Clc01G09180 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGATCTTCAGCTTTGGACAAGCGGACGCTACACGGATAGAACATTTTGGCCCTCGAGGTTTTCCTCGAAGAATGAGTCGTTCAAGTTTCTGTCTCTTCTTCTCCATTACTCATCTCTTTCGTCTATGAATATTCCTTCTTCCTAATAGACTTCCACAATTTCCATTTCTTCAGCTCCTTTGGTTGATCACTAATCAAGACTTCTTCACAGTTCCCTTCATTTTCGGAAATGGGTTTTTTCGATTCCATCCTCAATTGGCTCCGGAGGTATGATTTTGTCTTTCCCCCAAATTTTCCTGTTCTTGAATTGTGGGATTTTATTTTATTTATTGATCCTATTTTTTTGGCGGCTGAGCAAAAATTAGGAATAATTTTTACTTAGTTATTTGGGATTTAGTGTTACTAGTTTGTTGAAAGAAGGAATTGTCGGCTGAGTAGGGAAAGCTGCGTTTTAATTTTAAATTCGAACATGGGCCTCTTGTTTGACATTAATCTATAGTGAAGGTTCATTGGGAATGCAATATTTTGTGTATTCGTTTGGTCTTCTATTGAGTTTATTATGTTAATTTGAAGTTTGAATATTCAATCCTTCGAGTTGAGTGGTGCAGCTGTAAAAGATTTATAGATTTGTTAGTTAAAATTGCCCAACTGGGTCCCTTACGAATCTTATACTTATCACCATATTTTTGTGATGTCACTGAGATGGTTTACTCTGAAGTTCAGATTGCATTTGGGTTTGAGTTTTTGATGTAGTTCCAGTAAGTTAGCTTTTTTTATTATTTTTTAAGAAAAGACCTCAAAAGAAAGAAGAAAGTAGAATTGACTATCTAGTCATTCAAAATTTATTTTTATTTTTGCAAAAAAAAAAAAAAAAGAATAGAAGGATGTCAAACCCACAAAAATCCCACTAAAGATAGGGCTCCAACCACATAAAATCATGTCTATAGAGTAATTACAAAAAGTCTTCAAAATTGAAGCCCAAAGATAAACATGAAACTTCACCAAGGACCAAACATCACTAGAGTTTCTCTCCCCGAAGAACCCATAATAGAGCACACATCCCAACAAACAAATGACCCTTCTTGCTATAAGGCAGGTGGAGCAGGAGCTCTCAAATCAAGTCTCTAACGATAACCTGATGTAGTCCCTGTACATCATTATATGGGTTCACAGGCCAACCACTCACAACATGAAGAGTAACTGATATTATTACTAACACATCAGAACAAATAGTAACAGAACAAGTAATGGACTCTTTTAACATTTCTGTGGAGGTTGGGCAGGGTTGGATTTAGGCCCAGAAAATACTGGCTATACCTTGCTTCCTTGAAGCTGGCCACGATATTGGGAGTTTCTCTCCGTACCGCTTGAAATCATTCTTAGATACTCCCTAAAGTTATAATGTTAGAGACACAATCGAGTGTGTTGTTCTAGGCAGCTGTTCTCTAGCTAGGATCTTATTTTGTTTGCGGTGTTGCAGAACATCAACAATGGAATGCAATTGGAACAATTATTTTGGTTGTTTTCTGCCTTGGATCCCAACTTCTACATATTTGTGGCTTTTATACCTTAATTTTTTCAATGTGCATATTTTGTTTTCTTTTCCATACTTCTCACATTGCCCTAGCCACTGTTCTTGCATTTTAGTTTTGTAATGGAATCCCAAGTTGTAGGGAAGTCATTGTGTTAATCTAGCTTCCATGACCATGGCTTTATGGTTTTAACTTCTTCGTGAAAAAACAAAAGTGTTGTCGTCTCCAGTTTGATCTTTGGTTTGTTAGCCCTGTAGAATCACAAAACGCCTGTTGCTACGTTCTTGAATTAACCCTTTAGTTCATTAATAAACAAAAATTTCTGAGAAATGGAGAAACCATTGATGCGTGGTGTTTCAGTTTTTTTCATATGCCTAACCTTATTCAAGATCTGAAGGAAGCTGTTTCTTGCTACTACTTGAGATTTTTGGAAGTTCTTTTCAATTGAACTTTCTTGTGTGCTTGTTTTTCAGCCTCTTCTTCAAACAGGAAATGGAGCTCTCACTTGTAGGCCTCCAGAATGCTGGGAAGACGTCTCTTGTCAATTCAATTGCTGTAAGAAAATGCAAATTTTCACATCTCTTTGTTTGTGTATGCGAATGGCCTTCTTGTTCCCTGATGGTTTTCAAATTTTACAGACAGGGGGCTACAGTGAGGATATGATTCCAACTGTGAGTATGTTTTTTCTATCAAGTTCGCTGTTTACACTCATTCAACTGAATTTATCTTATGATCTTCACTTCATATTCTGATAACCAGGTCGGATTTAACATGCGGAAAGTTACTAAGGGCAATGTAACTATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTCCGTACAATGTGGGAGAGATATTGTCGTGGCGTAACTGCAATTGTGTAAATGTCCCAATTCTCTTACCCTTTCTCCTCATTCCATTTTAGCTATGTTTGTTACTTTAGCTTACTATATGGCTGATTATTTATTTATCTTTATTTAAACACCTGAACTCGTCAAAATTTAAACACAAAGCAAACAAATCACTGCATTTAGATATAATATCCTTTTATCCTAGTAGCATTATCTGCATTACCATCTGATAATTTGCATTCAAGAAAATCATTTTCTTTTCCAGTTTTGAGAGATTCCAAGATTCCCTGCCCTTTCCTGTATTTATTGAATTGATATCTTTCTCTTGAAGTCCAGTATCTCCCTCGTTAGAAGGATGAATTGTTCACATTCCATTTGATGGTTAGGAGAACACTTGAGCAAACAAAACCCAACAAATCTACATTTTTTGCTCGTCATAAAGTTCTCTGCAATTACACAGGCTGCAGGGGGCTGCTATTGGCTCTTGTTTTGAACCTTTTAAACATTAACTCAAAAATATGGAAATAATAAAAACTCTTCGAACTCTTTTGAGGGGCCTGGATTCACCCCCTTAAGATTCTCTCTAGTATGCTATCAGTATCTAACATCATTAGTTGGGAGCTTTGCAATGATAATGATAACATTCTAGAACCATTTGAATTGTAATTATTTGACATCCCTATTGTTAACATTGTTAACTAATTGGTGGGTGACTTGAAATACCTATTTGTTAAGTATTAACTGATCTGACTCCGACAAATGGCTAGAGTTGATAACTTGATAAAATAGGGTGCCATGGTCTATAAAAGGGATTTCGCTTCAGAAAGATGGATATAGTGTACGTGGGATTTTATTTATCTTGATATCTACCTCCTTAAGTTATTTGTCAGCCTTCTGGTATTAGATCAATTAACACCTCTCTCATAAGGATATCACATCATCATTAAAGTCCATCGTGTTGACGACAAAACAATATAGAATCACGATCAAAATTCAGTTACATTTCAAAATTTTTAAAGTCTAAAGACCAAATAGACAACCATCAAAGTTGAATAACCAAATCTGGATATTAACACTTCCATTTTGGTTTCTTTGTTATTTCTTTACCCTTTGTCCTGATATAATATGATGGGTGCAAGGTCAGGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAAGCACTTTCCAAGCAAGCACTGGTCGATTTGTTGTGAGTCCTGGATATTATATGGATGATATGGTTACAGTGTTCTGTCCATTCATATTGAAATGTACTTTTGATGATAATCTTTTTGGTTTGTTGCTGCAGAGAACTTGAAACAATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTTATTAAACACTCAAAAACAGCAGGATGATTGGTTTTATACCTTGTTTCTGTCTACCTAAAGAGTGATGAAGGTTCAAAGCAAGCTGTAGTGTGTAGAGGGTTTGAAGTTTATAAAGTTCAGCTATTCATGTTTGTTTGTTTTCAAATATATTGTAATTCAGCCATGCTGTCTATACTTCTTCCTTCATAAAGAAAAAAAAAAGTAAAAGAATTTATGCTGTAATTTTTTGCCATTATGGTTTTTGTCTCTAAACTATAATTGATATCCAATCATGTCAAAATCATCGAACGTATTAGTCATGGTGTGAAATACCATCGAACATCAGTTGCGTTATGAAATAATGGGATAGAAATTGATATTAAATGCGGGTCGTCAGTTGTGTAACTTTGAAAGGTGCTTCTGGTCATTAACAGCACTTCTTAAATTTGGTTGGAGTTGCGTTTGAAGTAGGTAGTTAATATGCATTTGGAATTCGAAAGTTT TGGATCTTCAGCTTTGGACAAGCGGACGCTACACGGATAGAACATTTTGGCCCTCGAGGTTTTCCTCGAAGAATGAGTCGTTCAAGTTTCTGTCTCTTCTTCTCCATTACTCATCTCTTTCGTCTATGAATATTCCTTCTTCCTAATAGACTTCCACAATTTCCATTTCTTCAGCTCCTTTGGTTGATCACTAATCAAGACTTCTTCACAGTTCCCTTCATTTTCGGAAATGGGTTTTTTCGATTCCATCCTCAATTGGCTCCGGAGCCTCTTCTTCAAACAGGAAATGGAGCTCTCACTTGTAGGCCTCCAGAATGCTGGGAAGACGTCTCTTGTCAATTCAATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGATTTAACATGCGGAAAGTTACTAAGGGCAATGTAACTATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTCCGTACAATGTGGGAGAGATATTGTCGTGGCGTAACTGCAATTGTGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAAGCACTTTCCAAGCAAGCACTGGTCGATTTGTTAGAACTTGAAACAATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTTATTAAACACTCAAAAACAGCAGGATGATTGGTTTTATACCTTGTTTCTGTCTACCTAAAGAGTGATGAAGGTTCAAAGCAAGCTGTAGTGTGTAGAGGGTTTGAAGTTTATAAAGTTCAGCTATTCATGTTTGTTTGTTTTCAAATATATTGTAATTCAGCCATGCTGTCTATACTTCTTCCTTCATAAAGAAAAAAAAAAGTAAAAGAATTTATGCTGTAATTTTTTGCCATTATGGTTTTTGTCTCTAAACTATAATTGATATCCAATCATGTCAAAATCATCGAACGTATTAGTCATGGTGTGAAATACCATCGAACATCAGTTGCGTTATGAAATAATGGGATAGAAATTGATATTAAATGCGGGTCGTCAGTTGTGTAACTTTGAAAGGTGCTTCTGGTCATTAACAGCACTTCTTAAATTTGGTTGGAGTTGCGTTTGAAGTAGGTAGTTAATATGCATTTGGAATTCGAAAGTTT