Clc01G01800 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAATTCCTATACCCCGCTGCCGGAAAGTTCATCGACGGCAATGGGGTGCTCCTCTTCGAAGCGAATCGAGGCCACTGTCGACGTATACCGTCCAGCGCCGGCGAGCTTTGCGGTTTTTGACATAAACGCCATAGAGGAGCCTTGGGTTAAAGTCATGGATGAGCAACCGCCACCACCCACGGCGGACCCGGTAAAGGAGGAGAAATCGGCGATTGTTCCGGTTCCGATTCTGGAGAAGCTCAGTAGTTTCGAGTCTGAAGCTCCTCATTCGTGGGATGAGGTGAGTAAAGCCCTTGAAGATCTCAAACCTGCTCTCCGCCCGGTTACAGAACCACCGCCGACGAAACCCCCTGCCATCGCCACCACCGCCGCCGTCGTTGCTAAACAGCCCCCACGTAAGAGCTCGAGTTTCCACACAGTGGCAGAGCTCGACGCCAAGTTGTCGCCCTCCGCCAAGCCGGCCGCCGAGTCTAAGCCTTCAGTGTTGAGAAAAGCGGCGTCTGTTAGACCCGGACCGGAAAAACCCGAGCCAAAAACCGGCGACCCAGACCGGTTCAAATCGGTTAAAGATAACATATTTCTTGTGAGGGATAGAGAGGAGAGAGAAAGAGAGGGGCAGAAACCGGTCCGGTTCGATCCGCTGAGTGAGTTTCCAGAGAACTGCCCGCCGGGAGGGGCGGAGACGGTGGTTCTATATACGACGTCACTGAGGGGCGTACGGCGGACGTTTGAGGACTGTAACAGAGTGAAGTCGGTGCTGGAGTTGCAGCAGGTGGTCGTCGACGAGCGTGACGTGGCGTTGCACGGCGAGTTTTTGAAGGAACTCAAGGAGTTGCTCGGAGACGAGGCGACGGTGCCGAGGATGTTTGTGAAGGGAAGGTAAGTTAAATTACCACTAATTCACTAAACTCTTTTGAACTAAATATATTTTTGTCACTAATTTGTTTTGTGTTAGAAATATTTAATTTGGTTGTTTACATGTGTTAATTATGTTTTTTTTTTTTTTCATGAGTGGCTTACAAAATTATAATTAGTCGATGATGAGTTACTTCACATAATCTTAAGTTTGGTCTAGTAAAATTTTGGTAATAATTTTGTTTTTTGTTTTTTATTTTTGAAAATTAAATTATTTCTTCCACATTTTTTATAATGATTTGCATATATTTTAAGTACAATGGTTGAATTCTTAGTCAAATTCCAAAATCAAAAGCAAATTTTTAAAAGTTATTTTTTTTAGTTTTCAGAATTTGACTTAGTTTTTTAAATTGTTGGTAAAAACTAGACAACAAAAGAAGAAATTTGGAGGTGAAAATAGTGTTTATATGTTTAATTTTAAAAAATATAAATATATAAATAAATGTAGACCAAAAGGGTGATTTTTTTTTCTGCTTTTAAAATTTATGTTTGATTTTCACGTTACGAAAACTACTCACTTATGTCAACACTTGAATTCTTATTCAAATTCTCAAACAAAAACAAGTTTTTGAAGACTAGTCAACTTGATTTGAAAATATTACAAAGAGTCATTAACAAAAACTAAGAAACTTAGAGGTAAAATTAGTGTTTGTAAACTTAATTTTTAAGAATTTAGACAAAAACTATACTAATTTGACCCAAAAAAGAAAAAAAAATCTCTTAAAAATTTTGGAGGTAAATGATGAGTTTTCATCTTTTGAGTTGCTAGATATTTTCATAGTACTAGGTTAGTTTGATTATTAAGTGATTTTAACATTTGTTGTGAAATAAGATATAAATGAAGAGTCTTTAAAATGTAAGAAAAAACTAGATCTGCTATTAAAGAATGAGGATTGAATTGAGAAAATATTTTAGCCTTTATTTATTTATTTGTATTTTTACTATTTCACGTGCATCTTTAAAAAAATATATATATTATTCCTCACTCATTCTCGAACTTCAAAATTAGTACAAGTTCTAATAAGTGATTATTAACACTAGTAATTGAGAAGGAAGTGACATTATAGGATTTGTACTCATGTTTTGAAACTATGTTTAATCACGAACTAAACTCGACAATTTAAACCGATAGATAAGACAAATTTAATTATTTTTAACAGATATATCGGAGGGGCAGATGAGGTAGTGGTACTAAACGAGATGGGAAAGCTTCGGAGAATACTGCGACAAGCAGCGGTGGAGACTGGAGCAGGTCGTCAAGGGTGTGAAGGGTGCGGTGGAGCGAGATTTGTGCCATGTTTGGAGTGTGGAGGGAGCTGCAAAGTGATAAAAGGAGAAACAAAAGAGAGATGTGGAGCTTGTAATGAGAATGGTTTGGCCCATTGCCCTGCCTGTCATTGAAACAAATCCTTGATGGCAAAGAATAATGGAGGAAGATGATGAATTTGAAACTGCATTTTTATACTTGTGTGTTTTTCAATGTAATTTATACTTGAAAATGCTTTTGGAATTGGGGTGTTTGGATGAAGGGAAATGGAAGAGAATATTGTGAAATAAGAGGAGGGAGGGGAATTACACAATGATCAACTTTAAGTGATGGGATCATGTGACCTTCTTGTTAGATTATTGTAAAAAATTTCAACACTTGTTTATATGGTTTCAATCTATGGTTTAGATTTAGAATTATTTTTTCTGTGATTTTTTTTGTTTTCAATTTTCAATTTGATCCACATAAATTAAATAATTGTTTTTAGTTATAAATGAGCATGAGTATAATCAATTTTTATTTTATTTTTTTCTCGCTCCTCTCTAATCATGCATATTCGTAAAAGAGATGATTAGAAAAAACTAAAGAAATAAGATGAAAAGTTACTATCAACTAAAGGTGAGGATATAATGGACATTTATTGAAGAGTAAGGGGCAAAATGGAGAGATGGGAAGGTAAAGGCTCCCTCGTCATAGCACCTTTTATATATAGTATAGACATAGATTATCATTATTTTTTAAAGTTCACGTGGTGGAGAATCTAACTATTGACTATTGGAATATGATCATGGATGTCTTATTTATTGAGGCTATGCTCAAACATATTCATTTAGATAAGCTCAAGGTTTAAAATGTCGACAACAGAAATGCCAAAATTTCAATTTAATGGAAATGTTAACGAAAATATCAAAATGGCAATGTTGATGAATATTTATAGAAAAACAACCAAAACGAAAAAATCAAATAAAACTATTTAAATTGATAAATAAACATTTCATATTTTCTAAACAAGGTTTTTTTTTTTT AAAAAAAAAAAAATTCCTATACCCCGCTGCCGGAAAGTTCATCGACGGCAATGGGGTGCTCCTCTTCGAAGCGAATCGAGGCCACTGTCGACGTATACCGTCCAGCGCCGGCGAGCTTTGCGGTTTTTGACATAAACGCCATAGAGGAGCCTTGGGTTAAAGTCATGGATGAGCAACCGCCACCACCCACGGCGGACCCGGTAAAGGAGGAGAAATCGGCGATTGTTCCGGTTCCGATTCTGGAGAAGCTCAGTAGTTTCGAGTCTGAAGCTCCTCATTCGTGGGATGAGGTGAGTAAAGCCCTTGAAGATCTCAAACCTGCTCTCCGCCCGGTTACAGAACCACCGCCGACGAAACCCCCTGCCATCGCCACCACCGCCGCCGTCGTTGCTAAACAGCCCCCACGTAAGAGCTCGAGTTTCCACACAGTGGCAGAGCTCGACGCCAAGTTGTCGCCCTCCGCCAAGCCGGCCGCCGAGTCTAAGCCTTCAGTGTTGAGAAAAGCGGCGTCTGTTAGACCCGGACCGGAAAAACCCGAGCCAAAAACCGGCGACCCAGACCGGTTCAAATCGGTTAAAGATAACATATTTCTTGTGAGGGATAGAGAGGAGAGAGAAAGAGAGGGGCAGAAACCGGTCCGGTTCGATCCGCTGAGTGAGTTTCCAGAGAACTGCCCGCCGGGAGGGGCGGAGACGGTGGTTCTATATACGACGTCACTGAGGGGCGTACGGCGGACGTTTGAGGACTGTAACAGAGTGAAGTCGGTGCTGGAGTTGCAGCAGGTGGTCGTCGACGAGCGTGACGTGGCGTTGCACGGCGAGTTTTTGAAGGAACTCAAGGAGTTGCTCGGAGACGAGGCGACGGTGCCGAGGATGTTTGTGAAGGGAAGATATATCGGAGGGGCAGATGAGGTAGTGGTACTAAACGAGATGGGAAAGCTTCGGAGAATACTGCGACAAGCAGCGGTGGAGACTGGAGCAGGTCGTCAAGGGTGTGAAGGGTGCGGTGGAGCGAGATTTGTGCCATGTTTGGAGTGTGGAGGGAGCTGCAAAGTGATAAAAGGAGAAACAAAAGAGAGATGTGGAGCTTGTAATGAGAATGGTTTGGCCCATTGCCCTGCCTGTCATTGAAACAAATCCTTGATGGCAAAGAATAATGGAGGAAGATGATGAATTTGAAACTGCATTTTTATACTTGTGTGTTTTTCAATGTAATTTATACTTGAAAATGCTTTTGGAATTGGGGTGTTTGGATGAAGGGAAATGGAAGAGAATATTGTGAAATAAGAGGAGGGAGGGGAATTACACAATGATCAACTTTAAGTGATGGGATCATGTGACCTTCTTGTTAGATTATTGTAAAAAATTTCAACACTTGTTTATATGGTTTCAATCTATGGTTTAGATTTAGAATTATTTTTTCTGTGATTTTTTTTGTTTTCAATTTTCAATTTGATCCACATAAATTAAATAATTGTTTTTAGTTATAAATGAGCATGAGTATAATCAATTTTTATTTTATTTTTTTCTCGCTCCTCTCTAATCATGCATATTCGTAAAAGAGATGATTAGAAAAAACTAAAGAAATAAGATGAAAAGTTACTATCAACTAAAGGTGAGGATATAATGGACATTTATTGAAGAGTAAGGGGCAAAATGGAGAGATGGGAAGGTAAAGGCTCCCTCGTCATAGCACCTTTTATATATAGTATAGACATAGATTATCATTATTTTTTAAAGTTCACGTGGTGGAGAATCTAACTATTGACTATTGGAATATGATCATGGATGTCTTATTTATTGAGGCTATGCTCAAACATATTCATTTAGATAAGCTCAAGGTTTAAAATGTCGACAACAGAAATGCCAAAATTTCAATTTAATGGAAATGTTAACGAAAATATCAAAATGGCAATGTTGATGAATATTTATAGAAAAACAACCAAAACGAAAAAATCAAATAAAACTATTTAAATTGATAAATAAACATTTCATATTTTCTAAACAAGGTTTTTTTTTTTT ATGGGGTGCTCCTCTTCGAAGCGAATCGAGGCCACTGTCGACGTATACCGTCCAGCGCCGGCGAGCTTTGCGGTTTTTGACATAAACGCCATAGAGGAGCCTTGGGTTAAAGTCATGGATGAGCAACCGCCACCACCCACGGCGGACCCGGTAAAGGAGGAGAAATCGGCGATTGTTCCGGTTCCGATTCTGGAGAAGCTCAGTAGTTTCGAGTCTGAAGCTCCTCATTCGTGGGATGAGGTGAGTAAAGCCCTTGAAGATCTCAAACCTGCTCTCCGCCCGGTTACAGAACCACCGCCGACGAAACCCCCTGCCATCGCCACCACCGCCGCCGTCGTTGCTAAACAGCCCCCACGTAAGAGCTCGAGTTTCCACACAGTGGCAGAGCTCGACGCCAAGTTGTCGCCCTCCGCCAAGCCGGCCGCCGAGTCTAAGCCTTCAGTGTTGAGAAAAGCGGCGTCTGTTAGACCCGGACCGGAAAAACCCGAGCCAAAAACCGGCGACCCAGACCGGTTCAAATCGGTTAAAGATAACATATTTCTTGTGAGGGATAGAGAGGAGAGAGAAAGAGAGGGGCAGAAACCGGTCCGGTTCGATCCGCTGAGTGAGTTTCCAGAGAACTGCCCGCCGGGAGGGGCGGAGACGGTGGTTCTATATACGACGTCACTGAGGGGCGTACGGCGGACGTTTGAGGACTGTAACAGAGTGAAGTCGGTGCTGGAGTTGCAGCAGGTGGTCGTCGACGAGCGTGACGTGGCGTTGCACGGCGAGTTTTTGAAGGAACTCAAGGAGTTGCTCGGAGACGAGGCGACGGTGCCGAGGATGTTTGTGAAGGGAAGATATATCGGAGGGGCAGATGAGGTAGTGGTACTAAACGAGATGGGAAAGCTTCGGAGAATACTGCGACAAGCAGCGGTGGAGACTGGAGCAGGTCGTCAAGGGTGTGAAGGGTGCGGTGGAGCGAGATTTGTGCCATGTTTGGAGTGTGGAGGGAGCTGCAAAGTGATAAAAGGAGAAACAAAAGAGAGATGTGGAGCTTGTAATGAGAATGGTTTGGCCCATTGCCCTGCCTGTCATTGA MGCSSSKRIEATVDVYRPAPASFAVFDINAIEEPWVKVMDEQPPPPTADPVKEEKSAIVPVPILEKLSSFESEAPHSWDEVSKALEDLKPALRPVTEPPPTKPPAIATTAAVVAKQPPRKSSSFHTVAELDAKLSPSAKPAAESKPSVLRKAASVRPGPEKPEPKTGDPDRFKSVKDNIFLVRDREEREREGQKPVRFDPLSEFPENCPPGGAETVVLYTTSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDEATVPRMFVKGRYIGGADEVVVLNEMGKLRRILRQAAVETGAGRQGCEGCGGARFVPCLECGGSCKVIKGETKERCGACNENGLAHCPACH Homology
BLAST of Clc01G01800 vs. NCBI nr
Match: XP_038907226.1 (uncharacterized protein LOC120093006 [Benincasa hispida]) HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186 Identity = 337/359 (93.87%), Postives = 345/359 (96.10%), Query Frame = 0
BLAST of Clc01G01800 vs. NCBI nr
