Cla97C11G218880 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGGAGGAGAACAATGTTGCCTGGTTTTCCTGAAAATGGAAGAGGTGAGGAATTGTTAACTGAAAATGTTGCTGTTGATGTTTCTTTACATTGAATGCCTCACTTCTTTTTTTAGTTCTAACTCGGCCAAGATGATTATTTAGTAGTAAAAGTCTTAGGTGTGGAGAAATTTCGACCCGATGCTATATTCATTCTATAAACTGCTCGATTAAGTTCCTTCGGGGTGGAAAATTTCAGGAGAAATTGTTTTTAATTTGACTAGTCTTAGAAATGTAACTTGTTTATAAAATTGCTAGTTCTGAAGTTTCTTGGTGGGTTATTGCAAAGAACAAGAAAATCAAGTCAAGGATTTCTTAGTAATTTCTTGTATTATCCTGTTTTACATTCTCGAGACAACCTCTTTTTTCCTGACTAAATACTAAATGCATGTTTGGAGTGATTTAAAAATGAAAAATCACTTTTGTGTGATGCTCAATTCAAAATATGCATTTAATCATCGCTTCAAAATTGATTTTGAATGATTCAATGCATTTTCAAAATGATTATTGATTTAGAATACGACAAAAGTGATTTTAACCATTTCAAAATCACTCTCAAACATATCCTAAAGTTTTGACAATGATTTTGTTAGCTGATTATGAGGAGGCCTTAAATGACTTTCTCTGCCCACAAATGGTAAATGATGCAATCCAAGCAGAAAAGGCGTTCATCTTCTCTTCCCCTGGGATGCCAGCTTTAGCCTTTTTGGAGGAGGTAGCAGAATCAGTTCATGAGAATGACATATATTGTGTTACTCCTCTCCAACGCTTGATTAAAATGGTGTGTTCGAAAAGATTTTTCAGTTTCATTTCTCGTAAGAAAAAATTGTTATGTGCATTATAGAAATGCTGTTCTTGGCTCAATCTCAGGTAAACGAAATGTCACCTAATGCATTAAGTGCTTCTGTCAGTGACATAGATTCTCTTGTCTGTATGACCGATAGAGTACCTTCATTGGCGCCTCTTAACAACTCCAAAGCTGCAGTTAGCACGGATTTTGTGGGTGCAGATGCATTTCCTCTGAGAAGAATATATTCGAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGACACTATAAACGTTTGATGGATTGTGAAGGTTTTGACTTCAATTCAAGAACAATCGAGGTGTGTGACCATCTATTTAGTTAGTTTTTCTTTTCCTTTTCTTTTTTTTCTTTTTTTTTTTTTTTAGCTCATTAATTTTGAAGGGTGGAAATTCAAATCATCAACTTTTGGGATGGTAATCAGTGACTTATTCACTAAATTATGCTTGGATTAGTGACCATCTCCTTGGTTTATGATGTGGTTCTAACCTGAAAAGATGAAATTATGTGAGTGAACAAAATAAGCACTTTGGGGCAAATATGATCATGAACATTCCTGATTAGTAATATCTTTGAGCTTAATTTTGATAATTTTCCTAAAGATTCTGTTTAATTAATATTTGAGAAAATATAGTGTGAAGCACTTTTACTCATCAATGTGAAATTATCTTTCCACGTCAAATGAGGTTAAAAAGATCCATTGAGATGATAATGTTGAGAAGATCCTTTATTTTATTTGATACATCTCGAGTCTTGACTAGTATGTTTAGAATCGGTATTTGAAGGATAACATGTATGAAAAATTATAATGGCTAAATTATATATATCCCAATTCTTTCAAAAGTTACAATATTACCCTTTACCTTTCATAAACATTGCAAAAGTACTCTTAGAGTAGAATTCCTCCCGAATTTCAAAAGGAAATGGATATGTCAAATAGTGTGGTAGTGACCTATGACGTTGTGGTGATACTAATTTCCATTTTAGGTCACTAGTAGACCATTTCAAACCACAATTTCCATCAAAAGTAAGAATTTGCACTCTAAAGATAGGGTTGAAAGGTTTATGAGAGGTCAAGCGTACTATTGTAATATTGTAACTTTGGAAAGAATAAGGTTATTTTTTTAATATGGGAAAGAGTTCATTGTCTTTTTTTTTTTTTTGGATGTAGCCTTATAATATCTGTTGTTATAAGTTATAATTAACTGATTACCAAGTCTTGTAGTATCAAACTACTTTGTTCAATGTCAAATAGATTCTTTGTAAACTTTCTATTATTAACGACATATTTCTTTGATATATTCTTTCAAATACATCTGTTAATACAGACTCCTGATAATTCACATTGGCATGGGTTTTCATTGCTGGCGAAACAATCTTTATTTGAAGAAATTAGGAGGATTAATGAGCAGCTGATTGATACAGTGGTGTCTGTTTGTGACAAAGATACGATAGCAACTGATCCTGCCGCTACAATTGACAGAAGTGAAGGGATCATAGTTAAATGTTCTTTTGTTGCCCATTCAAATTTAACCTCACACCAAACTTCAGCTCTTCAGGTACTTGAGCCAATTTTTTTTTTTAATACATCATTTTAAATAGTATCTTGGTTCTCGTACTTTTGGCTTTGATTCATTTGGTTCTTGTATTTTTTACTTTGATTCATTGGGTTCATGTACTGTTGAAATGATTATTTTGTTTTCGTCCCTATAGTTTTAATTTTGACTTATTTTGGTTCTTATACTTTTAAAATATAATCTCGTTCCTTTTTTTTTTCTATTGAAAATTTAGTGTAACACCTTTGTATTTAAGAGATTCCATTATGTTGAAATTAATATTAAAATTTTGAAAATAGGGACAAAAATGGTCACTATCTAAAAGCATGGAGACTAAAATGGACGTTTAGAAGATATGTGGACCAATATGAACAAAAATTGAGAGTAGGACCAAATTAAACTTTTTAAAAGTACAAGGACCAAAATAAATGAAAGCTAAAAGTATGACACCAAAGTAGTATTTAAACCTAGGATTAATTACTCGCTCCATCTTTCTTATTTTATTCATAAAACATGCAGTTAGCGGTGGATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCGCAAATTTCTCCAATATTCAATAAATTCCATGGGGAAGCTTGGTGAGAAGATTTATCGTTTCTCCCATTTTAATAGCAAGAATTTGCTTACAATACCACCGTCTGATTTGAATTTTATATTTGAGTTTCTTAGTTCCCTTTCAGAGTTACACTCTAATCCTTCATTTGATTTTGGCTTTTTGTTATTCATGCACTTCCAAGTCCGGCTCATGATAGATATTATTAGATGGGCCTTTTTTCGTTGTGATTTTCTAGTTTATTAGATTCATATTTTTTGAAATCTTATTAACGGAACCACAAGGAATCAAAGGGCACACACACAAGAATGTCCTACTCCGCTAACCCATAATTATTCTAGAACAAAACTTCTTCTTAAAGGATAATTATGAATAGATATATGTATGGGTGAAAATTAAAATTAATTGTAATCCAAATTTATGGTATGGTATACATCAAAAGATCTTGAATTTGAGTTGGACAACTCTGTCGATTTGGAGAGCAAAACTTGATTAATGTTGGATCTTAGGCCTTTCTATATCTCTTAGAATCAATAGGTTGGAATCTATTTGCAGACTATACAAGTTTATAAGCCATAATTAGATCACTCAATATGTTCAATTAATAACCAAAATATCATGCCTATTTTAAATTAATTCCAAATATACTGTCTTTTTGAGTTCAACATGTGGGATGGAGCAAGACTAAAGAAGACCAAAGGAGCTACAACTTGATTAATGTTAGATCTTAGGCCTTTTTAATAATCTCTTAGAATCAAAGATTTATTTTCTTCTTGAGTTCAACATACTAGTCATACTTTGAAGTGTTTTCTTTTTCTTCTTTTCTCAAATGTCTATTAGAAACACTTGTAATAGTTTTAGGAGAACTTTGCTTATAATTCATAGTTTAGTCTACTTTCAATTTTTAATTTTTTAATAATCCCAAACTGTTAGAATGCCTTTTATATGGTATTTGGCGCTCCAAATGGCCATGCACGGAGTCTCGCCAATTTGTATTTGTATTTGTGTTATTTACATTATTTGCGATTTTGACCCTAGAGTTTAGAAGGGTGCGCTAGATATACTCTCTAAGTCTACCGGCATCTCTAAATTTGTACTTTGATATCTTCTCTCTAATAAAATCTGATCTCTCCCTTTGTTTAGATGTAGCTAACACTGTTTGTGAACTACGTAAATCTCTGTGTTGATTTATCTATTGTTTATGCTTTATTGCTTTCTTTAGTTCTTGATTTCATCCATTACATATTTTATCCTTCCTTATAATCTCACCTTTTTTTTTTCAGTCCAACAGGTTGTGAAGACCTAACGTTGCAGTCAAGGGAAAAGTTCAACATGTCTGTCCGAAGCCTTGCGCATCCGTTCTCTATTAGTCAAGTGGCTAGGATATGGGATGTGTGTGCTCGAGACGTTGTTTTGGAGTATGCTCGACGTAACGGTGGTGGTAGTTTTAGTTCAAAGTATGGCTCGTGGGAGGACTGTCTTCATGCTGCTTGGTCATAA ATGAAAAGGAGGAGAACAATGTTGCCTGGTTTTCCTGAAAATGGAAGAGCTGATTATGAGGAGGCCTTAAATGACTTTCTCTGCCCACAAATGGTAAATGATGCAATCCAAGCAGAAAAGGCGTTCATCTTCTCTTCCCCTGGGATGCCAGCTTTAGCCTTTTTGGAGGAGGTAGCAGAATCAGTTCATGAGAATGACATATATTGTGTTACTCCTCTCCAACGCTTGATTAAAATGGTAAACGAAATGTCACCTAATGCATTAAGTGCTTCTGTCAGTGACATAGATTCTCTTGTCTGTATGACCGATAGAGTACCTTCATTGGCGCCTCTTAACAACTCCAAAGCTGCAGTTAGCACGGATTTTGTGGGTGCAGATGCATTTCCTCTGAGAAGAATATATTCGAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGACACTATAAACGTTTGATGGATTGTGAAGGTTTTGACTTCAATTCAAGAACAATCGAGACTCCTGATAATTCACATTGGCATGGGTTTTCATTGCTGGCGAAACAATCTTTATTTGAAGAAATTAGGAGGATTAATGAGCAGCTGATTGATACAGTGGTGTCTGTTTGTGACAAAGATACGATAGCAACTGATCCTGCCGCTACAATTGACAGAAGTGAAGGGATCATAGTTAAATGTTCTTTTGTTGCCCATTCAAATTTAACCTCACACCAAACTTCAGCTCTTCAGTTAGCGGTGGATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCGCAAATTTCTCCAATATTCAATAAATTCCATGGGGAAGCTTGTCCAACAGGTTGTGAAGACCTAACGTTGCAGTCAAGGGAAAAGTTCAACATGTCTGTCCGAAGCCTTGCGCATCCGTTCTCTATTAGTCAAGTGGCTAGGATATGGGATGTGTGTGCTCGAGACGTTGTTTTGGAGTATGCTCGACGTAACGGTGGTGGTAGTTTTAGTTCAAAGTATGGCTCGTGGGAGGACTGTCTTCATGCTGCTTGGTCATAA