Clc01G12140 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAGGGTTGGCATATGCTGGCTTCTTCACTTCACATGTCTTTCAGTTTGAGCACCAAAAGTTTGATAAATCTATTATTGCTTTCCATGGCTTTTCTTAAGCTTTTTATTACTCCCATTTTCTTGCTTATGGTTCTTGCACCAACTCAACTTGCACAATGCAACAGTTTGAAGGCAAAGATCTCTTGCCTTGACTGTCAATCCAACTATGACTTCTCAGGTCTTTGCAAAGCTTTGAATTTTTTTGTTATATTAACTTGTGAATTTCCTTCTTAATTTTCATGTTTCTTAAGGAAGAGAACTATAAATAGTATATTTGGCAATCATTTATCATTTGGCATGTCCATTAAAGTGTTTAATCATGACTTAAAAAAGTGTTTTTTTAAAGGGGAAAACAACGATTGGTAGTGTTTGGGTTAGAATTTTAATAAGTGGAAAAGTATTTTTTCACTTTTGAAGGGACATTTAATTTGAGTAAATTATTTTGAATGACAAAATTGTTGAAAATATTTATAAATAATAATAAAATATCACAATTTATCTGCGATAGATCGCGACAGATCACAATAAACTACTATTTATATCTATCATGACACGGATGGACACGGATAATAATTTATTGCGGTCTATCTCAGATAGACAATAAATTTTGCTATATTTGTAAATATTTTGGTTTATTTTTATATATTTGAAAACAACCCTTTAAATTTTAATATTTTGTTATATAGAGAAGTGGTTAATTGGTGAACTATCTAAAAGTTGGTATTTGATCCCTATATTTTCAAGTTTGTTCAATTTTAATCCAAGAATTTTTAATTTTTCAATACTTTTAATCCATGTATTTTCACTAAATCATAACTTTAGTCCCCAATGCTAACTTATTGTTGATTTTTTAAAAAGATATTTTAATATCTATTGACATTTTTATTATAAATTTTGAAAAGATATTCTGGATCAAAATTCAACTTCAAAATATGTTAATCAATTCTCAAAATATATAATTAAAGGATAAGGTTTTCTTAGAGGAAACATTTAATTAATTTTCTTTGGAACTTGCTTAATAAGTGCTTCGCTTAAAAACACTCTCTTATAAAAGAGGCATGTCAACCACACACTTATTAAAAAAATATATAAATAGGGGATAAAATTTTCTTAGAGGGAGCAGTTAACTAATTTTCTTTCAAATGTTCTATTATACAACAAGTGTTTAAGTTACAAACAAGAAATTTTCTAGTACTTCCTGTGGTTATACTAAAAATTTGTGTTCATAAATATTTATGAACCCTATATTAATATCGGTGAGTCTCATTCTATTTTTAAAAGCATATTGATGTGTGACCCACAATAACTAGAGGTAGCATAAAAATTTTCCATATTATCATAATATAAGATATTTTTCCATTAAAACACATAGTATTACGCACTTATGCACGCACACGTGCGTGAGAGACCAAGCTTATATTATGAAACATTTCATACAAAATGAATTTTTTTTCTCATTACATGATAACTAAATTCGTAAAAAGAAACTAGGAACAAAAAATATCGATTACTTATATTCATTCTCCCTTTTAGGAAACTTGATTATGGTGAAGTGTAAGAGTGTGAAAAACCTAACGATAGCAATTACCGAAGCCGATGGATCGTTTGAAACCTCACTTCCTTCCGACGTGGCCTCCATCGACTTCGAAGCAGCTTCTTCTTCTCCCAAGTGCATAGCCAAGCTTGTTGGGGGATCTCACCAGCTCTTTGCTTCAAGGAAAGATATGGCTTCTACTGTCATCAAGGAAACCAACTCCAACTTCTTCACAATTTCTAGTCCTCTCAAGTTCTCCACATGCAAACAAAACATAAAATGCAAAGCCATGAAAAAAGAGTTTGCTGCAGATTCAAAGACCATCGATTTGCCTTTGCCACCTGAGTGGGGCTTCCCACCCACAAGCTACTATCTCCCAGTGCTTCCCATTATAGGCATTCCTTGAGCATTAACTCTATGTTTGAGGAGCATATAATGCATGGCTAAGTGTTACAATAAATGTAGCGTGTCTGGGATTTGTATCTTCAAAGCTCATGGCCAAGATAAGGGCTTTAAGCAAGTTGGCTTAATATAGTTATTTTATGCTGCCTATTAATTCTCTATTGTATGGTTTAAATATGTAGGTAAGTTAAAATGGTAAATTGTAACTTTTAAGGGGTAGTTTCTTTTATGAAAATGAAGATGGTCAAAATCTTCAAATGCCTAAATATATTTGAAAATTATGTAGATGTGCAACGTTTTTAAATAACCATGTTCGTAATATACAAAAATTTATAAAAGATTCAAGGAATATTAGATAGTCA TATAGGGTTGGCATATGCTGGCTTCTTCACTTCACATGTCTTTCAGTTTGAGCACCAAAAGTTTGATAAATCTATTATTGCTTTCCATGGCTTTTCTTAAGCTTTTTATTACTCCCATTTTCTTGCTTATGGTTCTTGCACCAACTCAACTTGCACAATGCAACAGTTTGAAGGCAAAGATCTCTTGCCTTGACTGTCAATCCAACTATGACTTCTCAGGAAACTTGATTATGGTGAAGTGTAAGAGTGTGAAAAACCTAACGATAGCAATTACCGAAGCCGATGGATCGTTTGAAACCTCACTTCCTTCCGACGTGGCCTCCATCGACTTCGAAGCAGCTTCTTCTTCTCCCAAGTGCATAGCCAAGCTTGTTGGGGGATCTCACCAGCTCTTTGCTTCAAGGAAAGATATGGCTTCTACTGTCATCAAGGAAACCAACTCCAACTTCTTCACAATTTCTAGTCCTCTCAAGTTCTCCACATGCAAACAAAACATAAAATGCAAAGCCATGAAAAAAGAGTTTGCTGCAGATTCAAAGACCATCGATTTGCCTTTGCCACCTGAGTGGGGCTTCCCACCCACAAGCTACTATCTCCCAGTGCTTCCCATTATAGGCATTCCTTGAGCATTAACTCTATGTTTGAGGAGCATATAATGCATGGCTAAGTGTTACAATAAATGTAGCGTGTCTGGGATTTGTATCTTCAAAGCTCATGGCCAAGATAAGGGCTTTAAGCAAGTTGGCTTAATATAGTTATTTTATGCTGCCTATTAATTCTCTATTGTATGGTTTAAATATGTAGGTAAGTTAAAATGGTAAATTGTAACTTTTAAGGGGTAGTTTCTTTTATGAAAATGAAGATGGTCAAAATCTTCAAATGCCTAAATATATTTGAAAATTATGTAGATGTGCAACGTTTTTAAATAACCATGTTCGTAATATACAAAAATTTATAAAAGATTCAAGGAATATTAGATAGTCA ATGCTGGCTTCTTCACTTCACATGTCTTTCAGTTTGAGCACCAAAAGTTTGATAAATCTATTATTGCTTTCCATGGCTTTTCTTAAGCTTTTTATTACTCCCATTTTCTTGCTTATGGTTCTTGCACCAACTCAACTTGCACAATGCAACAGTTTGAAGGCAAAGATCTCTTGCCTTGACTGTCAATCCAACTATGACTTCTCAGGAAACTTGATTATGGTGAAGTGTAAGAGTGTGAAAAACCTAACGATAGCAATTACCGAAGCCGATGGATCGTTTGAAACCTCACTTCCTTCCGACGTGGCCTCCATCGACTTCGAAGCAGCTTCTTCTTCTCCCAAGTGCATAGCCAAGCTTGTTGGGGGATCTCACCAGCTCTTTGCTTCAAGGAAAGATATGGCTTCTACTGTCATCAAGGAAACCAACTCCAACTTCTTCACAATTTCTAGTCCTCTCAAGTTCTCCACATGCAAACAAAACATAAAATGCAAAGCCATGAAAAAAGAGTTTGCTGCAGATTCAAAGACCATCGATTTGCCTTTGCCACCTGAGTGGGGCTTCCCACCCACAAGCTACTATCTCCCAGTGCTTCCCATTATAGGCATTCCTTGA MLASSLHMSFSLSTKSLINLLLLSMAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTIAITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSNFFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP Homology
