Clc01G12140 (gene) Watermelon (cordophanus) v2

Overview
NameClc01G12140
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPollen Ole e 1 allergen and extensin family protein
LocationClcChr01: 20777250 .. 20779588 (-)
RNA-Seq ExpressionClc01G12140
SyntenyClc01G12140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAGGGTTGGCATATGCTGGCTTCTTCACTTCACATGTCTTTCAGTTTGAGCACCAAAAGTTTGATAAATCTATTATTGCTTTCCATGGCTTTTCTTAAGCTTTTTATTACTCCCATTTTCTTGCTTATGGTTCTTGCACCAACTCAACTTGCACAATGCAACAGTTTGAAGGCAAAGATCTCTTGCCTTGACTGTCAATCCAACTATGACTTCTCAGGTCTTTGCAAAGCTTTGAATTTTTTTGTTATATTAACTTGTGAATTTCCTTCTTAATTTTCATGTTTCTTAAGGAAGAGAACTATAAATAGTATATTTGGCAATCATTTATCATTTGGCATGTCCATTAAAGTGTTTAATCATGACTTAAAAAAGTGTTTTTTTAAAGGGGAAAACAACGATTGGTAGTGTTTGGGTTAGAATTTTAATAAGTGGAAAAGTATTTTTTCACTTTTGAAGGGACATTTAATTTGAGTAAATTATTTTGAATGACAAAATTGTTGAAAATATTTATAAATAATAATAAAATATCACAATTTATCTGCGATAGATCGCGACAGATCACAATAAACTACTATTTATATCTATCATGACACGGATGGACACGGATAATAATTTATTGCGGTCTATCTCAGATAGACAATAAATTTTGCTATATTTGTAAATATTTTGGTTTATTTTTATATATTTGAAAACAACCCTTTAAATTTTAATATTTTGTTATATAGAGAAGTGGTTAATTGGTGAACTATCTAAAAGTTGGTATTTGATCCCTATATTTTCAAGTTTGTTCAATTTTAATCCAAGAATTTTTAATTTTTCAATACTTTTAATCCATGTATTTTCACTAAATCATAACTTTAGTCCCCAATGCTAACTTATTGTTGATTTTTTAAAAAGATATTTTAATATCTATTGACATTTTTATTATAAATTTTGAAAAGATATTCTGGATCAAAATTCAACTTCAAAATATGTTAATCAATTCTCAAAATATATAATTAAAGGATAAGGTTTTCTTAGAGGAAACATTTAATTAATTTTCTTTGGAACTTGCTTAATAAGTGCTTCGCTTAAAAACACTCTCTTATAAAAGAGGCATGTCAACCACACACTTATTAAAAAAATATATAAATAGGGGATAAAATTTTCTTAGAGGGAGCAGTTAACTAATTTTCTTTCAAATGTTCTATTATACAACAAGTGTTTAAGTTACAAACAAGAAATTTTCTAGTACTTCCTGTGGTTATACTAAAAATTTGTGTTCATAAATATTTATGAACCCTATATTAATATCGGTGAGTCTCATTCTATTTTTAAAAGCATATTGATGTGTGACCCACAATAACTAGAGGTAGCATAAAAATTTTCCATATTATCATAATATAAGATATTTTTCCATTAAAACACATAGTATTACGCACTTATGCACGCACACGTGCGTGAGAGACCAAGCTTATATTATGAAACATTTCATACAAAATGAATTTTTTTTCTCATTACATGATAACTAAATTCGTAAAAAGAAACTAGGAACAAAAAATATCGATTACTTATATTCATTCTCCCTTTTAGGAAACTTGATTATGGTGAAGTGTAAGAGTGTGAAAAACCTAACGATAGCAATTACCGAAGCCGATGGATCGTTTGAAACCTCACTTCCTTCCGACGTGGCCTCCATCGACTTCGAAGCAGCTTCTTCTTCTCCCAAGTGCATAGCCAAGCTTGTTGGGGGATCTCACCAGCTCTTTGCTTCAAGGAAAGATATGGCTTCTACTGTCATCAAGGAAACCAACTCCAACTTCTTCACAATTTCTAGTCCTCTCAAGTTCTCCACATGCAAACAAAACATAAAATGCAAAGCCATGAAAAAAGAGTTTGCTGCAGATTCAAAGACCATCGATTTGCCTTTGCCACCTGAGTGGGGCTTCCCACCCACAAGCTACTATCTCCCAGTGCTTCCCATTATAGGCATTCCTTGAGCATTAACTCTATGTTTGAGGAGCATATAATGCATGGCTAAGTGTTACAATAAATGTAGCGTGTCTGGGATTTGTATCTTCAAAGCTCATGGCCAAGATAAGGGCTTTAAGCAAGTTGGCTTAATATAGTTATTTTATGCTGCCTATTAATTCTCTATTGTATGGTTTAAATATGTAGGTAAGTTAAAATGGTAAATTGTAACTTTTAAGGGGTAGTTTCTTTTATGAAAATGAAGATGGTCAAAATCTTCAAATGCCTAAATATATTTGAAAATTATGTAGATGTGCAACGTTTTTAAATAACCATGTTCGTAATATACAAAAATTTATAAAAGATTCAAGGAATATTAGATAGTCA

