMVYF E   SG   LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSV
Sbjct: 16  TMVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSV 75

Query: 211 EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           EVP  +G+  W+L+S IH+ A +S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 76  EVPLSEGKSAWVLQSSIHNEASNSGKALTLGQRLIEGQTRWGTVTKVPGEFCFTD 130

[Close]
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match: A0A5A7TZ08 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00990 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-27
Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 151 TMVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSV 210
           TMVYF E   S    LVIL +R+Q  + GL+  VE P  G F+D W  LD++  LP LSV
Sbjct: 59  TMVYFTERFLSEVRHLVILSDRNQPREDGLSLIVETPWAGAFADHWPRLDNNSVLPRLSV 118

Query: 211 EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           E+P  +G+  W+L+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 119 EIPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 173

[Close]
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match: A0A5A7TFC8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00910 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.6e-27
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 151 TMVYFAEHVSSGKTQLVILVERHQTIQSGLTFTVEAPLTGFFSDVWLELDDDMTLPELSV 210
           TMVYF E   SG   LVIL +R+Q  + GL+  VE    G F+D W  LD++  LP LSV
Sbjct: 16  TMVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSV 75

Query: 211 EVPFHQGEKVWILRSPIHDTAPSSDPLLTLGRRMLEGETRWSTIVKVPGEFTFTD 266
           EVP  +G+  W+L+S IH+ AP+S   LTLG+R++EG+TRW T+ KVPGEF FTD
Sbjct: 76  EVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTD 130

The following BLAST results are available for this feature:
BLAST of Clc01G12610 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047478.14.1e-2753.51hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa][more]
KAA0053734.14.1e-2753.51putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0057574.17.0e-2753.04putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0048380.19.2e-2752.17putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0050516.11.6e-2652.63hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa][more]
BLAST of Clc01G12610 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TX422.0e-2753.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UET32.0e-2753.51Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7UR463.4e-2753.04Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7TZ084.5e-2752.17Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7TFC87.6e-2753.04PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
BLAST of Clc01G12610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G12610.1Clc01G12610.1mRNA