Clc01G12210 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G12210
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein FAF-like, chloroplastic
LocationClcChr01: 21179193 .. 21180753 (+)
RNA-Seq ExpressionClc01G12210
SyntenyClc01G12210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACGGATTCATAATAACCACAAAATTTAGATATTGTTTCTAAAACCACTCAACAATATTGCACTCCAACCAACAGATCCCCAAAAGAAAGGAACTCGCTTTCTTTAAAGCAATTTCTTTTTTATCAATTCAAACCTCAAAACAATCCCATCTCATCTTCCTCTAATTCTCTTCATTGTCAACCATATAAATAAAACACAGTTTATCAACTCATTTCTCTCTCAATTTCTCTGCAAATACTGCAGAGACTTTTATCCAGCCATGGCTGCTGCCTGTGGAAGCCTACAACACATCTTTGAAAACCCATTACCAGAAAGTCCAACCCTTCTTGAAACTCTCTCATCATGGAACCAGATTATGCCTCTGAAGCCCACCGATCACTCGTCCTTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCATTCTTTCTCATCCCTGTCGTCTTTGACAGAATCGAATTCTCCATCTTCCAATGACCTGTGGAAAGAACCATCCTCAAATGGTGAACATGAATGTTCCAGCTTCCATAGAAAGAGCAATAGCTTCTCGTCGACCAACTCGGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGGGATGGATGGAGAGGAATGGCAGAGGGAGGATGAGGGAGAAAGGAGCTTAAATAAACAGATTCAGTATCCAAATTTGAAGCCTGGAATGATTTGCAGGACAAAAACAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGGAAGCCTTGGGTTGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTAAGAGTTCCCACCCATGAATTTCTACATGCTTCCAGAGAAAATGGACGCCTGAAACTGCATATTCTTGTATCAAATGAGCAGACCAGAGAGACCAAGGAAGAAGACAACGACGGCAACAACAAGAACAACCATGAAAATACTATTGGGAAATGCAAGGTTGAAACTAGACCATGATGAGAGGCCATCACTTTCTTAGATAGAATATTTCAAGCTTAGACTTTTCAACTTCCCTAAAATCTGAACCTTTGTTTTCCCTACCTGGTGGTTGATTGCCTTGTTCCCTAGGAATTATCTTGTGTCCAATTCGATTCACTCTAATTTCAGAAACATTTATGTTCTCTGTTTCATATTTTTTACTAAACAGCATCTGGGATTCTGTAGTAATACCAACTGAATTCCATGGGAGCGAAAAAACTTCACGAACACAATAATTAACAATGTTGATCATCAATTCTGAATTGATGATCCTAACCTCTCACAAAATTGGAAGAAGTTTATTTCTAAAGACCATTCTTAATATCTAAAACAAATAGAATATGGAAAACTCCACTATACAGCAAAATAGTCTCTGAAAAGCTGATAATGTTTTTAGAAAATGGCAACATCCCAGGCATTATATTTAGAAAGAGTCAACAAAGTTCAATGAAAGAAACTCAAAGAACATCAGATTTCTCATTTCCTAACCTGGACCATCTA