mRNA sequence

TATAGGGTTGGCATATGCTGGCTTCTTCACTTCACATGTCTTTCAGTTTGAGCACCAAAAGTTTGATAAATCTATTATTGCTTTCCATGGCTTTTCTTAAGCTTTTTATTACTCCCATTTTCTTGCTTATGGTTCTTGCACCAACTCAACTTGCACAATGCAACAGTTTGAAGGCAAAGATCTCTTGCCTTGACTGTCAATCCAACTATGACTTCTCAGGAAACTTGATTATGGTGAAGTGTAAGAGTGTGAAAAACCTAACGATAGCAATTACCGAAGCCGATGGATCGTTTGAAACCTCACTTCCTTCCGACGTGGCCTCCATCGACTTCGAAGCAGCTTCTTCTTCTCCCAAGTGCATAGCCAAGCTTGTTGGGGGATCTCACCAGCTCTTTGCTTCAAGGAAAGATATGGCTTCTACTGTCATCAAGGAAACCAACTCCAACTTCTTCACAATTTCTAGTCCTCTCAAGTTCTCCACATGCAAACAAAACATAAAATGCAAAGCCATGAAAAAAGAGTTTGCTGCAGATTCAAAGACCATCGATTTGCCTTTGCCACCTGAGTGGGGCTTCCCACCCACAAGCTACTATCTCCCAGTGCTTCCCATTATAGGCATTCCTTGAGCATTAACTCTATGTTTGAGGAGCATATAATGCATGGCTAAGTGTTACAATAAATGTAGCGTGTCTGGGATTTGTATCTTCAAAGCTCATGGCCAAGATAAGGGCTTTAAGCAAGTTGGCTTAATATAGTTATTTTATGCTGCCTATTAATTCTCTATTGTATGGTTTAAATATGTAGGTAAGTTAAAATGGTAAATTGTAACTTTTAAGGGGTAGTTTCTTTTATGAAAATGAAGATGGTCAAAATCTTCAAATGCCTAAATATATTTGAAAATTATGTAGATGTGCAACGTTTTTAAATAACCATGTTCGTAATATACAAAAATTTATAAAAGATTCAAGGAATATTAGATAGTCA

Coding sequence (CDS)

