Clc01G09840 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G09840
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein PHLOEM PROTEIN 2-LIKE A9-like
Location	ClcChr01: 11385291 .. 11386773 (+)
RNA-Seq Expression	Clc01G09840
Synteny	Clc01G09840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCCGTTCTTATCCACTTTACTCCCTTTCTTTCTTCATCCTATAAATCCTTCATTTCAGTGGTTTCTCTCAAGTACTCAGCATTCTGAAATTGATTTTAAAGTTGTAATCACAAAATCAAGTTCTTGATCTTCTTGTGAGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGTTTGCTCTTTGCACATTCTTTTTTTTAAAAAAAAATTAAATTACTTTGCATCAAACTCAAGATTTTTTTTTTTTTTTAATTTTTTTTATTTTTTTAATCACTATTTCTTACATTTTTCTAACAGGATCTGATTTTTCATTTGATAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAATATCACCAACCCAAATGTGTAAGTGTCACTGATCTCTAATACGATTAAGAATATGAATATAAGATTAAAATTTTTGTCATTATTTGCTTATACATTTGAGTAGAATAGCTAGTAATTTAATATTGAATAGAGTATAAGTCGATCTTGTGTTTGAATTCTTATAATTTTTCATTTTTCTGTTATGGTACTAATTTTCAAGCCGACTAGTGAAAGAGAAAGTTTGAAATATGAATAAAAGAAACATGATAGTCTCTAGAGGAAATTCTTTTCATGACTTAGAGCAAAGAGTGGAGTTATGATGTTTGGAAAGTTAGGAAGTCCTAGGGTCCCCAATGTAAGGAACCTCAATAAAACATAAAATTGATGTTTTTTAGTTATAGGACCTACGAACTTGTTGGATCACTAACACAAGGAGGGGAGTTCATAACTCCAGTACTCTCTTAAGTCCTTTGGCCAAATGCTCTCCTAAAGAATTTATCATTCTACGAGTTCCCAGCTTGTCAAGCAAACGTAGTCAGGTTTGATGATAACTTTTATAAATTAGACGAAGTTGTGTGTAAGCTAGTCCAAATACCTTCAAAAGAAAAAGACAATCAAGAATATAACACAACATTATTGTATAATATGTGATAATTAGTTGTATAAATTTCTTTGCAGGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAGTTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA

mRNA sequence

ATGACGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAATATCACCAACCCAAATGTGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAGTTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA

Coding sequence (CDS)

ATGACGAGCTTTACAAATCCAATAATGACAACCACCTGCCCTCACAGAGAAGCAGATGAAACTGCCATTGAAAAGGATACCATCAAGGGAATCACCAAAATTTATCCAAGAGGATTTAACATCACATGGGGCAATGATGATCGCTATTGGAATATCACCAACCCAAATGTGCCAGGAAGTTTGTACATTGCAGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGTTCAACTGATAATGTACAAGTTGGTAATAAGTATAGAGTGGGTTTCAATATAACAATGAGACCAGATGCATTTGGGTGGGATGAGATTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGGAAGTTCATGTCCATGAAAGTTTCTCTTGGAGACATAAAACCAAATCTTAAACCTATCACCATCCCCAAGGAGCCCTTAGTAATCCCAGTTGATCCTTTAACACCCAAAGAGTTCAAGACCATCCATCTCGGTTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGAGGATTGCAGATCCATGATGCATTCGTTCAGAAGGTTGCCTAA

Protein sequence

MTSFTNPIMTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQVSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKVA

Homology

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BLAST of Clc01G09840 vs. NCBI nr
Match: XP_038894850.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 155/176 (88.07%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 10  TTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQV 69
           T  CPHREAD+TAIEKDT KGITKIYPRGFNITWGNDDRYWNITNPN PGSLY+AELKQV
Sbjct: 3   TICCPHREADKTAIEKDTNKGITKIYPRGFNITWGNDDRYWNITNPNEPGSLYMAELKQV 62

Query: 70  SWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDI 129
           SWLEVTCSTDNV  G+KYRVGFN+TMR DAFGWDEIDVYVMAKVG+KGKFMSMKVSLGD+
Sbjct: 63  SWLEVTCSTDNVDRGSKYRVGFNVTMRSDAFGWDEIDVYVMAKVGRKGKFMSMKVSLGDL 122

Query: 130 KPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKVA 186
           KPN  PITIPK+PLVI VDP TP E KTIHLGLYEVWSSKWKGGLQIHDAF+QKVA
Sbjct: 123 KPNKTPITIPKDPLVISVDPSTPIECKTIHLGLYEVWSSKWKGGLQIHDAFIQKVA 178