ATGAAAAGGAGGAGAACAATGTTGCCTGGTTTTCCTGAAAATGGAAGAGCTGATTATGAGGAGGCCTTAAATGACTTTCTCTGCCCACAAATGGTAAATGATGCAATCCAAGCAGAAAAGGCGTTCATCTTCTCTTCCCCTGGGATGCCAGCTTTAGCCTTTTTGGAGGAGGTAGCAGAATCAGTTCATGAGAATGACATATATTGTGTTACTCCTCTCCAACGCTTGATTAAAATGGTAAACGAAATGTCACCTAATGCATTAAGTGCTTCTGTCAGTGACATAGATTCTCTTGTCTGTATGACCGATAGAGTACCTTCATTGGCGCCTCTTAACAACTCCAAAGCTGCAGTTAGCACGGATTTTGTGGGTGCAGATGCATTTCCTCTGAGAAGAATATATTCGAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGACACTATAAACGTTTGATGGATTGTGAAGGTTTTGACTTCAATTCAAGAACAATCGAGACTCCTGATAATTCACATTGGCATGGGTTTTCATTGCTGGCGAAACAATCTTTATTTGAAGAAATTAGGAGGATTAATGAGCAGCTGATTGATACAGTGGTGTCTGTTTGTGACAAAGATACGATAGCAACTGATCCTGCCGCTACAATTGACAGAAGTGAAGGGATCATAGTTAAATGTTCTTTTGTTGCCCATTCAAATTTAACCTCACACCAAACTTCAGCTCTTCAGTTAGCGGTGGATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCGCAAATTTCTCCAATATTCAATAAATTCCATGGGGAAGCTTGTCCAACAGGTTGTGAAGACCTAACGTTGCAGTCAAGGGAAAAGTTCAACATGTCTGTCCGAAGCCTTGCGCATCCGTTCTCTATTAGTCAAGTGGCTAGGATATGGGATGTGTGTGCTCGAGACGTTGTTTTGGAGTATGCTCGACGTAACGGTGGTGGTAGTTTTAGTTCAAAGTATGGCTCGTGGGAGGACTGTCTTCATGCTGCTTGGTCATAA MKRRRTMLPGFPENGRADYEEALNDFLCPQMVNDAIQAEKAFIFSSPGMPALAFLEEVAESVHENDIYCVTPLQRLIKMVNEMSPNALSASVSDIDSLVCMTDRVPSLAPLNNSKAAVSTDFVGADAFPLRRIYSRFGGTIGSRRTRHYKRLMDCEGFDFNSRTIETPDNSHWHGFSLLAKQSLFEEIRRINEQLIDTVVSVCDKDTIATDPAATIDRSEGIIVKCSFVAHSNLTSHQTSALQLAVDPLKLLVPKGYPQISPIFNKFHGEACPTGCEDLTLQSREKFNMSVRSLAHPFSISQVARIWDVCARDVVLEYARRNGGGSFSSKYGSWEDCLHAAWS Homology
BLAST of Cla97C11G218880 vs. NCBI nr
Match: XP_038891682.1 (mediator of RNA polymerase II transcription subunit 15a-like [Benincasa hispida]) HSP 1 Score: 590.5 bits (1521), Expect = 9.3e-165 Identity = 302/346 (87.28%), Postives = 308/346 (89.02%), Query Frame = 0
BLAST of Cla97C11G218880 vs. NCBI nr
Match: XP_022984739.1 (mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita maxima]) HSP 1 Score: 488.0 bits (1255), Expect = 6.5e-134 Identity = 251/351 (71.51%), Postives = 280/351 (79.77%), Query Frame = 0
BLAST of Cla97C11G218880 vs. NCBI nr
Match: XP_022956517.1 (mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata] >XP_022956518.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata]) HSP 1 Score: 486.5 bits (1251), Expect = 1.9e-133 Identity = 251/348 (72.13%), Postives = 277/348 (79.60%), Query Frame = 0
BLAST of Cla97C11G218880 vs. NCBI nr
Match: KAG6601093.1 (Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 483.4 bits (1243), Expect = 1.6e-132 Identity = 250/348 (71.84%), Postives = 276/348 (79.31%), Query Frame = 0
BLAST of Cla97C11G218880 vs. NCBI nr
Match: XP_023526658.1 (mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo] >XP_023526666.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 479.2 bits (1232), Expect = 3.0e-131 Identity = 249/351 (70.94%), Postives = 277/351 (78.92%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy Swiss-Prot
Match: F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.8e-39 Identity = 110/303 (36.30%), Postives = 158/303 (52.15%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy Swiss-Prot
Match: Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.2e-27 Identity = 85/290 (29.31%), Postives = 143/290 (49.31%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy Swiss-Prot
Match: F4I169 (Probable mediator of RNA polymerase II transcription subunit 15b OS=Arabidopsis thaliana OX=3702 GN=MED15B PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 6.6e-04 Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy TrEMBL
Match: A0A6J1JBE6 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita maxima OX=3661 GN=LOC111482923 PE=4 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 3.2e-134 Identity = 251/351 (71.51%), Postives = 280/351 (79.77%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy TrEMBL
Match: A0A6J1GWK1 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita moschata OX=3662 GN=LOC111458234 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 9.2e-134 Identity = 251/348 (72.13%), Postives = 277/348 (79.60%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy TrEMBL
Match: A0A6J1CCM7 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010000 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 1.2e-120 Identity = 238/360 (66.11%), Postives = 267/360 (74.17%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy TrEMBL
Match: A0A6J1CEI3 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010000 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84 Identity = 184/290 (63.45%), Postives = 204/290 (70.34%), Query Frame = 0
BLAST of Cla97C11G218880 vs. ExPASy TrEMBL
Match: A0A1R3G8S8 (Putative transcription cofactor OS=Corchorus capsularis OX=210143 GN=CCACVL1_27779 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52 Identity = 137/331 (41.39%), Postives = 188/331 (56.80%), Query Frame = 0
BLAST of Cla97C11G218880 vs. TAIR 10
Match: AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). ) HSP 1 Score: 164.1 bits (414), Expect = 2.0e-40 Identity = 110/303 (36.30%), Postives = 158/303 (52.15%), Query Frame = 0
BLAST of Cla97C11G218880 vs. TAIR 10
Match: AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). ) HSP 1 Score: 126.7 bits (317), Expect = 3.6e-29 Identity = 85/289 (29.41%), Postives = 140/289 (48.44%), Query Frame = 0
BLAST of Cla97C11G218880 vs. TAIR 10
Match: AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). ) HSP 1 Score: 123.6 bits (309), Expect = 3.0e-28 Identity = 85/290 (29.31%), Postives = 143/290 (49.31%), Query Frame = 0
BLAST of Cla97C11G218880 vs. TAIR 10
Match: AT1G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 4.7e-05 Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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