mRNA sequence

AAAACGGATTCATAATAACCACAAAATTTAGATATTGTTTCTAAAACCACTCAACAATATTGCACTCCAACCAACAGATCCCCAAAAGAAAGGAACTCGCTTTCTTTAAAGCAATTTCTTTTTTATCAATTCAAACCTCAAAACAATCCCATCTCATCTTCCTCTAATTCTCTTCATTGTCAACCATATAAATAAAACACAGTTTATCAACTCATTTCTCTCTCAATTTCTCTGCAAATACTGCAGAGACTTTTATCCAGCCATGGCTGCTGCCTGTGGAAGCCTACAACACATCTTTGAAAACCCATTACCAGAAAGTCCAACCCTTCTTGAAACTCTCTCATCATGGAACCAGATTATGCCTCTGAAGCCCACCGATCACTCGTCCTTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCATTCTTTCTCATCCCTGTCGTCTTTGACAGAATCGAATTCTCCATCTTCCAATGACCTGTGGAAAGAACCATCCTCAAATGGTGAACATGAATGTTCCAGCTTCCATAGAAAGAGCAATAGCTTCTCGTCGACCAACTCGGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGGGATGGATGGAGAGGAATGGCAGAGGGAGGATGAGGGAGAAAGGAGCTTAAATAAACAGATTCAGTATCCAAATTTGAAGCCTGGAATGATTTGCAGGACAAAAACAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGGAAGCCTTGGGTTGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTAAGAGTTCCCACCCATGAATTTCTACATGCTTCCAGAGAAAATGGACGCCTGAAACTGCATATTCTTGTATCAAATGAGCAGACCAGAGAGACCAAGGAAGAAGACAACGACGGCAACAACAAGAACAACCATGAAAATACTATTGGGAAATGCAAGGTTGAAACTAGACCATGATGAGAGGCCATCACTTTCTTAGATAGAATATTTCAAGCTTAGACTTTTCAACTTCCCTAAAATCTGAACCTTTGTTTTCCCTACCTGGTGGTTGATTGCCTTGTTCCCTAGGAATTATCTTGTGTCCAATTCGATTCACTCTAATTTCAGAAACATTTATGTTCTCTGTTTCATATTTTTTACTAAACAGCATCTGGGATTCTGTAGTAATACCAACTGAATTCCATGGGAGCGAAAAAACTTCACGAACACAATAATTAACAATGTTGATCATCAATTCTGAATTGATGATCCTAACCTCTCACAAAATTGGAAGAAGTTTATTTCTAAAGACCATTCTTAATATCTAAAACAAATAGAATATGGAAAACTCCACTATACAGCAAAATAGTCTCTGAAAAGCTGATAATGTTTTTAGAAAATGGCAACATCCCAGGCATTATATTTAGAAAGAGTCAACAAAGTTCAATGAAAGAAACTCAAAGAACATCAGATTTCTCATTTCCTAACCTGGACCATCTA

Coding sequence (CDS)

ATGGCTGCTGCCTGTGGAAGCCTACAACACATCTTTGAAAACCCATTACCAGAAAGTCCAACCCTTCTTGAAACTCTCTCATCATGGAACCAGATTATGCCTCTGAAGCCCACCGATCACTCGTCCTTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTTGTTCCTCATTCTTTCTCATCCCTGTCGTCTTTGACAGAATCGAATTCTCCATCTTCCAATGACCTGTGGAAAGAACCATCCTCAAATGGTGAACATGAATGTTCCAGCTTCCATAGAAAGAGCAATAGCTTCTCGTCGACCAACTCGGAAAGCCTGCAACTCTGCACAGAAGGGCTTGGGTATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGGGATGGATGGAGAGGAATGGCAGAGGGAGGATGAGGGAGAAAGGAGCTTAAATAAACAGATTCAGTATCCAAATTTGAAGCCTGGAATGATTTGCAGGACAAAAACAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGGAAGCCTTGGGTTGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTAAGAGTTCCCACCCATGAATTTCTACATGCTTCCAGAGAAAATGGACGCCTGAAACTGCATATTCTTGTATCAAATGAGCAGACCAGAGAGACCAAGGAAGAAGACAACGACGGCAACAACAAGAACAACCATGAAAATACTATTGGGAAATGCAAGGTTGAAACTAGACCATGA

Protein sequence

MAAACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFSSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGNNKNNHENTIGKCKVETRP
Homology
BLAST of Clc01G12210 vs. NCBI nr
Match: XP_038894576.1 (uncharacterized protein LOC120083094 [Benincasa hispida])

HSP 1 Score: 433.3 bits (1113), Expect = 1.4e-117
Identity = 226/259 (87.26%), Postives = 237/259 (91.51%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTEQSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTES-NSPSSNDLWKEPS-SNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES NSPS++DLWKEPS SNGE E SSFHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESLNSPSTDDLWKEPSFSNGERESSSFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLK GMD + WQREDE E +L KQIQ+P+LKPGMI RTK+AN EDFPPPISCMGK+
Sbjct: 122 DDVEDLKEGMDEKVWQREDEEENTLKKQIQHPSLKPGMINRTKSANREDFPPPISCMGKN 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV +EQTRE KEED D N
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPHEQTREAKEED-DNN 241

Query: 243 NKNNHENTIGKCK-VETRP 259
           N+ N ENTIGKCK  ET P
Sbjct: 242 NEKNCENTIGKCKEAETSP 259

BLAST of Clc01G12210 vs. NCBI nr
Match: XP_008461212.1 (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo] >KAA0035517.1 protein FAF-like [Cucumis melo var. makuwa] >TYK31014.1 protein FAF-like [Cucumis melo var. makuwa])