ATGGGTTTTTTCGATTCCATCCTCAATTGGCTCCGGAGCCTCTTCTTCAAACAGGAAATGGAGCTCTCACTTGTAGGCCTCCAGAATGCTGGGAAGACGTCTCTTGTCAATTCAATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGATTTAACATGCGGAAAGTTACTAAGGGCAATGTAACTATTAAACTTTGGGACCTTGGAGGGCAAAGGAGATTCCGTACAATGTGGGAGAGATATTGTCGTGGCGTAACTGCAATTGTGTATGTAGTTGATTCTGCTGATAGAGACAGTGTTCCCATATCAAAAAGTGAACTCCATGAGCTCTTAACAAAGCCTTCTTTAAGTGGAATTCCTTTGCTTGTGCTGGGCAACAAAATTGACAAATCAGAAGCACTTTCCAAGCAAGCACTGGTCGATTTGTTAGAACTTGAAACAATTCGTGACAGGGAGGTGTGCTGCTACATGATCTCTTGCAAAGATTCGATAAACATCGATGTGGTGATCGATTGGCTTATTAAACACTCAAAAACAGCAGGATGA MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIVYVVDSADRDSVPISKSELHELLTKPSLSGIPLLVLGNKIDKSEALSKQALVDLLELETIRDREVCCYMISCKDSINIDVVIDWLIKHSKTAG Homology
BLAST of Clc01G09180 vs. NCBI nr
Match: XP_004140300.1 (ADP-ribosylation factor-like protein 8c [Cucumis sativus] >XP_038876072.1 ADP-ribosylation factor-like protein 8c [Benincasa hispida] >XP_038876073.1 ADP-ribosylation factor-like protein 8c [Benincasa hispida] >XP_038876074.1 ADP-ribosylation factor-like protein 8c [Benincasa hispida] >KGN51060.1 hypothetical protein Csa_008272 [Cucumis sativus]) HSP 1 Score: 367.9 bits (943), Expect = 5.3e-98 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. NCBI nr
Match: XP_008460532.1 (PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis melo]) HSP 1 Score: 367.5 bits (942), Expect = 6.9e-98 Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. NCBI nr
Match: XP_022961143.1 (ADP-ribosylation factor-like protein 8c [Cucurbita moschata] >XP_023512849.1 ADP-ribosylation factor-like protein 8c [Cucurbita pepo subsp. pepo] >KAG7032720.1 ADP-ribosylation factor-like protein 8c [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97 Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. NCBI nr
Match: KAG6602026.1 (ADP-ribosylation factor-like protein 8c, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97 Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. NCBI nr
Match: XP_022991181.1 (ADP-ribosylation factor-like protein 8c [Cucurbita maxima]) HSP 1 Score: 363.6 bits (932), Expect = 9.9e-97 Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy Swiss-Prot
Match: Q8W4C8 (ADP-ribosylation factor-like protein 8c OS=Arabidopsis thaliana OX=3702 GN=ARL8C PE=2 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 7.7e-92 Identity = 163/183 (89.07%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy Swiss-Prot
Match: Q93Y31 (ADP-ribosylation factor-like protein 8b OS=Arabidopsis thaliana OX=3702 GN=ARL8B PE=2 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.8e-80 Identity = 143/183 (78.14%), Postives = 168/183 (91.80%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy Swiss-Prot
Match: Q8VY57 (ADP-ribosylation factor-like protein 8a OS=Arabidopsis thaliana OX=3702 GN=ARL8A PE=2 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 6.7e-80 Identity = 143/182 (78.57%), Postives = 164/182 (90.11%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy Swiss-Prot