ATGCTGGCTTCTTCACTTCACATGTCTTTCAGTTTGAGCACCAAAAGTTTGATAAATCTATTATTGCTTTCCATGGCTTTTCTTAAGCTTTTTATTACTCCCATTTTCTTGCTTATGGTTCTTGCACCAACTCAACTTGCACAATGCAACAGTTTGAAGGCAAAGATCTCTTGCCTTGACTGTCAATCCAACTATGACTTCTCAGGAAACTTGATTATGGTGAAGTGTAAGAGTGTGAAAAACCTAACGATAGCAATTACCGAAGCCGATGGATCGTTTGAAACCTCACTTCCTTCCGACGTGGCCTCCATCGACTTCGAAGCAGCTTCTTCTTCTCCCAAGTGCATAGCCAAGCTTGTTGGGGGATCTCACCAGCTCTTTGCTTCAAGGAAAGATATGGCTTCTACTGTCATCAAGGAAACCAACTCCAACTTCTTCACAATTTCTAGTCCTCTCAAGTTCTCCACATGCAAACAAAACATAAAATGCAAAGCCATGAAAAAAGAGTTTGCTGCAGATTCAAAGACCATCGATTTGCCTTTGCCACCTGAGTGGGGCTTCCCACCCACAAGCTACTATCTCCCAGTGCTTCCCATTATAGGCATTCCTTGA

Protein sequence

MLASSLHMSFSLSTKSLINLLLLSMAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTIAITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSNFFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP
Homology
BLAST of Clc01G12140 vs. NCBI nr
Match: XP_038895206.1 (uncharacterized protein LOC120083500 [Benincasa hispida])

HSP 1 Score: 297.4 bits (760), Expect = 9.7e-77
Identity = 150/179 (83.80%), Postives = 163/179 (91.06%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA L LFI PIFLL+VLAPT LAQ N+LKAKISCLDCQSNYD SGNLIMV C+ VKNLT+
Sbjct: 1   MASLNLFIIPIFLLLVLAPTHLAQSNTLKAKISCLDCQSNYDLSGNLIMVMCERVKNLTM 60

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
           AIT+ADGSFET LPSDVAS+DFEAA SSPKCIAKLVGG+HQLFASRKDMAST+IK+TN  
Sbjct: 61  AITKADGSFETPLPSDVASVDFEAAGSSPKCIAKLVGGAHQLFASRKDMASTIIKKTNFK 120

Query: 145 FFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
           FFTI++PLKFSTCK+N KCKAMKK+F  DSKTIDLPLPPEWGFPPTSYY PVLPIIGIP
Sbjct: 121 FFTIATPLKFSTCKENKKCKAMKKDFIEDSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 179

BLAST of Clc01G12140 vs. NCBI nr
Match: XP_008461260.1 (PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-72
Identity = 148/181 (81.77%), Postives = 161/181 (88.95%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA LKLFI PIFL MVLA TQLAQCN+LKAKISCLDCQSNYDFSGNLIMVKC+ VKNLTI
Sbjct: 4   MASLKLFIFPIFLFMVLASTQLAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERVKNLTI 63

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
           AIT+ADGSFET LPSD+AS+D EAA   PKCIAKLVGGSHQLFASRK++ ST+IKETNS 
Sbjct: 64  AITKADGSFETPLPSDMASVDSEAAPPPPKCIAKLVGGSHQLFASRKELVSTIIKETNSK 123

Query: 145 FFTISSPLKFSTCKQ-NIKCKAMKKEFAADSKTIDLP-LPPEWGFPPTSYYLPVLPIIGI 204
           FFTI++ L+FSTCK+ N KCKA+KKE   DSKT DLP LPPEWGFPPTSYYLPVLPIIGI
Sbjct: 124 FFTIATALRFSTCKEINRKCKAIKKESIEDSKTFDLPNLPPEWGFPPTSYYLPVLPIIGI 183

BLAST of Clc01G12140 vs. NCBI nr
Match: XP_004139493.1 (uncharacterized protein LOC101207654 [Cucumis sativus] >KGN64941.1 hypothetical protein Csa_022696 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-67
Identity = 141/181 (77.90%), Postives = 158/181 (87.29%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVL-APTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLT 84
           MA LKLFI+P F+ +VL A TQ AQCN+LKAKISCLDCQSNYDFSGNLIMVKC+  KNLT
Sbjct: 1   MASLKLFISPFFMFIVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLT 60

Query: 85  IAITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNS 144
           IAIT+ADGSFETSLPS++AS   EAA SSPKCIAKL+GGSHQLFASRK+M ST+IKETNS
Sbjct: 61  IAITKADGSFETSLPSNMAS---EAAPSSPKCIAKLLGGSHQLFASRKEMVSTIIKETNS 120

Query: 145 NFFTISSPLKFSTCKQ-NIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGI 204
            FFTI++ LKFSTCK+ +  CKA+KKE   DSKT D PLPPEWGFPPTSYY+PVLPIIGI
Sbjct: 121 KFFTIATALKFSTCKEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGI 178

BLAST of Clc01G12140 vs. NCBI nr
Match: XP_023542373.1 (uncharacterized protein LOC111802294 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 8.5e-65
Identity = 135/179 (75.42%), Postives = 153/179 (85.47%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA LKLFI    LLMVLA TQLAQCN+LKA ISCLDCQSNYDFSGN+I+V CK+VKNL++
Sbjct: 1   MASLKLFIIAFLLLMVLARTQLAQCNTLKANISCLDCQSNYDFSGNMIVVNCKNVKNLSV 60

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
           AITEA+GSF+T+LPSD+AS D EAA S+  CIAKL GG HQL+ASRK M+STVIK TNSN
Sbjct: 61  AITEANGSFKTTLPSDMASDDSEAAPSN--CIAKLTGGPHQLYASRKGMSSTVIKRTNSN 120

Query: 145 FFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
           FFT+++ L FSTCK N KC ++ K F ADSKTIDLPLPPEWGFPPTSYY PVLPIIGIP
Sbjct: 121 FFTLANALTFSTCKHNTKCLSI-KNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

BLAST of Clc01G12140 vs. NCBI nr
Match: XP_031737339.1 (uncharacterized protein LOC116402231 [Cucumis sativus] >KAE8652846.1 hypothetical protein Csa_022898 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 2.5e-64
Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = 0

Query: 38  LMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTIAITEADGSFETSL 97
           ++++A TQ AQCN+LKAKISCLDCQSNYDFSGNLIMVKC+  KNLTIAIT+ADGSFETSL
Sbjct: 3   IVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLTIAITKADGSFETSL 62

Query: 98  PSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSNFFTISSPLKFSTC 157
           PS++AS   EAA SSPKCIAKL+GGSHQLFASRK+M ST+IKETNS FFTI++ LKFSTC
Sbjct: 63  PSNMAS---EAAPSSPKCIAKLLGGSHQLFASRKEMVSTIIKETNSKFFTIATALKFSTC 122

Query: 158 KQ-NIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
           K+ +  CKA+KKE   DSKT D PLPPEWGFPPTSYY+PVLPIIGIP
Sbjct: 123 KEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGIP 166

BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A1S3CDU1 (uncharacterized protein LOC103499896 OS=Cucumis melo OX=3656 GN=LOC103499896 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.6e-72
Identity = 148/181 (81.77%), Postives = 161/181 (88.95%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA LKLFI PIFL MVLA TQLAQCN+LKAKISCLDCQSNYDFSGNLIMVKC+ VKNLTI
Sbjct: 4   MASLKLFIFPIFLFMVLASTQLAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERVKNLTI 63

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
           AIT+ADGSFET LPSD+AS+D EAA   PKCIAKLVGGSHQLFASRK++ ST+IKETNS 
Sbjct: 64  AITKADGSFETPLPSDMASVDSEAAPPPPKCIAKLVGGSHQLFASRKELVSTIIKETNSK 123