Match: KAA0042669.1 (Glutaredoxin domain-containing protein [Cucumis melo var. makuwa] >TYK06072.1 Glutaredoxin domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 652.9 bits (1683), Expect = 1.6e-183 Identity = 331/361 (91.69%), Postives = 342/361 (94.74%), Query Frame = 0
BLAST of Clc01G01800 vs. NCBI nr
Match: XP_008437411.1 (PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo]) HSP 1 Score: 650.2 bits (1676), Expect = 1.0e-182 Identity = 331/361 (91.69%), Postives = 341/361 (94.46%), Query Frame = 0
BLAST of Clc01G01800 vs. NCBI nr
Match: XP_004143951.1 (uncharacterized protein LOC101208965 [Cucumis sativus] >KGN50006.1 hypothetical protein Csa_000194 [Cucumis sativus]) HSP 1 Score: 649.8 bits (1675), Expect = 1.4e-182 Identity = 330/361 (91.41%), Postives = 341/361 (94.46%), Query Frame = 0
BLAST of Clc01G01800 vs. NCBI nr
Match: XP_022958024.1 (uncharacterized protein LOC111459378 [Cucurbita moschata] >KAG7035498.1 hypothetical protein SDJN02_02294 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 574.3 bits (1479), Expect = 7.2e-160 Identity = 297/365 (81.37%), Postives = 318/365 (87.12%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy Swiss-Prot
Match: Q9FLE8 (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana OX=3702 GN=At5g39865 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.5e-30 Identity = 73/166 (43.98%), Postives = 102/166 (61.45%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy Swiss-Prot
Match: Q9LH89 (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana OX=3702 GN=At3g28850 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.6e-29 Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy Swiss-Prot
Match: A8MXD5 (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens OX=9606 GN=GRXCR1 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.6e-21 Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy Swiss-Prot
Match: Q50H32 (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Grxcr1 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.8e-21 Identity = 57/154 (37.01%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy Swiss-Prot
Match: Q9W4S1 (Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster OX=7227 GN=CG12206 PE=2 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 9.0e-20 Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy TrEMBL