Match: Q5ZKQ8 (ADP-ribosylation factor-like protein 8A OS=Gallus gallus OX=9031 GN=ARL8A PE=2 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.5e-67 Identity = 115/182 (63.19%), Postives = 151/182 (82.97%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy Swiss-Prot
Match: Q8VEH3 (ADP-ribosylation factor-like protein 8A OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66 Identity = 114/182 (62.64%), Postives = 152/182 (83.52%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy TrEMBL
Match: A0A0A0KN64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G424890 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.6e-98 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy TrEMBL
Match: A0A1S3CDX0 (ADP-ribosylation factor-like protein 8A OS=Cucumis melo OX=3656 GN=LOC103499330 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98 Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy TrEMBL
Match: A0A6J1HB08 (ADP-ribosylation factor-like protein 8c OS=Cucurbita moschata OX=3662 GN=LOC111461740 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97 Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy TrEMBL
Match: A0A6J1JQ11 (ADP-ribosylation factor-like protein 8c OS=Cucurbita maxima OX=3661 GN=LOC111487854 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 4.8e-97 Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of Clc01G09180 vs. ExPASy TrEMBL
Match: A0A6J1CL74 (ADP-ribosylation factor-like protein 8c OS=Momordica charantia OX=3673 GN=LOC111011982 PE=3 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96 Identity = 177/184 (96.20%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of Clc01G09180 vs. TAIR 10
Match: AT5G37680.1 (ADP-ribosylation factor-like A1A ) HSP 1 Score: 337.8 bits (865), Expect = 5.4e-93 Identity = 163/183 (89.07%), Postives = 178/183 (97.27%), Query Frame = 0
BLAST of Clc01G09180 vs. TAIR 10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D ) HSP 1 Score: 300.1 bits (767), Expect = 1.3e-81 Identity = 143/183 (78.14%), Postives = 168/183 (91.80%), Query Frame = 0
BLAST of Clc01G09180 vs. TAIR 10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C ) HSP 1 Score: 298.1 bits (762), Expect = 4.8e-81 Identity = 143/182 (78.57%), Postives = 164/182 (90.11%), Query Frame = 0
BLAST of Clc01G09180 vs. TAIR 10
Match: AT3G49860.1 (ADP-ribosylation factor-like A1B ) HSP 1 Score: 235.7 bits (600), Expect = 2.9e-62 Identity = 114/165 (69.09%), Postives = 136/165 (82.42%), Query Frame = 0
BLAST of Clc01G09180 vs. TAIR 10
Match: AT2G24765.1 (ADP-ribosylation factor 3 ) HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25 Identity = 57/164 (34.76%), Postives = 88/164 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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