Query: 145 FFTISSPLKFSTCKQ-NIKCKAMKKEFAADSKTIDLP-LPPEWGFPPTSYYLPVLPIIGI 204
           FFTI++ L+FSTCK+ N KCKA+KKE   DSKT DLP LPPEWGFPPTSYYLPVLPIIGI
Sbjct: 124 FFTIATALRFSTCKEINRKCKAIKKESIEDSKTFDLPNLPPEWGFPPTSYYLPVLPIIGI 183

BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A0A0LYA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165730 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.8e-68
Identity = 141/181 (77.90%), Postives = 158/181 (87.29%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVL-APTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLT 84
           MA LKLFI+P F+ +VL A TQ AQCN+LKAKISCLDCQSNYDFSGNLIMVKC+  KNLT
Sbjct: 1   MASLKLFISPFFMFIVLIASTQRAQCNTLKAKISCLDCQSNYDFSGNLIMVKCERAKNLT 60

Query: 85  IAITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNS 144
           IAIT+ADGSFETSLPS++AS   EAA SSPKCIAKL+GGSHQLFASRK+M ST+IKETNS
Sbjct: 61  IAITKADGSFETSLPSNMAS---EAAPSSPKCIAKLLGGSHQLFASRKEMVSTIIKETNS 120

Query: 145 NFFTISSPLKFSTCKQ-NIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGI 204
            FFTI++ LKFSTCK+ +  CKA+KKE   DSKT D PLPPEWGFPPTSYY+PVLPIIGI
Sbjct: 121 KFFTIATALKFSTCKEISRNCKAIKKESVEDSKTFDFPLPPEWGFPPTSYYIPVLPIIGI 178

BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A6J1HU61 (uncharacterized protein LOC111466611 OS=Cucurbita maxima OX=3661 GN=LOC111466611 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.7e-63
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA LKLFI    LLM+LA TQLAQCN+LKA ISCLDCQSNYDFSGN+I+V CK+VKNL++
Sbjct: 1   MASLKLFIIAFLLLMILARTQLAQCNTLKANISCLDCQSNYDFSGNMIVVNCKNVKNLSV 60

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
           AITEA+GSF+T+LPSD  S D +AA S+  CIAKL+GG HQL+ASRK MAS VIK TNSN
Sbjct: 61  AITEANGSFKTTLPSDTFSDDSKAAPSN--CIAKLIGGPHQLYASRKGMASRVIKGTNSN 120

Query: 145 FFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
           FFT+++ L FSTCK N KC ++ K F ADSKTIDLPLPPEWGFPPTSYY PVLPIIGIP
Sbjct: 121 FFTLANALTFSTCKHNTKCLSI-KNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A6J1G179 (uncharacterized protein LOC111449745 OS=Cucurbita moschata OX=3662 GN=LOC111449745 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.9e-62
Identity = 131/179 (73.18%), Postives = 149/179 (83.24%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA LKLFI    L +VLA TQLAQCN+LKA ISCLDCQSNYDFSGN++ V CK+VKNL+I
Sbjct: 1   MASLKLFIIAFLLFIVLARTQLAQCNTLKASISCLDCQSNYDFSGNMVEVNCKNVKNLSI 60

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
           AITEA+GSF+T+LPS+ AS D E A S+  CIAKL+GG HQL+ASRK MAS VIK TNSN
Sbjct: 61  AITEANGSFKTTLPSNAASDDSETAPSN--CIAKLIGGPHQLYASRKGMASRVIKGTNSN 120

Query: 145 FFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
           FFT+++ L FSTCK N KC ++ K F ADSKTIDLPLPPEWGFPPTSYY PVLPIIGIP
Sbjct: 121 FFTLANALTFSTCKHNTKCLSI-KNFVADSKTIDLPLPPEWGFPPTSYYFPVLPIIGIP 176

BLAST of Clc01G12140 vs. ExPASy TrEMBL
Match: A0A6J1CMJ0 (uncharacterized protein LOC111012639 OS=Momordica charantia OX=3673 GN=LOC111012639 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.4e-59
Identity = 126/180 (70.00%), Postives = 145/180 (80.56%), Query Frame = 0