Match: A0A5D3C4A9 (Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001730 PE=4 SV=1) HSP 1 Score: 652.9 bits (1683), Expect = 7.8e-184 Identity = 331/361 (91.69%), Postives = 342/361 (94.74%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy TrEMBL
Match: A0A1S3AU29 (uncharacterized protein LOC103482835 OS=Cucumis melo OX=3656 GN=LOC103482835 PE=4 SV=1) HSP 1 Score: 650.2 bits (1676), Expect = 5.0e-183 Identity = 331/361 (91.69%), Postives = 341/361 (94.46%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy TrEMBL
Match: A0A0A0KQR0 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G148770 PE=4 SV=1) HSP 1 Score: 649.8 bits (1675), Expect = 6.6e-183 Identity = 330/361 (91.41%), Postives = 341/361 (94.46%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy TrEMBL
Match: A0A6J1H3T8 (uncharacterized protein LOC111459378 OS=Cucurbita moschata OX=3662 GN=LOC111459378 PE=4 SV=1) HSP 1 Score: 574.3 bits (1479), Expect = 3.5e-160 Identity = 297/365 (81.37%), Postives = 318/365 (87.12%), Query Frame = 0
BLAST of Clc01G01800 vs. ExPASy TrEMBL
Match: A0A411D4A2 (Glutaredoxin domain-containing protein OS=Cucurbita pepo OX=3663 PE=2 SV=1) HSP 1 Score: 569.7 bits (1467), Expect = 8.6e-159 Identity = 294/365 (80.55%), Postives = 316/365 (86.58%), Query Frame = 0
BLAST of Clc01G01800 vs. TAIR 10
Match: AT1G64500.1 (Glutaredoxin family protein ) HSP 1 Score: 309.3 bits (791), Expect = 4.0e-84 Identity = 195/379 (51.45%), Postives = 244/379 (64.38%), Query Frame = 0
BLAST of Clc01G01800 vs. TAIR 10
Match: AT5G06470.1 (Glutaredoxin family protein ) HSP 1 Score: 162.2 bits (409), Expect = 8.0e-40 Identity = 86/193 (44.56%), Postives = 115/193 (59.59%), Query Frame = 0
BLAST of Clc01G01800 vs. TAIR 10
Match: AT5G03870.1 (Glutaredoxin family protein ) HSP 1 Score: 158.7 bits (400), Expect = 8.8e-39 Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of Clc01G01800 vs. TAIR 10
Match: AT1G32760.1 (Glutaredoxin family protein ) HSP 1 Score: 149.8 bits (377), Expect = 4.1e-36 Identity = 86/183 (46.99%), Postives = 112/183 (61.20%), Query Frame = 0
BLAST of Clc01G01800 vs. TAIR 10
Match: AT4G10630.1 (Glutaredoxin family protein ) HSP 1 Score: 144.1 bits (362), Expect = 2.3e-34 Identity = 110/300 (36.67%), Postives = 152/300 (50.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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