[Close]

BLAST of Clc01G09840 vs. NCBI nr
Match: XP_008459054.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043232.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa])

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 9   MTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQ 68
           MTTTCPHREADETA EK+ IKGITK+YPRGFNITWGNDDRYWNITNPNVPGSLY+AELKQ
Sbjct: 1   MTTTCPHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQ 60

Query: 69  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 128
           VSWLEVTCSTDNV+VG  YRVGFNITMRPDAFGWD IDVYVMAKVGKKGKF SMKVSLG+
Sbjct: 61  VSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGE 120

Query: 129 IKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           I PN  PITIPKEPL I V   TPKE +TIHLGLYEVWSSKWKGGLQIHDAF+ KV
Sbjct: 121 IGPNETPITIPKEPLEIFVAHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

[Close]

BLAST of Clc01G09840 vs. NCBI nr
Match: XP_004145459.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66903.1 hypothetical protein Csa_006885 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 2.1e-78
Identity = 143/178 (80.34%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 9   MTTTCPHREADE-TAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELK 68
           MTTTCPHREADE    EK+ IKGITK+YP GFNITWGNDDRYWNIT PNVPGSLY+AELK
Sbjct: 1   MTTTCPHREADEINGKEKNFIKGITKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELK 60

Query: 69  QVSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLG 128
           QVSWLEVTCSTDNV+VG  YRVGFNITM+PDAFGW+ IDVYVMAKVGKKGKF SMKVSL 
Sbjct: 61  QVSWLEVTCSTDNVEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLE 120

Query: 129 DIKPNLKPITIPKEPLVIPVDPLTPKEFK-TIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           +IKP+  PITIPK+PL I V+P+TP+E + TIHLGLYEVWSSKWKGG+QIHDAF+ +V
Sbjct: 121 EIKPDNIPITIPKKPLEIFVNPVTPEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of Clc01G09840 vs. NCBI nr
Match: XP_022142416.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 128/176 (72.73%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 9   MTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQ 68
           M+TT PHR ADETAI+KDT KG  +IYPRGFNITWGNDDRYW+I+N N P S  +AELKQ
Sbjct: 1   MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQ 60

Query: 69  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 128
           VSWLEVTCSTDNV++G  Y+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD
Sbjct: 61  VSWLEVTCSTDNVEIGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD 120

Query: 129 IKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
            +PN K +TIP+EPL I VD  TPK+ +TIHLGLYEVW+ KWKGGL+IHDAF+QK+
Sbjct: 121 KQPNEK-LTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI 174

[Close]

BLAST of Clc01G09840 vs. NCBI nr
Match: XP_022142415.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia])

HSP 1 Score: 265.8 bits (678), Expect = 2.8e-67
Identity = 125/174 (71.84%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 11  TTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQVS 70
           T  PHR AD+TAI KDT KG T+ YPRG NITWGNDDRYW+I+N N P S  +AELKQVS
Sbjct: 2   TIGPHRVADQTAIAKDT-KGNTRFYPRGLNITWGNDDRYWHISNSNTPKSSSVAELKQVS 61

Query: 71  WLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIK 130
           WLEVTCSTDNV+VG KY+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD K
Sbjct: 62  WLEVTCSTDNVEVGKKYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD-K 121

Query: 131 PNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           P  + + IP+EPL I VD  TPKE +TIHLGLYEVW+ KWKGGL+IHDAFVQ +
Sbjct: 122 PTNQSLKIPEEPLEITVDASTPKELRTIHLGLYEVWTQKWKGGLRIHDAFVQTI 173

[Close]

BLAST of Clc01G09840 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 15  HREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNI-TNPNVPGSLYIAELKQVSWLE 74
           H +AD + +E+D  +      P G N  WG D RYW I   P +P     AELK VSWLE
Sbjct: 8   HHKAD-SKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPRMP-----AELKMVSWLE 67

Query: 75  VTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGK-----FMSMKVSLGD 134
           VT S D ++ G  YR+GF I+ +PDA GWD+  V++ AK+GKKGK       S+  + G 
Sbjct: 68  VTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGI 127

Query: 135 IKPNLKPITIPKEP---LVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           +K   +P+ IP E      I V P    +   +  GLYEVW+ +WK GL IH+AFVQ+V
Sbjct: 128 LKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

[Close]

BLAST of Clc01G09840 vs. ExPASy TrEMBL
Match: A0A5A7TIU6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G001140 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 9   MTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQ 68
           MTTTCPHREADETA EK+ IKGITK+YPRGFNITWGNDDRYWNITNPNVPGSLY+AELKQ
Sbjct: 1   MTTTCPHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQ 60