Query: 25  MAFLKLFIT-PIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLT 84
           MA LKL +T P  LLMVLA TQ AQC +L+AKISCLDC+SNYDFSGN I+VKC+ VKNL 
Sbjct: 1   MASLKLLLTLPFLLLMVLATTQAAQCYTLRAKISCLDCRSNYDFSGNKIVVKCEKVKNLA 60

Query: 85  IAITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNS 144
           +AIT  DGSFET+LPSD ++    + S    CIAKLVGG HQL+ASRKDMAS VIK TNS
Sbjct: 61  VAITRTDGSFETTLPSDASN----SQSPPSNCIAKLVGGPHQLYASRKDMASIVIKATNS 120

Query: 145 NFFTISSPLKFSTCKQNIKCKAMKKEFAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
            FFTI++ LKFSTCKQ+ KC+AMK +F ADSKT+DLPLP EWG  P+SYYLP LPIIGIP
Sbjct: 121 KFFTIATALKFSTCKQHNKCQAMKDQFIADSKTVDLPLPREWGLAPSSYYLPELPIIGIP 176

BLAST of Clc01G12140 vs. TAIR 10
Match: AT5G22430.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-22
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 0

Query: 35  IFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTIAITEADGSFE 94
           +F L V +  +L+  + +  KISCLDC  ++DFSG  +++KC   K    A+  ADGSF 
Sbjct: 12  LFALAVFSNLELSASSLVSGKISCLDCHRDFDFSGIKVLLKCDGEKKQITAVAAADGSFR 71

Query: 95  TSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIK-ETNSNFFTISSPLK 154
           + LP+            S  C+AKL+GG  QL+A + ++ S ++K + +S   T S+PL 
Sbjct: 72  SVLPT-------ADKKGSINCLAKLLGGPEQLYAHKHNLVSELVKSKHDSKVLTTSNPLA 131

Query: 155 FSTCKQNIKCKAMKKE----FAADSKTIDLPLPPEWGFPPTSYYLPVLPIIGIP 204
           FS     + C    ++       DSKTI+ P    +GFPP S++ P LPIIGIP
Sbjct: 132 FS-----LSCPKPSRDDIGSMIGDSKTINFPGAGGFGFPPASFF-PFLPIIGIP 172

BLAST of Clc01G12140 vs. TAIR 10
Match: AT2G27385.2 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20
Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA    F+        L+   +   + ++ K+SC DC ++YD+SG  + V C        
Sbjct: 1   MALRSHFLAVFLFSATLSSCLVVSASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFT 60

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
             T+  G F + LPS + S           C A+L G   QL+AS+ ++ S ++K    +
Sbjct: 61  VTTDKKGDFISELPSKIES----------NCEAELQGSVKQLYASKNNVKSKIVK-LGGD 120

Query: 145 FFTISSPLKFSTCKQNIKCKAMKKEFA--ADSKTIDLPLPPEWGFPPTSYYLPVLPIIGI 204
            + +SS L F         K+  + F   + SKT+DLP+PPEWG  PTSYY+P LPIIGI
Sbjct: 121 KYGLSSKLFF--------LKSCPRSFGSFSSSKTVDLPVPPEWGLAPTSYYVPFLPIIGI 162

BLAST of Clc01G12140 vs. TAIR 10
Match: AT2G27385.3 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20
Identity = 62/181 (34.25%), Postives = 92/181 (50.83%), Query Frame = 0

Query: 25  MAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKSVKNLTI 84
           MA    F+        L+   +   + ++ K+SC DC ++YD+SG  + V C        
Sbjct: 1   MALRSHFLAVFLFSATLSSCLVVSASLVEGKVSCFDCPNDYDYSGITVGVSCSHTNTRFT 60