BLAST of Clc01G12140 vs. NCBI nr
Match: XP_038895206.1 (uncharacterized protein LOC120083500 [Benincasa hispida]) HSP 1 Score: 297.4 bits (760), Expect = 9.7e-77 Identity = 150/179 (83.80%), Postives = 163/179 (91.06%), Query Frame = 0
BLAST of Clc01G12140 vs. NCBI nr
Match: XP_008461260.1 (PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo]) HSP 1 Score: 282.3 bits (721), Expect = 3.2e-72 Identity = 148/181 (81.77%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of Clc01G12140 vs. NCBI nr
Match: XP_004139493.1 (uncharacterized protein LOC101207654 [Cucumis sativus] >KGN64941.1 hypothetical protein Csa_022696 [Cucumis sativus]) HSP 1 Score: 266.9 bits (681), Expect = 1.4e-67 Identity = 141/181 (77.90%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of Clc01G12140 vs. NCBI nr
Match: XP_023542373.1 (uncharacterized protein LOC111802294 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.7 bits (657), Expect = 8.5e-65 Identity = 135/179 (75.42%), Postives = 153/179 (85.47%), Query Frame = 0
BLAST of Clc01G12140 vs. NCBI nr
Match: XP_031737339.1 (uncharacterized protein LOC116402231 [Cucumis sativus] >KAE8652846.1 hypothetical protein Csa_022898 [Cucumis sativus]) HSP 1 Score: 256.1 bits (653), Expect = 2.5e-64 Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A1S3CDU1 (uncharacterized protein LOC103499896 OS=Cucumis melo OX=3656 GN=LOC103499896 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72 Identity = 148/181 (81.77%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A0A0LYA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165730 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 6.8e-68 Identity = 141/181 (77.90%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A6J1HU61 (uncharacterized protein LOC111466611 OS=Cucurbita maxima OX=3661 GN=LOC111466611 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.7e-63 Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0
BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A6J1G179 (uncharacterized protein LOC111449745 OS=Cucurbita moschata OX=3662 GN=LOC111449745 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.9e-62 Identity = 131/179 (73.18%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A6J1CMJ0 (uncharacterized protein LOC111012639 OS=Momordica charantia OX=3673 GN=LOC111012639 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 4.4e-59 Identity = 126/180 (70.00%), Postives = 145/180 (80.56%), Query Frame = 0
BLAST of Clc01G12140 vs. TAIR 10
Match: AT5G22430.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 102.1 bits (253), Expect = 5.5e-22 Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 0
BLAST of Clc01G12140 vs. TAIR 10
Match: AT2G27385.2 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20 Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = 0
BLAST of Clc01G12140 vs. TAIR 10
Match: AT2G27385.3 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20 Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = 0
BLAST of Clc01G12140 vs. TAIR 10
Match: AT2G27385.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 96.3 bits (238), Expect = 3.0e-20 Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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