Query: 69  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 128
           VSWLEVTCSTDNV+VG  YRVGFNITMRPDAFGWD IDVYVMAKVGKKGKF SMKVSLG+
Sbjct: 61  VSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGE 120

Query: 129 IKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           I PN  PITIPKEPL I V   TPKE +TIHLGLYEVWSSKWKGGLQIHDAF+ KV
Sbjct: 121 IGPNETPITIPKEPLEIFVAHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

[Close]

BLAST of Clc01G09840 vs. ExPASy TrEMBL
Match: A0A1S3C9E6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498278 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85
Identity = 153/176 (86.93%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 9   MTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQ 68
           MTTTCPHREADETA EK+ IKGITK+YPRGFNITWGNDDRYWNITNPNVPGSLY+AELKQ
Sbjct: 1   MTTTCPHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQ 60

Query: 69  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 128
           VSWLEVTCSTDNV+VG  YRVGFNITMRPDAFGWD IDVYVMAKVGKKGKF SMKVSLG+
Sbjct: 61  VSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGE 120

Query: 129 IKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           I PN  PITIPKEPL I V   TPKE +TIHLGLYEVWSSKWKGGLQIHDAF+ KV
Sbjct: 121 IGPNETPITIPKEPLEIFVAHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

[Close]

BLAST of Clc01G09840 vs. ExPASy TrEMBL
Match: A0A0A0LYR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G708660 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.0e-78
Identity = 143/178 (80.34%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 9   MTTTCPHREADE-TAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELK 68
           MTTTCPHREADE    EK+ IKGITK+YP GFNITWGNDDRYWNIT PNVPGSLY+AELK
Sbjct: 1   MTTTCPHREADEINGKEKNFIKGITKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELK 60

Query: 69  QVSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLG 128
           QVSWLEVTCSTDNV+VG  YRVGFNITM+PDAFGW+ IDVYVMAKVGKKGKF SMKVSL 
Sbjct: 61  QVSWLEVTCSTDNVEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLE 120

Query: 129 DIKPNLKPITIPKEPLVIPVDPLTPKEFK-TIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           +IKP+  PITIPK+PL I V+P+TP+E + TIHLGLYEVWSSKWKGG+QIHDAF+ +V
Sbjct: 121 EIKPDNIPITIPKKPLEIFVNPVTPEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of Clc01G09840 vs. ExPASy TrEMBL
Match: A0A6J1CM42 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012557 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.8e-71
Identity = 128/176 (72.73%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 9   MTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQ 68
           M+TT PHR ADETAI+KDT KG  +IYPRGFNITWGNDDRYW+I+N N P S  +AELKQ
Sbjct: 1   MSTTGPHRVADETAIDKDT-KGNARIYPRGFNITWGNDDRYWHISNSNTPKSSSVAELKQ 60

Query: 69  VSWLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGD 128
           VSWLEVTCSTDNV++G  Y+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD
Sbjct: 61  VSWLEVTCSTDNVEIGKTYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD 120

Query: 129 IKPNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
            +PN K +TIP+EPL I VD  TPK+ +TIHLGLYEVW+ KWKGGL+IHDAF+QK+
Sbjct: 121 KQPNEK-LTIPEEPLEITVDASTPKQLRTIHLGLYEVWTQKWKGGLKIHDAFIQKI 174

[Close]

BLAST of Clc01G09840 vs. ExPASy TrEMBL
Match: A0A6J1CKW1 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012556 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 125/174 (71.84%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 11  TTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQVS 70
           T  PHR AD+TAI KDT KG T+ YPRG NITWGNDDRYW+I+N N P S  +AELKQVS
Sbjct: 2   TIGPHRVADQTAIAKDT-KGNTRFYPRGLNITWGNDDRYWHISNSNTPKSSSVAELKQVS 61

Query: 71  WLEVTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGKFMSMKVSLGDIK 130
           WLEVTCSTDNV+VG KY+VGFN++M+PDAFGW+ I+VYVMAKVGK GKFM  KVSLGD K
Sbjct: 62  WLEVTCSTDNVEVGKKYKVGFNVSMKPDAFGWNGIEVYVMAKVGKSGKFMFKKVSLGD-K 121

Query: 131 PNLKPITIPKEPLVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           P  + + IP+EPL I VD  TPKE +TIHLGLYEVW+ KWKGGL+IHDAFVQ +
Sbjct: 122 PTNQSLKIPEEPLEITVDASTPKELRTIHLGLYEVWTQKWKGGLRIHDAFVQTI 173

[Close]

BLAST of Clc01G09840 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 )

HSP 1 Score: 144.4 bits (363), Expect = 8.9e-35
Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 15  HREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNI-TNPNVPGSLYIAELKQVSWLE 74
           H +AD + +E+D  +      P G N  WG D RYW I   P +P     AELK VSWLE
Sbjct: 8   HHKAD-SKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPRMP-----AELKMVSWLE 67

Query: 75  VTCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKGK-----FMSMKVSLGD 134
           VT S D ++ G  YR+GF I+ +PDA GWD+  V++ AK+GKKGK       S+  + G 
Sbjct: 68  VTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGI 127

Query: 135 IKPNLKPITIPKEP---LVIPVDPLTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           +K   +P+ IP E      I V P    +   +  GLYEVW+ +WK GL IH+AFVQ+V
Sbjct: 128 LKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

[Close]

BLAST of Clc01G09840 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 )

HSP 1 Score: 131.7 bits (330), Expect = 6.0e-31
Identity = 73/179 (40.78%), Postives = 101/179 (56.42%), Query Frame = 0


Query: 15  HREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPNVPGSLYIAELKQVSWLEV 74
           H EA E+ +E+D ++      P G N  WG D RYW I N +       AELK+VSWLEV
Sbjct: 11  HYEA-ESNMEQDIVRKAWVFKPSGLNFIWGGDSRYWVIPNEDRTP----AELKKVSWLEV 70

Query: 75  TCSTDNVQVGNKYRVGFNITMRPDAFGWDEIDVYVMAKVGKKG-----KFMSMKVSLGDI 134
           T S D ++ G  YR+GF I+   DA GWD+  V++ AK+GKKG     +  S+  +   +
Sbjct: 71  TGSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNFDKL 130

Query: 135 KPNLKPITIPKEP---LVIPVDP-LTPKEFKTIHLGLYEVWSSKWKGGLQIHDAFVQKV 185
           K    P+ IP E      I V P +   +   +  GLYEVW+ KWK GL I++AFV++V
Sbjct: 131 KGGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 184

[Close]

BLAST of Clc01G09840 vs. TAIR 10
Match: AT5G45080.1 (phloem protein 2-A6 )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 28/104 (26.92%), Postives = 51/104 (49.04%), Query Frame = 0


Query: 6   NPIMTTTCPHREADETAIEKDTIKGITKIYPRGFNITWGNDDRYWNITNPN-VPGS--LY 65
           NP   +  P R+ +  A ++ +    + +  R  +IT     + W  +  N  P S  + 
Sbjct: 211 NPQGGSMVPARKPEREASQEGSSVVPSMVPARDLDITHSEKPQKWTWSTINEAPNSAEIE 270

Query: 66  IAELKQVSWLEV--TCSTDNVQVGNKYRVGFNITMRPDAFGWDE 105
           IA L +V WL++  T +T+N+  G KY   F + +  +A GW++
Sbjct: 271 IATLNKVYWLKIVGTITTENLTPGAKYEAVFVVKLENNASGWEQ 314

The following BLAST results are available for this feature:

BLAST of Clc01G09840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894850.1	1.1e-87	88.07	protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]	[more]
XP_008459054.1	3.0e-85	86.93	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043232.1 pr...	[more]
XP_004145459.1	2.1e-78	80.34	protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66903.1 hypothetical prot...	[more]
XP_022142416.1	1.6e-70	72.73	protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]	[more]
XP_022142415.1	2.8e-67	71.84	protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]	[more]

BLAST of Clc01G09840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA16	1.3e-33	43.02	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 S...	[more]

BLAST of Clc01G09840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIU6	1.5e-85	86.93	Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C9E6	1.5e-85	86.93	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498278 PE...	[more]
A0A0A0LYR0	1.0e-78	80.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G708660 PE=4 SV=1	[more]
A0A6J1CM42	7.8e-71	72.73	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1CKW1	1.4e-67	71.84	protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Clc01G09840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31200.1	8.9e-35	43.02	phloem protein 2-A9	[more]
AT1G10155.1	6.0e-31	40.78	phloem protein 2-A10	[more]
AT5G45080.1	1.3e-04	26.92	phloem protein 2-A6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 34..180 e-value: 2.6E-20 score: 73.0
None	No IPR available	PANTHER	PTHR32278:SF2	PROTEIN PHLOEM PROTEIN 2-LIKE A9	coord: 21..181
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 21..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G09840.2	Clc01G09840.2	mRNA