Query: 85  AITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVIKETNSN 144
             T+  G F + LPS + S           C A+L G   QL+AS+ ++ S ++K    +
Sbjct: 61  VTTDKKGDFISELPSKIES----------NCEAELQGSVKQLYASKNNVKSKIVK-LGGD 120

Query: 145 FFTISSPLKFSTCKQNIKCKAMKKEFA--ADSKTIDLPLPPEWGFPPTSYYLPVLPIIGI 204
            + +SS L F         K+  + F   + SKT+DLP+PPEWG  PTSYY+P LPIIGI
Sbjct: 121 KYGLSSKLFF--------LKSCPRSFGSFSSSKTVDLPVPPEWGLAPTSYYVPFLPIIGI 162

BLAST of Clc01G12140 vs. TAIR 10
Match: AT2G27385.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-20
Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 0

Query: 19  NLLLLSMAFLKLFITPIFLLMVLAPTQLAQCNSLKAKISCLDCQSNYDFSGNLIMVKCKS 78
           +L    MA    F+        L+   +   + ++ K+SC DC ++YD+SG  + V C  
Sbjct: 6   DLCFFPMALRSHFLAVFLFSATLSSCLVVSASLVEGKVSCFDCPNDYDYSGITVGVSCSH 65

Query: 79  VKNLTIAITEADGSFETSLPSDVASIDFEAASSSPKCIAKLVGGSHQLFASRKDMASTVI 138
                   T+  G F + LPS + S           C A+L G   QL+AS+ ++ S ++
Sbjct: 66  TNTRFTVTTDKKGDFISELPSKIES----------NCEAELQGSVKQLYASKNNVKSKIV 125

Query: 139 KETNSNFFTISSPLKFSTCKQNIKCKAMKKEFA--ADSKTIDLPLPPEWGFPPTSYYLPV 198
           K    + + +SS L F         K+  + F   + SKT+DLP+PPEWG  PTSYY+P 
Sbjct: 126 K-LGGDKYGLSSKLFF--------LKSCPRSFGSFSSSKTVDLPVPPEWGLAPTSYYVPF 173

Query: 199 LPIIGIP 204
           LPIIGIP
Sbjct: 186 LPIIGIP 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038895206.19.7e-7783.80uncharacterized protein LOC120083500 [Benincasa hispida][more]
XP_008461260.13.2e-7281.77PREDICTED: uncharacterized protein LOC103499896 [Cucumis melo][more]
XP_004139493.11.4e-6777.90uncharacterized protein LOC101207654 [Cucumis sativus] >KGN64941.1 hypothetical ... [more]
XP_023542373.18.5e-6575.42uncharacterized protein LOC111802294 [Cucurbita pepo subsp. pepo][more]
XP_031737339.12.5e-6477.84uncharacterized protein LOC116402231 [Cucumis sativus] >KAE8652846.1 hypothetica... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CDU11.6e-7281.77uncharacterized protein LOC103499896 OS=Cucumis melo OX=3656 GN=LOC103499896 PE=... [more]
A0A0A0LYA16.8e-6877.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165730 PE=4 SV=1[more]
A0A6J1HU611.7e-6373.74uncharacterized protein LOC111466611 OS=Cucurbita maxima OX=3661 GN=LOC111466611... [more]
A0A6J1G1791.9e-6273.18uncharacterized protein LOC111449745 OS=Cucurbita moschata OX=3662 GN=LOC1114497... [more]
A0A6J1CMJ04.4e-5970.00uncharacterized protein LOC111012639 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
Match NameE-valueIdentityDescription
AT5G22430.15.5e-2237.36Pollen Ole e 1 allergen and extensin family protein [more]
AT2G27385.21.0e-2034.25Pollen Ole e 1 allergen and extensin family protein [more]
AT2G27385.31.0e-2034.25Pollen Ole e 1 allergen and extensin family protein [more]
AT2G27385.13.0e-2033.69Pollen Ole e 1 allergen and extensin family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc01G12140.1Clc01G12140.1mRNA