HSP 1 Score: 431.0 bits (1107), Expect = 7.1e-117
Identity = 222/258 (86.05%), Postives = 236/258 (91.47%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+PTLLE LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTESNSPSS--NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES++ +S  +DLWKEP SNGE E S+FHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EW +EDE ER+L KQIQYPNLKPGMI RTK+ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NHENCENTIGKCKVETRP 257

BLAST of Clc01G12210 vs. NCBI nr
Match: XP_004139585.1 (protein FAF-like, chloroplastic [Cucumis sativus] >XP_031739243.1 protein FAF-like, chloroplastic [Cucumis sativus] >KAE8652852.1 hypothetical protein Csa_022731 [Cucumis sativus] >KGN64947.1 hypothetical protein Csa_022859 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 2.3e-115
Identity = 224/258 (86.82%), Postives = 234/258 (90.70%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+ TL E LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTE-SNSPSS-NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTE SNSPS+ +D+WKEPSSNGE E SSFHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EWQ EDE ER+L KQI YPNLKPGMI RTK ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NNKNCENTIGKCKVETRP 256

BLAST of Clc01G12210 vs. NCBI nr
Match: KAG7012710.1 (hypothetical protein SDJN02_25463, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 7.7e-95
Identity = 192/253 (75.89%), Postives = 211/253 (83.40%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTD-HSSFTEIFGELHFKESFVPHSF 62
           AACGSLQHIFE PLPE+PTLL+TLSSW+QI+ + P++  SSFTEIFGELHFKESFVP   
Sbjct: 2   AACGSLQHIFEAPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-PL 61

Query: 63  SSLSSLTESNSPSSN------DL--WKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTE 122
           S   SLTESNSPS +      D+  WKEPSSNG  E SS H +SNSFSSTNSESLQLCTE
Sbjct: 62  SPQLSLTESNSPSPSPSPAAVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCTE 121

Query: 123 GLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPP 182
           GLGYESLDD EDLKGGMD EEWQRE+E E +L KQIQ P  KPGMI RTK+AN++DFPPP
Sbjct: 122 GLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPP 181

Query: 183 ISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETK 242
           ISCMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILV N+QTRE K
Sbjct: 182 ISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAK 241

Query: 243 EEDNDGNNKNNHE 247
           EED+D   +  HE
Sbjct: 242 EEDDDNKQQQQHE 251

BLAST of Clc01G12210 vs. NCBI nr
Match: KAG6573629.1 (hypothetical protein SDJN03_27516, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.8 bits (917), Expect = 7.7e-95
Identity = 190/251 (75.70%), Postives = 209/251 (83.27%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTD-HSSFTEIFGELHFKESFVPHSF 62
           AACGSLQHIFE PLPE+PTLL+TLSSW+QI+ + P++  SSFTEIFGELHFKESFVP   
Sbjct: 2   AACGSLQHIFEAPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-PL 61

Query: 63  SSLSSLTESNSPSSNDL------WKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGL 122
           S   SLTESNSPS +        WKEPSSNG  E SS H +SNSFSSTNSESLQLCTEGL
Sbjct: 62  SPQLSLTESNSPSPSPAAVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCTEGL 121

Query: 123 GYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPIS 182
           GYESLDD EDLKGGMD EEWQRE+E E +L KQIQ P  KPGMI RTK+AN++DFPPPIS
Sbjct: 122 GYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPIS 181

Query: 183 CMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEE 242
           CMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILV N+QTRE KEE
Sbjct: 182 CMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKEE 241

Query: 243 DNDGNNKNNHE 247
           D+D   +  H+
Sbjct: 242 DDDNKQQEQHD 249

BLAST of Clc01G12210 vs. ExPASy Swiss-Prot
Match: Q6NMR8 (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 51/187 (27.27%), Postives = 90/187 (48.13%), Query Frame = 0

Query: 61  FSSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 120
           +SSL SL+  +S S+     + +++ E E S + ++ +S  + + +SL LCTE LG ES 
Sbjct: 71  WSSLQSLSSGSSSST-----KTTTSSEKESSYYVQRPSSCRALSDQSLALCTENLGSESG 130

Query: 121 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 180
            DV D+   +   + Q ++ GE +   +         +  R ++ +  D PPP++ M   
Sbjct: 131 SDVTDI-DELFSLDVQTKNLGETTTETRT--------LKSRKRSVSPSDLPPPLTTM--R 190

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHE-FLHASRENGRLKLHILVSNEQTRETKEEDNDG 240
           G   +  + +R  GR ++     P       A R NGRL+L IL  + +  E +EE  + 
Sbjct: 191 GFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENEEETIEP 241

