Clc01G11500 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G11500
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ras-related protein Rab-2A
Location	ClcChr01: 17777221 .. 17781967 (-)
RNA-Seq Expression	Clc01G11500
Synteny	Clc01G11500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGTACGCCCTTTGTATACATGTTTTTTAGTTTTCGATCTGATTCCTGAATTGGGTCGCTGTGATTATGGATTTATTTGTGCTTACTCTACGTGATTGATCTGTTTGTCTGATTTGATGATGTGAATGCTTTTCTGTTTGGTTTCTTTTTTCTTTTTTTTTCCATTTGGGAATTACTGCATTTGAGCTTTGAATTTGGATGCTGTTTGCTGTTTGTCGATTGATTGTGGGGATTGAAACTGAATTGTGTGCTCTATTCTCCAGGAGTTGGAAAATCATGTCTCCTTCTCCAGTTTACCGACAAGAGATTCCAGCCTGTTCATGACTTGACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAATAAACCAATCAAGTTGCAAATTTGGGATACGGTCAGTTATCTCTCTTCATTCTTTCTTGTAATTTTCTGGGGAATTTGTGGTTTCAAGTCTCTAGATATTTAACTGTGCCACTTGTCTATTGAATTGGTTTGTTGGTTAGGATTTTACCTTATCTTGGATCTTTTTAAAGGAAAATCACCTGCAATTGTGATCTGCTGCTATAAGCTTAAATCTTAGTTAAAATAAAAGGCGCAAACTATAACTAATAAAACCAGGAAACCTCCATTCATGCTTACTCTATAGAGTCCCTACTATTCTATTCGTCTTATATTGATGTTTCAAGCATTAAGGAAGGTTTCTTTTCAAGCTTCTTGGTGCTTGCTTCATCAAAAGATTCTTTCATCGAGTTTTTAGTTTGTGCAAAATTGAAGAGTTTGAGTTTGCTCTTTGTTGGTGGTGATTGCTTTTTGGGTTTCTCTGGTGTTTTTTGTAGTAGTCATGGTTTTTTCAATTGGTATTTGAAGGAGGCATGTTTGTAGATGTTGGCAAGTTTATCTATATTTGGTTGTATTTGTTGTTCATATCTTTTCTTCTTCTCTCCTTTCGGGAGATTGTATCTTTTAAACTTTTATTCTTTTTCACTATGTCAATGAGAAGTTGTTTCTTGCTTCAAAAAGAAGTTTATCATCATAACATGGCCTTGAATCTAAAAAAATTGTCTATAATTAATACAACGCTTATATGTGCTCTTAGCTCAATTGCTCTGCTTAAACTTAGAGCACACACATATAACACAGCCAGCATATCTATTCTACAAATAAATGATCGTTATTCGAAATTACTATCTGCTCTTTGTAACAATGATCGTTATTGAATCAACTTTGTGTATTGGTCATTTTTGTTACACATATATAACATAATAATGGTGGAGATGATTGTCTCTTGTACTCTTTCAATTTAGATTTGTTCTTTTCATATTAATTTCATCAAGATTTTCCAATTCTGAAGTTTCCCAAAAACATTACAGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGAGGAGCTGCTGGTGCATTGCTTGTCTACGACATCACAAGGTCTTGCTAACTCTTGGTTCTCTTCTAACTTAATACTACTTTTGAGTTTTGATGTGGGACTGATTTTTAGTTATTTGTATTTGATGCCTTATGCAACCGATGGGTTGTGACTGATAGTCTGTTTAACCAAGCTGGTCAAGGTTCTTAAGTTTTAGCTATTAGGGGTTGTTTTGGAGGCTAGAATGTAATCAGGATTACTGGAAATTTAAGGGATGTTGGAATGAGTGAGGAATTGAGAGTAGAATGGAAATGGGATTGTGAAGTGTGAAAATGGTGGGAAAGAGGGTTGAGTTAAAAACTATGGGAACATAATGAGTTTTGTATTACAAATTGGGGCTAAAACACTCAATCCAAACATGGGCTTTGGATTACATTACATTACAAGCTCATTCCATTATGAGTCCCCACACAACCCATTAGAGTTAGTCGGTTGGTTATGCTTTAGTTAGCTCTTGATTAGTATAAATATCCATTGTCTAGGTTGTATGCAATTCATTCCTGATTAAATAAAGTTCAATTCCTTGACACTGCGTCCCTATACCAATATTGGTATAAGAGCTGTTAGAAGATTTAGGTCTTTTGGGACCCAAGTTGTTGCCTTGTAGCCATTGGGTTGTGATCATTGCTATGTTTAACCTGGCTGGTTAAAGATGTTAGGTTTTAGCCACTAGATTTGGTTAGTTAGTTAGGCTTCAATTTGCTGCTTTATTGGTATAGGCTTGACACCCAAATGTTGTAAGGATAGGCGAGTTGTCCCGTGAGATTAGTCGAGGTGTGTGTAAGCTGGCCCGGACACTAACAAATATCAAAAAAAAAAAAAAAAAAAAAGTATTATATATTCATTGTTTTGCTCATATGCAATTCATGATTTAGTGGAGCTTCGGCTACACCAATTTTCTTGTGAATTGGGGGGCTTTTGAACTTCATCCGCCTAATTCATGTTGGGAGTGAGAATTTGTAAAGTCCCTAATAGATCATATTATAGTGGTTATATTAGCGTGTTTATATTATTGTAAATATATTAGTCATGTTTTCCTTTATGGTCTTTTTTACCTTATCATAGTAACCCCTTGTAAACTCGATGAATCAACTGCTTTCAATGAGAAAAGGTGAAAGAATACAAGGGCATACAACGTAAAGTTATTCGTTTATTTTTGTTTTGAGCAATTAAATAATTAATTAATATAACAATATATTAAATAATACTAATTTAATTCATGACAACATTAATTACTCTCTTACATTTAATTAACTAATTATTTAATTTTAGTTTACATACATAACACTGGTAAAACAAATACAAAAATTTAACTTCCGGTTCCAGATATTAATTATACTGCTTATTTGAACACATACATTAATTATCCTAGACATTTAAATTTCAGATATTGAATATTCATACCCATAAAACAATATTTGTGATCCAAATGAGTCGTCTGTGTTTCACAGACCTTAAGCCACCCTAATGTATTCATGTAGGAAAGGAAAGAAGGGGGACCAAGTGGTGTAAGTATGTGAGGACTGGCAGGCAGGTGTGTGATTTTGTGGTTAGTTATACGTTGTGTATGTTTGTCAGAGGGAGGTATTAAGGCTGCTTATGGCAGAGAGGAGGCTTTCTTTTTTGCATTTTGCTCAATTGTTAGCTCTTTGGGTATAGTGGAGAGGAGGGGAGCGTTGGCATTGCCAAAACAGTAAATATATAATTTGAGTTGTACCAATCCCTCAGTCACGAGGAAACCTCATACTTCATGAAAGTAAACAAGACTTCTCCAGAAAGGTTATAGGTTGGTGGGACTGACCATTATGTTACACGGTTGCTGTTTGTAGATGGTTTATTTTTGTCTTGTGTAGTTGTAGGTTTGTAGGAGAGGAATAACATAAGCATGATTGTAGTTGTTAAAATAATGGGGTCAGTCAGGTTTGACAGCAGTTCTTACCTGTTCTGATTGCATGATGTTTGGCGTGATTCTGCCTTCTAATTTAACTTGATAGACTGCATAAGCTGAAATGAGGCATTACCATCATGCTTTAAATTTCTTGAGTGAATGAAGATATCATAACTTAAGGTTATGTGGCTATCATACTTTTCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGTAATAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATACAATAGACATAAAAAAATTGCCTTTCACAAAATTTAAATTGGATGTTCATCTCTAAACTAAGAACATGACATAAAAGATATAATATTCATCTTTTTTGATATATTGTAAACAATCTTCTGTCCCACAATTTTCATGATGATCAATCATTTTTAACAGGCATTCATTAAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTTTTTGATGTATCTAATGAGGTATGCAGTATACTTTTACTTCTTGCTGCTAAATGTTTATAGAAGTATTTTAGTTTTACCCTTTGCATTTCCTCTTGCATTATGTATGAGAGTACTGGGCTATATGGATAATATTCATAGGATATTAGTAAGGTGTATTATGGGTAATTAACTAGTGGGCCTTGGTTATAAGAGGAGTTGGGCACCTTAGAGGGAGTGGAACATTGTGGTGAGAATTTTCATTGTGGGACTTTGGGAAAGAGATAACTCTCTCAAAATGTTGTGGGTATAACTTCTGCTGGTATTGCAATTTATTTCTATCTTGTGTCTTTGTATTTTCTTTGAGTTTTCTGTGTTGGATTGGATTTAATTTCATAGGTTGTTCTGAGATTTATCTTTGTAGGGGGTTTTGGTTCTACTTTTGACTGAGCTACCTGAAGTGGTGGCTTCACTGGTAGTCAAAAATTATTTAGCTGTTTGCATTGGATGGTGTTTGGCCAATGGGGTTTAGGCCCTGCCATAAATGACAGAATTTAGATTCTAGTTTCGATCGTTAGACTTTTTGTTATTATTTGTGCTAAACGATGGATGAATAGATGAGAATGATGTAATCGATGCTATGTTTCATCTTATATGTGCAGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGGGACGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAA

mRNA sequence

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTCCTTCTCCAGTTTACCGACAAGAGATTCCAGCCTGTTCATGACTTGACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAATAAACCAATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGAGGAGCTGCTGGTGCATTGCTTGTCTACGACATCACAAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGTAATAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATTAAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTTTTTGATGTATCTAATGAGGGGGTTTTGGTTCTACTTTTGACTGAGCTACCTGAAGTGGTGGCTTCACTGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGGGACGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAA

Coding sequence (CDS)

ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTCCTTCTCCAGTTTACCGACAAGAGATTCCAGCCTGTTCATGACTTGACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAATAAACCAATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGTCCTACTATAGAGGAGCTGCTGGTGCATTGCTTGTCTACGACATCACAAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGTAATAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATTAAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTTTTTGATGTATCTAATGAGGGGGTTTTGGTTCTACTTTTGACTGAGCTACCTGAAGTGGTGGCTTCACTGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGGGACGGTACTACAGCTCAATCTGGGGGTTGTTGCAGTTAA

Protein sequence

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS

Homology

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BLAST of Clc01G11500 vs. NCBI nr
Match: XP_038893942.1 (ras-related protein RABB1c isoform X2 [Benincasa hispida])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 211/228 (92.54%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDGTTAQSGGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 211

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BLAST of Clc01G11500 vs. NCBI nr
Match: XP_004139512.1 (ras-related protein RABB1c [Cucumis sativus] >XP_008464283.1 PREDICTED: ras-related protein RABB1c [Cucumis melo] >KGN64986.1 hypothetical protein Csa_022843 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 4.7e-112
Identity = 210/228 (92.11%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Clc01G11500 vs. NCBI nr
Match: XP_022142692.1 (ras-related protein RABB1c [Momordica charantia])

HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111
Identity = 208/228 (91.23%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of Clc01G11500 vs. NCBI nr
Match: KAG7019338.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 208/227 (91.63%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 SYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGTTAQSGGCC 210

[Close]

BLAST of Clc01G11500 vs. NCBI nr
Match: XP_022927533.1 (ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 208/227 (91.63%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 SYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 221 E-----------------SYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

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BLAST of Clc01G11500 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.8e-114
Identity = 207/227 (91.19%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 SYGIKVGYGGIPGPSGGRDG+T+Q GGCC
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Clc01G11500 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.5e-105
Identity = 195/228 (85.53%), Postives = 201/228 (88.16%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGY  IPG SGG   +++Q GGCCS
Sbjct: 181 E-----------------SYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of Clc01G11500 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-104
Identity = 195/228 (85.53%), Postives = 202/228 (88.60%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGY  +PG SGG  G+++Q GGCCS
Sbjct: 181 E-----------------SYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

[Close]

BLAST of Clc01G11500 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-100
Identity = 182/227 (80.18%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 S GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 181 E-----------------SSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Clc01G11500 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.5e-97
Identity = 184/230 (80.00%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYG-GIPGPSGGR--DGTTAQSGGCC 228
           E                 SYGIKVGYG G  GP   +  +G   +S  CC
Sbjct: 181 E-----------------SYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of Clc01G11500 vs. ExPASy TrEMBL
Match: A0A0A0LYF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112
Identity = 210/228 (92.11%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Clc01G11500 vs. ExPASy TrEMBL
Match: A0A1S3CLK8 (ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112
Identity = 210/228 (92.11%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDG TAQSGGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211

[Close]

BLAST of Clc01G11500 vs. ExPASy TrEMBL
Match: A0A6J1CNK8 (ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111
Identity = 208/228 (91.23%), Postives = 211/228 (92.54%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of Clc01G11500 vs. ExPASy TrEMBL
Match: A0A218XLU8 (ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111
Identity = 208/228 (91.23%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCCS 229
           E                 SYGIKVGYGGIPGPSGGRDG T+QSGGCCS
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGATSQSGGCCS 211

[Close]

BLAST of Clc01G11500 vs. ExPASy TrEMBL
Match: A0A6J1EL97 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111
Identity = 208/227 (91.63%), Postives = 210/227 (92.51%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 41  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 100