Query: 241 NNKNNHE 247
                +E
Sbjct: 251 EETEEYE 241

BLAST of Clc01G12210 vs. ExPASy TrEMBL
Match: A0A5A7T1P9 (Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002630 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.4e-117
Identity = 222/258 (86.05%), Postives = 236/258 (91.47%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+PTLLE LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTESNSPSS--NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES++ +S  +DLWKEP SNGE E S+FHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EW +EDE ER+L KQIQYPNLKPGMI RTK+ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NHENCENTIGKCKVETRP 257

BLAST of Clc01G12210 vs. ExPASy TrEMBL
Match: A0A1S3CEL7 (protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.4e-117
Identity = 222/258 (86.05%), Postives = 236/258 (91.47%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+PTLLE LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTESNSPSS--NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTES++ +S  +DLWKEP SNGE E S+FHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EW +EDE ER+L KQIQYPNLKPGMI RTK+ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NHENCENTIGKCKVETRP 257

BLAST of Clc01G12210 vs. ExPASy TrEMBL
Match: A0A0A0LVU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166760 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 224/258 (86.82%), Postives = 234/258 (90.70%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPHSFS 62
           AACGSLQHIFENPLPE+ TL E LSSWNQIMPLKPT+ SSFTEIFGELHFKESFVPHSFS
Sbjct: 2   AACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFS 61

Query: 63  SLSSLTE-SNSPSS-NDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 122
           SLSSLTE SNSPS+ +D+WKEPSSNGE E SSFHRKSNSFSSTNSESLQLCTEGLGYESL
Sbjct: 62  SLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESL 121

Query: 123 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 182
           DDVEDLKG MD +EWQ EDE ER+L KQI YPNLKPGMI RTK ANMEDFPPPISCMGKS
Sbjct: 122 DDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 181

Query: 183 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDNDGN 242
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILV NEQTRE ++E +D  
Sbjct: 182 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD-- 241

Query: 243 NKNNHENTIGKCKVETRP 259
           N  N ENTIGKCKVETRP
Sbjct: 242 NNKNCENTIGKCKVETRP 256

BLAST of Clc01G12210 vs. ExPASy TrEMBL
Match: A0A6J1CLI0 (protein FANTASTIC FOUR 3-like OS=Momordica charantia OX=3673 GN=LOC111012561 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 198/277 (71.48%), Postives = 216/277 (77.98%), Query Frame = 0

Query: 1   MAAACGSLQHIFENPLPE-SPTLLETLSSWNQIMPLKPTDHSSFTEIFGELHFKESFVPH 60
           MAAACGSLQHIFE PLPE +P+LLETLSSWNQI+P+KPT+ SSFTEIFGELHFKESFVP 
Sbjct: 1   MAAACGSLQHIFETPLPEKNPSLLETLSSWNQILPVKPTEQSSFTEIFGELHFKESFVPP 60

Query: 61  SFSSLSSLTESNSP----SSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGL 120
           S S     T+SN+     S+N  WKEP  NG  E SSFH +SNSFSSTNSESLQLCTEGL
Sbjct: 61  SPSLSPPFTDSNAAAAAVSANSPWKEPFLNG--ESSSFHGRSNSFSSTNSESLQLCTEGL 120

Query: 121 GYESLDDVEDLKGGMDGEEWQREDEGER-SLNK-QIQYPNLKPGMICRTKTANMEDFPPP 180
           GYESLDDVEDLKG M+ EEWQRE E E  +L K QIQY NLKPGMI R+++ANM DFPPP
Sbjct: 121 GYESLDDVEDLKGEMEEEEWQREVEEESVALKKQQIQYQNLKPGMIRRSRSANMADFPPP 180

Query: 181 ISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETK 240
           ISCMGKSG PWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHIL+ NEQT ETK
Sbjct: 181 ISCMGKSGMPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILLPNEQTIETK 240

Query: 241 ----------------EEDNDGNNKNNHENTIGKCKV 255
                           EE+ +   K   EN IGKCKV
Sbjct: 241 EEEEEEEEEEEEEEEEEEEEEDKKKQEKENGIGKCKV 275

BLAST of Clc01G12210 vs. ExPASy TrEMBL
Match: A0A6J1G0A0 (uncharacterized protein LOC111449517 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449517 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.4e-94
Identity = 188/249 (75.50%), Postives = 208/249 (83.53%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTD-HSSFTEIFGELHFKESFVPHSF 62
           AACGSLQHIFE PLPE+PTLL+TLSSW+QI+ + P++  SSFTEIFGELHFKESFVP   
Sbjct: 74  AACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-PL 133

Query: 63  SSLSSLTESNSPSSNDL----WKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGY 122
           S   SLTESNSPS   +    WKEP SNG  E SS H +SNSFSSTNSESLQLCTEGLGY
Sbjct: 134 SPQLSLTESNSPSPAAVGIIPWKEPLSNG--ESSSSHGRSNSFSSTNSESLQLCTEGLGY 193

Query: 123 ESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCM 182
           ESLDD EDLKGGMD EEWQRE+E E +L KQIQ P  KPGMI RTK+AN++DFPPPISCM
Sbjct: 194 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 253

Query: 183 GKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEEDN 242
           G SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILV N+QTR+ KEED+
Sbjct: 254 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 313

Query: 243 DGNNKNNHE 247
           D   +  H+
Sbjct: 314 DNKQQEQHD 319

BLAST of Clc01G12210 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-20
Identity = 84/246 (34.15%), Postives = 112/246 (45.53%), Query Frame = 0

Query: 3   AACGSLQHIFENPLPES--PTLLETLSS---WNQIMPLKPTDHSS-----FTEIFGELHF 62
           AA GS   IF+NP  ++   + L+TLSS   WN    L  T H       FTEIFGELHF
Sbjct: 2   AAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDETPPPFTEIFGELHF 61

Query: 63  KESFVPHSFSSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCT 122
           +ES    S SS    +  NS                                  SLQLCT
Sbjct: 62  RES----SHSSYEKTSAENS----------------------------------SLQLCT 121

Query: 123 EGLGYESLDDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPP 182
           EGLG ES   +ED K   DG+    E E +   N        +P      +    +++PP
Sbjct: 122 EGLGSESYYGLEDEKVNGDGDGDDDEIEVKGKDNGSNDEEEWEP------RRKERKEYPP 181

Query: 183 PISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRET 239
            ++ M         FK+YR  GR +L+EVR+P  EFL ASRE+GRL+L ++   +   E 
Sbjct: 182 AMTRM--------SFKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDDHDEE 195

BLAST of Clc01G12210 vs. TAIR 10
Match: AT5G19260.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 51/187 (27.27%), Postives = 90/187 (48.13%), Query Frame = 0

Query: 61  FSSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESL 120
           +SSL SL+  +S S+     + +++ E E S + ++ +S  + + +SL LCTE LG ES 
Sbjct: 71  WSSLQSLSSGSSSST-----KTTTSSEKESSYYVQRPSSCRALSDQSLALCTENLGSESG 130

Query: 121 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKS 180
            DV D+   +   + Q ++ GE +   +         +  R ++ +  D PPP++ M   
Sbjct: 131 SDVTDI-DELFSLDVQTKNLGETTTETRT--------LKSRKRSVSPSDLPPPLTTM--R 190

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHE-FLHASRENGRLKLHILVSNEQTRETKEEDNDG 240
           G   +  + +R  GR ++     P       A R NGRL+L IL  + +  E +EE  + 
Sbjct: 191 GFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENEEETIEP 241

Query: 241 NNKNNHE 247
                +E
Sbjct: 251 EETEEYE 241

BLAST of Clc01G12210 vs. TAIR 10
Match: AT1G22110.1 (structural constituent of ribosome )

HSP 1 Score: 45.8 bits (107), Expect = 6.0e-05
Identity = 50/179 (27.93%), Postives = 81/179 (45.25%), Query Frame = 0

Query: 62  SSLSSLTESNSPSSNDLWKEPSSNGEHECSSFHRKSNSFSSTNSESLQLCTEGLGYESLD 121
           +S SS + S+  SS+D   +  S    + S F   S+  S T+S S     + +G ES  
Sbjct: 4   ASSSSDSSSSMASSSD---QSLSINSDQTSPF-VTSSMLSRTSSSSSSAVGDYIGTESCF 63

Query: 122 DVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMEDFPPPISCMGKSG 181
           D+     G D      E      +  + +Y   +       + A   +FPPPI  + ++G
Sbjct: 64  DILSADEGNDVVSVASE-----PVKSRFRYGGRRREE-REARAAAAREFPPPIPLLAQTG 123

Query: 182 K-----PWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVSNEQTRETKEE 236
                 PWV  +     GR IL+E +V  HE+  A+R NGRL LH++  ++   +  +E
Sbjct: 124 NLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVFDLPQE 172

BLAST of Clc01G12210 vs. TAIR 10
Match: AT5G22090.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 43.5 bits (101), Expect = 3.0e-04
Identity = 48/192 (25.00%), Postives = 74/192 (38.54%), Query Frame = 0

Query: 69  ESNSPSSNDLWKEPSSNGEHECSS--------FHRKSNSFSSTNSESLQLCTEGLGYESL 128
           E   P  +D+W    S  +   SS         H      SS + +SL++CTE LG E+ 
Sbjct: 102 EEIEPGQSDVWSSILSEKKKTESSKDTVPPPYVHPLMKRASSLSEKSLEICTESLGSET- 161

Query: 129 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMED----------- 188
              +        E    E E     N  +     K   I  T+    ++           
Sbjct: 162 -GCDGFSSHASSETGDAEIEIHDETNLVVNVTETKVEEITETEIVVEQESSIIVPNHIIE 221

Query: 189 -----FPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHIL- 236
                FPPPI  +       +  K+ R  GR +L+ V +P+H    A R++GRL L    
Sbjct: 222 LPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTFAE 281

BLAST of Clc01G12210 vs. TAIR 10
Match: AT5G22090.2 (Protein of unknown function (DUF3049) )

HSP 1 Score: 43.5 bits (101), Expect = 3.0e-04
Identity = 48/192 (25.00%), Postives = 74/192 (38.54%), Query Frame = 0

Query: 69  ESNSPSSNDLWKEPSSNGEHECSS--------FHRKSNSFSSTNSESLQLCTEGLGYESL 128
           E   P  +D+W    S  +   SS         H      SS + +SL++CTE LG E+ 
Sbjct: 102 EEIEPGQSDVWSSILSEKKKTESSKDTVPPPYVHPLMKRASSLSEKSLEICTESLGSET- 161

Query: 129 DDVEDLKGGMDGEEWQREDEGERSLNKQIQYPNLKPGMICRTKTANMED----------- 188
              +        E    E E     N  +     K   I  T+    ++           
Sbjct: 162 -GCDGFSSHASSETGDAEIEIHDETNLVVNVTETKVEEITETEIVVEQESSIIVPNHIIE 221

Query: 189 -----FPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHIL- 236
                FPPPI  +       +  K+ R  GR +L+ V +P+H    A R++GRL L    
Sbjct: 222 LPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTFAE 281

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038894576.11.4e-11787.26uncharacterized protein LOC120083094 [Benincasa hispida][more]
XP_008461212.17.1e-11786.05PREDICTED: protein FAF-like, chloroplastic [Cucumis melo] >KAA0035517.1 protein ... [more]
XP_004139585.12.3e-11586.82protein FAF-like, chloroplastic [Cucumis sativus] >XP_031739243.1 protein FAF-li... [more]
KAG7012710.17.7e-9575.89hypothetical protein SDJN02_25463, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6573629.17.7e-9575.70hypothetical protein SDJN03_27516, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Q6NMR81.5e-0527.27Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7T1P93.4e-11786.05Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002... [more]
A0A1S3CEL73.4e-11786.05protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=3 SV=... [more]
A0A0A0LVU31.1e-11586.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166760 PE=3 SV=1[more]
A0A6J1CLI01.4e-9471.48protein FANTASTIC FOUR 3-like OS=Momordica charantia OX=3673 GN=LOC111012561 PE=... [more]
A0A6J1G0A02.4e-9475.50uncharacterized protein LOC111449517 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT5G22390.12.3e-2034.15Protein of unknown function (DUF3049) [more]
AT5G19260.11.1e-0627.27Protein of unknown function (DUF3049) [more]
AT1G22110.16.0e-0527.93structural constituent of ribosome [more]
AT5G22090.13.0e-0425.00Protein of unknown function (DUF3049) [more]
AT5G22090.23.0e-0425.00Protein of unknown function (DUF3049) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 170..221
e-value: 2.2E-20
score: 72.6
IPR021410The fantastic four familyPANTHERPTHR33155FANTASTIC FOUR-LIKE PROTEIN (DUF3049)coord: 11..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..141
NoneNo IPR availablePANTHERPTHR33155:SF9FANTASTIC FOUR-LIKE PROTEIN (DUF3049)coord: 11..242

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G12210.1Clc01G12210.1mRNA