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 101 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 160

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSN
Sbjct: 161 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIQTAATIYKKIQDGVFDVSN 220

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 SYGIKVGYGGIPGPSGGRDGTTAQSGGCC
Sbjct: 221 E-----------------SYGIKVGYGGIPGPSGGRDGTTAQSGGCC 250

[Close]

BLAST of Clc01G11500 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 411.0 bits (1055), Expect = 6.3e-115
Identity = 207/227 (91.19%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 SYGIKVGYGGIPGPSGGRDG+T+Q GGCC
Sbjct: 181 E-----------------SYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Clc01G11500 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 365.9 bits (938), Expect = 2.3e-101
Identity = 182/227 (80.18%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC 228
           E                 S GIK+GYG   G +GGRDGT +Q GGCC
Sbjct: 181 E-----------------SSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Clc01G11500 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 328.6 bits (841), Expect = 4.1e-90
Identity = 168/228 (73.68%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITIDNKPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 EGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQS-GGCC 228
           E                         G  PGP GG+D +++Q   GCC
Sbjct: 181 EP------------------------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of Clc01G11500 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 273.1 bits (697), Expect = 2.0e-73
Identity = 137/181 (75.69%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 47  MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 166
           HAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGC 226
           I + IQDGVFDVSNE                 S GIK+GYG   G +GGRDGT +Q GGC
Sbjct: 121 ILQNIQDGVFDVSNE-----------------SSGIKIGYGRTQGAAGGRDGTISQGGGC 164

Query: 227 C 228
           C
Sbjct: 181 C 164

[Close]

BLAST of Clc01G11500 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 92/179 (51.40%), Postives = 121/179 (67.60%), Query Frame = 0


Query: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D+K +K QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL++ R H +AN+ IM +GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129

Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 182
           L H RAVSTE+ + FA+     FME SA  + NVE AF +  + IY+ +     D+ ++
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDD 188

The following BLAST results are available for this feature:

BLAST of Clc01G11500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893942.1	1.2e-112	92.54	ras-related protein RABB1c isoform X2 [Benincasa hispida]	[more]
XP_004139512.1	4.7e-112	92.11	ras-related protein RABB1c [Cucumis sativus] >XP_008464283.1 PREDICTED: ras-rela...	[more]
XP_022142692.1	3.0e-111	91.23	ras-related protein RABB1c [Momordica charantia]	[more]
KAG7019338.1	3.9e-111	91.63	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927533.1	3.9e-111	91.63	ras-related protein RABB1c-like [Cucurbita moschata] >KAG6583677.1 Ras-related p...	[more]

BLAST of Clc01G11500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	8.8e-114	91.19	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	1.5e-105	85.53	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	1.7e-104	85.53	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	3.3e-100	80.18	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P36863	7.5e-97	80.00	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of Clc01G11500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYF8	2.3e-112	92.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172570 PE=4 SV=1	[more]
A0A1S3CLK8	2.3e-112	92.11	ras-related protein RABB1c OS=Cucumis melo OX=3656 GN=LOC103502211 PE=4 SV=1	[more]
A0A6J1CNK8	1.5e-111	91.23	ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 S...	[more]
A0A218XLU8	1.9e-111	91.23	ras-related protein RABB1c OS=Punica granatum OX=22663 GN=LOC116208255 PE=4 SV=1	[more]
A0A6J1EL97	1.9e-111	91.63	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE...	[more]

BLAST of Clc01G11500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	6.3e-115	91.19	RAB GTPase homolog B1C	[more]
AT4G35860.1	2.3e-101	80.18	GTP-binding 2	[more]
AT4G17160.1	4.1e-90	73.68	RAB GTPase homolog B1A	[more]
AT4G35860.2	2.0e-73	75.69	GTP-binding 2	[more]
AT5G60860.1	1.2e-49	51.40	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.76 coord: 7..28 score: 51.86 coord: 145..167 score: 44.01 coord: 48..70 score: 53.53 coord: 110..123 score: 49.81
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..219 e-value: 2.0E-5 score: 27.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 4.1E-107 score: 371.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 7.3E-38 score: 141.8
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 195..228
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..182
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 195..228 coord: 1..182
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..203 score: 36.098251
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.684298
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 1.03437E-132 score: 368.674
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 6.2E-12 score: 33.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 1.1E-62 score: 210.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..187 score: 19.800241
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..181 e-value: 1.7E-71 score: 241.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..185
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 5.0E-33 score: 112.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G11500.2	Clc01G11500.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding